AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07586

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07586.t1 MTR_1g079410 92.000 275 21 1 1 275 1 274 0.0 516
MS.gene07586.t1 MTR_1g079400 73.010 289 47 2 2 274 6 279 4.11e-136 385
MS.gene07586.t1 MTR_1g079260 60.432 278 96 4 6 275 2 273 4.61e-112 324
MS.gene07586.t1 MTR_1g079370 60.448 268 99 3 8 274 4 265 4.71e-108 313
MS.gene07586.t1 MTR_1g100597 60.364 275 93 4 9 274 5 272 1.10e-106 310
MS.gene07586.t1 MTR_1g079460 59.630 270 99 4 9 275 5 267 1.70e-102 300
MS.gene07586.t1 MTR_1g079380 58.519 270 105 3 6 274 2 265 4.90e-102 300
MS.gene07586.t1 MTR_1g079180 57.407 270 102 6 9 274 5 265 1.89e-95 281
MS.gene07586.t1 MTR_1g079200 55.720 271 104 5 9 274 5 264 2.32e-94 279
MS.gene07586.t1 MTR_1g079230 55.036 278 110 4 6 274 2 273 2.77e-93 276
MS.gene07586.t1 MTR_1g079850 52.113 284 117 5 7 275 3 282 5.21e-86 258
MS.gene07586.t1 MTR_3g452600 53.184 267 116 4 8 274 10 267 9.95e-86 257
MS.gene07586.t1 MTR_1g100613 57.317 246 87 4 24 257 5 244 1.02e-85 256
MS.gene07586.t1 MTR_1g079140 47.869 305 122 4 2 274 7 306 1.04e-82 251
MS.gene07586.t1 MTR_2g079100 52.030 271 107 6 7 271 8 261 1.52e-79 241
MS.gene07586.t1 MTR_3g006850 48.525 305 113 8 9 275 18 316 1.20e-78 241
MS.gene07586.t1 MTR_1g026510 47.902 286 128 8 7 275 3 284 3.56e-77 236
MS.gene07586.t1 MTR_1g079250 49.291 282 125 6 7 275 3 279 2.89e-75 231
MS.gene07586.t1 MTR_3g450990 47.038 287 119 6 8 274 10 283 1.80e-74 229
MS.gene07586.t1 MTR_7g112550 44.599 287 133 9 6 274 5 283 1.64e-70 219
MS.gene07586.t1 MTR_1g083580 42.403 283 142 7 6 274 6 281 6.15e-70 217
MS.gene07586.t1 MTR_1g079350 47.101 276 137 5 6 274 2 275 2.44e-66 208
MS.gene07586.t1 MTR_1g079340 44.521 292 138 7 3 274 38 325 9.19e-60 192
MS.gene07586.t1 MTR_7g096300 50.391 256 105 8 6 254 2 242 7.90e-59 199
MS.gene07586.t1 MTR_7g112560 40.672 268 147 6 8 274 1 257 2.17e-57 184
MS.gene07586.t1 MTR_1g078470 56.180 178 71 5 98 274 13 184 6.87e-53 171
MS.gene07586.t1 MTR_4g023570 37.687 268 135 4 8 274 1 237 6.29e-50 165
MS.gene07586.t1 MTR_1g079130 44.041 193 77 4 109 274 1 189 1.49e-41 142
MS.gene07586.t1 MTR_1g079240 47.514 181 81 4 95 274 12 179 1.89e-40 138
MS.gene07586.t1 MTR_1g076870 51.471 136 47 2 136 254 2 135 1.01e-33 120
MS.gene07586.t1 MTR_1g079350 43.750 160 78 4 6 160 2 154 1.27e-30 114
MS.gene07586.t1 MTR_7g096310 48.305 118 57 2 75 190 44 159 3.13e-27 103
MS.gene07586.t1 MTR_1g079210 48.387 124 49 2 138 248 8 129 1.47e-23 93.6
MS.gene07586.t1 MTR_7g103380 26.165 279 177 7 11 275 22 285 4.61e-23 96.3
MS.gene07586.t1 MTR_2g042540 47.573 103 52 1 9 111 5 105 1.17e-22 90.9
MS.gene07586.t1 MTR_3g058640 50.485 103 48 2 136 238 7 106 1.85e-21 87.0
MS.gene07586.t1 MTR_1g078460 52.809 89 38 1 7 95 66 150 9.19e-21 86.7
MS.gene07586.t1 MTR_4g083970 28.042 189 114 3 88 274 122 290 1.64e-20 89.0
MS.gene07586.t1 MTR_1g101390 36.111 144 89 2 11 154 31 171 3.72e-19 85.5
MS.gene07586.t1 MTR_0002s0020 34.000 150 91 3 11 155 25 171 1.83e-18 83.6
MS.gene07586.t1 MTR_4g102770 35.417 144 91 2 11 154 22 163 3.18e-18 82.8
MS.gene07586.t1 MTR_0113s0040 31.333 150 100 2 5 154 19 165 5.89e-18 82.0
MS.gene07586.t1 MTR_5g010800 30.464 151 100 3 6 155 15 161 3.24e-16 77.0
MS.gene07586.t1 MTR_1g079220 50.725 69 31 2 173 241 1 66 3.31e-13 63.9
MS.gene07586.t1 MTR_1g079390 68.000 50 14 2 220 269 8 55 1.22e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07586.t1 AT2G02360 45.324 278 135 5 1 275 7 270 1.83e-77 236
MS.gene07586.t1 AT2G02230 40.127 314 135 8 6 275 30 334 1.65e-73 228
MS.gene07586.t1 AT2G02250 44.485 272 138 6 6 275 45 305 4.71e-71 221
MS.gene07586.t1 AT2G02240 44.649 271 138 4 6 275 59 318 9.04e-68 213
MS.gene07586.t1 AT2G02340 43.590 273 144 5 6 273 34 301 5.84e-67 211
MS.gene07586.t1 AT1G80110 43.939 264 135 6 11 273 4 255 3.10e-62 197
MS.gene07586.t1 AT2G02350 40.511 274 148 5 6 275 22 284 6.45e-59 189
MS.gene07586.t1 AT1G09155 41.844 282 142 7 11 274 3 280 9.59e-59 189
MS.gene07586.t1 AT1G56240 41.281 281 143 7 11 273 4 280 3.38e-54 177
MS.gene07586.t1 AT1G56250 42.199 282 141 8 11 274 4 281 1.83e-53 175
MS.gene07586.t1 AT2G02320 40.146 274 139 7 11 275 43 300 1.59e-51 171
MS.gene07586.t1 AT2G02310 37.500 272 157 5 6 274 43 304 5.76e-51 169
MS.gene07586.t1 AT5G24560 50.340 147 66 1 11 157 6 145 2.89e-44 149
MS.gene07586.t1 AT2G02300 36.823 277 140 9 6 274 32 281 3.09e-44 151
MS.gene07586.t1 AT2G02350 34.503 171 104 4 109 275 1 167 1.11e-23 95.1
MS.gene07586.t1 AT3G53000 26.882 279 170 8 11 273 24 284 3.90e-22 93.6
MS.gene07586.t1 AT3G61060 33.803 142 91 2 11 152 28 166 6.39e-18 82.0
MS.gene07586.t1 AT5G52120 34.211 152 95 2 8 155 21 171 6.94e-18 82.0
MS.gene07586.t1 AT4G19850 31.694 183 96 6 100 274 15 176 3.77e-17 77.4
MS.gene07586.t1 AT4G19850 31.694 183 96 6 100 274 57 218 4.58e-17 78.2
MS.gene07586.t1 AT3G61060 32.394 142 94 1 11 152 28 167 4.86e-17 79.7
MS.gene07586.t1 AT1G12710 33.775 151 96 2 5 155 25 171 1.89e-16 77.8
MS.gene07586.t1 AT1G63090 33.793 145 92 2 11 155 29 169 1.09e-15 75.9
MS.gene07586.t1 AT1G65390 27.684 177 105 4 102 274 253 410 9.72e-14 70.9
MS.gene07586.t1 AT1G33920 26.816 179 93 4 108 274 12 164 4.42e-12 63.5
MS.gene07586.t1 AT4G19840 26.471 170 105 3 108 275 95 246 7.22e-12 64.3
MS.gene07586.t1 AT2G26820 24.855 173 111 3 105 273 320 477 4.50e-11 63.2
MS.gene07586.t1 AT2G26820 23.404 188 120 4 95 273 289 461 7.40e-11 62.4

Find 80 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGCTGGTTTGAAATTTA+TGG 0.100064 1.2:+61990730 MS.gene07586:CDS
AGTGAGAAGTGATGGATTTC+TGG 0.210364 1.2:+61990969 MS.gene07586:CDS
AATCCATCACTTCTCACTTT+TGG 0.235555 1.2:-61990964 None:intergenic
CGTTCTCTATCATCATAGTC+TGG 0.266145 1.2:-61990913 None:intergenic
CATAATCAACAATGGTAAAA+AGG 0.269618 1.2:+61990348 MS.gene07586:CDS
TCTCAACAACTTCATCTTCT+AGG 0.271024 1.2:-61991023 None:intergenic
TACGAAGTCTAGCAACTTCT+TGG 0.288075 1.2:-61990705 None:intergenic
GGGTGACACTCCTTGCTATT+GGG 0.294051 1.2:+61990552 MS.gene07586:CDS
AACTCGATCCTTCACTTCTT+AGG 0.308997 1.2:-61991114 None:intergenic
CCGCTGAATCAGATATTGTT+TGG 0.317627 1.2:+61990206 MS.gene07586:CDS
ATGGGAGAGTTCTTCAATTC+AGG 0.321358 1.2:+61991000 MS.gene07586:CDS
TCTGCTGGTTTGAAATTTAT+GGG 0.342537 1.2:+61990731 MS.gene07586:CDS
GGGGTGACACTCCTTGCTAT+TGG 0.354208 1.2:+61990551 MS.gene07586:CDS
TTTACCATTGTTGATTATGA+TGG 0.358804 1.2:-61990344 None:intergenic
AGAGAAACGGAGTGGTAAAA+AGG 0.359870 1.2:+61990492 MS.gene07586:CDS
AGTGAGATATAGAGACTTCT+TGG 0.362866 1.2:-61990308 None:intergenic
GATGGGTGTACTTGAAATAA+AGG 0.367176 1.2:+61991044 MS.gene07586:CDS
CGCTGAATCAGATATTGTTT+GGG 0.389539 1.2:+61990207 MS.gene07586:CDS
AGCGGCAGAACAAAAGCCTT+TGG 0.405094 1.2:-61990188 None:intergenic
CTAGACTTCGTACGGTCTGC+TGG 0.413537 1.2:+61990716 MS.gene07586:CDS
CTAGAGATCTCTCCATTACT+TGG 0.414237 1.2:+61990530 MS.gene07586:CDS
AAAGGTGGTTTCATTCTTGA+AGG 0.434634 1.2:+61991078 MS.gene07586:CDS
TGGGTCCAACCAAACATTCT+TGG 0.440943 1.2:-61990893 None:intergenic
ACACTCCTTGCTATTGGGAT+TGG 0.441059 1.2:+61990557 MS.gene07586:CDS
AAGTTAACTGTGGGTGTACT+TGG 0.444694 1.2:+61990850 MS.gene07586:CDS
AAGCACGATAGAGGCTTTGC+CGG 0.461575 1.2:+61990099 MS.gene07586:CDS
AGCTACGTATTGAGTATTTG+AGG 0.465011 1.2:-61990776 None:intergenic
TTACCATTGTTGATTATGAT+GGG 0.474095 1.2:-61990343 None:intergenic
AGAGCTTTCAATTAGAGAAA+CGG 0.476839 1.2:+61990479 MS.gene07586:intron
GTGTATCTACCAAGAATGTT+TGG 0.478752 1.2:+61990884 MS.gene07586:CDS
TAGAGATCTCTCCATTACTT+GGG 0.480318 1.2:+61990531 MS.gene07586:CDS
AGAAATGATTGAGATCAAAT+CGG 0.495855 1.2:-61990245 None:intergenic
AGTTGTATGCGACAATATCT+TGG 0.496653 1.2:-61990134 None:intergenic
GTTCTCTATCATCATAGTCT+GGG 0.511952 1.2:-61990912 None:intergenic
AAGTACACCCACAGTTAACT+TGG 0.516811 1.2:-61990848 None:intergenic
CGTCCAAAAGTGAGAAGTGA+TGG 0.519993 1.2:+61990961 MS.gene07586:CDS
GAGATATAGAGACTTCTTGG+AGG 0.521963 1.2:-61990305 None:intergenic
TAAACAGTGAGGACGCAGAC+TGG 0.534129 1.2:-61990273 None:intergenic
ATCTGACCTGGACTCTGGTA+GGG 0.540951 1.2:-61990584 None:intergenic
ATGATTGAGATCAAATCGGA+TGG 0.542290 1.2:-61990241 None:intergenic
TAGAGACTTCTTGGAGGGAG+AGG 0.543893 1.2:-61990299 None:intergenic
AGGAGTGTCACCCCAAGTAA+TGG 0.550622 1.2:-61990542 None:intergenic
ATGGGTGTACTTGAAATAAA+GGG 0.553967 1.2:+61991045 MS.gene07586:CDS
ATCTACCAAGAATGTTTGGT+TGG 0.558152 1.2:+61990888 MS.gene07586:CDS
ATCTTGGCAATGCATCCCTC+CGG 0.558404 1.2:-61990118 None:intergenic
GATCTGACCTGGACTCTGGT+AGG 0.558734 1.2:-61990585 None:intergenic
AGGCTCTCACTTGTTTCCAA+AGG 0.561908 1.2:+61990172 MS.gene07586:CDS
ACGATAGAGGCTTTGCCGGA+GGG 0.562687 1.2:+61990103 MS.gene07586:CDS
GGATTTCTGGAGATTGAGAT+GGG 0.566350 1.2:+61990982 MS.gene07586:CDS
ATAAGATCTGACCTGGACTC+TGG 0.567399 1.2:-61990589 None:intergenic
AAACAGTGAGGACGCAGACT+GGG 0.567855 1.2:-61990272 None:intergenic
TGGATTTCTGGAGATTGAGA+TGG 0.574304 1.2:+61990981 MS.gene07586:CDS
GGATAACCCTACCAGAGTCC+AGG 0.575507 1.2:+61990578 MS.gene07586:CDS
AGAAGTTGCTAGACTTCGTA+CGG 0.575916 1.2:+61990708 MS.gene07586:CDS
AAATAAGACCTAAGAAGTGA+AGG 0.584107 1.2:+61991106 MS.gene07586:CDS
AACATTCTTGGTAGATACAC+CGG 0.584303 1.2:-61990881 None:intergenic
AGAAGATGAAGTTGTTGAGA+TGG 0.589182 1.2:+61991026 MS.gene07586:CDS
GAACGAAATGACGAGTTCCA+AGG 0.592057 1.2:+61990931 MS.gene07586:CDS
CAACTCCAGTCGATTCATGT+AGG 0.592468 1.2:+61990152 MS.gene07586:CDS
CACGATAGAGGCTTTGCCGG+AGG 0.594118 1.2:+61990102 MS.gene07586:CDS
AGACTTCTTGGAGGGAGAGG+TGG 0.596099 1.2:-61990296 None:intergenic
GAGAGCCTACATGAATCGAC+TGG 0.597497 1.2:-61990157 None:intergenic
GAAGATGAAGTTGTTGAGAT+GGG 0.599122 1.2:+61991027 MS.gene07586:CDS
AGGAAGATCTTCAAAACGAT+AGG 0.608932 1.2:-61990824 None:intergenic
TCTTGGTAGATACACCGGCT+TGG 0.611482 1.2:-61990876 None:intergenic
ACACCCACAGTTAACTTGGT+AGG 0.615136 1.2:-61990844 None:intergenic
AGATATAGAGACTTCTTGGA+GGG 0.617472 1.2:-61990304 None:intergenic
TCTTCCTACCAAGTTAACTG+TGG 0.632245 1.2:+61990840 MS.gene07586:CDS
CTTCCTACCAAGTTAACTGT+GGG 0.632517 1.2:+61990841 MS.gene07586:CDS
AGAGATCTCTCCATTACTTG+GGG 0.633491 1.2:+61990532 MS.gene07586:CDS
GGTGTACTTGGAGACCAAGC+CGG 0.634271 1.2:+61990862 MS.gene07586:CDS
GTTATCCAATCCCAATAGCA+AGG 0.634767 1.2:-61990562 None:intergenic
CCAAACAATATCTGATTCAG+CGG 0.635686 1.2:-61990206 None:intergenic
ATAAAGGGTGGTCAAAACAA+AGG 0.642537 1.2:+61991060 MS.gene07586:CDS
TGATTGAGATCAAATCGGAT+GGG 0.645104 1.2:-61990240 None:intergenic
GATCCCATCATAATCAACAA+TGG 0.651324 1.2:+61990340 MS.gene07586:CDS
AAGGGTGGTCAAAACAAAGG+TGG 0.659675 1.2:+61991063 MS.gene07586:CDS
GGGAGAGGTGGTAAACAGTG+AGG 0.699879 1.2:-61990284 None:intergenic
GGTGTACTTGAAATAAAGGG+TGG 0.703552 1.2:+61991048 MS.gene07586:CDS
TTTCAATTAGAGAAACGGAG+TGG 0.709938 1.2:+61990484 MS.gene07586:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAACTTGACTCTTTATTA+TGG + chr1.2:61990442-61990461 MS.gene07586:intron 20.0%
! AGAAATGATTGAGATCAAAT+CGG - chr1.2:61990248-61990267 None:intergenic 25.0%
! CATAATCAACAATGGTAAAA+AGG + chr1.2:61990348-61990367 MS.gene07586:CDS 25.0%
!! TTACCATTGTTGATTATGAT+GGG - chr1.2:61990346-61990365 None:intergenic 25.0%
!! TTTACCATTGTTGATTATGA+TGG - chr1.2:61990347-61990366 None:intergenic 25.0%
AATCTAAATAAGATCTGACC+TGG - chr1.2:61990599-61990618 None:intergenic 30.0%
AGAGCTTTCAATTAGAGAAA+CGG + chr1.2:61990479-61990498 MS.gene07586:intron 30.0%
ATGGGTGTACTTGAAATAAA+GGG + chr1.2:61991045-61991064 MS.gene07586:CDS 30.0%
CAAAAATCGACAACTTGATT+TGG - chr1.2:61990392-61990411 None:intergenic 30.0%
!! CATTTACTGCTGATTGATTT+TGG - chr1.2:61990658-61990677 None:intergenic 30.0%
!! TCTGCTGGTTTGAAATTTAT+GGG + chr1.2:61990731-61990750 MS.gene07586:CDS 30.0%
!! TTGAAAGCTCTGAAATTTAG+CGG - chr1.2:61990470-61990489 None:intergenic 30.0%
AAAGGTGGTTTCATTCTTGA+AGG + chr1.2:61991078-61991097 MS.gene07586:CDS 35.0%
AACATTCTTGGTAGATACAC+CGG - chr1.2:61990884-61990903 None:intergenic 35.0%
AGAAGATGAAGTTGTTGAGA+TGG + chr1.2:61991026-61991045 MS.gene07586:CDS 35.0%
AGATATAGAGACTTCTTGGA+GGG - chr1.2:61990307-61990326 None:intergenic 35.0%
AGCTACGTATTGAGTATTTG+AGG - chr1.2:61990779-61990798 None:intergenic 35.0%
AGGAAGATCTTCAAAACGAT+AGG - chr1.2:61990827-61990846 None:intergenic 35.0%
AGTGAGATATAGAGACTTCT+TGG - chr1.2:61990311-61990330 None:intergenic 35.0%
AGTTGTATGCGACAATATCT+TGG - chr1.2:61990137-61990156 None:intergenic 35.0%
ATAAAGGGTGGTCAAAACAA+AGG + chr1.2:61991060-61991079 MS.gene07586:CDS 35.0%
ATCTACCAAGAATGTTTGGT+TGG + chr1.2:61990888-61990907 MS.gene07586:CDS 35.0%
ATGATTGAGATCAAATCGGA+TGG - chr1.2:61990244-61990263 None:intergenic 35.0%
CCAAACAATATCTGATTCAG+CGG - chr1.2:61990209-61990228 None:intergenic 35.0%
CGCTGAATCAGATATTGTTT+GGG + chr1.2:61990207-61990226 MS.gene07586:CDS 35.0%
GAAGATGAAGTTGTTGAGAT+GGG + chr1.2:61991027-61991046 MS.gene07586:CDS 35.0%
GATCCCATCATAATCAACAA+TGG + chr1.2:61990340-61990359 MS.gene07586:CDS 35.0%
GATGGGTGTACTTGAAATAA+AGG + chr1.2:61991044-61991063 MS.gene07586:CDS 35.0%
GTGTATCTACCAAGAATGTT+TGG + chr1.2:61990884-61990903 MS.gene07586:CDS 35.0%
GTTCTCTATCATCATAGTCT+GGG - chr1.2:61990915-61990934 None:intergenic 35.0%
TAGAGATCTCTCCATTACTT+GGG + chr1.2:61990531-61990550 MS.gene07586:CDS 35.0%
TCTCAACAACTTCATCTTCT+AGG - chr1.2:61991026-61991045 None:intergenic 35.0%
TGATTGAGATCAAATCGGAT+GGG - chr1.2:61990243-61990262 None:intergenic 35.0%
TTTCAATTAGAGAAACGGAG+TGG + chr1.2:61990484-61990503 MS.gene07586:CDS 35.0%
! AATCCATCACTTCTCACTTT+TGG - chr1.2:61990967-61990986 None:intergenic 35.0%
! AGAAGAAAAAAGCACGATAG+AGG + chr1.2:61990090-61990109 MS.gene07586:CDS 35.0%
!! CTGATTGATTTTGGTAGGAT+TGG - chr1.2:61990649-61990668 None:intergenic 35.0%
!! GTCTGCTGGTTTGAAATTTA+TGG + chr1.2:61990730-61990749 MS.gene07586:CDS 35.0%
!! TACTGCTGATTGATTTTGGT+AGG - chr1.2:61990654-61990673 None:intergenic 35.0%
AAGTACACCCACAGTTAACT+TGG - chr1.2:61990851-61990870 None:intergenic 40.0%
AAGTTAACTGTGGGTGTACT+TGG + chr1.2:61990850-61990869 MS.gene07586:CDS 40.0%
AGAAGTTGCTAGACTTCGTA+CGG + chr1.2:61990708-61990727 MS.gene07586:CDS 40.0%
AGAGAAACGGAGTGGTAAAA+AGG + chr1.2:61990492-61990511 MS.gene07586:CDS 40.0%
AGAGATCTCTCCATTACTTG+GGG + chr1.2:61990532-61990551 MS.gene07586:CDS 40.0%
ATGGGAGAGTTCTTCAATTC+AGG + chr1.2:61991000-61991019 MS.gene07586:CDS 40.0%
CCGCTGAATCAGATATTGTT+TGG + chr1.2:61990206-61990225 MS.gene07586:CDS 40.0%
CGTTCTCTATCATCATAGTC+TGG - chr1.2:61990916-61990935 None:intergenic 40.0%
CTAGAGATCTCTCCATTACT+TGG + chr1.2:61990530-61990549 MS.gene07586:CDS 40.0%
CTTCCTACCAAGTTAACTGT+GGG + chr1.2:61990841-61990860 MS.gene07586:CDS 40.0%
GAGATATAGAGACTTCTTGG+AGG - chr1.2:61990308-61990327 None:intergenic 40.0%
GGTGTACTTGAAATAAAGGG+TGG + chr1.2:61991048-61991067 MS.gene07586:CDS 40.0%
GTTATCCAATCCCAATAGCA+AGG - chr1.2:61990565-61990584 None:intergenic 40.0%
TACGAAGTCTAGCAACTTCT+TGG - chr1.2:61990708-61990727 None:intergenic 40.0%
TCTTCCTACCAAGTTAACTG+TGG + chr1.2:61990840-61990859 MS.gene07586:CDS 40.0%
! GGATTTCTGGAGATTGAGAT+GGG + chr1.2:61990982-61991001 MS.gene07586:CDS 40.0%
! TGGATTTCTGGAGATTGAGA+TGG + chr1.2:61990981-61991000 MS.gene07586:CDS 40.0%
!! AGTGAGAAGTGATGGATTTC+TGG + chr1.2:61990969-61990988 MS.gene07586:CDS 40.0%
AAGGGTGGTCAAAACAAAGG+TGG + chr1.2:61991063-61991082 MS.gene07586:CDS 45.0%
AGGCTCTCACTTGTTTCCAA+AGG + chr1.2:61990172-61990191 MS.gene07586:CDS 45.0%
ATAAGATCTGACCTGGACTC+TGG - chr1.2:61990592-61990611 None:intergenic 45.0%
CGTCCAAAAGTGAGAAGTGA+TGG + chr1.2:61990961-61990980 MS.gene07586:CDS 45.0%
GAACGAAATGACGAGTTCCA+AGG + chr1.2:61990931-61990950 MS.gene07586:CDS 45.0%
TGGGTCCAACCAAACATTCT+TGG - chr1.2:61990896-61990915 None:intergenic 45.0%
! ACACCCACAGTTAACTTGGT+AGG - chr1.2:61990847-61990866 None:intergenic 45.0%
! CAACTCCAGTCGATTCATGT+AGG + chr1.2:61990152-61990171 MS.gene07586:CDS 45.0%
! CTTTTGGACGTTCTAGTCCT+TGG - chr1.2:61990951-61990970 None:intergenic 45.0%
!! ACACTCCTTGCTATTGGGAT+TGG + chr1.2:61990557-61990576 MS.gene07586:CDS 45.0%
AAACAGTGAGGACGCAGACT+GGG - chr1.2:61990275-61990294 None:intergenic 50.0%
AAGCACGATAGAGGCTTTGC+CGG + chr1.2:61990099-61990118 MS.gene07586:CDS 50.0%
AGCGGCAGAACAAAAGCCTT+TGG - chr1.2:61990191-61990210 None:intergenic 50.0%
ATCTGACCTGGACTCTGGTA+GGG - chr1.2:61990587-61990606 None:intergenic 50.0%
ATCTTGGCAATGCATCCCTC+CGG - chr1.2:61990121-61990140 None:intergenic 50.0%
GAGAGCCTACATGAATCGAC+TGG - chr1.2:61990160-61990179 None:intergenic 50.0%
TAAACAGTGAGGACGCAGAC+TGG - chr1.2:61990276-61990295 None:intergenic 50.0%
TAGAGACTTCTTGGAGGGAG+AGG - chr1.2:61990302-61990321 None:intergenic 50.0%
! TCTTGGTAGATACACCGGCT+TGG - chr1.2:61990879-61990898 None:intergenic 50.0%
!! AGGAGTGTCACCCCAAGTAA+TGG - chr1.2:61990545-61990564 None:intergenic 50.0%
!! GGGTGACACTCCTTGCTATT+GGG + chr1.2:61990552-61990571 MS.gene07586:CDS 50.0%
ACGATAGAGGCTTTGCCGGA+GGG + chr1.2:61990103-61990122 MS.gene07586:CDS 55.0%
AGACTTCTTGGAGGGAGAGG+TGG - chr1.2:61990299-61990318 None:intergenic 55.0%
CTAGACTTCGTACGGTCTGC+TGG + chr1.2:61990716-61990735 MS.gene07586:CDS 55.0%
GATCTGACCTGGACTCTGGT+AGG - chr1.2:61990588-61990607 None:intergenic 55.0%
GGATAACCCTACCAGAGTCC+AGG + chr1.2:61990578-61990597 MS.gene07586:CDS 55.0%
GGGAGAGGTGGTAAACAGTG+AGG - chr1.2:61990287-61990306 None:intergenic 55.0%
GGTGTACTTGGAGACCAAGC+CGG + chr1.2:61990862-61990881 MS.gene07586:CDS 55.0%
! GGGGTGACACTCCTTGCTAT+TGG + chr1.2:61990551-61990570 MS.gene07586:CDS 55.0%
CACGATAGAGGCTTTGCCGG+AGG + chr1.2:61990102-61990121 MS.gene07586:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 61990085 61991125 61990085 ID=MS.gene07586
chr1.2 mRNA 61990085 61991125 61990085 ID=MS.gene07586.t1;Parent=MS.gene07586
chr1.2 exon 61990085 61990369 61990085 ID=MS.gene07586.t1.exon1;Parent=MS.gene07586.t1
chr1.2 CDS 61990085 61990369 61990085 ID=cds.MS.gene07586.t1;Parent=MS.gene07586.t1
chr1.2 exon 61990481 61990599 61990481 ID=MS.gene07586.t1.exon2;Parent=MS.gene07586.t1
chr1.2 CDS 61990481 61990599 61990481 ID=cds.MS.gene07586.t1;Parent=MS.gene07586.t1
chr1.2 exon 61990702 61991125 61990702 ID=MS.gene07586.t1.exon3;Parent=MS.gene07586.t1
chr1.2 CDS 61990702 61991125 61990702 ID=cds.MS.gene07586.t1;Parent=MS.gene07586.t1
Gene Sequence

>MS.gene07586

ATGGAAGAAGAAAAAAGCACGATAGAGGCTTTGCCGGAGGGATGCATTGCCAAGATATTGTCGCATACAACTCCAGTCGATTCATGTAGGCTCTCACTTGTTTCCAAAGGCTTTTGTTCTGCCGCTGAATCAGATATTGTTTGGGATCGTTTTCTCCCATCCGATTTGATCTCAATCATTTCTGATTCCCAGTCTGCGTCCTCACTGTTTACCACCTCTCCCTCCAAGAAGTCTCTATATCTCACTCTCTCTGACGATCCCATCATAATCAACAATGGTAAAAAGGTATCATTCTCACAAACTACCAAATCAAGTTGTCGATTTTTGCTATAATAATTATTCATTATAGTTAGAATGTTAAACTTGACTCTTTATTATGGTGCCGCTAAATTTCAGAGCTTTCAATTAGAGAAACGGAGTGGTAAAAAGGTATACATGCTTAGTGCTAGAGATCTCTCCATTACTTGGGGTGACACTCCTTGCTATTGGGATTGGATAACCCTACCAGAGTCCAGGTCAGATCTTATTTAGATTTTCTTTACTAGTAGTAATTGATTTTCTCCAATCCTACCAAAATCAATCAGCAGTAAATGATTTTGTTCACAACTTTTGAACAGATTCCAAGAAGTTGCTAGACTTCGTACGGTCTGCTGGTTTGAAATTTATGGGCATATTAATAAACGTGTTTTATCCTCAAATACTCAATACGTAGCTTTTCTCGTGTTTAAGATGATCAATGCCTATCGTTTTGAAGATCTTCCTACCAAGTTAACTGTGGGTGTACTTGGAGACCAAGCCGGTGTATCTACCAAGAATGTTTGGTTGGACCCAGACTATGATGATAGAGAACGAAATGACGAGTTCCAAGGACTAGAACGTCCAAAAGTGAGAAGTGATGGATTTCTGGAGATTGAGATGGGAGAGTTCTTCAATTCAGGCCTAGAAGATGAAGTTGTTGAGATGGGTGTACTTGAAATAAAGGGTGGTCAAAACAAAGGTGGTTTCATTCTTGAAGGAATAGAAATAAGACCTAAGAAGTGA
Protein sequence

>MS.gene07586.t1

MEEEKSTIEALPEGCIAKILSHTTPVDSCRLSLVSKGFCSAAESDIVWDRFLPSDLISIISDSQSASSLFTTSPSKKSLYLTLSDDPIIINNGKKSFQLEKRSGKKVYMLSARDLSITWGDTPCYWDWITLPESRFQEVARLRTVCWFEIYGHINKRVLSSNTQYVAFLVFKMINAYRFEDLPTKLTVGVLGDQAGVSTKNVWLDPDYDDRERNDEFQGLERPKVRSDGFLEIEMGEFFNSGLEDEVVEMGVLEIKGGQNKGGFILEGIEIRPKK