AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005030.t1 MTR_1g079380 89.219 269 27 1 1 269 1 267 1.43e-165 460
MS.gene005030.t1 MTR_1g079370 82.772 267 44 1 1 267 1 265 1.12e-162 452
MS.gene005030.t1 MTR_1g079180 72.963 270 65 3 1 267 1 265 6.08e-144 404
MS.gene005030.t1 MTR_1g079460 69.597 273 76 3 1 270 1 269 2.27e-133 378
MS.gene005030.t1 MTR_1g079260 67.509 277 81 3 1 270 1 275 2.30e-133 378
MS.gene005030.t1 MTR_1g079200 69.145 269 76 4 1 267 1 264 1.52e-131 373
MS.gene005030.t1 MTR_1g100597 67.626 278 79 3 1 270 1 275 1.11e-130 371
MS.gene005030.t1 MTR_1g079230 62.455 277 96 2 1 270 1 276 4.76e-121 347
MS.gene005030.t1 MTR_1g079850 61.538 286 92 4 1 270 1 284 9.48e-117 336
MS.gene005030.t1 MTR_1g100613 67.347 245 68 2 15 248 1 244 3.78e-113 326
MS.gene005030.t1 MTR_3g452600 62.593 270 89 6 4 270 10 270 1.62e-109 317
MS.gene005030.t1 MTR_1g079250 60.638 282 98 5 1 270 1 281 2.11e-107 313
MS.gene005030.t1 MTR_1g026510 55.401 287 110 6 1 270 1 286 3.98e-102 300
MS.gene005030.t1 MTR_3g006850 55.700 307 91 6 4 270 17 318 2.82e-101 298
MS.gene005030.t1 MTR_1g079410 54.815 270 112 4 4 267 8 273 1.57e-97 287
MS.gene005030.t1 MTR_3g450990 56.643 286 96 8 4 270 10 286 1.77e-97 287
MS.gene005030.t1 MTR_2g079100 59.696 263 94 3 4 264 9 261 2.90e-97 286
MS.gene005030.t1 MTR_1g079350 55.596 277 111 6 1 267 1 275 6.87e-94 278
MS.gene005030.t1 MTR_1g079140 49.664 298 114 6 3 267 12 306 2.63e-91 273
MS.gene005030.t1 MTR_1g079340 53.082 292 106 9 1 267 40 325 1.20e-84 256
MS.gene005030.t1 MTR_1g078470 66.486 185 51 4 83 267 11 184 1.75e-80 241
MS.gene005030.t1 MTR_7g096300 54.980 251 98 5 1 245 1 242 1.28e-79 255
MS.gene005030.t1 MTR_1g079400 45.965 285 116 5 4 267 12 279 3.48e-75 230
MS.gene005030.t1 MTR_7g112550 43.158 285 139 8 2 268 5 284 4.27e-67 210
MS.gene005030.t1 MTR_1g079240 59.016 183 62 4 85 267 10 179 5.65e-61 191
MS.gene005030.t1 MTR_1g083580 39.643 280 151 8 2 267 6 281 1.36e-58 188
MS.gene005030.t1 MTR_7g112560 37.879 264 151 7 7 267 4 257 1.39e-52 172
MS.gene005030.t1 MTR_1g076870 61.194 134 36 1 128 245 2 135 1.88e-49 160
MS.gene005030.t1 MTR_4g023570 36.364 264 135 8 7 267 4 237 2.87e-46 155
MS.gene005030.t1 MTR_1g079130 46.154 195 71 5 101 267 1 189 5.99e-46 153
MS.gene005030.t1 MTR_1g079350 50.898 167 71 4 1 159 1 164 1.93e-45 152
MS.gene005030.t1 MTR_1g079210 56.800 125 38 2 129 239 7 129 2.34e-38 131
MS.gene005030.t1 MTR_7g096310 50.000 154 61 4 38 185 19 162 3.54e-36 127
MS.gene005030.t1 MTR_1g078460 68.889 90 28 0 1 90 64 153 1.16e-35 125
MS.gene005030.t1 MTR_3g058640 61.765 102 37 1 128 229 7 106 3.53e-35 122
MS.gene005030.t1 MTR_2g042540 60.000 105 40 2 1 103 1 105 3.18e-34 120
MS.gene005030.t1 MTR_7g103380 27.143 280 172 8 4 266 19 283 1.59e-26 105
MS.gene005030.t1 MTR_0113s0040 34.731 167 102 4 2 165 20 182 1.46e-24 99.8
MS.gene005030.t1 MTR_1g079220 71.642 67 17 1 165 231 1 65 2.87e-24 93.2
MS.gene005030.t1 MTR_0002s0020 33.728 169 102 3 4 165 22 187 1.72e-22 94.4
MS.gene005030.t1 MTR_1g101390 35.762 151 94 2 2 150 26 175 8.24e-22 92.4
MS.gene005030.t1 MTR_4g083970 28.947 190 112 5 80 267 122 290 1.14e-21 92.0
MS.gene005030.t1 MTR_5g010800 32.948 173 105 6 2 169 15 181 1.16e-21 92.0
MS.gene005030.t1 MTR_4g102770 34.694 147 92 2 4 147 19 164 3.68e-20 87.8
MS.gene005030.t1 MTR_1g079390 65.385 52 14 2 211 262 8 55 1.18e-16 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005030.t1 AT2G02360 46.008 263 128 6 7 266 17 268 2.76e-77 236
MS.gene005030.t1 AT1G80110 45.076 264 135 6 4 266 1 255 1.93e-69 215
MS.gene005030.t1 AT2G02340 40.741 270 155 3 1 266 33 301 5.10e-69 216
MS.gene005030.t1 AT2G02240 42.366 262 140 6 7 266 64 316 2.68e-65 206
MS.gene005030.t1 AT2G02250 40.977 266 145 7 4 266 47 303 3.88e-63 201
MS.gene005030.t1 AT1G09155 41.281 281 142 8 7 267 3 280 2.38e-59 190
MS.gene005030.t1 AT2G02230 35.082 305 154 5 7 270 35 336 7.98e-59 191
MS.gene005030.t1 AT2G02350 39.405 269 147 7 4 266 24 282 1.62e-57 186
MS.gene005030.t1 AT1G56250 41.281 281 142 8 7 267 4 281 1.08e-54 178
MS.gene005030.t1 AT1G56240 40.714 280 143 8 7 266 4 280 1.79e-54 177
MS.gene005030.t1 AT2G02320 37.687 268 149 8 6 266 42 298 6.00e-52 172
MS.gene005030.t1 AT2G02310 33.955 268 165 6 4 267 45 304 2.83e-48 162
MS.gene005030.t1 AT2G02300 36.765 272 140 7 4 267 34 281 5.70e-46 155
MS.gene005030.t1 AT5G24560 42.632 190 96 4 6 192 5 184 3.28e-43 146
MS.gene005030.t1 AT3G53000 28.417 278 170 10 4 266 21 284 5.28e-28 109
MS.gene005030.t1 AT2G02350 36.047 172 97 6 101 266 1 165 6.34e-26 100
MS.gene005030.t1 AT3G61060 32.317 164 103 4 6 165 27 186 1.97e-22 94.4
MS.gene005030.t1 AT3G61060 32.317 164 102 5 6 165 27 185 4.90e-22 93.2
MS.gene005030.t1 AT1G12710 36.054 147 88 3 4 147 28 171 4.21e-21 90.5
MS.gene005030.t1 AT1G63090 33.333 165 102 4 4 165 26 185 7.82e-21 89.7
MS.gene005030.t1 AT5G52120 32.620 187 108 7 4 177 21 202 4.30e-18 82.4
MS.gene005030.t1 AT1G12710 35.075 134 81 3 4 134 28 158 4.78e-16 77.0
MS.gene005030.t1 AT4G19840 30.726 179 99 9 92 267 89 245 1.79e-14 71.6
MS.gene005030.t1 AT1G65390 27.174 184 109 6 89 268 249 411 8.76e-13 68.2
MS.gene005030.t1 AT1G33920 24.713 174 104 4 100 267 12 164 9.97e-13 65.1

Find 70 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGCTGCATATTGAGTATT+TGG 0.137691 1.3:+56419706 None:intergenic
TTCAAAATGATTGATGCTTA+TGG 0.231867 1.3:-56419676 MS.gene005030:CDS
CTAGATCTCTTGCCATTGTT+TGG 0.245415 1.3:-56421438 MS.gene005030:CDS
TAGATCTCTTGCCATTGTTT+GGG 0.268063 1.3:-56421437 MS.gene005030:CDS
CATCATCGATCATGATAAAA+AGG 0.287672 1.3:-56422374 MS.gene005030:intron
TCAACAAGCTTAGCGACTTC+AGG 0.333696 1.3:+56419778 None:intergenic
AAGCTGCATATTGAGTATTT+GGG 0.334659 1.3:+56419707 None:intergenic
TGCCAACATTCCTACCAAAA+AGG 0.349990 1.3:-56422428 MS.gene005030:CDS
TGATTTCTATGCCTGATTCC+AGG 0.379925 1.3:-56421390 MS.gene005030:intron
TGAGGATTACCTTCCACATT+TGG 0.380026 1.3:+56419577 None:intergenic
GAGAGTCTGCCGGCGTCAAC+TGG 0.384737 1.3:+56422553 None:intergenic
CCTCCAACTCCGACGCTGTA+TGG 0.389215 1.3:-56422504 MS.gene005030:CDS
TGAAATGAAGAGCATTCAAT+TGG 0.397092 1.3:-56421497 MS.gene005030:intron
TTAAGAGCTAACCTGGAATC+AGG 0.410946 1.3:+56421379 None:intergenic
GACAGAGATTCAGGATTTGC+CGG 0.423087 1.3:-56422611 MS.gene005030:CDS
TAGTACTAAAATTGTCTGTT+TGG 0.434481 1.3:-56419602 MS.gene005030:CDS
CTAAGCTTGTTGATGTGTGT+TGG 0.438622 1.3:-56419768 MS.gene005030:CDS
TGGAGTTGTACGAGAGACTA+TGG 0.443442 1.3:+56422573 None:intergenic
GTGTGTTGGCTTGAAATTCA+TGG 0.446205 1.3:-56419754 MS.gene005030:CDS
GTTGGTTAATTGTTATACTT+AGG 0.467370 1.3:+56419367 None:intergenic
CCATACAGCGTCGGAGTTGG+AGG 0.469088 1.3:+56422504 None:intergenic
TCATCTGTATCAGATTCATC+TGG 0.472901 1.3:+56419446 None:intergenic
CAGCCGCACAACACAGTAGT+AGG 0.476209 1.3:-56419556 MS.gene005030:CDS
ATTCCATACAGCGTCGGAGT+TGG 0.478886 1.3:+56422501 None:intergenic
CAACAAGCTTAGCGACTTCA+GGG 0.483357 1.3:+56419779 None:intergenic
AAGAGAGGTCTCGTTGTTGA+AGG 0.488523 1.3:-56419403 MS.gene005030:CDS
ATGGTGGCAATGCATCCTTC+CGG 0.489320 1.3:+56422592 None:intergenic
TGTTCTGCGGATTTATCAGT+TGG 0.493868 1.3:-56419643 MS.gene005030:CDS
CATATTGAGTATTTGGGGAC+AGG 0.495017 1.3:+56419713 None:intergenic
TGGGTGGTTGGAGATTGAGA+TGG 0.496484 1.3:-56419506 MS.gene005030:CDS
TTGTTGAAGGAATTGAAGTC+AGG 0.499615 1.3:-56419390 MS.gene005030:CDS
CGTCCTACTGTGAGAAGCGA+TGG 0.500006 1.3:-56419526 MS.gene005030:CDS
ACTACTGTGTTGTGCGGCTG+AGG 0.503355 1.3:+56419559 None:intergenic
ATGGGTGAGTTCTTCAATCC+AGG 0.510010 1.3:-56419487 MS.gene005030:CDS
GTAGGAATGTTGGCAAGGGA+AGG 0.521816 1.3:+56422436 None:intergenic
GGGGTGATGATAGACGCTAT+TGG 0.532370 1.3:-56421417 MS.gene005030:CDS
GGGTGGTTGGAGATTGAGAT+GGG 0.533715 1.3:-56419505 MS.gene005030:CDS
TGAGTGGTGGTCGTGGTGGT+TGG 0.545093 1.3:-56419426 MS.gene005030:CDS
TATCATGATCGATGATGAGA+GGG 0.554392 1.3:+56422380 None:intergenic
CGTCGGAGTTGGAGGCTGAT+CGG 0.556747 1.3:+56422512 None:intergenic
GAGATTCAGGATTTGCCGGA+AGG 0.560627 1.3:-56422607 MS.gene005030:CDS
AGATCTCTTGCCATTGTTTG+GGG 0.561132 1.3:-56421436 MS.gene005030:CDS
GGTCGTGGTGGTTGGAAGAG+AGG 0.562312 1.3:-56419418 MS.gene005030:CDS
GATTTATCAGTTGGTGTCGA+AGG 0.564414 1.3:-56419634 MS.gene005030:CDS
TGTGAGAAGCGATGGGTGGT+TGG 0.573841 1.3:-56419518 MS.gene005030:CDS
GGAAACGACGGAGAGTCTGC+CGG 0.576478 1.3:+56422543 None:intergenic
TTATCATGATCGATGATGAG+AGG 0.588512 1.3:+56422379 None:intergenic
ATGATAGATGAGATGTCAGA+AGG 0.589136 1.3:+56422469 None:intergenic
GGAGGCTGATCGGAAAGTGT+TGG 0.593620 1.3:+56422522 None:intergenic
ATTCAATTGGAGAGAAAGAG+TGG 0.595763 1.3:-56421484 MS.gene005030:CDS
TTATCAGTTGGTGTCGAAGG+TGG 0.596520 1.3:-56419631 MS.gene005030:CDS
AGCTGCATATTGAGTATTTG+GGG 0.601395 1.3:+56419708 None:intergenic
TTTGGTAGGAATGTTGGCAA+GGG 0.607331 1.3:+56422432 None:intergenic
ATACAGATGAGTGGTGGTCG+TGG 0.619250 1.3:-56419433 MS.gene005030:CDS
TGGATTTCAGAACTGTTCTG+CGG 0.620211 1.3:-56419656 MS.gene005030:CDS
TGTCTGTTTGGATCCAAATG+TGG 0.625217 1.3:-56419590 MS.gene005030:CDS
TCTATCATCACCCCAAACAA+TGG 0.627087 1.3:+56421426 None:intergenic
AGTATTTGGGGACAGGACGA+TGG 0.644084 1.3:+56419720 None:intergenic
GTCCTACTGTGAGAAGCGAT+GGG 0.647735 1.3:-56419525 MS.gene005030:CDS
CACCCATCGCTTCTCACAGT+AGG 0.650219 1.3:+56419523 None:intergenic
CAGATGAGTGGTGGTCGTGG+TGG 0.655384 1.3:-56419430 MS.gene005030:CDS
TCGGAAAGTGTTGGAAACGA+CGG 0.666718 1.3:+56422531 None:intergenic
AATCCTACTACTGTGTTGTG+CGG 0.681890 1.3:+56419553 None:intergenic
AAAACGATTCCATACAGCGT+CGG 0.682477 1.3:+56422495 None:intergenic
TGTTTGGATCCAAATGTGGA+AGG 0.696224 1.3:-56419586 MS.gene005030:CDS
CTACTGTGAGAAGCGATGGG+TGG 0.696678 1.3:-56419522 MS.gene005030:CDS
CGTACAACTCCAGTTGACGC+CGG 0.721519 1.3:-56422562 MS.gene005030:CDS
ATGAATCTGATACAGATGAG+TGG 0.742711 1.3:-56419442 MS.gene005030:CDS
AATCTGATACAGATGAGTGG+TGG 0.745247 1.3:-56419439 MS.gene005030:CDS
AGTTGTACGAGAGACTATGG+TGG 0.755358 1.3:+56422576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAGAAAAATAAAAAA+TGG + chr1.3:56421057-56421076 None:intergenic 10.0%
!! AATAATAATAAATGTTGCAT+TGG + chr1.3:56421098-56421117 None:intergenic 15.0%
!! CAATAATAAGTGTATAATAA+TGG + chr1.3:56421123-56421142 None:intergenic 15.0%
!!! ATTAATTTTAACTTGAACAA+AGG + chr1.3:56421961-56421980 None:intergenic 15.0%
!!! GTGACAAATATATTTTTAAA+GGG + chr1.3:56420372-56420391 None:intergenic 15.0%
!!! TATTTTTAAAGATACTTCAA+CGG - chr1.3:56420988-56421007 MS.gene005030:intron 15.0%
!!! TGACAAATATATTTTTAAAG+GGG + chr1.3:56420371-56420390 None:intergenic 15.0%
!! AACACCAAATATGAAATATT+TGG - chr1.3:56419695-56419714 MS.gene005030:CDS 20.0%
!! CAGTTTGTAATAATAACAAT+GGG - chr1.3:56420032-56420051 MS.gene005030:intron 20.0%
!! CATTCAAAAATAAATAGGTT+CGG + chr1.3:56421801-56421820 None:intergenic 20.0%
!! GATTAACTCATAATTAATAC+TGG - chr1.3:56420653-56420672 MS.gene005030:intron 20.0%
!! GGTCTGATATTTAAAAAATT+TGG + chr1.3:56421834-56421853 None:intergenic 20.0%
!! TCAACCAAATATTTCATATT+TGG + chr1.3:56419702-56419721 None:intergenic 20.0%
!! TCAGTTTGTAATAATAACAA+TGG - chr1.3:56420031-56420050 MS.gene005030:intron 20.0%
!! TGATGCATTCAAAAATAAAT+AGG + chr1.3:56421806-56421825 None:intergenic 20.0%
!! TTGTAAAGTAACAAACAAAT+TGG + chr1.3:56421855-56421874 None:intergenic 20.0%
!!! ATTAATTGTGTTGATTTTGA+TGG + chr1.3:56421216-56421235 None:intergenic 20.0%
!!! ATTTTTAAAGATACTTCAAC+GGG - chr1.3:56420989-56421008 MS.gene005030:intron 20.0%
!!! GACAAATATATTTTTAAAGG+GGG + chr1.3:56420370-56420389 None:intergenic 20.0%
!!! GATTTTTTAAGATGTTTAGT+TGG - chr1.3:56419668-56419687 MS.gene005030:CDS 20.0%
!!! GGTGACAAATATATTTTTAA+AGG + chr1.3:56420373-56420392 None:intergenic 20.0%
!!! TTTTTCAATTAAGATCACAT+GGG + chr1.3:56420926-56420945 None:intergenic 20.0%
!!! TTTTTTCAATTAAGATCACA+TGG + chr1.3:56420927-56420946 None:intergenic 20.0%
! AAACGAGTATTATTTAGAGA+AGG - chr1.3:56421265-56421284 MS.gene005030:intron 25.0%
! AAATAATTCGAAGTTGCAAT+TGG - chr1.3:56419843-56419862 MS.gene005030:intron 25.0%
! ACCTTATTAATTGTAGTTAG+TGG + chr1.3:56421168-56421187 None:intergenic 25.0%
! AGATGAAAAGGAAAAGAAAA+AGG + chr1.3:56420192-56420211 None:intergenic 25.0%
! ATCATTCAAGCCTATAAAAA+AGG + chr1.3:56421354-56421373 None:intergenic 25.0%
! ATGCAAAGATTAGAAGATAA+TGG + chr1.3:56422159-56422178 None:intergenic 25.0%
! ATTAAATTGCAGGAATGTAA+AGG + chr1.3:56420147-56420166 None:intergenic 25.0%
! GAACATTGATATTAAATTGC+AGG + chr1.3:56420157-56420176 None:intergenic 25.0%
! GAGTTTACATTACCAAAAAT+CGG - chr1.3:56420446-56420465 MS.gene005030:intron 25.0%
! GTACTCGACATATAAAATAA+TGG + chr1.3:56422015-56422034 None:intergenic 25.0%
! TAGTACTAAAATTGTCTGTT+TGG - chr1.3:56422383-56422402 MS.gene005030:CDS 25.0%
! TATAAAAAAGGACATAACTG+TGG + chr1.3:56421342-56421361 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - chr1.3:56421164-56421183 MS.gene005030:intron 25.0%
! TGCAAAGATTAGAAGATAAT+GGG + chr1.3:56422158-56422177 None:intergenic 25.0%
! TTAAATTGCAGGAATGTAAA+GGG + chr1.3:56420146-56420165 None:intergenic 25.0%
! TTCAAAATGATTGATGCTTA+TGG - chr1.3:56422309-56422328 MS.gene005030:intron 25.0%
! TTGTAATAATAACAATGGGT+TGG - chr1.3:56420036-56420055 MS.gene005030:intron 25.0%
!!! AACTTGTTATTACAAGATGT+TGG - chr1.3:56420274-56420293 MS.gene005030:intron 25.0%
!!! ACAGTTATGTCCTTTTTTAT+AGG - chr1.3:56421341-56421360 MS.gene005030:intron 25.0%
!!! TTTTAACTTGAACAAAGGAA+TGG + chr1.3:56421956-56421975 None:intergenic 25.0%
!!! TTTTTTGATCCTAATTGTTG+CGG - chr1.3:56421772-56421791 MS.gene005030:intron 25.0%
AAAACTACCACTAAATCCTA+CGG + chr1.3:56419991-56420010 None:intergenic 30.0%
AACAAGTGCTTGCAAAAATT+TGG - chr1.3:56421571-56421590 MS.gene005030:intron 30.0%
AACATAGTACTTGTTCTTGT+TGG - chr1.3:56420691-56420710 MS.gene005030:intron 30.0%
AAGAGACAATTATTGTGAGA+AGG + chr1.3:56421032-56421051 None:intergenic 30.0%
AAGCTGCATATTGAGTATTT+GGG + chr1.3:56422281-56422300 None:intergenic 30.0%
ACAGTAATTGATCACTAACA+TGG + chr1.3:56421385-56421404 None:intergenic 30.0%
ACATTTGAGCTTACATCTTA+CGG - chr1.3:56420757-56420776 MS.gene005030:intron 30.0%
AGAAAATTTAAGAGCTAACC+TGG + chr1.3:56420616-56420635 None:intergenic 30.0%
AGAAGAAAGAGAAGATGAAA+AGG + chr1.3:56420204-56420223 None:intergenic 30.0%
AGGCTAATTCTAGTAGTTTA+TGG - chr1.3:56420876-56420895 MS.gene005030:intron 30.0%
ATAATCATTCCTCACTAACT+TGG + chr1.3:56421504-56421523 None:intergenic 30.0%
ATTCCAAATTCTAAGTCACA+GGG + chr1.3:56421603-56421622 None:intergenic 30.0%
CAGTAATTGATCACTAACAT+GGG + chr1.3:56421384-56421403 None:intergenic 30.0%
CATCATCGATCATGATAAAA+AGG - chr1.3:56419611-56419630 MS.gene005030:CDS 30.0%
CTAGTGTCTTAGGAAATTAT+AGG - chr1.3:56419940-56419959 MS.gene005030:intron 30.0%
CTATAATTTCCTAAGACACT+AGG + chr1.3:56419942-56419961 None:intergenic 30.0%
GAGTATTATTTAGAGAAGGA+GGG - chr1.3:56421269-56421288 MS.gene005030:intron 30.0%
GCAAAGATTAGAAGATAATG+GGG + chr1.3:56422157-56422176 None:intergenic 30.0%
GCAACAATTAGGATCAAAAA+AGG + chr1.3:56421773-56421792 None:intergenic 30.0%
TAAGCTGCATATTGAGTATT+TGG + chr1.3:56422282-56422301 None:intergenic 30.0%
TAATACTGGAGACTATTTGA+GGG - chr1.3:56420667-56420686 MS.gene005030:intron 30.0%
TCATTTCAACAATAAGCCTT+AGG + chr1.3:56419650-56419669 None:intergenic 30.0%
TGTAATAACAAGTTGTCTCA+TGG + chr1.3:56420268-56420287 None:intergenic 30.0%
TTAATACTGGAGACTATTTG+AGG - chr1.3:56420666-56420685 MS.gene005030:intron 30.0%
TTGACTAAAAAAGACCTGTT+TGG - chr1.3:56420793-56420812 MS.gene005030:intron 30.0%
TTTATGTCCTAAACCATTGA+TGG - chr1.3:56420404-56420423 MS.gene005030:intron 30.0%
! AAGTTATTTCCTAGTGTCTT+AGG - chr1.3:56419930-56419949 MS.gene005030:intron 30.0%
! ACTCGTTTAAGATTTATGCA+CGG + chr1.3:56421253-56421272 None:intergenic 30.0%
! CATCTTTTGTGTACTACTTT+TGG - chr1.3:56422176-56422195 MS.gene005030:intron 30.0%
! GAATTATTTCTCCTTGTCTT+TGG + chr1.3:56419832-56419851 None:intergenic 30.0%
! TCATGATTATGTTTTCGACA+AGG - chr1.3:56419724-56419743 MS.gene005030:CDS 30.0%
!! CTACTTTTAATATAGACCGT+AGG - chr1.3:56419972-56419991 MS.gene005030:intron 30.0%
!! GTTATTTCTACACATGTTCA+TGG - chr1.3:56421904-56421923 MS.gene005030:intron 30.0%
!! TGAAATGAAGAGCATTCAAT+TGG - chr1.3:56420488-56420507 MS.gene005030:intron 30.0%
AAAAAGGACATAACTGTGGA+TGG + chr1.3:56421338-56421357 None:intergenic 35.0%
AAACAGATCCTAATCAGTGA+TGG + chr1.3:56420727-56420746 None:intergenic 35.0%
AATACTGGAGACTATTTGAG+GGG - chr1.3:56420668-56420687 MS.gene005030:intron 35.0%
ACTTGGATGCAAAAGATAGT+TGG + chr1.3:56421682-56421701 None:intergenic 35.0%
AGCACTTGTTTGACTGAATT+TGG + chr1.3:56421561-56421580 None:intergenic 35.0%
AGCTGCATATTGAGTATTTG+GGG + chr1.3:56422280-56422299 None:intergenic 35.0%
AGTTCTCTTGGGTATTCAAA+AGG - chr1.3:56421410-56421429 MS.gene005030:CDS 35.0%
ATATAGACCGTAGGATTTAG+TGG - chr1.3:56419981-56420000 MS.gene005030:intron 35.0%
ATGAATCTGATACAGATGAG+TGG - chr1.3:56422543-56422562 MS.gene005030:CDS 35.0%
ATGATAGATGAGATGTCAGA+AGG + chr1.3:56419519-56419538 None:intergenic 35.0%
ATGGTATCCATCAATGGTTT+AGG + chr1.3:56420414-56420433 None:intergenic 35.0%
ATTCAATTGGAGAGAAAGAG+TGG - chr1.3:56420501-56420520 MS.gene005030:intron 35.0%
CAAAAATCGGTGTAAACAGT+TGG - chr1.3:56420459-56420478 MS.gene005030:intron 35.0%
CAAAATGACAGTTACCAAAC+AGG + chr1.3:56420810-56420829 None:intergenic 35.0%
CATCGATCATGATAAAAAGG+TGG - chr1.3:56419614-56419633 MS.gene005030:CDS 35.0%
CGAGTATTATTTAGAGAAGG+AGG - chr1.3:56421268-56421287 MS.gene005030:intron 35.0%
CTTGGATGCAAAAGATAGTT+GGG + chr1.3:56421681-56421700 None:intergenic 35.0%
GACAATTATTGTGAGAAGGA+TGG + chr1.3:56421028-56421047 None:intergenic 35.0%
GATACTTAGGTGAAGTGATA+TGG + chr1.3:56421634-56421653 None:intergenic 35.0%
GATATGTGTTGAGGATACTT+AGG + chr1.3:56421647-56421666 None:intergenic 35.0%
GATTCCAAATTCTAAGTCAC+AGG + chr1.3:56421604-56421623 None:intergenic 35.0%
GCACTTGTTTGACTGAATTT+GGG + chr1.3:56421560-56421579 None:intergenic 35.0%
TAAACTCCATTATCCATCGA+TGG + chr1.3:56420433-56420452 None:intergenic 35.0%
TAATCAGTGATGGCTTGATT+CGG + chr1.3:56420717-56420736 None:intergenic 35.0%
TAGATCTCTTGCCATTGTTT+GGG - chr1.3:56420548-56420567 MS.gene005030:intron 35.0%
TATCATGATCGATGATGAGA+GGG + chr1.3:56419608-56419627 None:intergenic 35.0%
TCATCTGTATCAGATTCATC+TGG + chr1.3:56422542-56422561 None:intergenic 35.0%
TCTACTAATCCAAGTTAGTG+AGG - chr1.3:56421492-56421511 MS.gene005030:intron 35.0%
TGTCGAGTACTTCATCATTA+AGG - chr1.3:56422025-56422044 MS.gene005030:intron 35.0%
TTATCATGATCGATGATGAG+AGG + chr1.3:56419609-56419628 None:intergenic 35.0%
TTGTTGAAGGAATTGAAGTC+AGG - chr1.3:56422595-56422614 MS.gene005030:CDS 35.0%
TTTACTAGTGTCTTAGTGCA+TGG - chr1.3:56419907-56419926 MS.gene005030:intron 35.0%
! ACTCTTTCATTTTCTATGCC+TGG + chr1.3:56422519-56422538 None:intergenic 35.0%
! AGCAAGATAGAGATCCTTTT+TGG + chr1.3:56419574-56419593 None:intergenic 35.0%
! ATCACTGATTAGGATCTGTT+TGG - chr1.3:56420726-56420745 MS.gene005030:intron 35.0%
! TACTGTTGATGAGTTCTCTT+GGG - chr1.3:56421399-56421418 MS.gene005030:CDS 35.0%
! TTACTGTTGATGAGTTCTCT+TGG - chr1.3:56421398-56421417 MS.gene005030:CDS 35.0%
!! AGACAATTTTAGTACTACGC+TGG + chr1.3:56422380-56422399 None:intergenic 35.0%
!! AGATAGAGATCCTTTTTGGT+AGG + chr1.3:56419570-56419589 None:intergenic 35.0%
!! AGATTAGAAGATAATGGGGA+AGG + chr1.3:56422153-56422172 None:intergenic 35.0%
!! ATCCTTTTTGGTAGGAATGT+TGG + chr1.3:56419562-56419581 None:intergenic 35.0%
!! TTTGTGTACTACTTTTGGAC+AGG - chr1.3:56422181-56422200 MS.gene005030:intron 35.0%
!!! AGCTTATAGCGTGTTTTGAT+AGG - chr1.3:56420856-56420875 MS.gene005030:intron 35.0%
!!! CAACTGTTTACACCGATTTT+TGG + chr1.3:56420461-56420480 None:intergenic 35.0%
!!! TAGTGGTAGTTTTTTCTACG+AGG - chr1.3:56419998-56420017 MS.gene005030:intron 35.0%
AAAACGATTCCATACAGCGT+CGG + chr1.3:56419493-56419512 None:intergenic 40.0%
AATCCTACTACTGTGTTGTG+CGG + chr1.3:56422435-56422454 None:intergenic 40.0%
AATCTGATACAGATGAGTGG+TGG - chr1.3:56422546-56422565 MS.gene005030:CDS 40.0%
AATTGCAGGAATGTAAAGGG+TGG + chr1.3:56420143-56420162 None:intergenic 40.0%
ACTTAGGTGAAGTGATATGG+AGG + chr1.3:56421631-56421650 None:intergenic 40.0%
ACTTCATCATTAAGGACTGC+TGG - chr1.3:56422033-56422052 MS.gene005030:intron 40.0%
AGATCTCTTGCCATTGTTTG+GGG - chr1.3:56420549-56420568 MS.gene005030:intron 40.0%
AGGACATAAATGTCGATCGA+TGG + chr1.3:56420394-56420413 None:intergenic 40.0%
AGGTGGTATTCTTCTTCCTA+AGG - chr1.3:56419631-56419650 MS.gene005030:CDS 40.0%
AGTCAGTTAATTCGTAGCAG+AGG + chr1.3:56421465-56421484 None:intergenic 40.0%
CATATTGAGTATTTGGGGAC+AGG + chr1.3:56422275-56422294 None:intergenic 40.0%
CTAGATCTCTTGCCATTGTT+TGG - chr1.3:56420547-56420566 MS.gene005030:intron 40.0%
CTGATTAGGATCTGTTTGGT+TGG - chr1.3:56420730-56420749 MS.gene005030:intron 40.0%
CTTGTCTTTGGTCGAAATTG+CGG + chr1.3:56419820-56419839 None:intergenic 40.0%
GGAAAAGCTGATTATGTTCG+TGG - chr1.3:56422066-56422085 MS.gene005030:intron 40.0%
GGAAGGAATCTCAGAAAATG+GGG + chr1.3:56422136-56422155 None:intergenic 40.0%
GGGAAGGAATCTCAGAAAAT+GGG + chr1.3:56422137-56422156 None:intergenic 40.0%
TCTATCATCACCCCAAACAA+TGG + chr1.3:56420562-56420581 None:intergenic 40.0%
TGAGGATTACCTTCCACATT+TGG + chr1.3:56422411-56422430 None:intergenic 40.0%
TGATTTCTATGCCTGATTCC+AGG - chr1.3:56420595-56420614 MS.gene005030:intron 40.0%
TGCCAACATTCCTACCAAAA+AGG - chr1.3:56419557-56419576 MS.gene005030:CDS 40.0%
TGGATACCATCGATGGATAA+TGG - chr1.3:56420424-56420443 MS.gene005030:intron 40.0%
TGGATTTCAGAACTGTTCTG+CGG - chr1.3:56422329-56422348 MS.gene005030:intron 40.0%
TGTAGTGAGCAAGACAGAAA+TGG + chr1.3:56422095-56422114 None:intergenic 40.0%
TGTCCCTGTGACTTAGAATT+TGG - chr1.3:56421597-56421616 MS.gene005030:intron 40.0%
TGTCTGTTTGGATCCAAATG+TGG - chr1.3:56422395-56422414 MS.gene005030:CDS 40.0%
TGTTCTGCGGATTTATCAGT+TGG - chr1.3:56422342-56422361 MS.gene005030:intron 40.0%
TGTTTGGATCCAAATGTGGA+AGG - chr1.3:56422399-56422418 MS.gene005030:CDS 40.0%
TTAAGAGCTAACCTGGAATC+AGG + chr1.3:56420609-56420628 None:intergenic 40.0%
TTTGGTAGGAATGTTGGCAA+GGG + chr1.3:56419556-56419575 None:intergenic 40.0%
! AAGAGCATGGATATGTGTTG+AGG + chr1.3:56421656-56421675 None:intergenic 40.0%
! ATGTTTTCGACAAGGCAGAT+GGG - chr1.3:56419732-56419751 MS.gene005030:CDS 40.0%
! GAATCAAGCCATCACTGATT+AGG - chr1.3:56420716-56420735 MS.gene005030:intron 40.0%
! TATGTTTTCGACAAGGCAGA+TGG - chr1.3:56419731-56419750 MS.gene005030:CDS 40.0%
! TGAATTTGGGTTTGAACCTG+AGG + chr1.3:56421547-56421566 None:intergenic 40.0%
! TTTTGGTAGGAATGTTGGCA+AGG + chr1.3:56419557-56419576 None:intergenic 40.0%
!! CTAAGCTTGTTGATGTGTGT+TGG - chr1.3:56422217-56422236 MS.gene005030:intron 40.0%
!! GATTTATCAGTTGGTGTCGA+AGG - chr1.3:56422351-56422370 MS.gene005030:intron 40.0%
!! GTGTGTTGGCTTGAAATTCA+TGG - chr1.3:56422231-56422250 MS.gene005030:intron 40.0%
AAACTCATAGCAACCACCTC+AGG - chr1.3:56421528-56421547 MS.gene005030:intron 45.0%
AAGAGAGGTCTCGTTGTTGA+AGG - chr1.3:56422582-56422601 MS.gene005030:CDS 45.0%
AAGTGATGTCATAAACCGCG+AGG - chr1.3:56420334-56420353 MS.gene005030:intron 45.0%
AGAGCATATGGGTTCATGAG+TGG - chr1.3:56420098-56420117 MS.gene005030:intron 45.0%
AGATAGTTGGGTGAAGAGCA+TGG + chr1.3:56421669-56421688 None:intergenic 45.0%
AGTTGTACGAGAGACTATGG+TGG + chr1.3:56419412-56419431 None:intergenic 45.0%
ATGGGTGAGTTCTTCAATCC+AGG - chr1.3:56422498-56422517 MS.gene005030:CDS 45.0%
CAACAAGCTTAGCGACTTCA+GGG + chr1.3:56422209-56422228 None:intergenic 45.0%
CAGTTAATTCGTAGCAGAGG+AGG + chr1.3:56421462-56421481 None:intergenic 45.0%
CATGAACCCATATGCTCTTG+TGG + chr1.3:56420096-56420115 None:intergenic 45.0%
CCATCGATGGTATCCATCAA+TGG + chr1.3:56420420-56420439 None:intergenic 45.0%
CGCAATTTCGACCAAAGACA+AGG - chr1.3:56419818-56419837 MS.gene005030:intron 45.0%
CGCTACAGAAGAAGGATCTT+GGG + chr1.3:56421721-56421740 None:intergenic 45.0%
GACAGAGATTCAGGATTTGC+CGG - chr1.3:56419374-56419393 MS.gene005030:CDS 45.0%
GACATGCTGCAAAGTGCAAA+GGG - chr1.3:56419762-56419781 MS.gene005030:CDS 45.0%
GCATCCAAGTTCAGCTTGAT+TGG - chr1.3:56421692-56421711 MS.gene005030:intron 45.0%
GCTACAGAAGAAGGATCTTG+GGG + chr1.3:56421720-56421739 None:intergenic 45.0%
GGATCCAATCAAGCTGAACT+TGG + chr1.3:56421699-56421718 None:intergenic 45.0%
GGGGAAGGAATCTCAGAAAA+TGG + chr1.3:56422138-56422157 None:intergenic 45.0%
TCAACAAGCTTAGCGACTTC+AGG + chr1.3:56422210-56422229 None:intergenic 45.0%
TCATCATTAAGGACTGCTGG+TGG - chr1.3:56422036-56422055 MS.gene005030:intron 45.0%
TGGAGTTGTACGAGAGACTA+TGG + chr1.3:56419415-56419434 None:intergenic 45.0%
! ATTTGGGTTTGAACCTGAGG+TGG + chr1.3:56421544-56421563 None:intergenic 45.0%
! CCATTGATGGATACCATCGA+TGG - chr1.3:56420417-56420436 MS.gene005030:intron 45.0%
! GCAGTTTTTGCTTCATCTGC+AGG - chr1.3:56421743-56421762 MS.gene005030:intron 45.0%
!! TCGGAAAGTGTTGGAAACGA+CGG + chr1.3:56419457-56419476 None:intergenic 45.0%
!! TTATCAGTTGGTGTCGAAGG+TGG - chr1.3:56422354-56422373 MS.gene005030:intron 45.0%
AACTGCAGCGCTACAGAAGA+AGG + chr1.3:56421729-56421748 None:intergenic 50.0%
AGTATTTGGGGACAGGACGA+TGG + chr1.3:56422268-56422287 None:intergenic 50.0%
ATACAGATGAGTGGTGGTCG+TGG - chr1.3:56422552-56422571 MS.gene005030:CDS 50.0%
ATGGTGGCAATGCATCCTTC+CGG + chr1.3:56419396-56419415 None:intergenic 50.0%
CGACATGCTGCAAAGTGCAA+AGG - chr1.3:56419761-56419780 MS.gene005030:CDS 50.0%
GAACCCATATGCTCTTGTGG+CGG + chr1.3:56420093-56420112 None:intergenic 50.0%
GAAGTTGCAATTGGAGCGCA+TGG - chr1.3:56419852-56419871 MS.gene005030:intron 50.0%
GAGATTCAGGATTTGCCGGA+AGG - chr1.3:56419378-56419397 MS.gene005030:CDS 50.0%
GCAGGAATGTAAAGGGTGGT+TGG + chr1.3:56420139-56420158 None:intergenic 50.0%
GCGCTACAGAAGAAGGATCT+TGG + chr1.3:56421722-56421741 None:intergenic 50.0%
GGGGTGATGATAGACGCTAT+TGG - chr1.3:56420568-56420587 MS.gene005030:intron 50.0%
GGGTGGTTGGAGATTGAGAT+GGG - chr1.3:56422480-56422499 MS.gene005030:CDS 50.0%
GTAGGAATGTTGGCAAGGGA+AGG + chr1.3:56419552-56419571 None:intergenic 50.0%
GTCCTACTGTGAGAAGCGAT+GGG - chr1.3:56422460-56422479 MS.gene005030:CDS 50.0%
GTTCGGTTGCCGCAACAATT+AGG + chr1.3:56421784-56421803 None:intergenic 50.0%
TGGGTGGTTGGAGATTGAGA+TGG - chr1.3:56422479-56422498 MS.gene005030:CDS 50.0%
! ATTCCATACAGCGTCGGAGT+TGG + chr1.3:56419487-56419506 None:intergenic 50.0%
ACTACTGTGTTGTGCGGCTG+AGG + chr1.3:56422429-56422448 None:intergenic 55.0%
AGGACTGCTGGTGGTCATTG+AGG - chr1.3:56422045-56422064 MS.gene005030:intron 55.0%
CACCCATCGCTTCTCACAGT+AGG + chr1.3:56422465-56422484 None:intergenic 55.0%
CAGCCGCACAACACAGTAGT+AGG - chr1.3:56422429-56422448 MS.gene005030:CDS 55.0%
CGTACAACTCCAGTTGACGC+CGG - chr1.3:56419423-56419442 MS.gene005030:CDS 55.0%
CGTCCTACTGTGAGAAGCGA+TGG - chr1.3:56422459-56422478 MS.gene005030:CDS 55.0%
CTACTGTGAGAAGCGATGGG+TGG - chr1.3:56422463-56422482 MS.gene005030:CDS 55.0%
GGAGCGCATGGTGACAAACA+AGG - chr1.3:56419864-56419883 MS.gene005030:intron 55.0%
TGTGAGAAGCGATGGGTGGT+TGG - chr1.3:56422467-56422486 MS.gene005030:CDS 55.0%
! GGAGGCTGATCGGAAAGTGT+TGG + chr1.3:56419466-56419485 None:intergenic 55.0%
ATATGCTCTTGTGGCGGCGG+GGG + chr1.3:56420087-56420106 None:intergenic 60.0%
CAGATGAGTGGTGGTCGTGG+TGG - chr1.3:56422555-56422574 MS.gene005030:CDS 60.0%
CATATGCTCTTGTGGCGGCG+GGG + chr1.3:56420088-56420107 None:intergenic 60.0%
CCATATGCTCTTGTGGCGGC+GGG + chr1.3:56420089-56420108 None:intergenic 60.0%
CCCATATGCTCTTGTGGCGG+CGG + chr1.3:56420090-56420109 None:intergenic 60.0%
CCTCCAACTCCGACGCTGTA+TGG - chr1.3:56419481-56419500 MS.gene005030:CDS 60.0%
CGTCGGAGTTGGAGGCTGAT+CGG + chr1.3:56419476-56419495 None:intergenic 60.0%
GGAAACGACGGAGAGTCTGC+CGG + chr1.3:56419445-56419464 None:intergenic 60.0%
GGTCGTGGTGGTTGGAAGAG+AGG - chr1.3:56422567-56422586 MS.gene005030:CDS 60.0%
TGAGTGGTGGTCGTGGTGGT+TGG - chr1.3:56422559-56422578 MS.gene005030:CDS 60.0%
! CCATACAGCGTCGGAGTTGG+AGG + chr1.3:56419484-56419503 None:intergenic 60.0%
! CCGCCGCCACAAGAGCATAT+GGG - chr1.3:56420087-56420106 MS.gene005030:intron 60.0%
GAGAGTCTGCCGGCGTCAAC+TGG + chr1.3:56419435-56419454 None:intergenic 65.0%
GGGGGATCGTTCAAGCCTCG+CGG + chr1.3:56420352-56420371 None:intergenic 65.0%
! CCCGCCGCCACAAGAGCATA+TGG - chr1.3:56420086-56420105 MS.gene005030:intron 65.0%
! TCTTGTGGCGGCGGGGGTGT+TGG + chr1.3:56420081-56420100 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 56419372 56422635 56419372 ID=MS.gene005030
chr1.3 mRNA 56419372 56422635 56419372 ID=MS.gene005030.t1;Parent=MS.gene005030
chr1.3 exon 56422375 56422635 56422375 ID=MS.gene005030.t1.exon1;Parent=MS.gene005030.t1
chr1.3 CDS 56422375 56422635 56422375 ID=cds.MS.gene005030.t1;Parent=MS.gene005030.t1
chr1.3 exon 56421391 56421509 56421391 ID=MS.gene005030.t1.exon2;Parent=MS.gene005030.t1
chr1.3 CDS 56421391 56421509 56421391 ID=cds.MS.gene005030.t1;Parent=MS.gene005030.t1
chr1.3 exon 56419372 56419804 56419372 ID=MS.gene005030.t1.exon3;Parent=MS.gene005030.t1
chr1.3 CDS 56419372 56419804 56419372 ID=cds.MS.gene005030.t1;Parent=MS.gene005030.t1
Gene Sequence

>MS.gene005030

ATGACAGAGATTCAGGATTTGCCGGAAGGATGCATTGCCACCATAGTCTCTCGTACAACTCCAGTTGACGCCGGCAGACTCTCCGTCGTTTCCAACACTTTCCGATCAGCCTCCAACTCCGACGCTGTATGGAATCGTTTTCTACCTTCTGACATCTCATCTATCATCTCGCACTCTCCTTCCCTTGCCAACATTCCTACCAAAAAGGATCTCTATCTTGCTCTGTCTGATCGCCCTCTCATCATCGATCATGATAAAAAGGTGGTATTCTTCTTCCTAAGGCTTATTGTTGAAATGATTTTTTAAGATGTTTAGTTGGTGTTAACACCAAATATGAAATATTTGGTTGAACTCATGATTATGTTTTCGACAAGGCAGATGGGTTATTTCGACATGCTGCAAAGTGCAAAGGGATTTCGATCAATAGCATACAGACTTCGACACGCCGCAATTTCGACCAAAGACAAGGAGAAATAATTCGAAGTTGCAATTGGAGCGCATGGTGACAAACAAGGCTGAAGTGCTTTGAAGATTATTTACTAGTGTCTTAGTGCATGGAAGTTATTTCCTAGTGTCTTAGGAAATTATAGGAAGTTATTTCTACTTTTAATATAGACCGTAGGATTTAGTGGTAGTTTTTTCTACGAGGTCTATATATATCAGTTTGTAATAATAACAATGGGTTGGTTTCTTGATTTCTGAAACTCCAACACCCCCGCCGCCACAAGAGCATATGGGTTCATGAGTGGATAGATCGACAGATTCCAACCACCCTTTACATTCCTGCAATTTAATATCAATGTTCTTGTTTTATTTTCCTTTTTCTTTTCCTTTTCATCTTCTCTTTCTTCTTCATTTTAACATGCTCACTTGAGCAATTTTCTATCATGTTGCCATGAGACAACTTGTTATTACAAGATGTTGGAAGCAATTCTGACATTAATGTTCTTAAAGAATGCATGAAGTGATGTCATAAACCGCGAGGCTTGAACGATCCCCCTTTAAAAATATATTTGTCACCATCGATCGACATTTATGTCCTAAACCATTGATGGATACCATCGATGGATAATGGAGTTTACATTACCAAAAATCGGTGTAAACAGTTGGATGTGTTGAAATGAAGAGCATTCAATTGGAGAGAAAGAGTGGAAAAAAATGTTACATGCTTTCTGCTAGATCTCTTGCCATTGTTTGGGGTGATGATAGACGCTATTGGAACTTGATTTCTATGCCTGATTCCAGGTTAGCTCTTAAATTTTCTATTTGTTAACATATCTTGATTAACTCATAATTAATACTGGAGACTATTTGAGGGGAACATAGTACTTGTTCTTGTTGGCCGAATCAAGCCATCACTGATTAGGATCTGTTTGGTTGGACACACATTTGAGCTTACATCTTACGGTTTAAAAGCTCGTTTGACTAAAAAAGACCTGTTTGGTAACTGTCATTTTGTCATGATCTTATAGCTTATTTTTGTGAGCTTATAGCGTGTTTTGATAGGCTAATTCTAGTAGTTTATGGCTTATAACTTTTATCTCAATTTTACCCATGTGATCTTAATTGAAAAAAAAATAAATATTAATTAAATATATCTTTATTTTGTCATTTCATATTTTTAAAGATACTTCAACGGGTAATTTTACTACTCCATCCTTCTCACAATAATTGTCTCTTTACCATTTTTTATTTTTCTCAAAATAATTGTCACTTTAGATTACCAATGCAACATTTATTATTATTTTCCATTATTATACACTTATTATTGAATTTCATTCAACTTAACTACTCCACTAACTACAATTAATAAGGTATTTTAGTAAATGATACTGATTTTACCATCAAAATCAACACAATTAATCATTTTTTTAATAACCGTGCATAAATCTTAAACGAGTATTATTTAGAGAAGGAGGGAGTAAACACTACAAATTCAATCAACTAGCTTATAGCTTATCAGCCATCCACAGTTATGTCCTTTTTTATAGGCTTGAATGATTCTATTTCCCATGTTAGTGATCAATTACTGTTGATGAGTTCTCTTGGGTATTCAAAAGGAATAACAGAGTTTGAGTGTGCTCTTTCCTCCTCTGCTACGAATTAACTGACTTTTACTATCTACTAATCCAAGTTAGTGAGGAATGATTATATCAAAACTCATAGCAACCACCTCAGGTTCAAACCCAAATTCAGTCAAACAAGTGCTTGCAAAAATTTGGTGATGTCCCTGTGACTTAGAATTTGGAATCTGTTCCTCCATATCACTTCACCTAAGTATCCTCAACACATATCCATGCTCTTCACCCAACTATCTTTTGCATCCAAGTTCAGCTTGATTGGATCCCCAAGATCCTTCTTCTGTAGCGCTGCAGTTTTTGCTTCATCTGCAGGCTTTCCTTTTTTGATCCTAATTGTTGCGGCAACCGAACCTATTTATTTTTGAATGCATCATTTTACCAAATTTTTTAAATATCAGACCAATTTGTTTGTTACTTTACAACTAAAGATGTAGTTCTTATTTTAAGACTTGTTATTTCTACACATGTTCATGGCGAATTGATTTTGCATGATTTGTTTTCCATTCCTTTGTTCAAGTTAAAATTAATTTCTTTAAAGTCATAGCTGTAAACTTCTATTCCATTATTTTATATGTCGAGTACTTCATCATTAAGGACTGCTGGTGGTCATTGAGGAAAAGCTGATTATGTTCGTGGTTACCATTTCTGTCTTGCTCACTACACTCAAGCTGTATTGAATTCCCCATTTTCTGAGATTCCTTCCCCATTATCTTCTAATCTTTGCATCTTTTGTGTACTACTTTTGGACAGGTTCCCTGAAGTCGCTAAGCTTGTTGATGTGTGTTGGCTTGAAATTCATGGTGTGATAAACACCATCGTCCTGTCCCCAAATACTCAATATGCAGCTTATGTTGTGTTCAAAATGATTGATGCTTATGGATTTCAGAACTGTTCTGCGGATTTATCAGTTGGTGTCGAAGGTGGCCAGCGTAGTACTAAAATTGTCTGTTTGGATCCAAATGTGGAAGGTAATCCTCAGCCGCACAACACAGTAGTAGGATTGCAACGTCCTACTGTGAGAAGCGATGGGTGGTTGGAGATTGAGATGGGTGAGTTCTTCAATCCAGGCATAGAAAATGAAAGAGTCCAGATGAATCTGATACAGATGAGTGGTGGTCGTGGTGGTTGGAAGAGAGGTCTCGTTGTTGAAGGAATTGAAGTCAGGCCTAAGTATAACAATTAA
Protein sequence

>MS.gene005030.t1

MTEIQDLPEGCIATIVSRTTPVDAGRLSVVSNTFRSASNSDAVWNRFLPSDISSIISHSPSLANIPTKKDLYLALSDRPLIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNLISMPDSRFPEVAKLVDVCWLEIHGVINTIVLSPNTQYAAYVVFKMIDAYGFQNCSADLSVGVEGGQRSTKIVCLDPNVEGNPQPHNTVVGLQRPTVRSDGWLEIEMGEFFNPGIENERVQMNLIQMSGGRGGWKRGLVVEGIEVRPKYNN