Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96708.t1 | XP_013469665.1 | 85.1 | 275 | 34 | 4 | 1 | 274 | 1 | 269 | 7.70E-124 | 453.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96708.t1 | Q9ZVQ6 | 41.6 | 274 | 136 | 6 | 4 | 274 | 14 | 266 | 3.2e-54 | 213.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96708.t1 | G8A220 | 85.1 | 275 | 34 | 4 | 1 | 274 | 1 | 269 | 5.6e-124 | 453.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96708.t1 | MTR_1g100597 | 85.091 | 275 | 34 | 4 | 1 | 274 | 1 | 269 | 1.95e-163 | 454 |
MS.gene96708.t1 | MTR_1g079180 | 69.675 | 277 | 66 | 4 | 1 | 274 | 1 | 262 | 5.23e-128 | 364 |
MS.gene96708.t1 | MTR_1g079370 | 68.248 | 274 | 75 | 2 | 1 | 274 | 1 | 262 | 9.45e-128 | 363 |
MS.gene96708.t1 | MTR_1g100613 | 76.349 | 241 | 54 | 2 | 20 | 258 | 5 | 244 | 2.01e-125 | 357 |
MS.gene96708.t1 | MTR_1g079260 | 66.909 | 275 | 84 | 3 | 1 | 274 | 1 | 269 | 2.66e-124 | 355 |
MS.gene96708.t1 | MTR_1g079460 | 67.148 | 277 | 74 | 3 | 1 | 274 | 1 | 263 | 1.88e-123 | 353 |
MS.gene96708.t1 | MTR_1g079230 | 66.058 | 274 | 89 | 3 | 1 | 274 | 1 | 270 | 4.66e-122 | 350 |
MS.gene96708.t1 | MTR_1g079200 | 66.667 | 279 | 70 | 5 | 1 | 274 | 1 | 261 | 4.71e-120 | 344 |
MS.gene96708.t1 | MTR_1g079850 | 65.371 | 283 | 84 | 6 | 1 | 274 | 1 | 278 | 5.41e-116 | 335 |
MS.gene96708.t1 | MTR_1g079380 | 67.153 | 274 | 78 | 3 | 1 | 274 | 1 | 262 | 1.51e-114 | 332 |
MS.gene96708.t1 | MTR_3g006850 | 63.333 | 300 | 79 | 6 | 3 | 274 | 16 | 312 | 1.67e-114 | 332 |
MS.gene96708.t1 | MTR_3g452600 | 59.041 | 271 | 95 | 3 | 4 | 274 | 10 | 264 | 2.08e-99 | 292 |
MS.gene96708.t1 | MTR_1g026510 | 57.544 | 285 | 105 | 6 | 1 | 274 | 1 | 280 | 7.63e-99 | 291 |
MS.gene96708.t1 | MTR_1g079250 | 61.786 | 280 | 96 | 5 | 1 | 274 | 1 | 275 | 2.30e-98 | 290 |
MS.gene96708.t1 | MTR_2g079100 | 56.159 | 276 | 99 | 4 | 3 | 276 | 8 | 263 | 2.47e-92 | 274 |
MS.gene96708.t1 | MTR_1g079410 | 53.986 | 276 | 107 | 6 | 5 | 274 | 9 | 270 | 3.29e-89 | 266 |
MS.gene96708.t1 | MTR_3g450990 | 53.287 | 289 | 99 | 5 | 4 | 274 | 10 | 280 | 1.81e-87 | 262 |
MS.gene96708.t1 | MTR_1g079350 | 55.597 | 268 | 97 | 7 | 1 | 257 | 1 | 257 | 6.04e-85 | 255 |
MS.gene96708.t1 | MTR_1g079140 | 46.959 | 296 | 127 | 7 | 4 | 274 | 13 | 303 | 1.09e-77 | 238 |
MS.gene96708.t1 | MTR_7g096300 | 55.311 | 273 | 96 | 6 | 1 | 267 | 1 | 253 | 1.15e-77 | 250 |
MS.gene96708.t1 | MTR_1g079340 | 50.336 | 298 | 109 | 9 | 1 | 274 | 40 | 322 | 5.71e-76 | 234 |
MS.gene96708.t1 | MTR_1g079400 | 45.907 | 281 | 124 | 5 | 5 | 274 | 13 | 276 | 9.30e-73 | 224 |
MS.gene96708.t1 | MTR_7g112550 | 46.099 | 282 | 137 | 8 | 2 | 274 | 5 | 280 | 1.43e-67 | 211 |
MS.gene96708.t1 | MTR_1g078470 | 58.791 | 182 | 58 | 3 | 93 | 274 | 17 | 181 | 4.43e-63 | 196 |
MS.gene96708.t1 | MTR_1g083580 | 41.219 | 279 | 152 | 7 | 2 | 274 | 6 | 278 | 5.10e-63 | 200 |
MS.gene96708.t1 | MTR_1g079240 | 54.787 | 188 | 62 | 4 | 87 | 274 | 12 | 176 | 7.13e-55 | 175 |
MS.gene96708.t1 | MTR_7g112560 | 37.591 | 274 | 148 | 8 | 4 | 274 | 1 | 254 | 2.90e-52 | 171 |
MS.gene96708.t1 | MTR_1g076870 | 64.493 | 138 | 35 | 3 | 128 | 255 | 2 | 135 | 1.05e-51 | 166 |
MS.gene96708.t1 | MTR_4g023570 | 36.861 | 274 | 130 | 8 | 4 | 274 | 1 | 234 | 3.06e-47 | 158 |
MS.gene96708.t1 | MTR_1g079350 | 60.902 | 133 | 47 | 2 | 1 | 128 | 1 | 133 | 6.79e-43 | 146 |
MS.gene96708.t1 | MTR_1g079210 | 61.789 | 123 | 45 | 1 | 129 | 249 | 7 | 129 | 2.86e-40 | 137 |
MS.gene96708.t1 | MTR_1g079130 | 44.737 | 190 | 85 | 6 | 101 | 274 | 1 | 186 | 7.38e-40 | 137 |
MS.gene96708.t1 | MTR_7g096310 | 56.557 | 122 | 49 | 2 | 67 | 186 | 44 | 163 | 8.54e-34 | 121 |
MS.gene96708.t1 | MTR_2g042540 | 61.905 | 105 | 38 | 2 | 1 | 103 | 1 | 105 | 1.35e-32 | 117 |
MS.gene96708.t1 | MTR_3g058640 | 54.464 | 112 | 39 | 2 | 128 | 239 | 7 | 106 | 9.51e-31 | 111 |
MS.gene96708.t1 | MTR_1g078460 | 63.218 | 87 | 32 | 0 | 1 | 87 | 64 | 150 | 2.30e-30 | 111 |
MS.gene96708.t1 | MTR_7g103380 | 27.636 | 275 | 159 | 7 | 6 | 263 | 21 | 272 | 2.22e-28 | 110 |
MS.gene96708.t1 | MTR_0113s0040 | 30.846 | 201 | 124 | 3 | 2 | 188 | 20 | 219 | 9.58e-25 | 100 |
MS.gene96708.t1 | MTR_1g101390 | 31.841 | 201 | 122 | 3 | 2 | 188 | 26 | 225 | 2.12e-23 | 97.1 |
MS.gene96708.t1 | MTR_0002s0020 | 28.230 | 209 | 130 | 3 | 6 | 195 | 24 | 231 | 7.56e-20 | 87.4 |
MS.gene96708.t1 | MTR_4g102770 | 33.103 | 145 | 93 | 2 | 6 | 147 | 21 | 164 | 5.16e-18 | 82.0 |
MS.gene96708.t1 | MTR_5g010800 | 32.192 | 146 | 92 | 4 | 6 | 147 | 19 | 161 | 6.22e-17 | 79.0 |
MS.gene96708.t1 | MTR_1g079220 | 53.846 | 78 | 24 | 1 | 165 | 242 | 1 | 66 | 6.82e-17 | 73.9 |
MS.gene96708.t1 | MTR_1g079390 | 67.308 | 52 | 13 | 2 | 221 | 272 | 8 | 55 | 2.33e-13 | 63.9 |
MS.gene96708.t1 | MTR_4g083970 | 26.404 | 178 | 100 | 4 | 80 | 255 | 122 | 270 | 1.17e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96708.t1 | AT2G02360 | 41.971 | 274 | 135 | 7 | 4 | 274 | 14 | 266 | 9.06e-68 | 211 |
MS.gene96708.t1 | AT1G80110 | 42.435 | 271 | 134 | 6 | 6 | 274 | 3 | 253 | 5.66e-61 | 194 |
MS.gene96708.t1 | AT2G02340 | 39.711 | 277 | 148 | 6 | 4 | 274 | 36 | 299 | 3.08e-58 | 188 |
MS.gene96708.t1 | AT2G02240 | 40.221 | 271 | 143 | 5 | 4 | 273 | 61 | 313 | 1.07e-57 | 187 |
MS.gene96708.t1 | AT1G09155 | 41.935 | 279 | 147 | 9 | 7 | 274 | 3 | 277 | 4.37e-57 | 185 |
MS.gene96708.t1 | AT2G02230 | 36.842 | 304 | 154 | 8 | 4 | 274 | 32 | 330 | 5.14e-55 | 181 |
MS.gene96708.t1 | AT2G02250 | 38.095 | 273 | 147 | 8 | 4 | 273 | 47 | 300 | 2.50e-53 | 176 |
MS.gene96708.t1 | AT1G56250 | 38.710 | 279 | 156 | 7 | 7 | 274 | 4 | 278 | 6.27e-50 | 166 |
MS.gene96708.t1 | AT2G02350 | 36.101 | 277 | 155 | 8 | 2 | 274 | 22 | 280 | 7.69e-50 | 166 |
MS.gene96708.t1 | AT1G56240 | 39.068 | 279 | 155 | 7 | 7 | 274 | 4 | 278 | 2.43e-49 | 165 |
MS.gene96708.t1 | AT2G02320 | 36.957 | 276 | 146 | 10 | 6 | 274 | 42 | 296 | 2.95e-45 | 155 |
MS.gene96708.t1 | AT2G02310 | 33.700 | 273 | 161 | 6 | 4 | 273 | 45 | 300 | 2.74e-44 | 152 |
MS.gene96708.t1 | AT5G24560 | 42.708 | 192 | 97 | 4 | 4 | 192 | 3 | 184 | 6.81e-42 | 142 |
MS.gene96708.t1 | AT2G02300 | 33.818 | 275 | 146 | 7 | 4 | 273 | 34 | 277 | 2.48e-38 | 136 |
MS.gene96708.t1 | AT3G53000 | 28.777 | 278 | 157 | 6 | 3 | 263 | 20 | 273 | 6.86e-29 | 112 |
MS.gene96708.t1 | AT1G63090 | 30.000 | 230 | 130 | 8 | 3 | 216 | 25 | 239 | 1.72e-20 | 89.0 |
MS.gene96708.t1 | AT2G02350 | 30.899 | 178 | 104 | 7 | 101 | 274 | 1 | 163 | 2.59e-20 | 86.3 |
MS.gene96708.t1 | AT5G52120 | 28.365 | 208 | 128 | 4 | 1 | 188 | 18 | 224 | 1.27e-19 | 86.7 |
MS.gene96708.t1 | AT1G12710 | 29.703 | 202 | 124 | 4 | 3 | 189 | 27 | 225 | 1.79e-19 | 86.3 |
MS.gene96708.t1 | AT3G61060 | 24.885 | 217 | 138 | 4 | 6 | 203 | 27 | 237 | 6.89e-18 | 82.0 |
MS.gene96708.t1 | AT3G61060 | 23.963 | 217 | 141 | 3 | 6 | 203 | 27 | 238 | 1.23e-16 | 78.6 |
MS.gene96708.t1 | AT1G12710 | 29.814 | 161 | 107 | 3 | 3 | 160 | 27 | 184 | 3.04e-13 | 69.3 |
Find 85 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGCTGCATACTGAGTATT+TGG | 0.255011 | 3.3:-26922235 | None:intergenic |
TAGATCTCTCACCATTGTTT+GGG | 0.275113 | 3.3:+26921408 | MS.gene96708:CDS |
CTAGATCTCTCACCATTGTT+TGG | 0.276765 | 3.3:+26921407 | MS.gene96708:CDS |
CCGCTGGTTCCGACGCCGTC+TGG | 0.296646 | 3.3:+26919543 | MS.gene96708:CDS |
TAGCACTAAAATTGTTTGTT+TGG | 0.300698 | 3.3:+26922339 | MS.gene96708:CDS |
TTATCTCGATAACACTCATT+TGG | 0.327990 | 3.3:-26922525 | None:intergenic |
ATGGGAGAGTTCTTTAATTC+CGG | 0.330151 | 3.3:+26922484 | MS.gene96708:CDS |
CATCATCGACAATGGCAAAA+AGG | 0.333268 | 3.3:+26919673 | MS.gene96708:CDS |
GGAAAGATAGAGAGCCTTCT+TGG | 0.334597 | 3.3:-26919633 | None:intergenic |
GCTCTCTATCTTTCCCTATC+TGG | 0.350962 | 3.3:+26919641 | MS.gene96708:CDS |
CACTTTCATGCCAGAGTAAG+AGG | 0.352461 | 3.3:+26922415 | MS.gene96708:CDS |
CTTGTGTACAAATTGATTGA+TGG | 0.360572 | 3.3:+26922259 | MS.gene96708:CDS |
GGACTGCTACGCCTGATTCC+AGG | 0.374888 | 3.3:+26921455 | MS.gene96708:CDS |
AATGAGTGTTATCGAGATAA+AGG | 0.376128 | 3.3:+26922528 | MS.gene96708:CDS |
GGTATGGCCAACCTGGAATC+AGG | 0.384586 | 3.3:-26921466 | None:intergenic |
AGACGAAGATTAGCAACTTC+GGG | 0.388577 | 3.3:-26922163 | None:intergenic |
TGAAATGCAGAGCTTTCAAT+TGG | 0.399907 | 3.3:+26921348 | MS.gene96708:intron |
AAGACTTTCCTTTCTGCCGC+TGG | 0.414004 | 3.3:+26919527 | MS.gene96708:CDS |
AAGGGGAATTTCTTTCTTGA+AGG | 0.425306 | 3.3:+26922568 | MS.gene96708:CDS |
TGATGATAGGTCGACCAGAT+AGG | 0.431795 | 3.3:-26919655 | None:intergenic |
CGGAGTCGTACCTGACAGTA+TGG | 0.431895 | 3.3:-26919474 | None:intergenic |
TTGCCATTGTCGATGATGAT+AGG | 0.438483 | 3.3:-26919668 | None:intergenic |
ATGATGACCGCAATTGGATC+TGG | 0.445724 | 3.3:+26921434 | MS.gene96708:CDS |
GGGGTGATGATGACCGCAAT+TGG | 0.456509 | 3.3:+26921428 | MS.gene96708:CDS |
GAGAGTCTGACGGCATCAAC+CGG | 0.458783 | 3.3:-26919494 | None:intergenic |
GCTGCTTAATTGACTACCTT+AGG | 0.468994 | 3.3:-26922603 | None:intergenic |
TACAAATTGATTGATGGCTA+TGG | 0.469002 | 3.3:+26922265 | MS.gene96708:CDS |
AAAGAAATTCCCCTTGCCCT+TGG | 0.479998 | 3.3:-26922560 | None:intergenic |
TGAGATGATAGAGTTGATGT+CGG | 0.480687 | 3.3:-26919582 | None:intergenic |
TGCGTTTCCGCCATACTGTC+AGG | 0.483373 | 3.3:+26919464 | MS.gene96708:CDS |
CTTCCTAGTGTGAGAAGTGA+TGG | 0.488428 | 3.3:+26922445 | MS.gene96708:CDS |
ATGATAGAGTTGATGTCGGA+AGG | 0.503360 | 3.3:-26919578 | None:intergenic |
AGCGGCAGAAAGGAAAGTCT+TGG | 0.509093 | 3.3:-26919525 | None:intergenic |
AAGACGAAGATTAGCAACTT+CGG | 0.509597 | 3.3:-26922164 | None:intergenic |
AAGCGGCAATCCTCTTACTC+TGG | 0.511127 | 3.3:-26922425 | None:intergenic |
GATTTATCTGTCAGCGTCGA+AGG | 0.513667 | 3.3:+26922307 | MS.gene96708:CDS |
GTGTGGTGGCTTGAAATTCG+TGG | 0.524956 | 3.3:+26922187 | MS.gene96708:CDS |
TGATAGAGTTGATGTCGGAA+GGG | 0.527503 | 3.3:-26919577 | None:intergenic |
CGTCGGAACCAGCGGCAGAA+AGG | 0.533058 | 3.3:-26919535 | None:intergenic |
GGGTTTGAAGATTTAGCAGA+AGG | 0.534561 | 3.3:+26919440 | MS.gene96708:CDS |
GATGATAGGTCGACCAGATA+GGG | 0.534603 | 3.3:-26919654 | None:intergenic |
TGGGTTTGACAACCTTCCTG+TGG | 0.536265 | 3.3:+26922285 | MS.gene96708:CDS |
GGGTGGTTGGAGATTGAGAT+GGG | 0.540728 | 3.3:+26922466 | MS.gene96708:CDS |
TCTTGGAAGGAGCGTTTGCA+AGG | 0.540828 | 3.3:-26919616 | None:intergenic |
TGGGTGGTTGGAGATTGAGA+TGG | 0.542699 | 3.3:+26922465 | MS.gene96708:CDS |
CTAATCTTCGTCTTGTGTGG+TGG | 0.545405 | 3.3:+26922173 | MS.gene96708:CDS |
TGGCAGAACATAAGACCTTA+CGG | 0.545478 | 3.3:+26922379 | MS.gene96708:CDS |
TGCAAACGCTCCTTCCAAGA+AGG | 0.546290 | 3.3:+26919619 | MS.gene96708:CDS |
GGCTGATGAGACCAAGGGCA+AGG | 0.547478 | 3.3:+26922549 | MS.gene96708:CDS |
AAGGAATAGAAGTTAGCCTA+AGG | 0.550436 | 3.3:+26922587 | MS.gene96708:CDS |
ACAAATTGATTGATGGCTAT+GGG | 0.555428 | 3.3:+26922266 | MS.gene96708:CDS |
TGTGAGAAGTGATGGGTGGT+TGG | 0.556049 | 3.3:+26922453 | MS.gene96708:CDS |
GCTGATGAGACCAAGGGCAA+GGG | 0.564677 | 3.3:+26922550 | MS.gene96708:CDS |
TTGCTAATCTTCGTCTTGTG+TGG | 0.565369 | 3.3:+26922170 | MS.gene96708:CDS |
TTTCAATTGGATAGAAAGAG+TGG | 0.566622 | 3.3:+26921361 | MS.gene96708:CDS |
TGGATCTAAATGCAGAACTC+TGG | 0.571344 | 3.3:+26922359 | MS.gene96708:CDS |
AGATCTCTCACCATTGTTTG+GGG | 0.577774 | 3.3:+26921409 | MS.gene96708:CDS |
AGATAGAGAGCCTTCTTGGA+AGG | 0.578296 | 3.3:-26919629 | None:intergenic |
TGTGGTGGCTTGAAATTCGT+GGG | 0.578760 | 3.3:+26922188 | MS.gene96708:CDS |
GAAGGAGCGTTTGCAAGGGA+AGG | 0.581170 | 3.3:-26919611 | None:intergenic |
CCAGACGGCGTCGGAACCAG+CGG | 0.586168 | 3.3:-26919543 | None:intergenic |
CACCCATCACTTCTCACACT+AGG | 0.587099 | 3.3:-26922448 | None:intergenic |
GTCATCATCACCCCAAACAA+TGG | 0.601787 | 3.3:-26921419 | None:intergenic |
CTGATGAGACCAAGGGCAAG+GGG | 0.605840 | 3.3:+26922551 | MS.gene96708:CDS |
CGACCTATCATCATCGACAA+TGG | 0.606471 | 3.3:+26919665 | MS.gene96708:CDS |
CTTGGAAGGAGCGTTTGCAA+GGG | 0.607196 | 3.3:-26919615 | None:intergenic |
TCACTTCTCACACTAGGAAG+CGG | 0.609028 | 3.3:-26922442 | None:intergenic |
GATAAAGGCTGATGAGACCA+AGG | 0.627506 | 3.3:+26922543 | MS.gene96708:CDS |
CTGGCATGAAAGTGAAACCT+CGG | 0.633049 | 3.3:-26922406 | None:intergenic |
TGAAACCTCGGATAACCGTA+AGG | 0.633862 | 3.3:-26922394 | None:intergenic |
TAAGACCTTACGGTTATCCG+AGG | 0.638229 | 3.3:+26922389 | MS.gene96708:CDS |
ACGCTGACAGATAAATCCAC+AGG | 0.639733 | 3.3:-26922301 | None:intergenic |
ATACTGAGTATTTGGAGACA+AGG | 0.643026 | 3.3:-26922227 | None:intergenic |
TTCCTAGTGTGAGAAGTGAT+GGG | 0.648895 | 3.3:+26922446 | MS.gene96708:CDS |
TTATCTGTCAGCGTCGAAGG+TGG | 0.649856 | 3.3:+26922310 | MS.gene96708:CDS |
CATACTGTCAGGTACGACTC+CGG | 0.664253 | 3.3:+26919475 | MS.gene96708:CDS |
AGGGAGAAAGTGATTCCAGA+CGG | 0.678403 | 3.3:-26919558 | None:intergenic |
CTAGTGTGAGAAGTGATGGG+TGG | 0.686032 | 3.3:+26922449 | MS.gene96708:CDS |
GGAAACGAGAGAGAGTCTGA+CGG | 0.687055 | 3.3:-26919504 | None:intergenic |
ATAAAGGCTGATGAGACCAA+GGG | 0.691374 | 3.3:+26922544 | MS.gene96708:CDS |
GACGAAGATTAGCAACTTCG+GGG | 0.697062 | 3.3:-26922162 | None:intergenic |
TGACAGATAAATCCACAGGA+AGG | 0.697091 | 3.3:-26922297 | None:intergenic |
AAAGTGATTCCAGACGGCGT+CGG | 0.699045 | 3.3:-26919552 | None:intergenic |
AGTCGTACCTGACAGTATGG+CGG | 0.716869 | 3.3:-26919471 | None:intergenic |
TAGCAGTCCAGATCCAATTG+CGG | 0.717574 | 3.3:-26921441 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATTTATTAAAAAAAA+TGG | + | chr3.3:26920748-26920767 | MS.gene96708:intron | 0.0% |
!! | AAACCATAATATTAAAATAA+CGG | + | chr3.3:26920724-26920743 | MS.gene96708:intron | 10.0% |
!! | CATTAGATATATTATTAAAT+GGG | + | chr3.3:26920149-26920168 | MS.gene96708:intron | 10.0% |
!! | CTTATTATATATTAATCAAT+TGG | - | chr3.3:26920927-26920946 | None:intergenic | 10.0% |
!!! | AATTATTTTGATTAATTTGT+AGG | - | chr3.3:26920179-26920198 | None:intergenic | 10.0% |
!!! | ATTATTTTGATTAATTTGTA+GGG | - | chr3.3:26920178-26920197 | None:intergenic | 10.0% |
!! | AAAAGAAATAAAGTAGTAAA+TGG | + | chr3.3:26921034-26921053 | MS.gene96708:intron | 15.0% |
!! | AATAAAAATGAGTAAATTTC+GGG | - | chr3.3:26921502-26921521 | None:intergenic | 15.0% |
!! | ATTGATTGTTGTAAAATATA+TGG | + | chr3.3:26921272-26921291 | MS.gene96708:intron | 15.0% |
!! | CAATAAAAATGAGTAAATTT+CGG | - | chr3.3:26921503-26921522 | None:intergenic | 15.0% |
!! | GCATTAGATATATTATTAAA+TGG | + | chr3.3:26920148-26920167 | MS.gene96708:intron | 15.0% |
!! | TTCAAATCAATTCTTATAAA+TGG | - | chr3.3:26920465-26920484 | None:intergenic | 15.0% |
!!! | TAATTTTTGTGATGTAAATT+AGG | + | chr3.3:26920349-26920368 | MS.gene96708:intron | 15.0% |
!!! | TTACCGTTATTTTAATATTA+TGG | - | chr3.3:26920730-26920749 | None:intergenic | 15.0% |
!!! | TTATTTTGATTAATTTGTAG+GGG | - | chr3.3:26920177-26920196 | None:intergenic | 15.0% |
!! | AAATAAATTACACACATATG+TGG | + | chr3.3:26920621-26920640 | MS.gene96708:intron | 20.0% |
!! | AACAATGTTAAAACAAACAA+AGG | - | chr3.3:26921541-26921560 | None:intergenic | 20.0% |
!! | AGTTATCATTGTACAATATA+TGG | + | chr3.3:26921897-26921916 | MS.gene96708:intron | 20.0% |
!! | ATAAAAATGAGTAAATTTCG+GGG | - | chr3.3:26921501-26921520 | None:intergenic | 20.0% |
!! | GAACAAACAAATAAACAAAA+TGG | - | chr3.3:26920204-26920223 | None:intergenic | 20.0% |
!! | GTGTGCAAAATAATAAAAAT+AGG | + | chr3.3:26921168-26921187 | MS.gene96708:intron | 20.0% |
!!! | AGTAACATTAATACTTTTGA+GGG | - | chr3.3:26920442-26920461 | None:intergenic | 20.0% |
!!! | ATAACATGTATATTTTTTCC+TGG | + | chr3.3:26921191-26921210 | MS.gene96708:intron | 20.0% |
!!! | CGAAATTTACTCATTTTTAT+TGG | + | chr3.3:26921501-26921520 | MS.gene96708:intron | 20.0% |
!!! | TAACATGTATATTTTTTCCT+GGG | + | chr3.3:26921192-26921211 | MS.gene96708:intron | 20.0% |
! | AAGAGTGAAGTAAAATATTG+AGG | + | chr3.3:26921145-26921164 | MS.gene96708:intron | 25.0% |
! | AGAGTGAAGTAAAATATTGA+GGG | + | chr3.3:26921146-26921165 | MS.gene96708:intron | 25.0% |
! | AGTGAGAAGTTTATCATAAT+CGG | + | chr3.3:26921856-26921875 | MS.gene96708:intron | 25.0% |
! | ATATGAAATATCCAAGGAAA+TGG | - | chr3.3:26921584-26921603 | None:intergenic | 25.0% |
! | ATCATTTAGACGAGATAATA+AGG | - | chr3.3:26920517-26920536 | None:intergenic | 25.0% |
! | ATGTAAGCTATAGAAAATAC+AGG | - | chr3.3:26920280-26920299 | None:intergenic | 25.0% |
! | TAAAAATGAGTAAATTTCGG+GGG | - | chr3.3:26921500-26921519 | None:intergenic | 25.0% |
! | TAATAAGTTGTATTAGACAG+TGG | - | chr3.3:26921836-26921855 | None:intergenic | 25.0% |
! | TAGCACTAAAATTGTTTGTT+TGG | + | chr3.3:26922339-26922358 | MS.gene96708:CDS | 25.0% |
! | TATTAATCAATTGGAAGTTC+AGG | - | chr3.3:26920918-26920937 | None:intergenic | 25.0% |
! | TCATTTAGACGAGATAATAA+GGG | - | chr3.3:26920516-26920535 | None:intergenic | 25.0% |
! | TCTACTTCAGATAAAAGATT+TGG | + | chr3.3:26920840-26920859 | MS.gene96708:intron | 25.0% |
! | TGATACATATAATGTTTACC+TGG | + | chr3.3:26920805-26920824 | MS.gene96708:intron | 25.0% |
! | TTGATTGTTCTTTCATGTTA+GGG | + | chr3.3:26919764-26919783 | MS.gene96708:intron | 25.0% |
!! | AATGCTAATAATATGCCTTT+TGG | + | chr3.3:26921319-26921338 | MS.gene96708:intron | 25.0% |
!! | ATGCTAATAATATGCCTTTT+GGG | + | chr3.3:26921320-26921339 | MS.gene96708:intron | 25.0% |
!! | GAGTAACATTAATACTTTTG+AGG | - | chr3.3:26920443-26920462 | None:intergenic | 25.0% |
!! | GTTATTACTCTTTTTGATGT+TGG | + | chr3.3:26921979-26921998 | MS.gene96708:intron | 25.0% |
!! | TTGAATGTAATCAAAAGTGT+CGG | - | chr3.3:26920041-26920060 | None:intergenic | 25.0% |
!!! | AAACAATTTTAGTGCTACTA+TGG | - | chr3.3:26922336-26922355 | None:intergenic | 25.0% |
!!! | AAACATATTTTTGTCTCTTC+TGG | - | chr3.3:26921072-26921091 | None:intergenic | 25.0% |
!!! | AATAGAAGTATTCACTTAGA+AGG | - | chr3.3:26921757-26921776 | None:intergenic | 25.0% |
!!! | GAGTTGTTTCAAAGTTTTTT+TGG | + | chr3.3:26921941-26921960 | MS.gene96708:intron | 25.0% |
!!! | GATTTTTTCAATGCTTAGTT+CGG | + | chr3.3:26921296-26921315 | MS.gene96708:intron | 25.0% |
AAAAATGAGTAAATTTCGGG+GGG | - | chr3.3:26921499-26921518 | None:intergenic | 30.0% | |
AATGAGTGTTATCGAGATAA+AGG | + | chr3.3:26922528-26922547 | MS.gene96708:CDS | 30.0% | |
ACTCAGATATGAAATATCCA+AGG | - | chr3.3:26921590-26921609 | None:intergenic | 30.0% | |
AGCTGTAAATGATTTATGTG+AGG | + | chr3.3:26921109-26921128 | MS.gene96708:intron | 30.0% | |
AGGATTCATAACATCACAAA+TGG | - | chr3.3:26922078-26922097 | None:intergenic | 30.0% | |
AGTAGATACATCAAATTACC+AGG | - | chr3.3:26920826-26920845 | None:intergenic | 30.0% | |
ATGACGATTGAAAACATGTT+TGG | + | chr3.3:26919999-26920018 | MS.gene96708:intron | 30.0% | |
ATTATAATCTAACTCGACGA+GGG | - | chr3.3:26920404-26920423 | None:intergenic | 30.0% | |
CTGTAAATGATTTATGTGAG+GGG | + | chr3.3:26921111-26921130 | MS.gene96708:intron | 30.0% | |
CTTGTGTACAAATTGATTGA+TGG | + | chr3.3:26922259-26922278 | MS.gene96708:CDS | 30.0% | |
GCTGTAAATGATTTATGTGA+GGG | + | chr3.3:26921110-26921129 | MS.gene96708:intron | 30.0% | |
GTTAAAACAAACAAAGGAGA+AGG | - | chr3.3:26921535-26921554 | None:intergenic | 30.0% | |
GTTGATTGTTCTTTCATGTT+AGG | + | chr3.3:26919763-26919782 | MS.gene96708:intron | 30.0% | |
TATCTCGTCTAAATGATCTT+GGG | + | chr3.3:26920520-26920539 | MS.gene96708:intron | 30.0% | |
TATTATAATCTAACTCGACG+AGG | - | chr3.3:26920405-26920424 | None:intergenic | 30.0% | |
TGCATTTCAATATACCCAAA+AGG | - | chr3.3:26921337-26921356 | None:intergenic | 30.0% | |
TTATCTCGATAACACTCATT+TGG | - | chr3.3:26922528-26922547 | None:intergenic | 30.0% | |
TTATCTCGTCTAAATGATCT+TGG | + | chr3.3:26920519-26920538 | MS.gene96708:intron | 30.0% | |
TTTCAATTGGATAGAAAGAG+TGG | + | chr3.3:26921361-26921380 | MS.gene96708:CDS | 30.0% | |
! | ACAAATTGATTGATGGCTAT+GGG | + | chr3.3:26922266-26922285 | MS.gene96708:CDS | 30.0% |
! | CATCATCGTCTGAAATATTA+GGG | + | chr3.3:26919711-26919730 | MS.gene96708:intron | 30.0% |
! | TACAAATTGATTGATGGCTA+TGG | + | chr3.3:26922265-26922284 | MS.gene96708:CDS | 30.0% |
! | TCATCATCGTCTGAAATATT+AGG | + | chr3.3:26919710-26919729 | MS.gene96708:intron | 30.0% |
! | TTTGGACTTCTTCATTTTCA+AGG | - | chr3.3:26922510-26922529 | None:intergenic | 30.0% |
AAAACAAACAAAGGAGAAGG+TGG | - | chr3.3:26921532-26921551 | None:intergenic | 35.0% | |
AAAATGAGTAAATTTCGGGG+GGG | - | chr3.3:26921498-26921517 | None:intergenic | 35.0% | |
AACCTCAATAACAGTGATGT+TGG | + | chr3.3:26921809-26921828 | MS.gene96708:intron | 35.0% | |
AAGACGAAGATTAGCAACTT+CGG | - | chr3.3:26922167-26922186 | None:intergenic | 35.0% | |
AAGGGGAATTTCTTTCTTGA+AGG | + | chr3.3:26922568-26922587 | MS.gene96708:CDS | 35.0% | |
AGATGAAAGTTTCCTTGATG+AGG | - | chr3.3:26921638-26921657 | None:intergenic | 35.0% | |
ATACTGAGTATTTGGAGACA+AGG | - | chr3.3:26922230-26922249 | None:intergenic | 35.0% | |
ATGGGAGAGTTCTTTAATTC+CGG | + | chr3.3:26922484-26922503 | MS.gene96708:CDS | 35.0% | |
GAACTGAGAAAAAGTTGGAA+AGG | - | chr3.3:26922098-26922117 | None:intergenic | 35.0% | |
GATTTATGTGAGGGGATATT+TGG | + | chr3.3:26921119-26921138 | MS.gene96708:intron | 35.0% | |
TAAGCTGCATACTGAGTATT+TGG | - | chr3.3:26922238-26922257 | None:intergenic | 35.0% | |
TAGATCTCTCACCATTGTTT+GGG | + | chr3.3:26921408-26921427 | MS.gene96708:CDS | 35.0% | |
TCAGGTGTATGGTTAACTTT+GGG | - | chr3.3:26921784-26921803 | None:intergenic | 35.0% | |
TCGGCCAATATACATTTACA+GGG | - | chr3.3:26920239-26920258 | None:intergenic | 35.0% | |
TGAAATGCAGAGCTTTCAAT+TGG | + | chr3.3:26921348-26921367 | MS.gene96708:intron | 35.0% | |
TGATCTTATTCTCCTCATCA+AGG | + | chr3.3:26921623-26921642 | MS.gene96708:intron | 35.0% | |
TGCAAGAACTGAGAAAAAGT+TGG | - | chr3.3:26922103-26922122 | None:intergenic | 35.0% | |
TGTGCCCTGTAAATGTATAT+TGG | + | chr3.3:26920232-26920251 | MS.gene96708:intron | 35.0% | |
TGTTATTGAGGTTCAGATTC+AGG | - | chr3.3:26921802-26921821 | None:intergenic | 35.0% | |
TTCAGGTGTATGGTTAACTT+TGG | - | chr3.3:26921785-26921804 | None:intergenic | 35.0% | |
TTCGGCCAATATACATTTAC+AGG | - | chr3.3:26920240-26920259 | None:intergenic | 35.0% | |
TTTCTATAGCTTACATCCAG+TGG | + | chr3.3:26920284-26920303 | MS.gene96708:intron | 35.0% | |
! | AAGGAATAGAAGTTAGCCTA+AGG | + | chr3.3:26922587-26922606 | MS.gene96708:CDS | 35.0% |
! | GCATAGTAGCAGATTTTCTT+CGG | - | chr3.3:26920258-26920277 | None:intergenic | 35.0% |
!! | AAACATGTTTGGTGTATGAC+TGG | + | chr3.3:26920010-26920029 | MS.gene96708:intron | 35.0% |
!! | TGAGATGATAGAGTTGATGT+CGG | - | chr3.3:26919585-26919604 | None:intergenic | 35.0% |
!!! | TGTATATTTTTTCCTGGGTC+AGG | + | chr3.3:26921197-26921216 | MS.gene96708:intron | 35.0% |
AAACGAACATGGTGGTTCAA+CGG | - | chr3.3:26919931-26919950 | None:intergenic | 40.0% | |
AAATGAGTAAATTTCGGGGG+GGG | - | chr3.3:26921497-26921516 | None:intergenic | 40.0% | |
AGACGAAGATTAGCAACTTC+GGG | - | chr3.3:26922166-26922185 | None:intergenic | 40.0% | |
AGATCTCTCACCATTGTTTG+GGG | + | chr3.3:26921409-26921428 | MS.gene96708:CDS | 40.0% | |
ATAAAGGCTGATGAGACCAA+GGG | + | chr3.3:26922544-26922563 | MS.gene96708:CDS | 40.0% | |
CAGGTAACAATGCAGCAAAA+AGG | - | chr3.3:26920899-26920918 | None:intergenic | 40.0% | |
CATCATCGACAATGGCAAAA+AGG | + | chr3.3:26919673-26919692 | MS.gene96708:CDS | 40.0% | |
CATTGTTCTCTCTCCTTTCT+CGG | + | chr3.3:26921554-26921573 | MS.gene96708:intron | 40.0% | |
CGATAGTTACACATTGACAG+CGG | - | chr3.3:26920089-26920108 | None:intergenic | 40.0% | |
CTAGATCTCTCACCATTGTT+TGG | + | chr3.3:26921407-26921426 | MS.gene96708:CDS | 40.0% | |
CTCTACAAGCTAAACGAACA+TGG | - | chr3.3:26919942-26919961 | None:intergenic | 40.0% | |
GACCAACATCACTGTTATTG+AGG | - | chr3.3:26921814-26921833 | None:intergenic | 40.0% | |
GGGTTTGAAGATTTAGCAGA+AGG | + | chr3.3:26919440-26919459 | MS.gene96708:CDS | 40.0% | |
TACAAGCTAAACGAACATGG+TGG | - | chr3.3:26919939-26919958 | None:intergenic | 40.0% | |
TGACAGATAAATCCACAGGA+AGG | - | chr3.3:26922300-26922319 | None:intergenic | 40.0% | |
TGGATCTAAATGCAGAACTC+TGG | + | chr3.3:26922359-26922378 | MS.gene96708:CDS | 40.0% | |
TGGCAGAACATAAGACCTTA+CGG | + | chr3.3:26922379-26922398 | MS.gene96708:CDS | 40.0% | |
TTCCTAGTGTGAGAAGTGAT+GGG | + | chr3.3:26922446-26922465 | MS.gene96708:CDS | 40.0% | |
TTGCCATTGTCGATGATGAT+AGG | - | chr3.3:26919671-26919690 | None:intergenic | 40.0% | |
TTGCTAATCTTCGTCTTGTG+TGG | + | chr3.3:26922170-26922189 | MS.gene96708:CDS | 40.0% | |
! | ATGATCGATTTACACGCAGA+TGG | + | chr3.3:26920981-26921000 | MS.gene96708:intron | 40.0% |
! | CATCTCTGCAACTTTTGTGT+TGG | + | chr3.3:26922132-26922151 | MS.gene96708:intron | 40.0% |
! | CATTCAGAAGTGTAACTGCT+AGG | - | chr3.3:26919982-26920001 | None:intergenic | 40.0% |
!! | ATGATAGAGTTGATGTCGGA+AGG | - | chr3.3:26919581-26919600 | None:intergenic | 40.0% |
!! | GACTTCTTCATTTTCAAGGC+CGG | - | chr3.3:26922506-26922525 | None:intergenic | 40.0% |
!! | GGTCTTGTTAGCTTAATTCG+AGG | - | chr3.3:26920495-26920514 | None:intergenic | 40.0% |
!! | TGATAGAGTTGATGTCGGAA+GGG | - | chr3.3:26919580-26919599 | None:intergenic | 40.0% |
AAAGAAATTCCCCTTGCCCT+TGG | - | chr3.3:26922563-26922582 | None:intergenic | 45.0% | |
AATGAGTAAATTTCGGGGGG+GGG | - | chr3.3:26921496-26921515 | None:intergenic | 45.0% | |
ACGCTGACAGATAAATCCAC+AGG | - | chr3.3:26922304-26922323 | None:intergenic | 45.0% | |
AGATAGAGAGCCTTCTTGGA+AGG | - | chr3.3:26919632-26919651 | None:intergenic | 45.0% | |
AGGAAATGGAATGCCGAGAA+AGG | - | chr3.3:26921570-26921589 | None:intergenic | 45.0% | |
AGGGAGAAAGTGATTCCAGA+CGG | - | chr3.3:26919561-26919580 | None:intergenic | 45.0% | |
ATGATGACCGCAATTGGATC+TGG | + | chr3.3:26921434-26921453 | MS.gene96708:CDS | 45.0% | |
ATGGTGGTTCAACGGAACAT+CGG | - | chr3.3:26919923-26919942 | None:intergenic | 45.0% | |
CACTTTCATGCCAGAGTAAG+AGG | + | chr3.3:26922415-26922434 | MS.gene96708:CDS | 45.0% | |
CGACCTATCATCATCGACAA+TGG | + | chr3.3:26919665-26919684 | MS.gene96708:CDS | 45.0% | |
CTAATCTTCGTCTTGTGTGG+TGG | + | chr3.3:26922173-26922192 | MS.gene96708:CDS | 45.0% | |
CTATAGCTTACATCCAGTGG+TGG | + | chr3.3:26920287-26920306 | MS.gene96708:intron | 45.0% | |
CTGGCATGAAAGTGAAACCT+CGG | - | chr3.3:26922409-26922428 | None:intergenic | 45.0% | |
CTTCCTAGTGTGAGAAGTGA+TGG | + | chr3.3:26922445-26922464 | MS.gene96708:CDS | 45.0% | |
GACGAAGATTAGCAACTTCG+GGG | - | chr3.3:26922165-26922184 | None:intergenic | 45.0% | |
GAGGTTCAGATTCAGGTGTA+TGG | - | chr3.3:26921795-26921814 | None:intergenic | 45.0% | |
GATAAAGGCTGATGAGACCA+AGG | + | chr3.3:26922543-26922562 | MS.gene96708:CDS | 45.0% | |
GATGATAGGTCGACCAGATA+GGG | - | chr3.3:26919657-26919676 | None:intergenic | 45.0% | |
GCAAGATGAACGACAATGTG+AGG | + | chr3.3:26921660-26921679 | MS.gene96708:intron | 45.0% | |
GCTCTCTATCTTTCCCTATC+TGG | + | chr3.3:26919641-26919660 | MS.gene96708:CDS | 45.0% | |
GGAAAGATAGAGAGCCTTCT+TGG | - | chr3.3:26919636-26919655 | None:intergenic | 45.0% | |
GTCATCATCACCCCAAACAA+TGG | - | chr3.3:26921422-26921441 | None:intergenic | 45.0% | |
TAAGACCTTACGGTTATCCG+AGG | + | chr3.3:26922389-26922408 | MS.gene96708:CDS | 45.0% | |
TAGCAGTCCAGATCCAATTG+CGG | - | chr3.3:26921444-26921463 | None:intergenic | 45.0% | |
TCACTTCTCACACTAGGAAG+CGG | - | chr3.3:26922445-26922464 | None:intergenic | 45.0% | |
TGAAACCTCGGATAACCGTA+AGG | - | chr3.3:26922397-26922416 | None:intergenic | 45.0% | |
TGAGCATTCGTATGTAGCCA+GGG | - | chr3.3:26921252-26921271 | None:intergenic | 45.0% | |
TGATGATAGGTCGACCAGAT+AGG | - | chr3.3:26919658-26919677 | None:intergenic | 45.0% | |
TGTGGTGGCTTGAAATTCGT+GGG | + | chr3.3:26922188-26922207 | MS.gene96708:CDS | 45.0% | |
TGTGTGTGTGTGTGTTGTGT+CGG | + | chr3.3:26920116-26920135 | MS.gene96708:intron | 45.0% | |
TTACACGCAGATGGATGACT+TGG | + | chr3.3:26920990-26921009 | MS.gene96708:intron | 45.0% | |
TTCTCGGCATTCCATTTCCT+TGG | + | chr3.3:26921570-26921589 | MS.gene96708:intron | 45.0% | |
TTGAGCATTCGTATGTAGCC+AGG | - | chr3.3:26921253-26921272 | None:intergenic | 45.0% | |
! | CTGCAACTTTTGTGTTGGAC+AGG | + | chr3.3:26922137-26922156 | MS.gene96708:intron | 45.0% |
! | GATTTATCTGTCAGCGTCGA+AGG | + | chr3.3:26922307-26922326 | MS.gene96708:CDS | 45.0% |
AAAGTGATTCCAGACGGCGT+CGG | - | chr3.3:26919555-26919574 | None:intergenic | 50.0% | |
AAGACTTTCCTTTCTGCCGC+TGG | + | chr3.3:26919527-26919546 | MS.gene96708:CDS | 50.0% | |
AAGCGGCAATCCTCTTACTC+TGG | - | chr3.3:26922428-26922447 | None:intergenic | 50.0% | |
AGCGGCAGAAAGGAAAGTCT+TGG | - | chr3.3:26919528-26919547 | None:intergenic | 50.0% | |
AGTCGTACCTGACAGTATGG+CGG | - | chr3.3:26919474-26919493 | None:intergenic | 50.0% | |
ATGAGTAAATTTCGGGGGGG+GGG | - | chr3.3:26921495-26921514 | None:intergenic | 50.0% | |
CACCCATCACTTCTCACACT+AGG | - | chr3.3:26922451-26922470 | None:intergenic | 50.0% | |
CATACTGTCAGGTACGACTC+CGG | + | chr3.3:26919475-26919494 | MS.gene96708:CDS | 50.0% | |
GAGCATTCGTATGTAGCCAG+GGG | - | chr3.3:26921251-26921270 | None:intergenic | 50.0% | |
GCGGAGCTATCCACACTTAA+GGG | - | chr3.3:26921229-26921248 | None:intergenic | 50.0% | |
GGAAACGAGAGAGAGTCTGA+CGG | - | chr3.3:26919507-26919526 | None:intergenic | 50.0% | |
GGGTGGTTGGAGATTGAGAT+GGG | + | chr3.3:26922466-26922485 | MS.gene96708:CDS | 50.0% | |
GTGTGGTGGCTTGAAATTCG+TGG | + | chr3.3:26922187-26922206 | MS.gene96708:CDS | 50.0% | |
TGCAAACGCTCCTTCCAAGA+AGG | + | chr3.3:26919619-26919638 | MS.gene96708:CDS | 50.0% | |
TGGGTGGTTGGAGATTGAGA+TGG | + | chr3.3:26922465-26922484 | MS.gene96708:CDS | 50.0% | |
TGGGTTTGACAACCTTCCTG+TGG | + | chr3.3:26922285-26922304 | MS.gene96708:CDS | 50.0% | |
! | CTAGTGTGAGAAGTGATGGG+TGG | + | chr3.3:26922449-26922468 | MS.gene96708:CDS | 50.0% |
! | GCAGATGGATGACTTGGCAT+AGG | + | chr3.3:26920996-26921015 | MS.gene96708:intron | 50.0% |
! | TTATCTGTCAGCGTCGAAGG+TGG | + | chr3.3:26922310-26922329 | MS.gene96708:CDS | 50.0% |
!! | CTTGGAAGGAGCGTTTGCAA+GGG | - | chr3.3:26919618-26919637 | None:intergenic | 50.0% |
!! | TCTTGGAAGGAGCGTTTGCA+AGG | - | chr3.3:26919619-26919638 | None:intergenic | 50.0% |
!! | TGTGAGAAGTGATGGGTGGT+TGG | + | chr3.3:26922453-26922472 | MS.gene96708:CDS | 50.0% |
!! | TTACATCCAGTGGTGGATCC+AGG | + | chr3.3:26920294-26920313 | MS.gene96708:intron | 50.0% |
CAGGTGCACACCCTTAAGTG+TGG | + | chr3.3:26921216-26921235 | MS.gene96708:intron | 55.0% | |
CATTCGTATGTAGCCAGGGG+CGG | - | chr3.3:26921248-26921267 | None:intergenic | 55.0% | |
CGGAGTCGTACCTGACAGTA+TGG | - | chr3.3:26919477-26919496 | None:intergenic | 55.0% | |
CTGATGAGACCAAGGGCAAG+GGG | + | chr3.3:26922551-26922570 | MS.gene96708:CDS | 55.0% | |
GAGAGTCTGACGGCATCAAC+CGG | - | chr3.3:26919497-26919516 | None:intergenic | 55.0% | |
GCTGATGAGACCAAGGGCAA+GGG | + | chr3.3:26922550-26922569 | MS.gene96708:CDS | 55.0% | |
GGCGGAGCTATCCACACTTA+AGG | - | chr3.3:26921230-26921249 | None:intergenic | 55.0% | |
GGTATGGCCAACCTGGAATC+AGG | - | chr3.3:26921469-26921488 | None:intergenic | 55.0% | |
TGAGTAAATTTCGGGGGGGG+GGG | - | chr3.3:26921494-26921513 | None:intergenic | 55.0% | |
TGCGTTTCCGCCATACTGTC+AGG | + | chr3.3:26919464-26919483 | MS.gene96708:CDS | 55.0% | |
TGCTACGCCTGATTCCAGGT+TGG | + | chr3.3:26921459-26921478 | MS.gene96708:intron | 55.0% | |
! | ATAGTTTGCACCCCTGCTCC+AGG | - | chr3.3:26920321-26920340 | None:intergenic | 55.0% |
! | GGGGTGATGATGACCGCAAT+TGG | + | chr3.3:26921428-26921447 | MS.gene96708:CDS | 55.0% |
!! | GAAGGAGCGTTTGCAAGGGA+AGG | - | chr3.3:26919614-26919633 | None:intergenic | 55.0% |
AGTAAATTTCGGGGGGGGGG+GGG | - | chr3.3:26921492-26921511 | None:intergenic | 60.0% | |
GAGTAAATTTCGGGGGGGGG+GGG | - | chr3.3:26921493-26921512 | None:intergenic | 60.0% | |
GGACTGCTACGCCTGATTCC+AGG | + | chr3.3:26921455-26921474 | MS.gene96708:CDS | 60.0% | |
GGCTGATGAGACCAAGGGCA+AGG | + | chr3.3:26922549-26922568 | MS.gene96708:CDS | 60.0% | |
TGGATCCAGGACCTGGAGCA+GGG | + | chr3.3:26920307-26920326 | MS.gene96708:intron | 60.0% | |
! | TAAGGGTGTGCACCTGACCC+AGG | - | chr3.3:26921212-26921231 | None:intergenic | 60.0% |
AGTGTGGATAGCTCCGCCCC+TGG | + | chr3.3:26921232-26921251 | MS.gene96708:intron | 65.0% | |
CCAGGTCCTGGATCCACCAC+TGG | - | chr3.3:26920303-26920322 | None:intergenic | 65.0% | |
CGTCGGAACCAGCGGCAGAA+AGG | - | chr3.3:26919538-26919557 | None:intergenic | 65.0% | |
GGATCCAGGACCTGGAGCAG+GGG | + | chr3.3:26920308-26920327 | MS.gene96708:intron | 65.0% | |
GTAAATTTCGGGGGGGGGGG+GGG | - | chr3.3:26921491-26921510 | None:intergenic | 65.0% | |
GTGGATCCAGGACCTGGAGC+AGG | + | chr3.3:26920306-26920325 | MS.gene96708:intron | 65.0% | |
TAAATTTCGGGGGGGGGGGG+GGG | - | chr3.3:26921490-26921509 | None:intergenic | 65.0% | |
!! | CCAGTGGTGGATCCAGGACC+TGG | + | chr3.3:26920300-26920319 | MS.gene96708:intron | 65.0% |
TGCACCCCTGCTCCAGGTCC+TGG | - | chr3.3:26920315-26920334 | None:intergenic | 70.0% | |
! | CCAGACGGCGTCGGAACCAG+CGG | - | chr3.3:26919546-26919565 | None:intergenic | 70.0% |
! | GGGGGGGGGTATGGCCAACC+TGG | - | chr3.3:26921476-26921495 | None:intergenic | 75.0% |
!! | CCGCTGGTTCCGACGCCGTC+TGG | + | chr3.3:26919543-26919562 | MS.gene96708:CDS | 75.0% |
! | TTCGGGGGGGGGGGGGGGTA+TGG | - | chr3.3:26921485-26921504 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 26919434 | 26922612 | 26919434 | ID=MS.gene96708 |
chr3.3 | mRNA | 26919434 | 26922612 | 26919434 | ID=MS.gene96708.t1;Parent=MS.gene96708 |
chr3.3 | exon | 26919434 | 26919694 | 26919434 | ID=MS.gene96708.t1.exon1;Parent=MS.gene96708.t1 |
chr3.3 | CDS | 26919434 | 26919694 | 26919434 | ID=cds.MS.gene96708.t1;Parent=MS.gene96708.t1 |
chr3.3 | exon | 26921358 | 26921476 | 26921358 | ID=MS.gene96708.t1.exon2;Parent=MS.gene96708.t1 |
chr3.3 | CDS | 26921358 | 26921476 | 26921358 | ID=cds.MS.gene96708.t1;Parent=MS.gene96708.t1 |
chr3.3 | exon | 26922159 | 26922612 | 26922159 | ID=MS.gene96708.t1.exon3;Parent=MS.gene96708.t1 |
chr3.3 | CDS | 26922159 | 26922612 | 26922159 | ID=cds.MS.gene96708.t1;Parent=MS.gene96708.t1 |
Gene Sequence |
Protein sequence |