Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74877.t1 | XP_003590891.2 | 94.4 | 252 | 14 | 0 | 88 | 339 | 16 | 267 | 2.70E-134 | 488.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74877.t1 | Q9ZVQ6 | 47.0 | 253 | 120 | 5 | 88 | 336 | 26 | 268 | 9.8e-61 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74877.t1 | G7I5M1 | 94.4 | 252 | 14 | 0 | 88 | 339 | 16 | 267 | 1.9e-134 | 488.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74877.t1 | MTR_1g079380 | 94.444 | 252 | 14 | 0 | 88 | 339 | 16 | 267 | 4.88e-167 | 467 |
| MS.gene74877.t1 | MTR_1g079380 | 77.778 | 72 | 16 | 0 | 16 | 87 | 128 | 199 | 2.15e-29 | 114 |
| MS.gene74877.t1 | MTR_1g079370 | 84.000 | 250 | 40 | 0 | 88 | 337 | 16 | 265 | 5.86e-157 | 440 |
| MS.gene74877.t1 | MTR_1g079370 | 77.778 | 72 | 16 | 0 | 16 | 87 | 128 | 199 | 8.07e-29 | 112 |
| MS.gene74877.t1 | MTR_1g079180 | 75.494 | 253 | 56 | 3 | 88 | 337 | 16 | 265 | 1.99e-137 | 391 |
| MS.gene74877.t1 | MTR_1g079180 | 72.603 | 73 | 20 | 0 | 16 | 88 | 131 | 203 | 2.03e-27 | 108 |
| MS.gene74877.t1 | MTR_1g079460 | 73.047 | 256 | 64 | 2 | 88 | 340 | 16 | 269 | 9.98e-131 | 374 |
| MS.gene74877.t1 | MTR_1g079460 | 69.444 | 72 | 22 | 0 | 16 | 87 | 131 | 202 | 2.38e-22 | 95.1 |
| MS.gene74877.t1 | MTR_1g079260 | 70.000 | 260 | 71 | 2 | 88 | 340 | 16 | 275 | 1.73e-130 | 374 |
| MS.gene74877.t1 | MTR_1g079260 | 58.974 | 78 | 31 | 1 | 9 | 85 | 121 | 198 | 6.04e-20 | 88.6 |
| MS.gene74877.t1 | MTR_1g100597 | 70.881 | 261 | 67 | 2 | 88 | 340 | 16 | 275 | 8.25e-130 | 372 |
| MS.gene74877.t1 | MTR_1g100597 | 66.667 | 72 | 24 | 0 | 16 | 87 | 128 | 199 | 3.97e-22 | 94.7 |
| MS.gene74877.t1 | MTR_1g079200 | 71.765 | 255 | 61 | 4 | 88 | 337 | 16 | 264 | 8.26e-126 | 361 |
| MS.gene74877.t1 | MTR_1g079200 | 63.514 | 74 | 25 | 1 | 16 | 87 | 127 | 200 | 1.51e-19 | 87.0 |
| MS.gene74877.t1 | MTR_1g079230 | 65.134 | 261 | 83 | 2 | 88 | 340 | 16 | 276 | 8.73e-117 | 339 |
| MS.gene74877.t1 | MTR_1g079230 | 57.746 | 71 | 30 | 0 | 16 | 86 | 128 | 198 | 1.23e-16 | 79.3 |
| MS.gene74877.t1 | MTR_1g100613 | 68.033 | 244 | 66 | 2 | 88 | 320 | 2 | 244 | 7.58e-115 | 333 |
| MS.gene74877.t1 | MTR_1g100613 | 68.056 | 72 | 23 | 0 | 16 | 87 | 113 | 184 | 1.64e-23 | 97.8 |
| MS.gene74877.t1 | MTR_1g079850 | 62.825 | 269 | 84 | 3 | 88 | 340 | 16 | 284 | 1.11e-110 | 323 |
| MS.gene74877.t1 | MTR_1g079850 | 59.091 | 88 | 35 | 1 | 16 | 103 | 132 | 218 | 5.32e-22 | 94.4 |
| MS.gene74877.t1 | MTR_3g452600 | 64.173 | 254 | 85 | 4 | 88 | 340 | 22 | 270 | 4.69e-106 | 311 |
| MS.gene74877.t1 | MTR_3g452600 | 57.317 | 82 | 34 | 1 | 16 | 97 | 132 | 212 | 3.67e-17 | 80.5 |
| MS.gene74877.t1 | MTR_1g079250 | 60.902 | 266 | 91 | 5 | 88 | 340 | 16 | 281 | 4.02e-101 | 300 |
| MS.gene74877.t1 | MTR_1g079250 | 47.525 | 101 | 50 | 2 | 16 | 113 | 131 | 231 | 1.28e-15 | 76.6 |
| MS.gene74877.t1 | MTR_3g006850 | 57.586 | 290 | 86 | 4 | 88 | 340 | 29 | 318 | 3.21e-99 | 296 |
| MS.gene74877.t1 | MTR_3g006850 | 58.667 | 75 | 31 | 0 | 16 | 90 | 154 | 228 | 1.32e-18 | 85.5 |
| MS.gene74877.t1 | MTR_1g026510 | 56.458 | 271 | 100 | 6 | 88 | 340 | 16 | 286 | 2.17e-98 | 293 |
| MS.gene74877.t1 | MTR_1g026510 | 56.410 | 78 | 31 | 2 | 16 | 90 | 136 | 213 | 2.84e-15 | 75.5 |
| MS.gene74877.t1 | MTR_1g079410 | 56.641 | 256 | 103 | 4 | 88 | 337 | 20 | 273 | 1.86e-94 | 282 |
| MS.gene74877.t1 | MTR_1g079410 | 49.296 | 71 | 34 | 1 | 16 | 84 | 136 | 206 | 6.64e-11 | 62.4 |
| MS.gene74877.t1 | MTR_3g450990 | 56.667 | 270 | 95 | 6 | 88 | 340 | 22 | 286 | 5.42e-92 | 276 |
| MS.gene74877.t1 | MTR_3g450990 | 61.111 | 54 | 21 | 0 | 34 | 87 | 166 | 219 | 4.09e-12 | 66.2 |
| MS.gene74877.t1 | MTR_2g079100 | 58.635 | 249 | 93 | 2 | 88 | 334 | 21 | 261 | 2.66e-89 | 269 |
| MS.gene74877.t1 | MTR_2g079100 | 56.944 | 72 | 31 | 0 | 16 | 87 | 127 | 198 | 1.81e-16 | 78.6 |
| MS.gene74877.t1 | MTR_1g079350 | 57.088 | 261 | 100 | 6 | 88 | 337 | 16 | 275 | 3.07e-89 | 269 |
| MS.gene74877.t1 | MTR_1g079350 | 46.392 | 97 | 50 | 2 | 16 | 111 | 133 | 228 | 7.26e-13 | 68.2 |
| MS.gene74877.t1 | MTR_1g079140 | 49.117 | 283 | 110 | 5 | 88 | 337 | 25 | 306 | 1.80e-85 | 260 |
| MS.gene74877.t1 | MTR_1g078470 | 69.231 | 182 | 50 | 4 | 157 | 337 | 8 | 184 | 7.13e-82 | 247 |
| MS.gene74877.t1 | MTR_1g078470 | 70.833 | 72 | 21 | 0 | 16 | 87 | 52 | 123 | 1.67e-26 | 103 |
| MS.gene74877.t1 | MTR_1g079340 | 52.555 | 274 | 103 | 8 | 88 | 337 | 55 | 325 | 1.79e-76 | 238 |
| MS.gene74877.t1 | MTR_7g096300 | 56.723 | 238 | 84 | 6 | 88 | 317 | 16 | 242 | 1.93e-75 | 246 |
| MS.gene74877.t1 | MTR_7g096300 | 55.172 | 87 | 39 | 0 | 16 | 102 | 127 | 213 | 1.58e-18 | 87.0 |
| MS.gene74877.t1 | MTR_1g079400 | 47.232 | 271 | 107 | 4 | 88 | 337 | 24 | 279 | 4.03e-74 | 230 |
| MS.gene74877.t1 | MTR_7g112550 | 44.981 | 269 | 127 | 8 | 88 | 338 | 19 | 284 | 2.24e-62 | 200 |
| MS.gene74877.t1 | MTR_1g079240 | 60.221 | 181 | 61 | 4 | 157 | 337 | 10 | 179 | 9.94e-62 | 195 |
| MS.gene74877.t1 | MTR_1g079240 | 48.544 | 103 | 50 | 1 | 16 | 115 | 53 | 155 | 1.69e-19 | 85.1 |
| MS.gene74877.t1 | MTR_1g083580 | 40.377 | 265 | 140 | 8 | 88 | 337 | 20 | 281 | 8.46e-57 | 186 |
| MS.gene74877.t1 | MTR_1g076870 | 66.418 | 134 | 29 | 1 | 200 | 317 | 2 | 135 | 9.52e-54 | 173 |
| MS.gene74877.t1 | MTR_1g076870 | 66.667 | 72 | 24 | 0 | 16 | 87 | 2 | 73 | 1.48e-22 | 92.0 |
| MS.gene74877.t1 | MTR_7g112560 | 37.891 | 256 | 142 | 6 | 88 | 337 | 13 | 257 | 2.50e-51 | 171 |
| MS.gene74877.t1 | MTR_1g079130 | 46.561 | 189 | 77 | 4 | 173 | 337 | 1 | 189 | 1.46e-48 | 162 |
| MS.gene74877.t1 | MTR_4g023570 | 36.111 | 252 | 132 | 6 | 88 | 337 | 13 | 237 | 3.34e-44 | 152 |
| MS.gene74877.t1 | MTR_1g079350 | 51.316 | 152 | 63 | 4 | 88 | 231 | 16 | 164 | 1.75e-39 | 139 |
| MS.gene74877.t1 | MTR_1g079210 | 56.911 | 123 | 41 | 1 | 201 | 311 | 7 | 129 | 1.03e-38 | 134 |
| MS.gene74877.t1 | MTR_1g079210 | 61.429 | 70 | 27 | 0 | 17 | 86 | 7 | 76 | 8.09e-20 | 84.7 |
| MS.gene74877.t1 | MTR_3g058640 | 59.804 | 102 | 39 | 1 | 200 | 301 | 7 | 106 | 1.08e-34 | 123 |
| MS.gene74877.t1 | MTR_3g058640 | 51.282 | 78 | 38 | 0 | 10 | 87 | 1 | 78 | 2.71e-15 | 71.2 |
| MS.gene74877.t1 | MTR_7g096310 | 49.333 | 150 | 68 | 3 | 110 | 257 | 19 | 162 | 5.14e-33 | 120 |
| MS.gene74877.t1 | MTR_7g096310 | 53.731 | 67 | 31 | 0 | 4 | 70 | 93 | 159 | 1.53e-12 | 65.5 |
| MS.gene74877.t1 | MTR_2g042540 | 63.333 | 90 | 31 | 2 | 88 | 175 | 16 | 105 | 4.16e-28 | 106 |
| MS.gene74877.t1 | MTR_4g083970 | 30.288 | 208 | 121 | 3 | 135 | 337 | 102 | 290 | 5.41e-28 | 110 |
| MS.gene74877.t1 | MTR_1g078460 | 73.239 | 71 | 19 | 0 | 89 | 159 | 80 | 150 | 3.20e-27 | 105 |
| MS.gene74877.t1 | MTR_1g079220 | 70.588 | 68 | 18 | 1 | 237 | 304 | 1 | 66 | 2.34e-23 | 92.4 |
| MS.gene74877.t1 | MTR_7g103380 | 25.000 | 260 | 169 | 7 | 92 | 336 | 35 | 283 | 4.29e-21 | 92.0 |
| MS.gene74877.t1 | MTR_1g079390 | 76.000 | 50 | 10 | 2 | 283 | 332 | 8 | 55 | 8.30e-19 | 79.3 |
| MS.gene74877.t1 | MTR_0113s0040 | 31.492 | 181 | 109 | 6 | 76 | 246 | 16 | 191 | 4.55e-17 | 80.5 |
| MS.gene74877.t1 | MTR_0002s0020 | 32.515 | 163 | 96 | 4 | 93 | 246 | 39 | 196 | 8.39e-16 | 77.0 |
| MS.gene74877.t1 | MTR_1g101390 | 32.692 | 156 | 100 | 3 | 93 | 246 | 45 | 197 | 5.02e-14 | 72.0 |
| MS.gene74877.t1 | MTR_5g010800 | 32.576 | 132 | 80 | 4 | 93 | 219 | 34 | 161 | 1.76e-13 | 70.1 |
| MS.gene74877.t1 | MTR_4g102770 | 31.783 | 129 | 84 | 2 | 93 | 218 | 36 | 163 | 3.94e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74877.t1 | AT2G02360 | 47.036 | 253 | 120 | 5 | 88 | 336 | 26 | 268 | 7.40e-76 | 234 |
| MS.gene74877.t1 | AT2G02360 | 42.105 | 76 | 43 | 1 | 16 | 90 | 135 | 210 | 5.94e-11 | 62.8 |
| MS.gene74877.t1 | AT1G80110 | 45.783 | 249 | 129 | 3 | 88 | 336 | 13 | 255 | 7.88e-70 | 219 |
| MS.gene74877.t1 | AT2G02240 | 45.020 | 251 | 129 | 5 | 88 | 336 | 73 | 316 | 3.64e-68 | 216 |
| MS.gene74877.t1 | AT2G02340 | 44.314 | 255 | 135 | 4 | 88 | 336 | 48 | 301 | 1.22e-67 | 214 |
| MS.gene74877.t1 | AT2G02250 | 44.269 | 253 | 129 | 7 | 88 | 336 | 59 | 303 | 8.66e-66 | 210 |
| MS.gene74877.t1 | AT2G02230 | 38.176 | 296 | 137 | 7 | 88 | 340 | 44 | 336 | 1.01e-62 | 203 |
| MS.gene74877.t1 | AT1G09155 | 40.741 | 270 | 139 | 7 | 88 | 337 | 12 | 280 | 1.43e-54 | 181 |
| MS.gene74877.t1 | AT2G02350 | 37.367 | 281 | 164 | 8 | 60 | 336 | 10 | 282 | 9.10e-53 | 176 |
| MS.gene74877.t1 | AT1G56240 | 40.977 | 266 | 136 | 6 | 91 | 336 | 16 | 280 | 4.28e-51 | 171 |
| MS.gene74877.t1 | AT1G56250 | 40.824 | 267 | 137 | 6 | 91 | 337 | 16 | 281 | 8.12e-51 | 171 |
| MS.gene74877.t1 | AT2G02320 | 40.234 | 256 | 137 | 7 | 88 | 336 | 52 | 298 | 1.42e-50 | 171 |
| MS.gene74877.t1 | AT2G02310 | 35.039 | 254 | 155 | 5 | 88 | 337 | 57 | 304 | 7.69e-47 | 161 |
| MS.gene74877.t1 | AT2G02300 | 38.189 | 254 | 128 | 7 | 91 | 337 | 50 | 281 | 5.92e-45 | 155 |
| MS.gene74877.t1 | AT5G24560 | 50.000 | 130 | 62 | 1 | 88 | 217 | 15 | 141 | 4.26e-38 | 135 |
| MS.gene74877.t1 | AT5G24560 | 57.143 | 49 | 20 | 1 | 289 | 337 | 145 | 192 | 3.23e-13 | 68.2 |
| MS.gene74877.t1 | AT2G02350 | 36.310 | 168 | 100 | 5 | 173 | 336 | 1 | 165 | 2.44e-27 | 106 |
| MS.gene74877.t1 | AT3G53000 | 28.958 | 259 | 159 | 7 | 92 | 336 | 37 | 284 | 4.79e-25 | 103 |
| MS.gene74877.t1 | AT1G33920 | 28.161 | 174 | 103 | 4 | 168 | 337 | 9 | 164 | 3.15e-19 | 84.0 |
| MS.gene74877.t1 | AT4G19850 | 29.282 | 181 | 102 | 5 | 164 | 337 | 15 | 176 | 2.61e-18 | 81.6 |
| MS.gene74877.t1 | AT4G19850 | 29.282 | 181 | 102 | 5 | 164 | 337 | 57 | 218 | 3.76e-18 | 82.4 |
| MS.gene74877.t1 | AT4G19840 | 31.765 | 170 | 95 | 7 | 171 | 337 | 94 | 245 | 1.10e-17 | 81.6 |
| MS.gene74877.t1 | AT3G61060 | 23.596 | 267 | 164 | 7 | 88 | 337 | 37 | 280 | 1.81e-16 | 79.0 |
| MS.gene74877.t1 | AT3G61060 | 23.221 | 267 | 166 | 6 | 88 | 337 | 37 | 281 | 2.89e-16 | 78.6 |
| MS.gene74877.t1 | AT1G65390 | 28.070 | 171 | 101 | 3 | 172 | 338 | 259 | 411 | 2.48e-15 | 77.0 |
| MS.gene74877.t1 | AT1G12710 | 27.513 | 189 | 119 | 4 | 88 | 261 | 40 | 225 | 6.16e-13 | 68.9 |
| MS.gene74877.t1 | AT1G63090 | 31.081 | 148 | 94 | 4 | 93 | 237 | 43 | 185 | 7.80e-13 | 68.6 |
| MS.gene74877.t1 | AT5G52120 | 26.103 | 272 | 155 | 8 | 93 | 339 | 38 | 288 | 8.23e-12 | 65.5 |
| MS.gene74877.t1 | AT4G19850 | 29.861 | 144 | 76 | 4 | 164 | 301 | 57 | 181 | 1.37e-11 | 63.9 |
| MS.gene74877.t1 | AT2G26820 | 24.419 | 172 | 112 | 3 | 169 | 336 | 320 | 477 | 3.86e-11 | 64.3 |
| MS.gene74877.t1 | AT2G26820 | 22.995 | 187 | 121 | 4 | 159 | 336 | 289 | 461 | 6.82e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCCGCATATTGAGTATT+TGG | 0.191589 | 1.1:+59000653 | None:intergenic |
| TAGATCTCTTGCCATTGTTT+GGG | 0.244067 | 1.1:-59002867 | MS.gene74877:CDS |
| CTAGATCTCTTGCCATTGTT+TGG | 0.245415 | 1.1:-59002868 | MS.gene74877:CDS |
| CATCATCGATCATGATAAAA+AGG | 0.292355 | 1.1:-59003016 | MS.gene74877:intron |
| TTCAAAATGATTAATGCTTC+GGG | 0.296562 | 1.1:-59000623 | MS.gene74877:CDS |
| TGCAGCCTACCTTCTACATT+TGG | 0.306134 | 1.1:+59005103 | None:intergenic |
| AAGCCGCATATTGAGTATTT+GGG | 0.318920 | 1.1:+59000654 | None:intergenic |
| TCAAAAGCCTCAGCGACTTC+AGG | 0.325704 | 1.1:+59005304 | None:intergenic |
| GTTCAAAATGATTAATGCTT+CGG | 0.326412 | 1.1:-59000624 | MS.gene74877:CDS |
| TCAACAAGCTTAGCGACTTC+AGG | 0.333696 | 1.1:+59000725 | None:intergenic |
| TACAGACAAGGGGTGGTAAT+TGG | 0.334982 | 1.1:-59000379 | MS.gene74877:CDS |
| TGCGGCCTACCTTCCACATT+TGG | 0.361432 | 1.1:+59000524 | None:intergenic |
| GGATTTCTATGCCTGATTCC+AGG | 0.379925 | 1.1:-59002820 | MS.gene74877:intron |
| TTGTCTGTATCACATTCATC+TGG | 0.386190 | 1.1:+59000393 | None:intergenic |
| GGGGTCATGATGAGCGCTAT+TGG | 0.412830 | 1.1:-59002847 | MS.gene74877:CDS |
| TCAAGAGCTAACCTGGAATC+AGG | 0.413242 | 1.1:+59002809 | None:intergenic |
| CCTCCGATTCTGACGCTGTA+TGG | 0.419563 | 1.1:-59003146 | MS.gene74877:CDS |
| TAGTACTAAAATTGTCTGTT+TGG | 0.420764 | 1.1:-59000549 | MS.gene74877:CDS |
| AGGAAGACCGATGATGTTCA+TGG | 0.428777 | 1.1:-59006186 | None:intergenic |
| ATGATGAGCGCTATTGGAAC+TGG | 0.437217 | 1.1:-59002841 | MS.gene74877:CDS |
| CTAAGCTTGTTGATGTGTGT+TGG | 0.438622 | 1.1:-59000715 | MS.gene74877:CDS |
| GTGTGTTGGCTTGAAATTCA+TGG | 0.446205 | 1.1:-59000701 | MS.gene74877:CDS |
| TTCTTGAAGGAATAGAAGTT+AGG | 0.449929 | 1.1:-59000343 | MS.gene74877:CDS |
| CAAAAGCCTCAGCGACTTCA+GGG | 0.450000 | 1.1:+59005305 | None:intergenic |
| GGGTGGTTGGAGATTGAGAT+GGG | 0.458032 | 1.1:-59000452 | MS.gene74877:CDS |
| ATTCCATACAGCGTCAGAAT+CGG | 0.465501 | 1.1:+59003143 | None:intergenic |
| AAGAGAGGTCTCGTTCTTGA+AGG | 0.466484 | 1.1:-59000356 | MS.gene74877:CDS |
| GTTGGTTAATTGTTATACTT+AGG | 0.467370 | 1.1:+59000320 | None:intergenic |
| TTATCATGATCGATGATGAC+AGG | 0.470528 | 1.1:+59003021 | None:intergenic |
| TAGTACTAAGCATGTCTGTT+TGG | 0.474274 | 1.1:-59005128 | MS.gene74877:CDS |
| GTGGAGTTATCAGTTGTTGT+TGG | 0.475356 | 1.1:-59005163 | MS.gene74877:CDS |
| CAACAAGCTTAGCGACTTCA+GGG | 0.483357 | 1.1:+59000726 | None:intergenic |
| TGTTTGGATCCAAATGTAGA+AGG | 0.484761 | 1.1:-59005112 | MS.gene74877:intron |
| CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1.1:-59000473 | MS.gene74877:CDS |
| CAGGACGGTTCTGAAATCCT+TGG | 0.493726 | 1.1:+59005185 | None:intergenic |
| CATATTGAGTATTTGGGGAC+AGG | 0.497456 | 1.1:+59000660 | None:intergenic |
| CGTCCTGCGGATTTATCAGT+TGG | 0.505742 | 1.1:-59000590 | MS.gene74877:CDS |
| GTAGGAGCGTTGGCGAGTAA+AGG | 0.512124 | 1.1:+59003078 | None:intergenic |
| AGGACGGTTCTGAAATCCTT+GGG | 0.513214 | 1.1:+59005186 | None:intergenic |
| TGGGTGGTTGGAGATTGAGA+TGG | 0.517146 | 1.1:-59000453 | MS.gene74877:CDS |
| GGAGGCAGATCGGAAAGTCT+TGG | 0.523752 | 1.1:+59003164 | None:intergenic |
| GAGAGTCTGCCGGCGTCGAG+TGG | 0.527104 | 1.1:+59003195 | None:intergenic |
| AGTATTTAAAGACAGAATAA+CGG | 0.535672 | 1.1:+59005246 | None:intergenic |
| AGATCTCTTGCCATTGTTTG+GGG | 0.537136 | 1.1:-59002866 | MS.gene74877:CDS |
| GTCTTTAAATACTCAATATG+CGG | 0.537948 | 1.1:-59005236 | MS.gene74877:CDS |
| GAGTTATCAGTTGTTGTTGG+AGG | 0.538485 | 1.1:-59005160 | MS.gene74877:CDS |
| CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1.1:+59000470 | None:intergenic |
| CAGCCGCATGACAGAGTACT+CGG | 0.550737 | 1.1:-59000503 | MS.gene74877:CDS |
| GGGATTTCTGAACCGTCCTG+CGG | 0.552108 | 1.1:-59000603 | MS.gene74877:CDS |
| AGTACTCTGTCATGCGGCTG+CGG | 0.560272 | 1.1:+59000506 | None:intergenic |
| GATTTATCAGTTGGTGTCGA+AGG | 0.564414 | 1.1:-59000581 | MS.gene74877:CDS |
| CGTCAGAATCGGAGGCAGAT+CGG | 0.566379 | 1.1:+59003154 | None:intergenic |
| GGAAACGACGGAGAGTCTGC+CGG | 0.570360 | 1.1:+59003185 | None:intergenic |
| ATGATAGATGAAATATCAGA+AGG | 0.573253 | 1.1:+59003111 | None:intergenic |
| TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1.1:-59000465 | MS.gene74877:CDS |
| GTGCGTTGGCTTGAAATTCA+CGG | 0.578856 | 1.1:-59005280 | MS.gene74877:CDS |
| AGACATGCTTAGTACTACTC+TGG | 0.585468 | 1.1:+59005134 | None:intergenic |
| CTCATCATGACCCCAAACAA+TGG | 0.587715 | 1.1:+59002856 | None:intergenic |
| TGGATCCAAATGTGGAAGGT+AGG | 0.591841 | 1.1:-59000529 | MS.gene74877:CDS |
| GTGGTTGGAGATTGAGATGG+GGG | 0.596500 | 1.1:-59000450 | MS.gene74877:CDS |
| TTATCAGTTGGTGTCGAAGG+TGG | 0.596520 | 1.1:-59000578 | MS.gene74877:CDS |
| AGCCGCATATTGAGTATTTG+GGG | 0.603362 | 1.1:+59000655 | None:intergenic |
| AGGGGTGGTAATTGGAAGAG+AGG | 0.612751 | 1.1:-59000371 | MS.gene74877:CDS |
| CCATACAGCGTCAGAATCGG+AGG | 0.612806 | 1.1:+59003146 | None:intergenic |
| CAACTTGAGTGTAATGAGCA+TGG | 0.617593 | 1.1:+59006151 | None:intergenic |
| TGTAATGAGCATGGTAGACA+TGG | 0.618134 | 1.1:+59006160 | None:intergenic |
| GGTGGTTGGAGATTGAGATG+GGG | 0.619250 | 1.1:-59000451 | MS.gene74877:CDS |
| ACACCAACTGATAAATCCGC+AGG | 0.623886 | 1.1:+59000587 | None:intergenic |
| CAGTTTCCCTGAAGTCGCTG+AGG | 0.625187 | 1.1:-59005311 | MS.gene74877:CDS |
| TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1.1:-59000537 | MS.gene74877:CDS |
| TATCATGATCGATGATGACA+GGG | 0.627429 | 1.1:+59003022 | None:intergenic |
| ATGGCAACCATGAACATCAT+CGG | 0.628907 | 1.1:+59006179 | None:intergenic |
| ACAACAACTGATAACTCCAC+AGG | 0.631323 | 1.1:+59005166 | None:intergenic |
| GTCCCCAAATACTCAATATG+CGG | 0.633956 | 1.1:-59000657 | MS.gene74877:CDS |
| GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1.1:-59000472 | MS.gene74877:CDS |
| AGTATTTGGGGACAGGACGA+TGG | 0.644084 | 1.1:+59000667 | None:intergenic |
| TTCAAGATGATTGATGCCCA+AGG | 0.650359 | 1.1:-59005202 | MS.gene74877:CDS |
| AGGATTTCAGAACCGTCCTG+TGG | 0.654705 | 1.1:-59005182 | MS.gene74877:CDS |
| AGATGAATGTGATACAGACA+AGG | 0.660761 | 1.1:-59000391 | MS.gene74877:CDS |
| AATGTGATACAGACAAGGGG+TGG | 0.670541 | 1.1:-59000386 | MS.gene74877:CDS |
| TCGGAAAGTCTTGGAAACGA+CGG | 0.681316 | 1.1:+59003173 | None:intergenic |
| AATCCGAGTACTCTGTCATG+CGG | 0.684286 | 1.1:+59000500 | None:intergenic |
| GATGAATGTGATACAGACAA+GGG | 0.695518 | 1.1:-59000390 | MS.gene74877:CDS |
| TGTTTGGATCCAAATGTGGA+AGG | 0.703248 | 1.1:-59000533 | MS.gene74877:CDS |
| ATGAATGTGATACAGACAAG+GGG | 0.709532 | 1.1:-59000389 | MS.gene74877:CDS |
| CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1.1:-59000469 | MS.gene74877:CDS |
| CAACTGATAACTCCACAGGA+CGG | 0.710853 | 1.1:+59005170 | None:intergenic |
| CAACTGATAAATCCGCAGGA+CGG | 0.713336 | 1.1:+59000591 | None:intergenic |
| CGTACAACTCCACTCGACGC+CGG | 0.717247 | 1.1:-59003204 | MS.gene74877:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+CGG | + | chr1.1:59005652-59005633 | None:intergenic | 0.0% |
| !!! | AATAATATTTTTAAAAAAAA+AGG | + | chr1.1:59002152-59002171 | None:intergenic | 0.0% |
| !!! | TAAAATTTTGTATCTTTATA+AGG | - | chr1.1:59001871-59001890 | MS.gene74877:intron | 10.0% |
| !! | AGTTTCTTAAAAAATATGAA+AGG | + | chr1.1:59004021-59004040 | None:intergenic | 15.0% |
| !! | CATTAAAAAATATATAGGTT+CGG | + | chr1.1:59004603-59004622 | None:intergenic | 15.0% |
| !!! | ATAAAGATACAAAATTTTAC+CGG | + | chr1.1:59001870-59001889 | None:intergenic | 15.0% |
| !!! | TAAGTTATATATGTTGTTTT+AGG | + | chr1.1:59000986-59001005 | None:intergenic | 15.0% |
| !!! | TTATTAACTTCATTTTCATT+TGG | + | chr1.1:59002913-59002932 | None:intergenic | 15.0% |
| !!! | TTATTTGAAACTAAATTATG+TGG | + | chr1.1:59000406-59000425 | None:intergenic | 15.0% |
| !!! | TTTCTATAGTATATATCTTT+TGG | + | chr1.1:59002129-59002148 | None:intergenic | 15.0% |
| !! | AATATGAAAGGACAAAATAA+AGG | + | chr1.1:59004009-59004028 | None:intergenic | 20.0% |
| !! | ACTATAATTCAGTATAGAAA+TGG | + | chr1.1:59003181-59003200 | None:intergenic | 20.0% |
| !! | AGTATTTAAAGACAGAATAA+CGG | + | chr1.1:59001258-59001277 | None:intergenic | 20.0% |
| !! | ATAGTGTTTAGTAAAATTAG+CGG | + | chr1.1:59004048-59004067 | None:intergenic | 20.0% |
| !! | ATATTGGAGTATATTACATT+AGG | - | chr1.1:59001790-59001809 | MS.gene74877:intron | 20.0% |
| !! | ATTGTAAACACAAATATGAA+AGG | + | chr1.1:59002297-59002316 | None:intergenic | 20.0% |
| !! | CATGACAATGTTTAAAAATT+TGG | - | chr1.1:59001652-59001671 | MS.gene74877:intron | 20.0% |
| !! | TTGATTAACTCCTAATTAAT+AGG | - | chr1.1:59003711-59003730 | MS.gene74877:intron | 20.0% |
| !! | TTTCTAATTATACACACAAA+GGG | + | chr1.1:59002980-59002999 | None:intergenic | 20.0% |
| !!! | AAACATAATTTTTATGTCGT+TGG | - | chr1.1:59001941-59001960 | MS.gene74877:intron | 20.0% |
| !!! | AAATACGAAGTATCTATATA+GGG | + | chr1.1:59001094-59001113 | None:intergenic | 20.0% |
| !!! | AACATAATTTTTATGTCGTT+GGG | - | chr1.1:59001942-59001961 | MS.gene74877:intron | 20.0% |
| !!! | AGTCATATCCTTTTTTTTAT+AGG | - | chr1.1:59004151-59004170 | MS.gene74877:intron | 20.0% |
| !!! | ATACTTAAGATGAGTTTTTA+CGG | - | chr1.1:59002036-59002055 | MS.gene74877:intron | 20.0% |
| !!! | ATCAATTTTAACTTGAACAA+AGG | + | chr1.1:59004762-59004781 | None:intergenic | 20.0% |
| !!! | CACTAAAAGTAAAAACATTT+TGG | + | chr1.1:59005021-59005040 | None:intergenic | 20.0% |
| !!! | CTCTCTTTTTTTACTTTATT+CGG | + | chr1.1:59003143-59003162 | None:intergenic | 20.0% |
| !!! | CTTTTTGAAACTATATTATG+TGG | + | chr1.1:59004957-59004976 | None:intergenic | 20.0% |
| !!! | GATTTTTTAAGATGTTTAGT+TGG | - | chr1.1:59003545-59003564 | MS.gene74877:intron | 20.0% |
| !!! | GGTCTGATTTTTATAATTTT+TGG | + | chr1.1:59004636-59004655 | None:intergenic | 20.0% |
| !!! | TCTCTTTTTTTACTTTATTC+GGG | + | chr1.1:59003142-59003161 | None:intergenic | 20.0% |
| !!! | TTATGTTTTGTAAAGCATAA+TGG | + | chr1.1:59001929-59001948 | None:intergenic | 20.0% |
| !!! | TTTCACTTTTTTTTGTAATC+TGG | + | chr1.1:59002627-59002646 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTAAGATTGCAT+GGG | + | chr1.1:59003966-59003985 | None:intergenic | 20.0% |
| !!! | TTTTTTCAATTAAGATTGCA+TGG | + | chr1.1:59003967-59003986 | None:intergenic | 20.0% |
| ! | ACTGAACGTTCTTTAAATTT+GGG | + | chr1.1:59004372-59004391 | None:intergenic | 25.0% |
| ! | ATATAGTTGGAACAATTCAA+AGG | + | chr1.1:59001774-59001793 | None:intergenic | 25.0% |
| ! | ATGATAGATGAAATATCAGA+AGG | + | chr1.1:59003393-59003412 | None:intergenic | 25.0% |
| ! | ATTGTTTAGTAAACCTGAAT+GGG | + | chr1.1:59002859-59002878 | None:intergenic | 25.0% |
| ! | CATTCAAGCCTATAAAAAAA+AGG | + | chr1.1:59004162-59004181 | None:intergenic | 25.0% |
| ! | CTATCATAATCAGTTATGTT+TGG | - | chr1.1:59001019-59001038 | MS.gene74877:intron | 25.0% |
| ! | CTTCATCTTAAAATCAATGT+CGG | + | chr1.1:59003008-59003027 | None:intergenic | 25.0% |
| ! | GAGCAATTAGAGTTTAATTA+TGG | - | chr1.1:59002663-59002682 | MS.gene74877:intron | 25.0% |
| ! | GAGTATATTACATTAGGATT+AGG | - | chr1.1:59001796-59001815 | MS.gene74877:intron | 25.0% |
| ! | GTAATATACTCCAATATAGT+TGG | + | chr1.1:59001787-59001806 | None:intergenic | 25.0% |
| ! | GTACTATGTTCCTATTAATT+AGG | + | chr1.1:59003724-59003743 | None:intergenic | 25.0% |
| ! | GTACTCGACAAATAAAATAA+TGG | + | chr1.1:59004816-59004835 | None:intergenic | 25.0% |
| ! | GTCTTTAAATACTCAATATG+CGG | - | chr1.1:59001265-59001284 | MS.gene74877:intron | 25.0% |
| ! | GTTATGCAAATGCAATAATT+TGG | + | chr1.1:59001846-59001865 | None:intergenic | 25.0% |
| ! | GTTCAAAATGATTAATGCTT+CGG | - | chr1.1:59005877-59005896 | MS.gene74877:intron | 25.0% |
| ! | GTTTCTAATTATACACACAA+AGG | + | chr1.1:59002981-59003000 | None:intergenic | 25.0% |
| ! | TAATCAATAATGGCTTGATT+CGG | + | chr1.1:59003760-59003779 | None:intergenic | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | - | chr1.1:59005952-59005971 | MS.gene74877:intron | 25.0% |
| ! | TCTGTTTGGTAAAAAAATTG+CGG | + | chr1.1:59004132-59004151 | None:intergenic | 25.0% |
| ! | TGAGCAATATAAATAAAGTG+TGG | + | chr1.1:59001708-59001727 | None:intergenic | 25.0% |
| ! | TTAAGTCTCAAAGAAAACAT+GGG | + | chr1.1:59005281-59005300 | None:intergenic | 25.0% |
| ! | TTCAAAATGATTAATGCTTC+GGG | - | chr1.1:59005878-59005897 | MS.gene74877:intron | 25.0% |
| ! | TTGAAACTAAATTATGTGGA+AGG | + | chr1.1:59000402-59000421 | None:intergenic | 25.0% |
| ! | TTGAATTGTTCCAACTATAT+TGG | - | chr1.1:59001774-59001793 | MS.gene74877:intron | 25.0% |
| ! | TTGTAATGCAACAAACAAAT+TGG | + | chr1.1:59004657-59004676 | None:intergenic | 25.0% |
| !! | AAAAAAAACCACACATGTTT+TGG | + | chr1.1:59001976-59001995 | None:intergenic | 25.0% |
| !! | AATATTTTCCAAAACATGTG+TGG | - | chr1.1:59001965-59001984 | MS.gene74877:intron | 25.0% |
| !! | AATCAAGCCATTATTGATTA+GGG | - | chr1.1:59003760-59003779 | MS.gene74877:intron | 25.0% |
| !! | AGATATTTGAAATGAACAGT+TGG | - | chr1.1:59005159-59005178 | MS.gene74877:CDS | 25.0% |
| !! | CATCTTTTGTATACTACTTT+TGG | - | chr1.1:59001166-59001185 | MS.gene74877:intron | 25.0% |
| !! | CTGTTTTCATATATACATGA+TGG | + | chr1.1:59002368-59002387 | None:intergenic | 25.0% |
| !! | GAAATACGAAGTATCTATAT+AGG | + | chr1.1:59001095-59001114 | None:intergenic | 25.0% |
| !! | TAACTTCATTTTCATTTGGT+GGG | + | chr1.1:59002909-59002928 | None:intergenic | 25.0% |
| !! | TACTTAAGATGAGTTTTTAC+GGG | - | chr1.1:59002037-59002056 | MS.gene74877:intron | 25.0% |
| !! | TTAACTTCATTTTCATTTGG+TGG | + | chr1.1:59002910-59002929 | None:intergenic | 25.0% |
| !! | TTTTAGTCATACAAACTTAC+AGG | + | chr1.1:59003819-59003838 | None:intergenic | 25.0% |
| !!! | ATTTTAAGATGAAGGGTATT+GGG | - | chr1.1:59003014-59003033 | MS.gene74877:intron | 25.0% |
| !!! | GACATTGATTTTAAGATGAA+GGG | - | chr1.1:59003007-59003026 | MS.gene74877:intron | 25.0% |
| !!! | TAAGTAATATATGCTGTTTC+AGG | + | chr1.1:59005505-59005524 | None:intergenic | 25.0% |
| !!! | TTTTAACTTGAACAAAGGAA+TGG | + | chr1.1:59004757-59004776 | None:intergenic | 25.0% |
| !!! | TTTTTTACTTTATTCGGGAA+AGG | + | chr1.1:59003137-59003156 | None:intergenic | 25.0% |
| AAAAAGAATGACAGAGATTC+AGG | - | chr1.1:59003239-59003258 | MS.gene74877:intron | 30.0% | |
| AAAAAGGATATGACTCTGTT+TGG | + | chr1.1:59004146-59004165 | None:intergenic | 30.0% | |
| AACATAGTACTTGTTCTTGT+TGG | - | chr1.1:59003734-59003753 | MS.gene74877:intron | 30.0% | |
| AAGTTGTGTTTGATGAATGA+AGG | - | chr1.1:59002328-59002347 | MS.gene74877:intron | 30.0% | |
| ACAGTAATTGATCACTAACA+TGG | + | chr1.1:59004195-59004214 | None:intergenic | 30.0% | |
| ACTATACGAAGAAACAGTTT+GGG | + | chr1.1:59001681-59001700 | None:intergenic | 30.0% | |
| AGCAATTAGGAACACAAAAA+AGG | + | chr1.1:59004573-59004592 | None:intergenic | 30.0% | |
| AGTGATCAATTACTGTTGAT+GGG | - | chr1.1:59004199-59004218 | MS.gene74877:intron | 30.0% | |
| ATATATAAGCCATAAGCTAC+TGG | + | chr1.1:59003924-59003943 | None:intergenic | 30.0% | |
| ATGACTAAAAAAGATCCGTT+TGG | - | chr1.1:59003829-59003848 | MS.gene74877:intron | 30.0% | |
| ATGCAAGTCTAAAAACCTTA+TGG | + | chr1.1:59000472-59000491 | None:intergenic | 30.0% | |
| ATTCAAAAGGAGTAACAAAG+AGG | - | chr1.1:59004231-59004250 | MS.gene74877:intron | 30.0% | |
| ATTCCAAATTCTAAGTCACA+GGG | + | chr1.1:59004425-59004444 | None:intergenic | 30.0% | |
| CAGGTTCCTTAACTAAAAAT+TGG | + | chr1.1:59001053-59001072 | None:intergenic | 30.0% | |
| CAGTAATTGATCACTAACAT+GGG | + | chr1.1:59004194-59004213 | None:intergenic | 30.0% | |
| CAGTTAATTCTTATCAGATG+AGG | + | chr1.1:59004272-59004291 | None:intergenic | 30.0% | |
| CATCATCGATCATGATAAAA+AGG | - | chr1.1:59003485-59003504 | MS.gene74877:intron | 30.0% | |
| CTGAACGTTCTTTAAATTTG+GGG | + | chr1.1:59004371-59004390 | None:intergenic | 30.0% | |
| GACTGAACGTTCTTTAAATT+TGG | + | chr1.1:59004373-59004392 | None:intergenic | 30.0% | |
| GATGAATATGATATGAATGC+TGG | - | chr1.1:59000956-59000975 | MS.gene74877:intron | 30.0% | |
| GATTGTTTAGTAAACCTGAA+TGG | + | chr1.1:59002860-59002879 | None:intergenic | 30.0% | |
| GTAAAATCCCAAAGAAAACA+TGG | + | chr1.1:59000700-59000719 | None:intergenic | 30.0% | |
| GTTAAGTCTCAAAGAAAACA+TGG | + | chr1.1:59005282-59005301 | None:intergenic | 30.0% | |
| GTTATATCTACACATGTTCA+TGG | - | chr1.1:59004705-59004724 | MS.gene74877:intron | 30.0% | |
| TAAACAATCCACTGCAAAAA+GGG | - | chr1.1:59002871-59002890 | MS.gene74877:CDS | 30.0% | |
| TAAACTCTAATTGCTCTGTA+CGG | + | chr1.1:59002659-59002678 | None:intergenic | 30.0% | |
| TACTATACGAAGAAACAGTT+TGG | + | chr1.1:59001682-59001701 | None:intergenic | 30.0% | |
| TAGTGATCAATTACTGTTGA+TGG | - | chr1.1:59004198-59004217 | MS.gene74877:intron | 30.0% | |
| TCTAAACAAAACAGTCCAAA+TGG | - | chr1.1:59002523-59002542 | MS.gene74877:intron | 30.0% | |
| TGAACGTTCTTTAAATTTGG+GGG | + | chr1.1:59004370-59004389 | None:intergenic | 30.0% | |
| TGAGACTTAACGTATTGTTA+TGG | - | chr1.1:59005291-59005310 | MS.gene74877:CDS | 30.0% | |
| TGATACTTAGTTGAAGTGTA+TGG | + | chr1.1:59004456-59004475 | None:intergenic | 30.0% | |
| TGATGTCAACTAAATGAGTA+AGG | - | chr1.1:59005083-59005102 | MS.gene74877:intron | 30.0% | |
| TGTTTAGATTTATCCCAGTT+AGG | + | chr1.1:59002511-59002530 | None:intergenic | 30.0% | |
| TTATTGCATTTGCATAACAC+CGG | - | chr1.1:59001848-59001867 | MS.gene74877:intron | 30.0% | |
| TTCTTGAAGGAATAGAAGTT+AGG | - | chr1.1:59006158-59006177 | MS.gene74877:CDS | 30.0% | |
| TTCTTGAAGGGATAGAAATT+AGG | - | chr1.1:59001567-59001586 | MS.gene74877:intron | 30.0% | |
| TTTATTCGGGAAAGGAAATT+CGG | + | chr1.1:59003129-59003148 | None:intergenic | 30.0% | |
| TTTCAACAATAATAAGCCTC+AGG | + | chr1.1:59003524-59003543 | None:intergenic | 30.0% | |
| TTTCAATTGGAGAAAAAGAG+TGG | - | chr1.1:59003587-59003606 | MS.gene74877:intron | 30.0% | |
| ! | AAGTAGATGTCATTTAAGTG+AGG | - | chr1.1:59000934-59000953 | MS.gene74877:intron | 30.0% |
| ! | AGCTAGCTTATAGCTAATAA+AGG | + | chr1.1:59004092-59004111 | None:intergenic | 30.0% |
| ! | ATGAATGTGATGGAGATAAA+GGG | - | chr1.1:59001524-59001543 | MS.gene74877:intron | 30.0% |
| ! | CAGGATCGTTAACTAAATTT+TGG | + | chr1.1:59005592-59005611 | None:intergenic | 30.0% |
| ! | GAATCAAGCCATTATTGATT+AGG | - | chr1.1:59003759-59003778 | MS.gene74877:intron | 30.0% |
| ! | GATCGTTAACTAAATTTTGG+AGG | + | chr1.1:59005589-59005608 | None:intergenic | 30.0% |
| ! | TCATTTTCTCCCATACTTAA+AGG | + | chr1.1:59005471-59005490 | None:intergenic | 30.0% |
| ! | TGAAATGCAGAGTTTTCAAT+TGG | - | chr1.1:59003574-59003593 | MS.gene74877:intron | 30.0% |
| !! | AACTTCATTTTCATTTGGTG+GGG | + | chr1.1:59002908-59002927 | None:intergenic | 30.0% |
| !! | AGACAATTTTAGTACTACTC+TGG | + | chr1.1:59005949-59005968 | None:intergenic | 30.0% |
| !! | ATGTGTCTTTAAAACTCGAA+AGG | + | chr1.1:59002832-59002851 | None:intergenic | 30.0% |
| !! | GTTTTTACTTTTAGTGTGAC+TGG | - | chr1.1:59005025-59005044 | MS.gene74877:intron | 30.0% |
| !! | TGTGTCTTTAAAACTCGAAA+GGG | + | chr1.1:59002831-59002850 | None:intergenic | 30.0% |
| !!! | ACAGCTCCAATTTTTAGTTA+AGG | - | chr1.1:59001044-59001063 | MS.gene74877:intron | 30.0% |
| !!! | AGATAGAGATCTTTTTTGGT+AGG | + | chr1.1:59003444-59003463 | None:intergenic | 30.0% |
| !!! | AGCAAGATAGAGATCTTTTT+TGG | + | chr1.1:59003448-59003467 | None:intergenic | 30.0% |
| !!! | CGACATTGATTTTAAGATGA+AGG | - | chr1.1:59003006-59003025 | MS.gene74877:intron | 30.0% |
| !!! | GATTTTAAGATGAAGGGTAT+TGG | - | chr1.1:59003013-59003032 | MS.gene74877:intron | 30.0% |
| AAAATTCATAGCTACCACCT+CGG | - | chr1.1:59004337-59004356 | MS.gene74877:intron | 35.0% | |
| AAACGGACCCTAATCAATAA+TGG | + | chr1.1:59003770-59003789 | None:intergenic | 35.0% | |
| AACTTCATCCTTACACTATC+AGG | - | chr1.1:59005188-59005207 | MS.gene74877:CDS | 35.0% | |
| AAGAGCCATGGTAATTCAAT+GGG | + | chr1.1:59005320-59005339 | None:intergenic | 35.0% | |
| AAGCCGCATATTGAGTATTT+GGG | + | chr1.1:59001271-59001290 | None:intergenic | 35.0% | |
| AAGCTAATTCCAGTAGCTTA+TGG | - | chr1.1:59003912-59003931 | MS.gene74877:intron | 35.0% | |
| AAGTCGATGTCCTTTAAGTA+TGG | - | chr1.1:59005458-59005477 | MS.gene74877:intron | 35.0% | |
| ACACGTAAAAACTCATATCG+AGG | - | chr1.1:59002778-59002797 | MS.gene74877:intron | 35.0% | |
| ACACTTATCATGAGAAAGTG+AGG | - | chr1.1:59005426-59005445 | MS.gene74877:intron | 35.0% | |
| AGAAAACGACAGTTACCAAA+CGG | + | chr1.1:59003847-59003866 | None:intergenic | 35.0% | |
| AGAACTTCAGATGAATGTGA+TGG | - | chr1.1:59001514-59001533 | MS.gene74877:intron | 35.0% | |
| AGATGAATGTGATACAGACA+AGG | - | chr1.1:59006110-59006129 | MS.gene74877:intron | 35.0% | |
| AGTCGATGTCCTTTAAGTAT+GGG | - | chr1.1:59005459-59005478 | MS.gene74877:intron | 35.0% | |
| ATGAATGTGATACAGACAAG+GGG | - | chr1.1:59006112-59006131 | MS.gene74877:intron | 35.0% | |
| CAAATGTGTGTCTTACCAAA+CGG | + | chr1.1:59003787-59003806 | None:intergenic | 35.0% | |
| CACGTAAAAACTCATATCGA+GGG | - | chr1.1:59002779-59002798 | MS.gene74877:intron | 35.0% | |
| CATCGATCATGATAAAAAGG+TGG | - | chr1.1:59003488-59003507 | MS.gene74877:intron | 35.0% | |
| CTAAACAATCCACTGCAAAA+AGG | - | chr1.1:59002870-59002889 | MS.gene74877:CDS | 35.0% | |
| CTGTATCAAGATTCAAGATG+AGG | + | chr1.1:59000543-59000562 | None:intergenic | 35.0% | |
| GATGAATGTGATACAGACAA+GGG | - | chr1.1:59006111-59006130 | MS.gene74877:intron | 35.0% | |
| GATTATGATAGTCTTCTCAG+TGG | + | chr1.1:59001010-59001029 | None:intergenic | 35.0% | |
| GATTCCAAATTCTAAGTCAC+AGG | + | chr1.1:59004426-59004445 | None:intergenic | 35.0% | |
| GATTGTCACAACATAAGAGT+TGG | + | chr1.1:59005377-59005396 | None:intergenic | 35.0% | |
| GCTTGATTGTCACAAATCAA+GGG | + | chr1.1:59000859-59000878 | None:intergenic | 35.0% | |
| GGATTAGGATAATTGTGTCT+TGG | - | chr1.1:59001811-59001830 | MS.gene74877:intron | 35.0% | |
| GGTTACACGTAATGTATCTT+GGG | + | chr1.1:59000679-59000698 | None:intergenic | 35.0% | |
| GTATGGGAGAAAATGAATGT+TGG | - | chr1.1:59005475-59005494 | MS.gene74877:intron | 35.0% | |
| GTTGACTATTTGTCTCCATA+AGG | - | chr1.1:59000454-59000473 | MS.gene74877:CDS | 35.0% | |
| TAAATGAGCAGCATGTATCT+TGG | - | chr1.1:59000508-59000527 | MS.gene74877:CDS | 35.0% | |
| TAAGAGCCATGGTAATTCAA+TGG | + | chr1.1:59005321-59005340 | None:intergenic | 35.0% | |
| TAAGCCGCATATTGAGTATT+TGG | + | chr1.1:59001272-59001291 | None:intergenic | 35.0% | |
| TACTTAGTTGAAGTGTATGG+AGG | + | chr1.1:59004453-59004472 | None:intergenic | 35.0% | |
| TAGATCTCTTGCCATTGTTT+GGG | - | chr1.1:59003634-59003653 | MS.gene74877:intron | 35.0% | |
| TAGTACTAAGCATGTCTGTT+TGG | - | chr1.1:59001373-59001392 | MS.gene74877:intron | 35.0% | |
| TAGTTGGAACAATTCAAAGG+AGG | + | chr1.1:59001771-59001790 | None:intergenic | 35.0% | |
| TATCATGATCGATGATGACA+GGG | + | chr1.1:59003482-59003501 | None:intergenic | 35.0% | |
| TGCAAAAGATATAAGAGCCA+TGG | + | chr1.1:59005332-59005351 | None:intergenic | 35.0% | |
| TGCAAAAGATATAATAGCCG+AGG | + | chr1.1:59000810-59000829 | None:intergenic | 35.0% | |
| TGCTTGATTGTCACAAATCA+AGG | + | chr1.1:59000860-59000879 | None:intergenic | 35.0% | |
| TGGAAGGAAAGTCAGAAAAT+GGG | + | chr1.1:59000386-59000405 | None:intergenic | 35.0% | |
| TGGAGCAAATGTCAGAAAAT+GGG | + | chr1.1:59004937-59004956 | None:intergenic | 35.0% | |
| TGGTTACACGTAATGTATCT+TGG | + | chr1.1:59000680-59000699 | None:intergenic | 35.0% | |
| TGTCAACTAAATGAGTAAGG+AGG | - | chr1.1:59005086-59005105 | MS.gene74877:intron | 35.0% | |
| TGTTTGGATCCAAATGTAGA+AGG | - | chr1.1:59001389-59001408 | MS.gene74877:intron | 35.0% | |
| TTATCATGATCGATGATGAC+AGG | + | chr1.1:59003483-59003502 | None:intergenic | 35.0% | |
| TTGAAATACACACCTAGCTA+GGG | - | chr1.1:59000583-59000602 | MS.gene74877:CDS | 35.0% | |
| TTGTCTGTATCACATTCATC+TGG | + | chr1.1:59006111-59006130 | None:intergenic | 35.0% | |
| TTTGATGAATGAAGGATGTG+TGG | - | chr1.1:59002336-59002355 | MS.gene74877:intron | 35.0% | |
| ! | ACGTGTAACCATGTTTTCTT+TGG | - | chr1.1:59000689-59000708 | MS.gene74877:CDS | 35.0% |
| ! | ACTAAGCCTGAAGTATTAGA+TGG | + | chr1.1:59003052-59003071 | None:intergenic | 35.0% |
| ! | AGGAAAACTGATGATGTTCA+TGG | - | chr1.1:59004866-59004885 | MS.gene74877:intron | 35.0% |
| ! | ATTATTGATTAGGGTCCGTT+TGG | - | chr1.1:59003769-59003788 | MS.gene74877:intron | 35.0% |
| ! | CATCTTCTGTGTACTACTTT+TGG | - | chr1.1:59005745-59005764 | MS.gene74877:intron | 35.0% |
| ! | CGTGTAACCATGTTTTCTTT+GGG | - | chr1.1:59000690-59000709 | MS.gene74877:CDS | 35.0% |
| ! | GATGAATGTGATGGAGATAA+AGG | - | chr1.1:59001523-59001542 | MS.gene74877:intron | 35.0% |
| ! | GTTTGATTAGTTAACAGTGC+AGG | + | chr1.1:59001072-59001091 | None:intergenic | 35.0% |
| ! | TAATAGCCGAGGTAATTTTC+TGG | + | chr1.1:59000799-59000818 | None:intergenic | 35.0% |
| ! | TTGGGATTTTACTTGTGTCA+TGG | - | chr1.1:59000708-59000727 | MS.gene74877:CDS | 35.0% |
| ! | TTTGAAATACACACCTAGCT+AGG | - | chr1.1:59000582-59000601 | MS.gene74877:CDS | 35.0% |
| ! | TTTGAAATGAACAGTTGGCT+AGG | - | chr1.1:59005164-59005183 | MS.gene74877:CDS | 35.0% |
| ! | TTTTGTGTTCCTAATTGCTG+CGG | - | chr1.1:59004574-59004593 | MS.gene74877:intron | 35.0% |
| !! | AATTACTGTTGATGGGTTCT+AGG | - | chr1.1:59004206-59004225 | MS.gene74877:intron | 35.0% |
| !! | ATTACTGTTGATGGGTTCTA+GGG | - | chr1.1:59004207-59004226 | MS.gene74877:intron | 35.0% |
| !! | GGTTGATAAATTAACAGTGC+AGG | + | chr1.1:59005611-59005630 | None:intergenic | 35.0% |
| !! | TTTATCCCAGTTAGGTTGAT+CGG | + | chr1.1:59002503-59002522 | None:intergenic | 35.0% |
| AAATTCATAGCTACCACCTC+GGG | - | chr1.1:59004338-59004357 | MS.gene74877:intron | 40.0% | |
| AACAAACCGATCAACCTAAC+TGG | - | chr1.1:59002494-59002513 | MS.gene74877:intron | 40.0% | |
| AACCGTCCATCTAATACTTC+AGG | - | chr1.1:59003043-59003062 | MS.gene74877:CDS | 40.0% | |
| AACTTCATCCTAACACTTGC+TGG | - | chr1.1:59000607-59000626 | MS.gene74877:CDS | 40.0% | |
| AAGAGTGGTCTCTTTCTTGA+AGG | - | chr1.1:59001554-59001573 | MS.gene74877:intron | 40.0% | |
| AATAACTCCACTCAGTTACG+CGG | + | chr1.1:59003084-59003103 | None:intergenic | 40.0% | |
| ACAAACCGATCAACCTAACT+GGG | - | chr1.1:59002495-59002514 | MS.gene74877:intron | 40.0% | |
| ACAACAACTGATAACTCCAC+AGG | + | chr1.1:59001338-59001357 | None:intergenic | 40.0% | |
| ACTTCATCATTCAGGATAGC+AGG | - | chr1.1:59004834-59004853 | MS.gene74877:intron | 40.0% | |
| AGACATGCTTAGTACTACTC+TGG | + | chr1.1:59001370-59001389 | None:intergenic | 40.0% | |
| AGAGTGGTCTCTTTCTTGAA+GGG | - | chr1.1:59001555-59001574 | MS.gene74877:intron | 40.0% | |
| AGATCTCTTGCCATTGTTTG+GGG | - | chr1.1:59003635-59003654 | MS.gene74877:intron | 40.0% | |
| AGCCGCATATTGAGTATTTG+GGG | + | chr1.1:59005849-59005868 | None:intergenic | 40.0% | |
| AGCTACAGAAGAAGGATCTT+GGG | + | chr1.1:59004521-59004540 | None:intergenic | 40.0% | |
| ATGCTTGTCATGAGAAAGTG+AGG | - | chr1.1:59000902-59000921 | MS.gene74877:intron | 40.0% | |
| ATTAGAGCAGCTGATCCATT+TGG | + | chr1.1:59002541-59002560 | None:intergenic | 40.0% | |
| ATTCCATACAGCGTCAGAAT+CGG | + | chr1.1:59003361-59003380 | None:intergenic | 40.0% | |
| CAACTTGAGTGTAATGAGCA+TGG | + | chr1.1:59000353-59000372 | None:intergenic | 40.0% | |
| CACAAATGAAAGTCTGACAG+TGG | + | chr1.1:59000746-59000765 | None:intergenic | 40.0% | |
| CACAACATAAGAGTTGGAGT+TGG | + | chr1.1:59005371-59005390 | None:intergenic | 40.0% | |
| CACTGTCAGACTTTCATTTG+TGG | - | chr1.1:59000744-59000763 | MS.gene74877:intron | 40.0% | |
| CATATTGAGTATTTGGGGAC+AGG | + | chr1.1:59005844-59005863 | None:intergenic | 40.0% | |
| CTAGATCTCTTGCCATTGTT+TGG | - | chr1.1:59003633-59003652 | MS.gene74877:intron | 40.0% | |
| GAAGGAAAGTCAGAAAATGG+GGG | + | chr1.1:59000384-59000403 | None:intergenic | 40.0% | |
| GAGTTAATCAAGAGCTAACC+TGG | + | chr1.1:59003702-59003721 | None:intergenic | 40.0% | |
| GATTGTCACAAATCAAGGGT+TGG | + | chr1.1:59000855-59000874 | None:intergenic | 40.0% | |
| GGAAGGAAAGTCAGAAAATG+GGG | + | chr1.1:59000385-59000404 | None:intergenic | 40.0% | |
| GGAATCCCATTGAATTACCA+TGG | - | chr1.1:59005312-59005331 | MS.gene74877:intron | 40.0% | |
| GGAGCAAATGTCAGAAAATG+GGG | + | chr1.1:59004936-59004955 | None:intergenic | 40.0% | |
| GTCCCCAAATACTCAATATG+CGG | - | chr1.1:59005844-59005863 | MS.gene74877:intron | 40.0% | |
| GTGGAAGGAAAGTCAGAAAA+TGG | + | chr1.1:59000387-59000406 | None:intergenic | 40.0% | |
| GTGGAGCAAATGTCAGAAAA+TGG | + | chr1.1:59004938-59004957 | None:intergenic | 40.0% | |
| GTGGAGTTATCAGTTGTTGT+TGG | - | chr1.1:59001338-59001357 | MS.gene74877:intron | 40.0% | |
| GTTGACATCATAACTGATGC+AGG | + | chr1.1:59005073-59005092 | None:intergenic | 40.0% | |
| TCACTTTCTCATGACAAGCA+TGG | + | chr1.1:59000903-59000922 | None:intergenic | 40.0% | |
| TGACCCTGTGACTTAGAATT+TGG | - | chr1.1:59004419-59004438 | MS.gene74877:intron | 40.0% | |
| TGGATCCAAATGTAGAAGGT+AGG | - | chr1.1:59001393-59001412 | MS.gene74877:intron | 40.0% | |
| TGTAATGAGCATGGTAGACA+TGG | + | chr1.1:59000344-59000363 | None:intergenic | 40.0% | |
| TGTCAGACTTTCATTTGTGG+AGG | - | chr1.1:59000747-59000766 | MS.gene74877:intron | 40.0% | |
| TGTCGAGTACTTCATCATTC+AGG | - | chr1.1:59004826-59004845 | MS.gene74877:intron | 40.0% | |
| TGTCTGTTTGGATCCAAATG+TGG | - | chr1.1:59001385-59001404 | MS.gene74877:intron | 40.0% | |
| TGTTTGGATCCAAATGTGGA+AGG | - | chr1.1:59005968-59005987 | MS.gene74877:intron | 40.0% | |
| TTCAAGATGATTGATGCCCA+AGG | - | chr1.1:59001299-59001318 | MS.gene74877:intron | 40.0% | |
| TTGGAACAATTCAAAGGAGG+CGG | + | chr1.1:59001768-59001787 | None:intergenic | 40.0% | |
| ! | AAAGTCTGACAGTGGATTTC+TGG | + | chr1.1:59000738-59000757 | None:intergenic | 40.0% |
| ! | AAGTCTGACAGTGGATTTCT+GGG | + | chr1.1:59000737-59000756 | None:intergenic | 40.0% |
| ! | AATGTGATGGAGATAAAGGG+TGG | - | chr1.1:59001527-59001546 | MS.gene74877:intron | 40.0% |
| ! | AGATTTGACCCTTTTTGCAG+TGG | + | chr1.1:59002882-59002901 | None:intergenic | 40.0% |
| ! | AGCCTGAAGTATTAGATGGA+CGG | + | chr1.1:59003048-59003067 | None:intergenic | 40.0% |
| ! | AGGTGGTATTCTTTTTCCTG+AGG | - | chr1.1:59003505-59003524 | MS.gene74877:intron | 40.0% |
| ! | GAGTTATCAGTTGTTGTTGG+AGG | - | chr1.1:59001341-59001360 | MS.gene74877:intron | 40.0% |
| ! | TACATAGGCCTGATAGTGTA+AGG | + | chr1.1:59005199-59005218 | None:intergenic | 40.0% |
| !! | CATGGTCATCATTTTTGTCG+TGG | - | chr1.1:59004884-59004903 | MS.gene74877:intron | 40.0% |
| !! | CTAAGCTTGTTGATGTGTGT+TGG | - | chr1.1:59005786-59005805 | MS.gene74877:intron | 40.0% |
| !! | CTTTAAAACTCGAAAGGGTC+TGG | + | chr1.1:59002826-59002845 | None:intergenic | 40.0% |
| !! | GAGTAAGGAGGTTTTAGTCT+TGG | - | chr1.1:59005098-59005117 | MS.gene74877:intron | 40.0% |
| !! | GATTTATCAGTTGGTGTCGA+AGG | - | chr1.1:59005920-59005939 | MS.gene74877:intron | 40.0% |
| !! | GTGTGTTGGCTTGAAATTCA+TGG | - | chr1.1:59005800-59005819 | MS.gene74877:intron | 40.0% |
| !! | TCTGTGTACTACTTTTGGAC+AGG | - | chr1.1:59005750-59005769 | MS.gene74877:intron | 40.0% |
| !! | TTTATGCTTGCTGTTCACCA+GGG | + | chr1.1:59002738-59002757 | None:intergenic | 40.0% |
| !!! | ATCTTTTTTGGTAGGAGCGT+TGG | + | chr1.1:59003436-59003455 | None:intergenic | 40.0% |
| !!! | TAAGGAGGTTTTAGTCTTGG+CGG | - | chr1.1:59005101-59005120 | MS.gene74877:intron | 40.0% |
| !!! | TTTTATGCTTGCTGTTCACC+AGG | + | chr1.1:59002739-59002758 | None:intergenic | 40.0% |
| AAGACACATCAGACCCATTC+AGG | - | chr1.1:59002843-59002862 | MS.gene74877:CDS | 45.0% | |
| AAGAGAGGTCTCGTTCTTGA+AGG | - | chr1.1:59006145-59006164 | MS.gene74877:intron | 45.0% | |
| AATCCGAGTACTCTGTCATG+CGG | + | chr1.1:59006004-59006023 | None:intergenic | 45.0% | |
| AATGTGATACAGACAAGGGG+TGG | - | chr1.1:59006115-59006134 | MS.gene74877:intron | 45.0% | |
| ACACCAACTGATAAATCCGC+AGG | + | chr1.1:59005917-59005936 | None:intergenic | 45.0% | |
| AGGATGAAGTTACCCTAGCT+AGG | + | chr1.1:59000598-59000617 | None:intergenic | 45.0% | |
| AGGCTGCACAAAAGAGTAGT+AGG | - | chr1.1:59001413-59001432 | MS.gene74877:intron | 45.0% | |
| AGTTGTACGAGAGACTATGG+CGG | + | chr1.1:59003286-59003305 | None:intergenic | 45.0% | |
| AGTTTACGAGGCCACATGTA+TGG | - | chr1.1:59005221-59005240 | MS.gene74877:CDS | 45.0% | |
| ATAAAGGGTGGTTGGAAGAG+TGG | - | chr1.1:59001539-59001558 | MS.gene74877:intron | 45.0% | |
| ATGATGAGCGCTATTGGAAC+TGG | - | chr1.1:59003660-59003679 | MS.gene74877:intron | 45.0% | |
| ATGGGGGAGTTCTTCAATTC+AGG | - | chr1.1:59001482-59001501 | MS.gene74877:intron | 45.0% | |
| ATGGGGGAGTTCTTCAATTC+GGG | - | chr1.1:59001482-59001501 | MS.gene74877:intron | 45.0% | |
| ATGTCCAGTGTCCATACATG+TGG | + | chr1.1:59005235-59005254 | None:intergenic | 45.0% | |
| CAACAAGCTTAGCGACTTCA+GGG | + | chr1.1:59005778-59005797 | None:intergenic | 45.0% | |
| CAACTGATAAATCCGCAGGA+CGG | + | chr1.1:59005913-59005932 | None:intergenic | 45.0% | |
| CAACTGATAACTCCACAGGA+CGG | + | chr1.1:59001334-59001353 | None:intergenic | 45.0% | |
| CACAAATCAAGGGTTGGAGT+TGG | + | chr1.1:59000849-59000868 | None:intergenic | 45.0% | |
| CATTCACTGAGCTATGCAAC+GGG | - | chr1.1:59001612-59001631 | MS.gene74877:intron | 45.0% | |
| CTAGGTCACATTTGTGACAC+TGG | - | chr1.1:59000646-59000665 | MS.gene74877:CDS | 45.0% | |
| CTCATCATGACCCCAAACAA+TGG | + | chr1.1:59003648-59003667 | None:intergenic | 45.0% | |
| CTTGGATTTCGTTACCGTGT+TGG | + | chr1.1:59002704-59002723 | None:intergenic | 45.0% | |
| GAATAGATTGACCGCCAACA+CGG | - | chr1.1:59002687-59002706 | MS.gene74877:intron | 45.0% | |
| GACCTAGTCAGCTTCTACAT+GGG | + | chr1.1:59000633-59000652 | None:intergenic | 45.0% | |
| GAGCTACAGAAGAAGGATCT+TGG | + | chr1.1:59004522-59004541 | None:intergenic | 45.0% | |
| GATGGGGGAGTTCTTCAATT+CGG | - | chr1.1:59001481-59001500 | MS.gene74877:intron | 45.0% | |
| GCATTCACTGAGCTATGCAA+CGG | - | chr1.1:59001611-59001630 | MS.gene74877:intron | 45.0% | |
| GCCCAAGTAACACCATTAAG+CGG | - | chr1.1:59001589-59001608 | MS.gene74877:intron | 45.0% | |
| GCTACAGAAGAAGGATCTTG+GGG | + | chr1.1:59004520-59004539 | None:intergenic | 45.0% | |
| GGATTTCTATGCCTGATTCC+AGG | - | chr1.1:59003681-59003700 | MS.gene74877:intron | 45.0% | |
| GGCCTATGTAGAAGTTTACG+AGG | - | chr1.1:59005209-59005228 | MS.gene74877:CDS | 45.0% | |
| GGCCTCGTAAACTTCTACAT+AGG | + | chr1.1:59005214-59005233 | None:intergenic | 45.0% | |
| TACAGACAAGGGGTGGTAAT+TGG | - | chr1.1:59006122-59006141 | MS.gene74877:intron | 45.0% | |
| TCAACAAGCTTAGCGACTTC+AGG | + | chr1.1:59005779-59005798 | None:intergenic | 45.0% | |
| TCAAGAGCTAACCTGGAATC+AGG | + | chr1.1:59003695-59003714 | None:intergenic | 45.0% | |
| TCATCATTCAGGATAGCAGG+TGG | - | chr1.1:59004837-59004856 | MS.gene74877:intron | 45.0% | |
| TCGGAAAGTCTTGGAAACGA+CGG | + | chr1.1:59003331-59003350 | None:intergenic | 45.0% | |
| TGACCTAGTCAGCTTCTACA+TGG | + | chr1.1:59000634-59000653 | None:intergenic | 45.0% | |
| TGATGGAGATAAAGGGTGGT+TGG | - | chr1.1:59001531-59001550 | MS.gene74877:intron | 45.0% | |
| TGCAGCCTACCTTCTACATT+TGG | + | chr1.1:59001401-59001420 | None:intergenic | 45.0% | |
| TGGAGTTGTACGAGAGACTA+TGG | + | chr1.1:59003289-59003308 | None:intergenic | 45.0% | |
| TGGATCCAAATGTGGAAGGT+AGG | - | chr1.1:59005972-59005991 | MS.gene74877:intron | 45.0% | |
| TGGGTTGCGTTTGTGATAAG+TGG | + | chr1.1:59002580-59002599 | None:intergenic | 45.0% | |
| ! | AACGGGTCTTGTGTCTTGAA+TGG | - | chr1.1:59001629-59001648 | MS.gene74877:intron | 45.0% |
| ! | ATCCTTCTTCTGTAGCTCTG+CGG | - | chr1.1:59004524-59004543 | MS.gene74877:intron | 45.0% |
| ! | GACAGAGATTCAGGATTAGC+CGG | - | chr1.1:59003248-59003267 | MS.gene74877:intron | 45.0% |
| !! | AGGACGGTTCTGAAATCCTT+GGG | + | chr1.1:59001318-59001337 | None:intergenic | 45.0% |
| !! | GCCGCTTAATGGTGTTACTT+GGG | + | chr1.1:59001593-59001612 | None:intergenic | 45.0% |
| !! | GTGCGTTGGCTTGAAATTCA+CGG | - | chr1.1:59001221-59001240 | MS.gene74877:intron | 45.0% |
| !! | TGCCGCTTAATGGTGTTACT+TGG | + | chr1.1:59001594-59001613 | None:intergenic | 45.0% |
| !! | TGGGTTCTAGGGCATTCAAA+AGG | - | chr1.1:59004218-59004237 | MS.gene74877:intron | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | - | chr1.1:59005923-59005942 | MS.gene74877:intron | 45.0% |
| !! | ATATATATATATATATATAC+GGG | + | chr1.1:59005691-59005672 | None:intergenic | 5.0% |
| AACCGCAGAGCTACAGAAGA+AGG | + | chr1.1:59004529-59004548 | None:intergenic | 50.0% | |
| AATTTGGGGGTTTGAACCCG+AGG | + | chr1.1:59004357-59004376 | None:intergenic | 50.0% | |
| ACCAGGGAACTGTTGACACT+TGG | + | chr1.1:59002722-59002741 | None:intergenic | 50.0% | |
| AGGATAGCAGGTGGTCTTTG+AGG | - | chr1.1:59004846-59004865 | MS.gene74877:intron | 50.0% | |
| AGGATTTCAGAACCGTCCTG+TGG | - | chr1.1:59001319-59001338 | MS.gene74877:intron | 50.0% | |
| AGGGGTGGTAATTGGAAGAG+AGG | - | chr1.1:59006130-59006149 | MS.gene74877:intron | 50.0% | |
| AGTATTTGGGGACAGGACGA+TGG | + | chr1.1:59005837-59005856 | None:intergenic | 50.0% | |
| CAAAAGCCTCAGCGACTTCA+GGG | + | chr1.1:59001199-59001218 | None:intergenic | 50.0% | |
| CAACGTCCTAGTGTGAGAAG+AGG | - | chr1.1:59001440-59001459 | MS.gene74877:intron | 50.0% | |
| CCGTGGCCAGAAAATTACCT+CGG | - | chr1.1:59000790-59000809 | MS.gene74877:intron | 50.0% | |
| CGGAAGTTGGATGAAGAGCA+TGG | + | chr1.1:59004490-59004509 | None:intergenic | 50.0% | |
| CGTCCTGCGGATTTATCAGT+TGG | - | chr1.1:59005911-59005930 | MS.gene74877:intron | 50.0% | |
| CTCTTCATCCAACTTCCGCT+TGG | - | chr1.1:59004492-59004511 | MS.gene74877:intron | 50.0% | |
| GATATTGCCGCGTAACTGAG+TGG | - | chr1.1:59003074-59003093 | MS.gene74877:CDS | 50.0% | |
| GGATTTCGTTACCGTGTTGG+CGG | + | chr1.1:59002701-59002720 | None:intergenic | 50.0% | |
| GGGTGGTTGCAGATTGAGAT+GGG | - | chr1.1:59001464-59001483 | MS.gene74877:intron | 50.0% | |
| GGGTGGTTGGAGATTGAGAT+GGG | - | chr1.1:59006049-59006068 | MS.gene74877:intron | 50.0% | |
| GGTGGTTGCAGATTGAGATG+GGG | - | chr1.1:59001465-59001484 | MS.gene74877:intron | 50.0% | |
| GGTGGTTGGAGATTGAGATG+GGG | - | chr1.1:59006050-59006069 | MS.gene74877:intron | 50.0% | |
| GTCCTAGTGTGAGAAGAGGT+GGG | - | chr1.1:59001444-59001463 | MS.gene74877:intron | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | - | chr1.1:59006029-59006048 | MS.gene74877:intron | 50.0% | |
| GTGGTTGCAGATTGAGATGG+GGG | - | chr1.1:59001466-59001485 | MS.gene74877:intron | 50.0% | |
| GTGGTTGGAGATTGAGATGG+GGG | - | chr1.1:59006051-59006070 | MS.gene74877:intron | 50.0% | |
| TACATGGGCCAGCAAGTGTT+AGG | + | chr1.1:59000618-59000637 | None:intergenic | 50.0% | |
| TCAAAAGCCTCAGCGACTTC+AGG | + | chr1.1:59001200-59001219 | None:intergenic | 50.0% | |
| TCCAAGTGTCAACAGTTCCC+TGG | - | chr1.1:59002718-59002737 | MS.gene74877:intron | 50.0% | |
| TGGGTGGTTGCAGATTGAGA+TGG | - | chr1.1:59001463-59001482 | MS.gene74877:intron | 50.0% | |
| TGGGTGGTTGGAGATTGAGA+TGG | - | chr1.1:59006048-59006067 | MS.gene74877:intron | 50.0% | |
| ! | CTGAGGCTTTTGATGTGCGT+TGG | - | chr1.1:59001207-59001226 | MS.gene74877:intron | 50.0% |
| ! | GCTCAGTGAATGCCGCTTAA+TGG | + | chr1.1:59001604-59001623 | None:intergenic | 50.0% |
| !! | CAGGACGGTTCTGAAATCCT+TGG | + | chr1.1:59001319-59001338 | None:intergenic | 50.0% |
| !! | CCGAGGTAATTTTCTGGCCA+CGG | + | chr1.1:59000793-59000812 | None:intergenic | 50.0% |
| !! | GAGATTCAGGATTAGCCGGA+AGG | - | chr1.1:59003252-59003271 | MS.gene74877:intron | 50.0% |
| AAGGATCTTGGGGCTCCAAG+CGG | + | chr1.1:59004510-59004529 | None:intergenic | 55.0% | |
| AGTACTCTGTCATGCGGCTG+CGG | + | chr1.1:59005998-59006017 | None:intergenic | 55.0% | |
| CACCCACCTCTTCTCACACT+AGG | + | chr1.1:59001449-59001468 | None:intergenic | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | + | chr1.1:59006034-59006053 | None:intergenic | 55.0% | |
| CAGTTTCCCTGAAGTCGCTG+AGG | - | chr1.1:59001190-59001209 | MS.gene74877:intron | 55.0% | |
| CCATACAGCGTCAGAATCGG+AGG | + | chr1.1:59003358-59003377 | None:intergenic | 55.0% | |
| CCTCCGATTCTGACGCTGTA+TGG | - | chr1.1:59003355-59003374 | MS.gene74877:intron | 55.0% | |
| CGTCAGAATCGGAGGCAGAT+CGG | + | chr1.1:59003350-59003369 | None:intergenic | 55.0% | |
| CGTCCTAGTGTGAGAAGAGG+TGG | - | chr1.1:59001443-59001462 | MS.gene74877:intron | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | - | chr1.1:59006028-59006047 | MS.gene74877:intron | 55.0% | |
| CTAGTGTGAGAAGAGGTGGG+TGG | - | chr1.1:59001447-59001466 | MS.gene74877:intron | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | - | chr1.1:59006032-59006051 | MS.gene74877:intron | 55.0% | |
| GAGGCCACATGTATGGACAC+TGG | - | chr1.1:59005228-59005247 | MS.gene74877:CDS | 55.0% | |
| GCATCTTTCCTTAGCAGCCG+TGG | - | chr1.1:59000773-59000792 | MS.gene74877:intron | 55.0% | |
| GGAGGCAGATCGGAAAGTCT+TGG | + | chr1.1:59003340-59003359 | None:intergenic | 55.0% | |
| GGCCCATGTAGAAGCTGACT+AGG | - | chr1.1:59000628-59000647 | MS.gene74877:CDS | 55.0% | |
| GGGATTTCTGAACCGTCCTG+CGG | - | chr1.1:59005898-59005917 | MS.gene74877:intron | 55.0% | |
| GGGGTCATGATGAGCGCTAT+TGG | - | chr1.1:59003654-59003673 | MS.gene74877:intron | 55.0% | |
| GTTCGGTTGCCGCAGCAATT+AGG | + | chr1.1:59004586-59004605 | None:intergenic | 55.0% | |
| TGCGGCCTACCTTCCACATT+TGG | + | chr1.1:59005980-59005999 | None:intergenic | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | - | chr1.1:59006036-59006055 | MS.gene74877:intron | 55.0% | |
| ! | CAGCCGCATGACAGAGTACT+CGG | - | chr1.1:59005998-59006017 | MS.gene74877:intron | 55.0% |
| !! | GTAGGAGCGTTGGCGAGTAA+AGG | + | chr1.1:59003426-59003445 | None:intergenic | 55.0% |
| !! | TTTTCTGGCCACGGCTGCTA+AGG | + | chr1.1:59000784-59000803 | None:intergenic | 55.0% |
| ATGGCGGCGATGCATCCTTC+CGG | + | chr1.1:59003270-59003289 | None:intergenic | 60.0% | |
| CGTACAACTCCACTCGACGC+CGG | - | chr1.1:59003297-59003316 | MS.gene74877:intron | 60.0% | |
| GGAAACGACGGAGAGTCTGC+CGG | + | chr1.1:59003319-59003338 | None:intergenic | 60.0% | |
| TTGGGGCTCCAAGCGGAAGT+TGG | + | chr1.1:59004503-59004522 | None:intergenic | 60.0% | |
| TTGGGGGTTTGAACCCGAGG+TGG | + | chr1.1:59004354-59004373 | None:intergenic | 60.0% | |
| AACCCAGCGAACCCGCGTAC+GGG | - | chr1.1:59002594-59002613 | MS.gene74877:intron | 65.0% | |
| CAACCCAGCGAACCCGCGTA+CGG | - | chr1.1:59002593-59002612 | MS.gene74877:intron | 65.0% | |
| ! | TCTGGTTTCGCGCCCGTACG+CGG | + | chr1.1:59002609-59002628 | None:intergenic | 65.0% |
| CTGGTTTCGCGCCCGTACGC+GGG | + | chr1.1:59002608-59002627 | None:intergenic | 70.0% | |
| ! | GAGAGTCTGCCGGCGTCGAG+TGG | + | chr1.1:59003309-59003328 | None:intergenic | 70.0% |
| CGCCCGTACGCGGGTTCGCT+GGG | + | chr1.1:59002599-59002618 | None:intergenic | 75.0% | |
| ! | GCGCCCGTACGCGGGTTCGC+TGG | + | chr1.1:59002600-59002619 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 59000325 | 59006198 | 59000325 | ID=MS.gene74877 |
| chr1.1 | mRNA | 59000325 | 59006198 | 59000325 | ID=MS.gene74877.t1;Parent=MS.gene74877 |
| chr1.1 | exon | 59006155 | 59006198 | 59006155 | ID=MS.gene74877.t1.exon1;Parent=MS.gene74877.t1 |
| chr1.1 | CDS | 59006155 | 59006198 | 59006155 | ID=cds.MS.gene74877.t1;Parent=MS.gene74877.t1 |
| chr1.1 | exon | 59005113 | 59005330 | 59005113 | ID=MS.gene74877.t1.exon2;Parent=MS.gene74877.t1 |
| chr1.1 | CDS | 59005113 | 59005330 | 59005113 | ID=cds.MS.gene74877.t1;Parent=MS.gene74877.t1 |
| chr1.1 | exon | 59003017 | 59003231 | 59003017 | ID=MS.gene74877.t1.exon3;Parent=MS.gene74877.t1 |
| chr1.1 | CDS | 59003017 | 59003231 | 59003017 | ID=cds.MS.gene74877.t1;Parent=MS.gene74877.t1 |
| chr1.1 | exon | 59002821 | 59002939 | 59002821 | ID=MS.gene74877.t1.exon4;Parent=MS.gene74877.t1 |
| chr1.1 | CDS | 59002821 | 59002939 | 59002821 | ID=cds.MS.gene74877.t1;Parent=MS.gene74877.t1 |
| chr1.1 | exon | 59000325 | 59000751 | 59000325 | ID=MS.gene74877.t1.exon5;Parent=MS.gene74877.t1 |
| chr1.1 | CDS | 59000325 | 59000751 | 59000325 | ID=cds.MS.gene74877.t1;Parent=MS.gene74877.t1 |
| Gene Sequence |
| Protein sequence |