Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52530.t1 | XP_003590872.2 | 73.6 | 265 | 65 | 2 | 1 | 260 | 1 | 265 | 7.10E-103 | 383.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52530.t1 | Q949S5 | 45.5 | 257 | 131 | 7 | 7 | 259 | 4 | 255 | 4.5e-50 | 199.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52530.t1 | G7I5K2 | 73.6 | 265 | 65 | 2 | 1 | 260 | 1 | 265 | 5.1e-103 | 383.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52530.t1 | MTR_1g079180 | 73.585 | 265 | 65 | 2 | 1 | 260 | 1 | 265 | 8.77e-136 | 383 |
| MS.gene52530.t1 | MTR_1g079460 | 69.549 | 266 | 75 | 3 | 1 | 260 | 1 | 266 | 2.47e-122 | 349 |
| MS.gene52530.t1 | MTR_1g079230 | 66.667 | 273 | 78 | 2 | 1 | 260 | 1 | 273 | 4.33e-122 | 349 |
| MS.gene52530.t1 | MTR_1g079370 | 67.547 | 265 | 81 | 3 | 1 | 260 | 1 | 265 | 5.68e-119 | 341 |
| MS.gene52530.t1 | MTR_1g079200 | 68.302 | 265 | 78 | 4 | 1 | 260 | 1 | 264 | 7.46e-117 | 335 |
| MS.gene52530.t1 | MTR_1g079380 | 69.434 | 265 | 76 | 3 | 1 | 260 | 1 | 265 | 1.38e-114 | 331 |
| MS.gene52530.t1 | MTR_1g100597 | 63.768 | 276 | 80 | 4 | 1 | 260 | 1 | 272 | 1.30e-113 | 327 |
| MS.gene52530.t1 | MTR_1g079260 | 62.868 | 272 | 89 | 3 | 1 | 260 | 1 | 272 | 2.07e-109 | 317 |
| MS.gene52530.t1 | MTR_1g079850 | 60.854 | 281 | 89 | 5 | 1 | 260 | 1 | 281 | 3.12e-103 | 301 |
| MS.gene52530.t1 | MTR_1g079240 | 80.978 | 184 | 26 | 2 | 80 | 260 | 2 | 179 | 1.79e-101 | 293 |
| MS.gene52530.t1 | MTR_3g452600 | 60.000 | 260 | 99 | 3 | 4 | 260 | 10 | 267 | 7.31e-98 | 287 |
| MS.gene52530.t1 | MTR_1g026510 | 56.184 | 283 | 101 | 6 | 1 | 260 | 1 | 283 | 2.22e-96 | 285 |
| MS.gene52530.t1 | MTR_1g100613 | 62.656 | 241 | 76 | 2 | 20 | 246 | 5 | 245 | 4.65e-96 | 282 |
| MS.gene52530.t1 | MTR_3g006850 | 54.515 | 299 | 94 | 6 | 4 | 260 | 17 | 315 | 6.05e-91 | 271 |
| MS.gene52530.t1 | MTR_3g450990 | 54.839 | 279 | 99 | 5 | 4 | 260 | 10 | 283 | 8.80e-90 | 267 |
| MS.gene52530.t1 | MTR_1g079250 | 56.475 | 278 | 103 | 5 | 1 | 260 | 1 | 278 | 9.97e-90 | 268 |
| MS.gene52530.t1 | MTR_1g079340 | 53.497 | 286 | 107 | 6 | 1 | 260 | 40 | 325 | 2.20e-85 | 258 |
| MS.gene52530.t1 | MTR_1g079350 | 53.957 | 278 | 107 | 10 | 1 | 260 | 1 | 275 | 2.19e-81 | 246 |
| MS.gene52530.t1 | MTR_2g079100 | 55.385 | 260 | 101 | 5 | 5 | 257 | 10 | 261 | 2.77e-81 | 245 |
| MS.gene52530.t1 | MTR_1g079410 | 52.434 | 267 | 114 | 6 | 5 | 260 | 9 | 273 | 5.27e-78 | 237 |
| MS.gene52530.t1 | MTR_7g096300 | 55.932 | 236 | 99 | 2 | 1 | 234 | 1 | 233 | 1.61e-74 | 241 |
| MS.gene52530.t1 | MTR_1g078470 | 70.414 | 169 | 48 | 2 | 93 | 260 | 17 | 184 | 2.96e-74 | 224 |
| MS.gene52530.t1 | MTR_1g079140 | 42.525 | 301 | 122 | 7 | 4 | 260 | 13 | 306 | 1.24e-63 | 201 |
| MS.gene52530.t1 | MTR_1g079400 | 44.170 | 283 | 115 | 6 | 5 | 260 | 13 | 279 | 1.38e-63 | 201 |
| MS.gene52530.t1 | MTR_7g112550 | 43.273 | 275 | 134 | 8 | 7 | 260 | 10 | 283 | 1.56e-56 | 182 |
| MS.gene52530.t1 | MTR_1g083580 | 37.681 | 276 | 155 | 5 | 2 | 260 | 6 | 281 | 1.14e-54 | 177 |
| MS.gene52530.t1 | MTR_7g112560 | 40.304 | 263 | 145 | 8 | 4 | 260 | 1 | 257 | 7.16e-49 | 162 |
| MS.gene52530.t1 | MTR_1g078460 | 80.233 | 86 | 17 | 0 | 1 | 86 | 64 | 149 | 1.12e-41 | 140 |
| MS.gene52530.t1 | MTR_4g023570 | 37.879 | 264 | 130 | 8 | 4 | 260 | 1 | 237 | 7.45e-40 | 138 |
| MS.gene52530.t1 | MTR_1g079350 | 61.017 | 118 | 40 | 2 | 1 | 115 | 1 | 115 | 1.05e-39 | 137 |
| MS.gene52530.t1 | MTR_1g076870 | 59.200 | 125 | 33 | 1 | 128 | 234 | 2 | 126 | 3.34e-38 | 130 |
| MS.gene52530.t1 | MTR_7g096310 | 57.252 | 131 | 48 | 3 | 54 | 182 | 35 | 159 | 5.18e-36 | 126 |
| MS.gene52530.t1 | MTR_2g042540 | 61.905 | 105 | 38 | 2 | 1 | 103 | 1 | 105 | 2.41e-34 | 120 |
| MS.gene52530.t1 | MTR_1g079210 | 55.932 | 118 | 38 | 1 | 130 | 233 | 8 | 125 | 1.28e-33 | 119 |
| MS.gene52530.t1 | MTR_1g079220 | 80.303 | 66 | 13 | 0 | 165 | 230 | 1 | 66 | 7.18e-30 | 107 |
| MS.gene52530.t1 | MTR_1g079130 | 40.625 | 192 | 79 | 8 | 101 | 260 | 1 | 189 | 3.43e-26 | 101 |
| MS.gene52530.t1 | MTR_3g058640 | 53.000 | 100 | 47 | 0 | 128 | 227 | 7 | 106 | 5.65e-26 | 98.6 |
| MS.gene52530.t1 | MTR_7g103380 | 24.706 | 255 | 167 | 6 | 6 | 244 | 21 | 266 | 3.04e-20 | 88.2 |
| MS.gene52530.t1 | MTR_0002s0020 | 29.586 | 169 | 111 | 2 | 3 | 165 | 21 | 187 | 5.63e-19 | 84.3 |
| MS.gene52530.t1 | MTR_4g102770 | 35.915 | 142 | 83 | 4 | 6 | 142 | 21 | 159 | 1.68e-16 | 77.4 |
| MS.gene52530.t1 | MTR_0113s0040 | 33.793 | 145 | 89 | 4 | 2 | 142 | 20 | 161 | 2.52e-16 | 77.0 |
| MS.gene52530.t1 | MTR_5g010800 | 33.333 | 141 | 87 | 4 | 6 | 142 | 19 | 156 | 3.53e-15 | 73.9 |
| MS.gene52530.t1 | MTR_1g101390 | 33.793 | 145 | 89 | 4 | 2 | 142 | 26 | 167 | 4.16e-15 | 73.6 |
| MS.gene52530.t1 | MTR_4g083970 | 27.807 | 187 | 111 | 5 | 80 | 260 | 122 | 290 | 2.46e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52530.t1 | AT1G80110 | 45.946 | 259 | 127 | 8 | 7 | 259 | 4 | 255 | 1.78e-62 | 197 |
| MS.gene52530.t1 | AT2G02360 | 40.840 | 262 | 142 | 5 | 4 | 259 | 14 | 268 | 2.44e-60 | 192 |
| MS.gene52530.t1 | AT2G02250 | 38.846 | 260 | 152 | 4 | 4 | 259 | 47 | 303 | 1.50e-56 | 183 |
| MS.gene52530.t1 | AT2G02240 | 39.382 | 259 | 151 | 3 | 4 | 259 | 61 | 316 | 2.30e-54 | 178 |
| MS.gene52530.t1 | AT2G02350 | 38.023 | 263 | 152 | 6 | 4 | 259 | 24 | 282 | 8.61e-53 | 173 |
| MS.gene52530.t1 | AT2G02340 | 38.745 | 271 | 152 | 7 | 1 | 259 | 33 | 301 | 1.73e-52 | 173 |
| MS.gene52530.t1 | AT2G02230 | 34.405 | 311 | 145 | 8 | 2 | 260 | 30 | 333 | 7.46e-48 | 162 |
| MS.gene52530.t1 | AT1G09155 | 39.785 | 279 | 142 | 9 | 7 | 260 | 3 | 280 | 1.20e-45 | 155 |
| MS.gene52530.t1 | AT2G02320 | 37.121 | 264 | 149 | 8 | 6 | 259 | 42 | 298 | 4.22e-45 | 154 |
| MS.gene52530.t1 | AT1G56240 | 38.489 | 278 | 145 | 8 | 7 | 259 | 4 | 280 | 7.40e-45 | 152 |
| MS.gene52530.t1 | AT1G56250 | 39.068 | 279 | 144 | 8 | 7 | 260 | 4 | 281 | 7.88e-43 | 147 |
| MS.gene52530.t1 | AT2G02300 | 37.313 | 268 | 137 | 9 | 4 | 260 | 34 | 281 | 3.82e-42 | 145 |
| MS.gene52530.t1 | AT2G02310 | 32.197 | 264 | 168 | 4 | 4 | 260 | 45 | 304 | 1.27e-39 | 139 |
| MS.gene52530.t1 | AT5G24560 | 44.286 | 140 | 75 | 1 | 4 | 143 | 3 | 139 | 2.26e-32 | 117 |
| MS.gene52530.t1 | AT2G02350 | 34.940 | 166 | 100 | 5 | 101 | 259 | 1 | 165 | 2.78e-23 | 93.6 |
| MS.gene52530.t1 | AT3G53000 | 27.407 | 270 | 172 | 9 | 6 | 259 | 23 | 284 | 5.71e-22 | 92.8 |
| MS.gene52530.t1 | AT3G61060 | 31.250 | 144 | 92 | 4 | 3 | 142 | 24 | 164 | 1.50e-17 | 80.5 |
| MS.gene52530.t1 | AT1G63090 | 30.918 | 207 | 116 | 9 | 6 | 192 | 28 | 227 | 2.70e-17 | 79.7 |
| MS.gene52530.t1 | AT3G61060 | 29.861 | 144 | 95 | 3 | 3 | 142 | 24 | 165 | 1.19e-16 | 78.2 |
| MS.gene52530.t1 | AT1G12710 | 35.211 | 142 | 82 | 5 | 6 | 142 | 30 | 166 | 1.64e-16 | 77.8 |
| MS.gene52530.t1 | AT1G12710 | 34.884 | 129 | 74 | 5 | 6 | 129 | 30 | 153 | 5.47e-12 | 65.1 |
| MS.gene52530.t1 | AT5G52120 | 31.034 | 145 | 91 | 3 | 4 | 140 | 21 | 164 | 9.87e-12 | 64.3 |
Find 60 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCCGCATACTGAGTATT+TGG | 0.291931 | 1.3:+56291899 | None:intergenic |
| ATTGGAGAGTTCTTCAATTC+AGG | 0.297485 | 1.3:-56291686 | MS.gene52530:CDS |
| GGATTCATGTGCCTGATTCT+AGG | 0.312874 | 1.3:-56293330 | MS.gene52530:intron |
| TCATCAGGACTACATCTTCT+AGG | 0.339890 | 1.3:+56291663 | None:intergenic |
| ATGTTAAGCAGACAGATTAT+TGG | 0.341622 | 1.3:-56291640 | MS.gene52530:CDS |
| GAGAATTTGCCAACATCAAT+TGG | 0.342979 | 1.3:+56294686 | None:intergenic |
| TGCCAACATTCCAACCAAAA+AGG | 0.353415 | 1.3:-56294561 | MS.gene52530:CDS |
| TGAAATGCAGAGCTTTCAAT+TGG | 0.399907 | 1.3:-56293437 | MS.gene52530:intron |
| CCACCTTACTGGTCTTACTT+AGG | 0.410663 | 1.3:+56291581 | None:intergenic |
| TCTGCTAGATCTCTCTCCAT+TGG | 0.425066 | 1.3:-56293382 | MS.gene52530:CDS |
| AAGAAAGATCTCTTGCTTGA+AGG | 0.426683 | 1.3:-56291617 | MS.gene52530:CDS |
| CCGTCGATTCTGATGATGTC+TGG | 0.429789 | 1.3:-56294637 | MS.gene52530:CDS |
| TGACCATGATCGATGATGAT+AGG | 0.436502 | 1.3:+56294512 | None:intergenic |
| TTAAGAGCTAACCTAGAATC+AGG | 0.440201 | 1.3:+56293319 | None:intergenic |
| TGCTTGAAGGAATAGAAGTT+AGG | 0.447787 | 1.3:-56291604 | MS.gene52530:CDS |
| CTTCGTTATGTGTGGTGGCT+TGG | 0.448447 | 1.3:-56291956 | MS.gene52530:CDS |
| GGGTGGTTGGAGATTGAGAT+TGG | 0.460797 | 1.3:-56291704 | MS.gene52530:CDS |
| AGGCTGCACAACAGAGTAGC+AGG | 0.471333 | 1.3:-56291755 | MS.gene52530:CDS |
| CTGTCTGCTTAACATTCATC+AGG | 0.473973 | 1.3:+56291648 | None:intergenic |
| TATGATGGCAATACACCCTT+CGG | 0.476538 | 1.3:+56294724 | None:intergenic |
| TCCATTGGTTGTGGTGATGA+TGG | 0.478243 | 1.3:-56293367 | MS.gene52530:CDS |
| GAAGGAGATTGTGAGAGGAT+AGG | 0.482706 | 1.3:+56294587 | None:intergenic |
| CATCATCGATCATGGTCAAA+TGG | 0.482718 | 1.3:-56294507 | MS.gene52530:intron |
| ATGATGGCAATACACCCTTC+GGG | 0.493299 | 1.3:+56294725 | None:intergenic |
| CGTCCTATCATCATCGATCA+TGG | 0.502262 | 1.3:-56294515 | MS.gene52530:CDS |
| CGGACAGTTCTGAAATCCTT+CGG | 0.508978 | 1.3:+56291853 | None:intergenic |
| CGCACGACTCCAATTGATGT+TGG | 0.511806 | 1.3:-56294695 | MS.gene52530:CDS |
| AGATCTCTCTCCATTGGTTG+TGG | 0.516660 | 1.3:-56293376 | MS.gene52530:CDS |
| CTTGTCTTCGTTATGTGTGG+TGG | 0.533261 | 1.3:-56291961 | MS.gene52530:CDS |
| ATGATGGTCGATCTTGCAGC+TGG | 0.533871 | 1.3:-56293351 | MS.gene52530:CDS |
| AGGATAGGTGAGATATCAAG+AGG | 0.534852 | 1.3:+56294602 | None:intergenic |
| ACCATCATCACCACAACCAA+TGG | 0.538567 | 1.3:+56293366 | None:intergenic |
| TGTCCTAGTGTGAGAAGTGA+TGG | 0.545532 | 1.3:-56291725 | MS.gene52530:CDS |
| TGTGGTGGCTTGGTATTCGT+TGG | 0.548471 | 1.3:-56291946 | MS.gene52530:CDS |
| TGTGAGAAGTGATGGGTGGT+TGG | 0.556049 | 1.3:-56291717 | MS.gene52530:CDS |
| GGTTTGAAGAATTGCCCGAA+GGG | 0.556861 | 1.3:-56294739 | MS.gene52530:CDS |
| TTTCAATTGGATAGAAAGAG+TGG | 0.567809 | 1.3:-56293424 | MS.gene52530:CDS |
| CACCCATCACTTCTCACACT+AGG | 0.570746 | 1.3:+56291722 | None:intergenic |
| TGTCTGTTATTATCGAAATG+TGG | 0.571172 | 1.3:-56291783 | MS.gene52530:CDS |
| ATTATCGAAATGTGGAAGGT+AGG | 0.571537 | 1.3:-56291775 | MS.gene52530:CDS |
| AGGATTTCAGAACTGTCCGC+TGG | 0.572689 | 1.3:-56291849 | MS.gene52530:CDS |
| GTTGGAATGTTGGCAAGTGA+AGG | 0.589402 | 1.3:+56294569 | None:intergenic |
| TTGCTTGTCTTCGTTATGTG+TGG | 0.599556 | 1.3:-56291964 | MS.gene52530:CDS |
| TGTCCGCTGGAGTTATCAGT+TGG | 0.602908 | 1.3:-56291836 | MS.gene52530:CDS |
| CTGGAGTTATCAGTTGGTGT+CGG | 0.607526 | 1.3:-56291830 | MS.gene52530:CDS |
| CCAGACATCATCAGAATCGA+CGG | 0.609248 | 1.3:+56294637 | None:intergenic |
| CAAGTGAAGGAGATTGTGAG+AGG | 0.609554 | 1.3:+56294582 | None:intergenic |
| GTCTCCAAATACTCAGTATG+CGG | 0.620795 | 1.3:-56291903 | MS.gene52530:CDS |
| GAGTTATCAGTTGGTGTCGG+AGG | 0.629641 | 1.3:-56291827 | MS.gene52530:CDS |
| TGTTATTATCGAAATGTGGA+AGG | 0.631974 | 1.3:-56291779 | MS.gene52530:CDS |
| GAGTATTTGGAGACAAGGCA+AGG | 0.643849 | 1.3:+56291912 | None:intergenic |
| ATACTGAGTATTTGGAGACA+AGG | 0.649595 | 1.3:+56291907 | None:intergenic |
| TTCAAGATGATTGATGCCGA+AGG | 0.650359 | 1.3:-56291869 | MS.gene52530:CDS |
| AGGTTTGAAGAATTGCCCGA+AGG | 0.653134 | 1.3:-56294740 | MS.gene52530:CDS |
| TGTGTTGGACAGGTTTCACG+AGG | 0.664661 | 1.3:-56291987 | MS.gene52530:intron |
| AGTCGTGCGAGAGAGTATGA+TGG | 0.677246 | 1.3:+56294709 | None:intergenic |
| GTCCTAGTGTGAGAAGTGAT+GGG | 0.683787 | 1.3:-56291724 | MS.gene52530:CDS |
| CTAGTGTGAGAAGTGATGGG+TGG | 0.699298 | 1.3:-56291721 | MS.gene52530:CDS |
| ACACCAACTGATAACTCCAG+CGG | 0.724786 | 1.3:+56291833 | None:intergenic |
| GTAAACATCAAAGAATGACA+AGG | 0.740995 | 1.3:-56294760 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTTTAATAAAAAACTTA+AGG | - | chr1.3:56292596-56292615 | MS.gene52530:intron | 10.0% |
| !!! | AATATATTGTAATTTTTGAA+AGG | - | chr1.3:56292672-56292691 | MS.gene52530:intron | 10.0% |
| !!! | ATATATTGTAATTTTTGAAA+GGG | - | chr1.3:56292673-56292692 | MS.gene52530:intron | 10.0% |
| !!! | TAAGTTTTTTATTAAACTAA+CGG | + | chr1.3:56292596-56292615 | None:intergenic | 10.0% |
| !! | CTTACTTAAAATTAAGTTAA+GGG | + | chr1.3:56291984-56292003 | None:intergenic | 15.0% |
| !! | TAAAGCCTATTTAATTAAAT+AGG | + | chr1.3:56293545-56293564 | None:intergenic | 15.0% |
| !! | TAAATAATGATATCTTATGA+AGG | - | chr1.3:56293353-56293372 | MS.gene52530:CDS | 15.0% |
| !! | TCTTACTTAAAATTAAGTTA+AGG | + | chr1.3:56291985-56292004 | None:intergenic | 15.0% |
| !! | TGAAATAATTTAGTTATCAT+TGG | - | chr1.3:56294196-56294215 | MS.gene52530:intron | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | - | chr1.3:56292138-56292157 | MS.gene52530:intron | 15.0% |
| !!! | TTAAATTGATGATGATATAT+TGG | + | chr1.3:56293698-56293717 | None:intergenic | 15.0% |
| !! | AAATAGACTAAAATTTACGA+AGG | - | chr1.3:56293303-56293322 | MS.gene52530:intron | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | chr1.3:56292382-56292401 | MS.gene52530:intron | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | - | chr1.3:56292380-56292399 | MS.gene52530:intron | 20.0% |
| !! | ATTAACTTAATGATAAGTAG+GGG | - | chr1.3:56293076-56293095 | MS.gene52530:intron | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | - | chr1.3:56292381-56292400 | MS.gene52530:intron | 20.0% |
| !! | CATTAACTTAATGATAAGTA+GGG | - | chr1.3:56293075-56293094 | MS.gene52530:intron | 20.0% |
| !! | TATACATAAAAAGCTTAACA+GGG | - | chr1.3:56293475-56293494 | MS.gene52530:intron | 20.0% |
| !! | TCATTAACTTAATGATAAGT+AGG | - | chr1.3:56293074-56293093 | MS.gene52530:intron | 20.0% |
| !! | TTATACATAAAAAGCTTAAC+AGG | - | chr1.3:56293474-56293493 | MS.gene52530:intron | 20.0% |
| !! | TTATTTAGTAGCACATATAT+TGG | + | chr1.3:56293389-56293408 | None:intergenic | 20.0% |
| !! | TTGGTTATTACTTATCATTA+GGG | + | chr1.3:56293671-56293690 | None:intergenic | 20.0% |
| !! | TTTAACACATATACAAACAA+AGG | + | chr1.3:56292339-56292358 | None:intergenic | 20.0% |
| !!! | AAGAAACAATTTCTACTTTT+GGG | + | chr1.3:56292737-56292756 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCTATTTAGTAGT+AGG | + | chr1.3:56293297-56293316 | None:intergenic | 20.0% |
| !!! | CAATTCATGTATTCTTATTT+CGG | - | chr1.3:56294323-56294342 | MS.gene52530:intron | 20.0% |
| !!! | CTTAATTTTAAGTAAGAGTT+TGG | - | chr1.3:56291988-56292007 | MS.gene52530:intron | 20.0% |
| !!! | TAAGAAACAATTTCTACTTT+TGG | + | chr1.3:56292738-56292757 | None:intergenic | 20.0% |
| !!! | TGTAAAATAGGCTTTTAAAT+AGG | + | chr1.3:56293250-56293269 | None:intergenic | 20.0% |
| !!! | TTATTTCAATTTTGTCCTTT+TGG | - | chr1.3:56292025-56292044 | MS.gene52530:intron | 20.0% |
| ! | AAATGTGAAAAATGCAAAAG+GGG | + | chr1.3:56292261-56292280 | None:intergenic | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+AGG | + | chr1.3:56292263-56292282 | None:intergenic | 25.0% |
| ! | ATGACAGTGAGAAATAAAAT+CGG | + | chr1.3:56293760-56293779 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr1.3:56292428-56292447 | MS.gene52530:intron | 25.0% |
| ! | CAAATGAGTGTTTAGATATA+GGG | - | chr1.3:56292479-56292498 | MS.gene52530:intron | 25.0% |
| ! | CATATGCAAACATATACAAA+TGG | + | chr1.3:56292052-56292071 | None:intergenic | 25.0% |
| ! | CTAAATAACCAATCATATGA+AGG | - | chr1.3:56293401-56293420 | MS.gene52530:CDS | 25.0% |
| ! | CTCAGATATATTCAAGTAAA+TGG | + | chr1.3:56293873-56293892 | None:intergenic | 25.0% |
| ! | GAAATGTGAAAAATGCAAAA+GGG | + | chr1.3:56292262-56292281 | None:intergenic | 25.0% |
| ! | GTTGGTTATTACTTATCATT+AGG | + | chr1.3:56293672-56293691 | None:intergenic | 25.0% |
| ! | TATGTAGCTGTAGAAAATAT+TGG | + | chr1.3:56292628-56292647 | None:intergenic | 25.0% |
| ! | TCAAATGAGTGTTTAGATAT+AGG | - | chr1.3:56292478-56292497 | MS.gene52530:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr1.3:56292429-56292448 | MS.gene52530:intron | 25.0% |
| ! | TGGTTATTACTTATCATTAG+GGG | + | chr1.3:56293670-56293689 | None:intergenic | 25.0% |
| !!! | AGACAATTTTAGTACTACTA+TGG | + | chr1.3:56294543-56294562 | None:intergenic | 25.0% |
| !!! | ATAGTTGATAGTTTACATGA+TGG | + | chr1.3:56293920-56293939 | None:intergenic | 25.0% |
| !!! | ATTGATGATGATATATTGGT+TGG | + | chr1.3:56293694-56293713 | None:intergenic | 25.0% |
| ACATATACAAATGGACCAAA+AGG | + | chr1.3:56292043-56292062 | None:intergenic | 30.0% | |
| AGAATGCTAATAGTAAGCTT+TGG | - | chr1.3:56292875-56292894 | MS.gene52530:intron | 30.0% | |
| ATGTTAAGCAGACAGATTAT+TGG | - | chr1.3:56294701-56294720 | MS.gene52530:CDS | 30.0% | |
| CAAATTTGAACTTCAATTGC+AGG | - | chr1.3:56294087-56294106 | MS.gene52530:intron | 30.0% | |
| CAGACATATTCATGTACTTT+AGG | + | chr1.3:56293329-56293348 | None:intergenic | 30.0% | |
| CAGATCGAAAAATCTTAGAA+AGG | + | chr1.3:56291684-56291703 | None:intergenic | 30.0% | |
| CCTATTTAATTAAATAGGCC+AGG | + | chr1.3:56293540-56293559 | None:intergenic | 30.0% | |
| CCTGGCCTATTTAATTAAAT+AGG | - | chr1.3:56293537-56293556 | MS.gene52530:intron | 30.0% | |
| CTGCAATTGAAGTTCAAATT+TGG | + | chr1.3:56294089-56294108 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr1.3:56292430-56292449 | MS.gene52530:intron | 30.0% | |
| GCTAGACTTTAGTGTAAAAT+AGG | + | chr1.3:56293262-56293281 | None:intergenic | 30.0% | |
| TATACAAACAAAGGACAGTT+TGG | + | chr1.3:56292330-56292349 | None:intergenic | 30.0% | |
| TATTACTTATCATTAGGGGT+GGG | + | chr1.3:56293666-56293685 | None:intergenic | 30.0% | |
| TCGAAAAATCTTAGAAAGGA+TGG | + | chr1.3:56291680-56291699 | None:intergenic | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr1.3:56292443-56292462 | MS.gene52530:intron | 30.0% | |
| TGGCCTACTTCAAAAATTAT+AGG | - | chr1.3:56293142-56293161 | MS.gene52530:intron | 30.0% | |
| TGTCTGTTATTATCGAAATG+TGG | - | chr1.3:56294558-56294577 | MS.gene52530:CDS | 30.0% | |
| TGTTATTATCGAAATGTGGA+AGG | - | chr1.3:56294562-56294581 | MS.gene52530:CDS | 30.0% | |
| TTATTACTTATCATTAGGGG+TGG | + | chr1.3:56293667-56293686 | None:intergenic | 30.0% | |
| TTCATTTGGAAGAAAAAACG+AGG | + | chr1.3:56294024-56294043 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr1.3:56292442-56292461 | MS.gene52530:intron | 30.0% | |
| TTGGCTGTATTGTTAACTTT+GGG | + | chr1.3:56294070-56294089 | None:intergenic | 30.0% | |
| TTTCAATTGGATAGAAAGAG+TGG | - | chr1.3:56292917-56292936 | MS.gene52530:intron | 30.0% | |
| TTTGGCTGTATTGTTAACTT+TGG | + | chr1.3:56294071-56294090 | None:intergenic | 30.0% | |
| ! | ATGATGATATATTGGTTGGT+TGG | + | chr1.3:56293690-56293709 | None:intergenic | 30.0% |
| ! | ATTTCGGTAACTTTTTGTGT+TGG | - | chr1.3:56294339-56294358 | MS.gene52530:intron | 30.0% |
| ! | TCACAAATGGAGTATTTAGA+CGG | + | chr1.3:56294275-56294294 | None:intergenic | 30.0% |
| !! | CATCGATTTCTCAACTATTA+GGG | - | chr1.3:56291874-56291893 | MS.gene52530:CDS | 30.0% |
| !! | TCATCGATTTCTCAACTATT+AGG | - | chr1.3:56291873-56291892 | MS.gene52530:CDS | 30.0% |
| !! | TCTAACAAGAAGTGTTCATT+TGG | + | chr1.3:56294038-56294057 | None:intergenic | 30.0% |
| !!! | AGGCCTATAATTTTTGAAGT+AGG | + | chr1.3:56293148-56293167 | None:intergenic | 30.0% |
| !!! | TATAATTTTTGAAGTAGGCC+AGG | + | chr1.3:56293143-56293162 | None:intergenic | 30.0% |
| AAAAAGCCTATTAAGTCCGT+CGG | + | chr1.3:56293505-56293524 | None:intergenic | 35.0% | |
| AACTTAATGATAAGTAGGGG+TGG | - | chr1.3:56293079-56293098 | MS.gene52530:intron | 35.0% | |
| AAGAAAGATCTCTTGCTTGA+AGG | - | chr1.3:56294724-56294743 | MS.gene52530:CDS | 35.0% | |
| AATGAACAATTTGCCAGGAA+AGG | + | chr1.3:56293850-56293869 | None:intergenic | 35.0% | |
| AATGGAATGAACAATTTGCC+AGG | + | chr1.3:56293855-56293874 | None:intergenic | 35.0% | |
| ACATAAAAAGCTTAACAGGG+CGG | - | chr1.3:56293478-56293497 | MS.gene52530:intron | 35.0% | |
| ACCTTGTTAATAAACGAGCT+GGG | - | chr1.3:56293582-56293601 | MS.gene52530:intron | 35.0% | |
| AGCTCGTTTATTAACAAGGT+CGG | + | chr1.3:56293582-56293601 | None:intergenic | 35.0% | |
| ATACTGAGTATTTGGAGACA+AGG | + | chr1.3:56294437-56294456 | None:intergenic | 35.0% | |
| ATTATCGAAATGTGGAAGGT+AGG | - | chr1.3:56294566-56294585 | MS.gene52530:CDS | 35.0% | |
| ATTGGAGAGTTCTTCAATTC+AGG | - | chr1.3:56294655-56294674 | MS.gene52530:CDS | 35.0% | |
| CTTTATTCTTTCTCCTTTCC+TGG | - | chr1.3:56293834-56293853 | MS.gene52530:intron | 35.0% | |
| GAGAATTTGCCAACATCAAT+TGG | + | chr1.3:56291658-56291677 | None:intergenic | 35.0% | |
| GAGATTCATAACGTCACAAA+TGG | + | chr1.3:56294288-56294307 | None:intergenic | 35.0% | |
| GTTAAAACATACAAGCGAGA+AGG | + | chr1.3:56293815-56293834 | None:intergenic | 35.0% | |
| TAATTAAATAGGCCAGGCTA+AGG | + | chr1.3:56293534-56293553 | None:intergenic | 35.0% | |
| TGAAATGCAGAGCTTTCAAT+TGG | - | chr1.3:56292904-56292923 | MS.gene52530:intron | 35.0% | |
| TGAGTGTTTAGATATAGGGT+CGG | - | chr1.3:56292483-56292502 | MS.gene52530:intron | 35.0% | |
| TGCTTGAAGGAATAGAAGTT+AGG | - | chr1.3:56294737-56294756 | MS.gene52530:CDS | 35.0% | |
| TTAAGAGCTAACCTAGAATC+AGG | + | chr1.3:56293025-56293044 | None:intergenic | 35.0% | |
| TTGAACTTCAATTGCAGGAA+TGG | - | chr1.3:56294092-56294111 | MS.gene52530:intron | 35.0% | |
| ! | AGGCTTTTAAATAGGCTTTC+AGG | + | chr1.3:56293242-56293261 | None:intergenic | 35.0% |
| ! | AGTTAAGGGACTAAAAGTGT+AGG | + | chr1.3:56291970-56291989 | None:intergenic | 35.0% |
| ! | ATTAATTAGGGGCACGTTTA+GGG | - | chr1.3:56292393-56292412 | MS.gene52530:intron | 35.0% |
| ! | CACAAATGGAGTATTTAGAC+GGG | + | chr1.3:56294274-56294293 | None:intergenic | 35.0% |
| ! | GTTAAGGGACTAAAAGTGTA+GGG | + | chr1.3:56291969-56291988 | None:intergenic | 35.0% |
| ! | GTTTACATGATGGAGAGAAT+AGG | + | chr1.3:56293910-56293929 | None:intergenic | 35.0% |
| ! | TATTAATTAGGGGCACGTTT+AGG | - | chr1.3:56292392-56292411 | MS.gene52530:intron | 35.0% |
| !! | CATGTTAACTTGTGCCTTTA+GGG | - | chr1.3:56292697-56292716 | MS.gene52530:intron | 35.0% |
| !! | TCATGTTAACTTGTGCCTTT+AGG | - | chr1.3:56292696-56292715 | MS.gene52530:intron | 35.0% |
| AAAAATTATAGGCCTGAGCC+TGG | - | chr1.3:56293153-56293172 | MS.gene52530:intron | 40.0% | |
| AAAAGCCTATTAAGTCCGTC+GGG | + | chr1.3:56293504-56293523 | None:intergenic | 40.0% | |
| AACGCAAGCCTTCATATGAT+TGG | + | chr1.3:56293412-56293431 | None:intergenic | 40.0% | |
| AACTAAGCATTTCAACCTCG+AGG | + | chr1.3:56292854-56292873 | None:intergenic | 40.0% | |
| AACTTCAATTGCAGGAATGG+TGG | - | chr1.3:56294095-56294114 | MS.gene52530:intron | 40.0% | |
| AATAGGCTTTCAGGCTTCAT+CGG | + | chr1.3:56293233-56293252 | None:intergenic | 40.0% | |
| AGGATAGGTGAGATATCAAG+AGG | + | chr1.3:56291742-56291761 | None:intergenic | 40.0% | |
| ATCGGACCTTTAAATAGGTC+AGG | + | chr1.3:56293215-56293234 | None:intergenic | 40.0% | |
| CATCATCGATCATGGTCAAA+TGG | - | chr1.3:56291834-56291853 | MS.gene52530:CDS | 40.0% | |
| CTCTAGCAGCAAAGTTTCTT+CGG | + | chr1.3:56292551-56292570 | None:intergenic | 40.0% | |
| CTGTCTGCTTAACATTCATC+AGG | + | chr1.3:56294696-56294715 | None:intergenic | 40.0% | |
| CTTTAAATAGGCTAGGCCAT+AGG | - | chr1.3:56293615-56293634 | MS.gene52530:intron | 40.0% | |
| GACCTTGTTAATAAACGAGC+TGG | - | chr1.3:56293581-56293600 | MS.gene52530:intron | 40.0% | |
| GCAAAAGGGGCTTAGATATA+GGG | + | chr1.3:56292248-56292267 | None:intergenic | 40.0% | |
| GCTCGTTTATTAACAAGGTC+GGG | + | chr1.3:56293581-56293600 | None:intergenic | 40.0% | |
| GCTTCATCGGACCTTTAAAT+AGG | + | chr1.3:56293220-56293239 | None:intergenic | 40.0% | |
| GTCTCCAAATACTCAGTATG+CGG | - | chr1.3:56294438-56294457 | MS.gene52530:intron | 40.0% | |
| TAAGCCGCATACTGAGTATT+TGG | + | chr1.3:56294445-56294464 | None:intergenic | 40.0% | |
| TATGATGGCAATACACCCTT+CGG | + | chr1.3:56291620-56291639 | None:intergenic | 40.0% | |
| TCATCAGGACTACATCTTCT+AGG | + | chr1.3:56294681-56294700 | None:intergenic | 40.0% | |
| TGACCATGATCGATGATGAT+AGG | + | chr1.3:56291832-56291851 | None:intergenic | 40.0% | |
| TGATAAGTAGGGGTGGAAAT+AGG | - | chr1.3:56293086-56293105 | MS.gene52530:intron | 40.0% | |
| TGCAAAAGGGGCTTAGATAT+AGG | + | chr1.3:56292249-56292268 | None:intergenic | 40.0% | |
| TGCCAACATTCCAACCAAAA+AGG | - | chr1.3:56291780-56291799 | MS.gene52530:CDS | 40.0% | |
| TTCAAGATGATTGATGCCGA+AGG | - | chr1.3:56294472-56294491 | MS.gene52530:intron | 40.0% | |
| TTGCTTAACATGTGCCCTAA+AGG | + | chr1.3:56292714-56292733 | None:intergenic | 40.0% | |
| TTGCTTGTCTTCGTTATGTG+TGG | - | chr1.3:56294377-56294396 | MS.gene52530:intron | 40.0% | |
| ! | AGCCTATTTAAAGCCTAGCT+CGG | + | chr1.3:56293608-56293627 | None:intergenic | 40.0% |
| ! | GGTAACTTTTTGTGTTGGAC+AGG | - | chr1.3:56294344-56294363 | MS.gene52530:intron | 40.0% |
| !! | AGATAGAGAGCCTTTTTGGT+TGG | + | chr1.3:56291793-56291812 | None:intergenic | 40.0% |
| !! | AGCTAGGCTTTAAATAGGCT+AGG | - | chr1.3:56293608-56293627 | MS.gene52530:intron | 40.0% |
| !!! | AGCCTTTTTGGTTGGAATGT+TGG | + | chr1.3:56291785-56291804 | None:intergenic | 40.0% |
| !!! | CTTTTTTGTAAGCCTTAGCC+TGG | - | chr1.3:56293519-56293538 | MS.gene52530:intron | 40.0% |
| AAGGGGCTTAGATATAGGGA+CGG | + | chr1.3:56292244-56292263 | None:intergenic | 45.0% | |
| ACAAGCGAGAAGGTGAAGAA+AGG | + | chr1.3:56293805-56293824 | None:intergenic | 45.0% | |
| ACACCAACTGATAACTCCAG+CGG | + | chr1.3:56294511-56294530 | None:intergenic | 45.0% | |
| ACCATCATCACCACAACCAA+TGG | + | chr1.3:56292978-56292997 | None:intergenic | 45.0% | |
| ACCTTTAAATAGGTCAGGCC+AGG | + | chr1.3:56293210-56293229 | None:intergenic | 45.0% | |
| AGGTTTGAAGAATTGCCCGA+AGG | - | chr1.3:56291601-56291620 | MS.gene52530:CDS | 45.0% | |
| ATGATGGCAATACACCCTTC+GGG | + | chr1.3:56291619-56291638 | None:intergenic | 45.0% | |
| CAAGTGAAGGAGATTGTGAG+AGG | + | chr1.3:56291762-56291781 | None:intergenic | 45.0% | |
| CCAGACATCATCAGAATCGA+CGG | + | chr1.3:56291707-56291726 | None:intergenic | 45.0% | |
| CCTCGAAAATGAGCCTATGA+CGG | + | chr1.3:56293187-56293206 | None:intergenic | 45.0% | |
| CGTCCTATCATCATCGATCA+TGG | - | chr1.3:56291826-56291845 | MS.gene52530:CDS | 45.0% | |
| CTCGAAAATGAGCCTATGAC+GGG | + | chr1.3:56293186-56293205 | None:intergenic | 45.0% | |
| CTTGTCTTCGTTATGTGTGG+TGG | - | chr1.3:56294380-56294399 | MS.gene52530:intron | 45.0% | |
| GAAGGAGATTGTGAGAGGAT+AGG | + | chr1.3:56291757-56291776 | None:intergenic | 45.0% | |
| GAGTATTTGGAGACAAGGCA+AGG | + | chr1.3:56294432-56294451 | None:intergenic | 45.0% | |
| GCCCAGCTCGTTTATTAACA+AGG | + | chr1.3:56293586-56293605 | None:intergenic | 45.0% | |
| GGATTCATGTGCCTGATTCT+AGG | - | chr1.3:56293011-56293030 | MS.gene52530:intron | 45.0% | |
| GGTTTGAAGAATTGCCCGAA+GGG | - | chr1.3:56291602-56291621 | MS.gene52530:CDS | 45.0% | |
| GTCCTAGTGTGAGAAGTGAT+GGG | - | chr1.3:56294617-56294636 | MS.gene52530:CDS | 45.0% | |
| GTGTTTAGATATAGGGTCGG+AGG | - | chr1.3:56292486-56292505 | MS.gene52530:intron | 45.0% | |
| GTTGGAATGTTGGCAAGTGA+AGG | + | chr1.3:56291775-56291794 | None:intergenic | 45.0% | |
| TCTGCTAGATCTCTCTCCAT+TGG | - | chr1.3:56292959-56292978 | MS.gene52530:intron | 45.0% | |
| TGTCCTAGTGTGAGAAGTGA+TGG | - | chr1.3:56294616-56294635 | MS.gene52530:CDS | 45.0% | |
| TTATCATTAGGGGTGGGAAC+AGG | + | chr1.3:56293660-56293679 | None:intergenic | 45.0% | |
| ! | AGATCTCTCTCCATTGGTTG+TGG | - | chr1.3:56292965-56292984 | MS.gene52530:intron | 45.0% |
| ! | AGCGAGATAGAGAGCCTTTT+TGG | + | chr1.3:56291797-56291816 | None:intergenic | 45.0% |
| ! | CTGGAGTTATCAGTTGGTGT+CGG | - | chr1.3:56294511-56294530 | MS.gene52530:CDS | 45.0% |
| ! | TCCATTGGTTGTGGTGATGA+TGG | - | chr1.3:56292974-56292993 | MS.gene52530:intron | 45.0% |
| !! | ACTTCTTAACTTGTGCCTCG+AGG | - | chr1.3:56292836-56292855 | MS.gene52530:intron | 45.0% |
| !! | ATGAGCCTATGACGGGTAAT+AGG | + | chr1.3:56293179-56293198 | None:intergenic | 45.0% |
| !! | CGGACAGTTCTGAAATCCTT+CGG | + | chr1.3:56294491-56294510 | None:intergenic | 45.0% |
| !!! | TTTTGAAGTAGGCCAGGCTT+AGG | + | chr1.3:56293137-56293156 | None:intergenic | 45.0% |
| AGGATTTCAGAACTGTCCGC+TGG | - | chr1.3:56294492-56294511 | MS.gene52530:intron | 50.0% | |
| ATGATGGTCGATCTTGCAGC+TGG | - | chr1.3:56292990-56293009 | MS.gene52530:intron | 50.0% | |
| ATTGCAGGAATGGTGGTCTG+TGG | - | chr1.3:56294102-56294121 | MS.gene52530:intron | 50.0% | |
| CACCCATCACTTCTCACACT+AGG | + | chr1.3:56294622-56294641 | None:intergenic | 50.0% | |
| CGCACGACTCCAATTGATGT+TGG | - | chr1.3:56291646-56291665 | MS.gene52530:CDS | 50.0% | |
| CTTCGTTATGTGTGGTGGCT+TGG | - | chr1.3:56294385-56294404 | MS.gene52530:intron | 50.0% | |
| GACTTTGTAAGGCCTAAGCC+TGG | - | chr1.3:56293122-56293141 | MS.gene52530:intron | 50.0% | |
| GCCTGGCCTGACCTATTTAA+AGG | - | chr1.3:56293206-56293225 | MS.gene52530:intron | 50.0% | |
| GGCTTAGATATAGGGACGGA+GGG | + | chr1.3:56292240-56292259 | None:intergenic | 50.0% | |
| GGCTTAGGCCTTACAAAGTC+CGG | + | chr1.3:56293122-56293141 | None:intergenic | 50.0% | |
| GGGTGGTTGGAGATTGAGAT+TGG | - | chr1.3:56294637-56294656 | MS.gene52530:CDS | 50.0% | |
| TGTCCGCTGGAGTTATCAGT+TGG | - | chr1.3:56294505-56294524 | MS.gene52530:intron | 50.0% | |
| TGTGTTGGACAGGTTTCACG+AGG | - | chr1.3:56294354-56294373 | MS.gene52530:intron | 50.0% | |
| ! | AGTCGTGCGAGAGAGTATGA+TGG | + | chr1.3:56291635-56291654 | None:intergenic | 50.0% |
| ! | CCGTCATAGGCTCATTTTCG+AGG | - | chr1.3:56293184-56293203 | MS.gene52530:intron | 50.0% |
| ! | CTAGTGTGAGAAGTGATGGG+TGG | - | chr1.3:56294620-56294639 | MS.gene52530:CDS | 50.0% |
| !! | ATAGGCTCATTTTCGAGGCC+TGG | - | chr1.3:56293189-56293208 | MS.gene52530:intron | 50.0% |
| !! | CCGTCGATTCTGATGATGTC+TGG | - | chr1.3:56291704-56291723 | MS.gene52530:CDS | 50.0% |
| !! | GAGTTATCAGTTGGTGTCGG+AGG | - | chr1.3:56294514-56294533 | MS.gene52530:CDS | 50.0% |
| !! | GGCCGAGCTAGGCTTTAAAT+AGG | - | chr1.3:56293603-56293622 | MS.gene52530:intron | 50.0% |
| !! | TGTGAGAAGTGATGGGTGGT+TGG | - | chr1.3:56294624-56294643 | MS.gene52530:CDS | 50.0% |
| !! | TGTGGTGGCTTGGTATTCGT+TGG | - | chr1.3:56294395-56294414 | MS.gene52530:intron | 50.0% |
| AGGCTGCACAACAGAGTAGC+AGG | - | chr1.3:56294586-56294605 | MS.gene52530:CDS | 55.0% | |
| CCTGGCCTATTACCCGTCAT+AGG | - | chr1.3:56293171-56293190 | MS.gene52530:intron | 55.0% | |
| GGGCTTAGATATAGGGACGG+AGG | + | chr1.3:56292241-56292260 | None:intergenic | 55.0% | |
| GGGGTGGAAATAGGCTAGAC+CGG | - | chr1.3:56293095-56293114 | MS.gene52530:intron | 55.0% | |
| GGGTGGAAATAGGCTAGACC+GGG | - | chr1.3:56293096-56293115 | MS.gene52530:intron | 55.0% | |
| !! | CCTATGACGGGTAATAGGCC+AGG | + | chr1.3:56293174-56293193 | None:intergenic | 55.0% |
| ACGGGTAATAGGCCAGGCTC+AGG | + | chr1.3:56293168-56293187 | None:intergenic | 60.0% | |
| AGACCGGGCCGGACTTTGTA+AGG | - | chr1.3:56293111-56293130 | MS.gene52530:intron | 60.0% | |
| AGGCCTTACAAAGTCCGGCC+CGG | + | chr1.3:56293117-56293136 | None:intergenic | 60.0% | |
| ATTAGGGGTGGGAACAGGCC+AGG | + | chr1.3:56293655-56293674 | None:intergenic | 60.0% | |
| GGAAATAGGCTAGACCGGGC+CGG | - | chr1.3:56293100-56293119 | MS.gene52530:intron | 60.0% | |
| TAAACGAGCTGGGCCGAGCT+AGG | - | chr1.3:56293592-56293611 | MS.gene52530:intron | 60.0% | |
| AGCTTAACAGGGCGGCCCGA+CGG | - | chr1.3:56293486-56293505 | MS.gene52530:intron | 65.0% | |
| GCTAGGCCATAGGCCCCTGT+CGG | - | chr1.3:56293625-56293644 | MS.gene52530:intron | 65.0% | |
| ! | GGCGGCCCGACGGACTTAAT+AGG | - | chr1.3:56293496-56293515 | MS.gene52530:intron | 65.0% |
| AACAGGCCAGGCCGTCCGAC+AGG | + | chr1.3:56293643-56293662 | None:intergenic | 70.0% | |
| ACAGGCCAGGCCGTCCGACA+GGG | + | chr1.3:56293642-56293661 | None:intergenic | 70.0% | |
| GGCCATAGGCCCCTGTCGGA+CGG | - | chr1.3:56293629-56293648 | MS.gene52530:intron | 70.0% | |
| CAGGCCAGGCCGTCCGACAG+GGG | + | chr1.3:56293641-56293660 | None:intergenic | 75.0% | |
| GGCCGTCCGACAGGGGCCTA+TGG | + | chr1.3:56293634-56293653 | None:intergenic | 75.0% | |
| TAGGCCCCTGTCGGACGGCC+TGG | - | chr1.3:56293634-56293653 | MS.gene52530:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 56291595 | 56294768 | 56291595 | ID=MS.gene52530 |
| chr1.3 | mRNA | 56291595 | 56294768 | 56291595 | ID=MS.gene52530.t1;Parent=MS.gene52530 |
| chr1.3 | exon | 56294508 | 56294768 | 56294508 | ID=MS.gene52530.t1.exon1;Parent=MS.gene52530.t1 |
| chr1.3 | CDS | 56294508 | 56294768 | 56294508 | ID=cds.MS.gene52530.t1;Parent=MS.gene52530.t1 |
| chr1.3 | exon | 56293331 | 56293449 | 56293331 | ID=MS.gene52530.t1.exon2;Parent=MS.gene52530.t1 |
| chr1.3 | CDS | 56293331 | 56293449 | 56293331 | ID=cds.MS.gene52530.t1;Parent=MS.gene52530.t1 |
| chr1.3 | exon | 56291595 | 56291997 | 56291595 | ID=MS.gene52530.t1.exon3;Parent=MS.gene52530.t1 |
| chr1.3 | CDS | 56291595 | 56291997 | 56291595 | ID=cds.MS.gene52530.t1;Parent=MS.gene52530.t1 |
| Gene Sequence |
| Protein sequence |
