AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07572

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07572.t1 MTR_1g079260 93.455 275 17 1 1 274 1 275 0.0 535
MS.gene07572.t1 MTR_1g100597 72.464 276 73 2 1 274 1 275 3.22e-141 398
MS.gene07572.t1 MTR_1g079370 70.956 272 71 3 1 271 1 265 3.24e-141 397
MS.gene07572.t1 MTR_1g079180 70.909 275 66 6 1 271 1 265 6.74e-133 377
MS.gene07572.t1 MTR_1g079250 69.751 281 78 4 1 274 1 281 2.39e-131 374
MS.gene07572.t1 MTR_1g079460 69.928 276 70 3 1 272 1 267 5.03e-131 372
MS.gene07572.t1 MTR_1g079380 72.794 272 66 3 1 271 1 265 1.41e-130 372
MS.gene07572.t1 MTR_1g026510 64.685 286 89 5 1 274 1 286 4.79e-128 365
MS.gene07572.t1 MTR_1g079200 67.518 274 76 5 1 271 1 264 2.27e-124 355
MS.gene07572.t1 MTR_1g079850 64.561 285 89 5 1 274 1 284 4.93e-121 347
MS.gene07572.t1 MTR_1g079230 63.899 277 96 4 1 274 1 276 4.19e-116 334
MS.gene07572.t1 MTR_1g100613 68.571 245 70 3 16 254 1 244 1.82e-113 327
MS.gene07572.t1 MTR_3g006850 59.344 305 91 8 2 274 15 318 7.69e-106 310
MS.gene07572.t1 MTR_3g452600 61.852 270 89 7 4 271 10 267 2.49e-102 299
MS.gene07572.t1 MTR_1g079410 57.554 278 102 6 2 272 6 274 3.83e-100 294
MS.gene07572.t1 MTR_1g079140 52.881 295 111 7 4 271 13 306 4.55e-97 287
MS.gene07572.t1 MTR_1g079350 55.197 279 113 6 1 271 1 275 1.19e-92 275
MS.gene07572.t1 MTR_3g450990 55.944 286 96 9 4 271 10 283 1.05e-89 268
MS.gene07572.t1 MTR_2g079100 57.249 269 97 6 3 268 8 261 4.46e-88 263
MS.gene07572.t1 MTR_1g079400 50.526 285 111 5 2 271 10 279 2.33e-87 261
MS.gene07572.t1 MTR_7g112550 47.535 284 130 7 2 271 5 283 4.60e-79 241
MS.gene07572.t1 MTR_7g096300 57.692 260 83 8 1 251 1 242 1.85e-78 252
MS.gene07572.t1 MTR_1g079340 50.676 296 111 10 1 271 40 325 8.84e-76 234
MS.gene07572.t1 MTR_1g083580 43.929 280 139 7 4 271 8 281 6.51e-72 222
MS.gene07572.t1 MTR_1g078470 62.222 180 57 3 92 271 16 184 2.00e-71 218
MS.gene07572.t1 MTR_7g112560 42.279 272 138 7 4 271 1 257 5.35e-63 199
MS.gene07572.t1 MTR_1g079130 51.852 189 73 6 101 271 1 189 2.67e-53 172
MS.gene07572.t1 MTR_1g079240 51.351 185 73 3 87 271 12 179 5.34e-53 171
MS.gene07572.t1 MTR_4g023570 38.971 272 127 8 4 271 1 237 1.69e-52 171
MS.gene07572.t1 MTR_1g076870 63.043 138 33 4 128 251 2 135 3.95e-48 157
MS.gene07572.t1 MTR_1g079350 56.051 157 61 3 1 152 1 154 6.41e-48 159
MS.gene07572.t1 MTR_2g042540 64.762 105 35 2 1 103 1 105 1.23e-35 124
MS.gene07572.t1 MTR_1g078460 71.264 87 25 0 1 87 64 150 9.28e-35 123
MS.gene07572.t1 MTR_1g079210 57.258 124 45 3 129 245 7 129 4.64e-33 118
MS.gene07572.t1 MTR_7g096310 50.676 148 65 3 40 185 21 162 8.83e-33 118
MS.gene07572.t1 MTR_3g058640 53.211 109 42 2 128 236 7 106 3.74e-27 102
MS.gene07572.t1 MTR_4g083970 29.515 227 126 8 52 271 91 290 4.94e-26 103
MS.gene07572.t1 MTR_7g103380 26.502 283 174 6 6 272 21 285 1.12e-25 103
MS.gene07572.t1 MTR_0113s0040 24.825 286 172 5 2 272 20 277 1.21e-24 100
MS.gene07572.t1 MTR_1g101390 29.185 233 149 4 2 219 26 257 1.41e-24 100
MS.gene07572.t1 MTR_5g010800 35.374 147 86 5 6 147 19 161 7.61e-21 89.7
MS.gene07572.t1 MTR_0002s0020 27.962 211 132 3 6 197 24 233 4.63e-20 87.8
MS.gene07572.t1 MTR_4g102770 25.532 282 168 4 6 272 21 275 3.11e-19 85.5
MS.gene07572.t1 MTR_1g079220 55.405 74 24 2 165 238 1 65 1.42e-18 78.6
MS.gene07572.t1 MTR_1g079390 72.000 50 13 1 217 266 7 55 1.95e-18 77.4
MS.gene07572.t1 MTR_1g079840 42.400 125 22 2 142 266 20 94 4.41e-16 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07572.t1 AT2G02250 45.725 269 132 4 4 270 47 303 3.66e-78 239
MS.gene07572.t1 AT2G02240 44.526 274 139 3 2 274 59 320 6.99e-76 234
MS.gene07572.t1 AT2G02360 42.491 273 137 5 2 270 12 268 2.21e-75 231
MS.gene07572.t1 AT2G02230 41.234 308 141 7 4 274 32 336 3.72e-75 233
MS.gene07572.t1 AT1G80110 46.617 266 126 5 7 270 4 255 2.96e-72 223
MS.gene07572.t1 AT2G02340 42.500 280 140 6 1 270 33 301 1.11e-71 223
MS.gene07572.t1 AT1G09155 43.369 279 143 6 7 271 3 280 4.08e-69 216
MS.gene07572.t1 AT1G56250 43.369 279 143 6 7 271 4 281 4.56e-63 200
MS.gene07572.t1 AT1G56240 43.165 278 143 6 7 270 4 280 6.41e-63 199
MS.gene07572.t1 AT2G02350 38.686 274 150 7 2 270 22 282 7.78e-56 182
MS.gene07572.t1 AT2G02310 36.364 275 159 5 2 272 43 305 2.06e-54 178
MS.gene07572.t1 AT2G02320 39.493 276 137 9 6 270 42 298 8.39e-53 174
MS.gene07572.t1 AT2G02300 37.500 280 137 10 2 272 32 282 9.78e-47 158
MS.gene07572.t1 AT5G24560 51.773 141 65 2 4 144 3 140 2.06e-44 149
MS.gene07572.t1 AT5G24560 59.184 49 20 0 224 272 145 193 1.01e-14 71.2
MS.gene07572.t1 AT3G53000 27.972 286 167 9 6 273 23 287 6.66e-28 109
MS.gene07572.t1 AT2G02350 34.286 175 100 5 101 270 1 165 1.51e-24 97.4
MS.gene07572.t1 AT4G19850 29.787 188 98 5 92 271 15 176 2.85e-21 88.6
MS.gene07572.t1 AT4G19850 29.787 188 98 5 92 271 57 218 3.79e-21 89.4
MS.gene07572.t1 AT1G12710 27.556 225 144 5 6 214 30 251 1.11e-19 86.7
MS.gene07572.t1 AT3G61060 25.177 282 169 10 6 272 27 281 6.75e-19 84.7
MS.gene07572.t1 AT1G33920 28.729 181 99 5 96 271 9 164 8.74e-19 81.6
MS.gene07572.t1 AT5G52120 27.273 209 129 4 1 188 18 224 5.70e-18 82.0
MS.gene07572.t1 AT3G61060 24.468 282 172 9 6 272 27 282 1.00e-17 81.3
MS.gene07572.t1 AT1G63090 27.602 221 139 6 6 209 28 244 1.46e-17 80.9
MS.gene07572.t1 AT4G19840 30.270 185 98 8 92 272 89 246 5.13e-17 78.6
MS.gene07572.t1 AT4G19850 29.605 152 75 4 92 237 57 182 2.94e-13 67.8
MS.gene07572.t1 AT1G12710 28.481 158 107 3 6 160 30 184 1.45e-12 67.0

Find 72 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGACTTCTTCATCTTCT+AGG 0.172241 1.2:-62100386 None:intergenic
TAAGTTACGTACAGAGTATT+TGG 0.193175 1.2:-62100126 None:intergenic
CTAGATCTCTTGCCATTACT+TGG 0.259697 1.2:+62096288 MS.gene07572:CDS
CATCATCGACAATGGTAAAA+AGG 0.276610 1.2:+62096107 MS.gene07572:CDS
CGGCCGATTCCGACGCTGTT+TGG 0.287452 1.2:+62095977 MS.gene07572:CDS
TTAAGAGCAAACCTGGATTC+AGG 0.296897 1.2:-62096347 None:intergenic
AATGAGTGTTATTGATATAA+AGG 0.301571 1.2:+62100407 MS.gene07572:CDS
TTACCATTGTCGATGATGAT+AGG 0.322166 1.2:-62096102 None:intergenic
AGCCAACATTCCTGCCAAAA+AGG 0.323343 1.2:+62096053 MS.gene07572:CDS
TTATATCAATAACACTCATT+TGG 0.327990 1.2:-62100404 None:intergenic
CTGAACTTCTTCATGTGTGT+TGG 0.371115 1.2:+62100064 MS.gene07572:CDS
GACAGCCTTTGAAGAATTAC+CGG 0.371280 1.2:+62095870 MS.gene07572:CDS
TAGCAGTCCAGTTCCAATAT+TGG 0.371863 1.2:-62096322 None:intergenic
AAGTTACGTACAGAGTATTT+GGG 0.374400 1.2:-62100125 None:intergenic
TGAAGAAGTTCAGCAACTTC+AGG 0.399127 1.2:-62100054 None:intergenic
TTGTTGAAGGAATAGAAGTT+AGG 0.404080 1.2:+62100454 MS.gene07572:CDS
GTTGCTTAATGGTCTTCCTT+AGG 0.404567 1.2:-62100477 None:intergenic
GGGGTGACACTGACCAATAT+TGG 0.414125 1.2:+62096309 MS.gene07572:CDS
CAGCCATCGCTTCTAACATT+AGG 0.421791 1.2:-62100330 None:intergenic
TTGATATAAAGGGTGGTCAT+TGG 0.423881 1.2:+62100418 MS.gene07572:CDS
AAGAGAGGTTTCTTTGTTGA+AGG 0.432696 1.2:+62100441 MS.gene07572:CDS
TTTCAATTGGAGAGAAAGAG+TGG 0.437567 1.2:+62096242 MS.gene07572:CDS
ACACTGACCAATATTGGAAC+TGG 0.437942 1.2:+62096315 MS.gene07572:CDS
TAGATCTCTTGCCATTACTT+GGG 0.440419 1.2:+62096289 MS.gene07572:CDS
TGCAATCTTAATACTCTGTT+GGG 0.448837 1.2:-62100303 None:intergenic
TTGCAATCTTAATACTCTGT+TGG 0.450777 1.2:-62100304 None:intergenic
CGGTGCCTACGTCTCGCGTT+TGG 0.458821 1.2:-62100258 None:intergenic
ATGAGTGTTATTGATATAAA+GGG 0.461847 1.2:+62100408 MS.gene07572:CDS
ATTCCAAACAGCGTCGGAAT+CGG 0.465611 1.2:-62095980 None:intergenic
CACTAAAATTGTCTGTTTAG+CGG 0.473911 1.2:+62100233 MS.gene07572:CDS
ATTGCCGCGATGCAACCTTC+CGG 0.476904 1.2:-62095889 None:intergenic
TACCATTGTCGATGATGATA+GGG 0.481342 1.2:-62096101 None:intergenic
GAGATGGGAGAGTTCTTCTC+AGG 0.483764 1.2:+62100363 MS.gene07572:CDS
ATGATAGATGAGATATCAGA+AGG 0.493286 1.2:-62096012 None:intergenic
GAGTATTTGGGGACAAGGCA+AGG 0.505989 1.2:-62100113 None:intergenic
CGTCCTAATGTTAGAAGCGA+TGG 0.506737 1.2:+62100327 MS.gene07572:CDS
AAGGGTGGTCATTGGAAGAG+AGG 0.516527 1.2:+62100426 MS.gene07572:CDS
AGGAATAGAAGTTAGGCCTA+AGG 0.529851 1.2:+62100461 MS.gene07572:CDS
AGATCTCTTGCCATTACTTG+GGG 0.535874 1.2:+62096290 MS.gene07572:CDS
GGACTGCTATGCCTGAATCC+AGG 0.538247 1.2:+62096336 MS.gene07572:CDS
TTCAAGATGATCAATGCCTA+TGG 0.539201 1.2:+62100156 MS.gene07572:CDS
TGATAGATGAGATATCAGAA+GGG 0.545185 1.2:-62096011 None:intergenic
GTCAGTGTCACCCCAAGTAA+TGG 0.546460 1.2:-62096300 None:intergenic
ACCTTCCGGTAATTCTTCAA+AGG 0.547313 1.2:-62095875 None:intergenic
GCAGGAATGTTGGCTAGGGA+AGG 0.549550 1.2:-62096045 None:intergenic
GAGAGTCTGCCAGCGTCGAG+TGG 0.557616 1.2:-62095928 None:intergenic
CCGTAGCAGAATTATAGTTA+CGG 0.558146 1.2:+62100278 MS.gene07572:CDS
TTTGGCAGGAATGTTGGCTA+GGG 0.561559 1.2:-62096049 None:intergenic
TGTTAGAAGCGATGGCTGGT+TGG 0.561669 1.2:+62100335 MS.gene07572:CDS
GTGTGTTGGCTTGAAATTCG+TGG 0.568809 1.2:+62100078 MS.gene07572:CDS
AAGAAAATTCTTAGAAACGA+GGG 0.571835 1.2:-62095950 None:intergenic
CTAATGTTAGAAGCGATGGC+TGG 0.579392 1.2:+62100331 MS.gene07572:CDS
CGCCCTATCATCATCGACAA+TGG 0.582859 1.2:+62096099 MS.gene07572:CDS
GGCTGGTTGGAGATTGAGAT+GGG 0.584901 1.2:+62100348 MS.gene07572:CDS
GCCTTTGAAGAATTACCGGA+AGG 0.593951 1.2:+62095874 MS.gene07572:CDS
ATATCAACTGATAACTCCAC+AGG 0.597089 1.2:-62100192 None:intergenic
TGGCTGGTTGGAGATTGAGA+TGG 0.597171 1.2:+62100347 MS.gene07572:CDS
TGTGTTGGCTTGAAATTCGT+GGG 0.601350 1.2:+62100079 MS.gene07572:CDS
AGTATTTGGGGACAAGGCAA+GGG 0.607982 1.2:-62100112 None:intergenic
CCGTAACTATAATTCTGCTA+CGG 0.609178 1.2:-62100278 None:intergenic
AGTGTTATTGATATAAAGGG+TGG 0.610510 1.2:+62100411 MS.gene07572:CDS
AGGATAGTACTCAAATCCAT+AGG 0.611119 1.2:-62100172 None:intergenic
AGTACAACTCCACTCGACGC+TGG 0.620670 1.2:+62095919 MS.gene07572:CDS
TGGATTTGAGTACTATCCTG+TGG 0.623491 1.2:+62100176 MS.gene07572:CDS
CGGATCCAAACGCGAGACGT+AGG 0.638605 1.2:+62100253 MS.gene07572:CDS
GTACAGAGTATTTGGGGACA+AGG 0.644660 1.2:-62100118 None:intergenic
GAGTTATCAGTTGATATCAA+AGG 0.645051 1.2:+62100198 MS.gene07572:CDS
AAAGCGATTCCAAACAGCGT+CGG 0.655239 1.2:-62095986 None:intergenic
TTATCAGTTGATATCAAAGG+TGG 0.662875 1.2:+62100201 MS.gene07572:CDS
AGTTACGTACAGAGTATTTG+GGG 0.668148 1.2:-62100124 None:intergenic
AAAGAAAATTCTTAGAAACG+AGG 0.688137 1.2:-62095951 None:intergenic
ATTACCGGAAGGTTGCATCG+CGG 0.779652 1.2:+62095885 MS.gene07572:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTTTTATTAAATGTA+AGG + chr1.2:62097393-62097412 MS.gene07572:intron 10.0%
!!! ATTAAGCATTGAAAAAAAAT+AGG - chr1.2:62098026-62098045 None:intergenic 15.0%
!!! ATTTTTATAAATGTTATCCA+TGG + chr1.2:62097565-62097584 MS.gene07572:intron 15.0%
!!! CTAAAATATCTAAAACTATT+GGG - chr1.2:62099838-62099857 None:intergenic 15.0%
!!! TATTCCATTATTTTTACTAT+GGG + chr1.2:62098136-62098155 MS.gene07572:intron 15.0%
!!! TCTAAAATATCTAAAACTAT+TGG - chr1.2:62099839-62099858 None:intergenic 15.0%
!! AAAAAACTCATAGTTATAGA+TGG - chr1.2:62098841-62098860 None:intergenic 20.0%
!! AAAAACTCATAGTTATAGAT+GGG - chr1.2:62098840-62098859 None:intergenic 20.0%
!! AAAATCAGAAAAAAGAAAGT+TGG - chr1.2:62098366-62098385 None:intergenic 20.0%
!! AAATGAAATTCTATGTTGTT+TGG - chr1.2:62098428-62098447 None:intergenic 20.0%
!! ATATCATAAATTGTGATGTT+TGG + chr1.2:62098487-62098506 MS.gene07572:intron 20.0%
!! ATATCCATGGATAAAATAAA+CGG + chr1.2:62097106-62097125 MS.gene07572:intron 20.0%
!! GATAAACTTCTAAGTTATAT+TGG - chr1.2:62099906-62099925 None:intergenic 20.0%
!! GTAAAATCACAAAGAAAAAA+TGG - chr1.2:62099435-62099454 None:intergenic 20.0%
!! TAGCTAAAATTTAGAAACAA+AGG - chr1.2:62097518-62097537 None:intergenic 20.0%
!! TATCATAAATTGTGATGTTT+GGG + chr1.2:62098488-62098507 MS.gene07572:intron 20.0%
!! TTAAACAATTTAGTCATACT+TGG + chr1.2:62099942-62099961 MS.gene07572:intron 20.0%
!! TTATATCAATAACACTCATT+TGG - chr1.2:62100407-62100426 None:intergenic 20.0%
!! TTTCTCGAATATTATTGAAT+TGG + chr1.2:62096152-62096171 MS.gene07572:intron 20.0%
!!! AAAGACCATTTTAAATTTCA+AGG + chr1.2:62098985-62099004 MS.gene07572:intron 20.0%
!!! AAGACCATTTTAAATTTCAA+GGG + chr1.2:62098986-62099005 MS.gene07572:intron 20.0%
!!! AATGAGTGTTATTGATATAA+AGG + chr1.2:62100407-62100426 MS.gene07572:CDS 20.0%
!!! ATACATACAGACTTATTTTT+TGG - chr1.2:62099255-62099274 None:intergenic 20.0%
!!! ATGAGTGTTATTGATATAAA+GGG + chr1.2:62100408-62100427 MS.gene07572:CDS 20.0%
!!! ATTCCATTATTTTTACTATG+GGG + chr1.2:62098137-62098156 MS.gene07572:intron 20.0%
!!! CATAGTAAAAATAATGGAAT+AGG - chr1.2:62098137-62098156 None:intergenic 20.0%
!!! CTATTCCATTATTTTTACTA+TGG + chr1.2:62098135-62098154 MS.gene07572:intron 20.0%
!!! CTTTTTTCTGATTTTAATTG+TGG + chr1.2:62098371-62098390 MS.gene07572:intron 20.0%
!!! TAACAATTATGAAAAAGCAT+AGG - chr1.2:62098880-62098899 None:intergenic 20.0%
!!! TACATACAGACTTATTTTTT+GGG - chr1.2:62099254-62099273 None:intergenic 20.0%
! AAAGAAAATTCTTAGAAACG+AGG - chr1.2:62095954-62095973 None:intergenic 25.0%
! AAGAAAATTCTTAGAAACGA+GGG - chr1.2:62095953-62095972 None:intergenic 25.0%
! ACATCCCTTGAAATTTAAAA+TGG - chr1.2:62098993-62099012 None:intergenic 25.0%
! ATAATTGTTAGATACGTTCT+CGG + chr1.2:62098890-62098909 MS.gene07572:intron 25.0%
! ATCATAAATTGTGATGTTTG+GGG + chr1.2:62098489-62098508 MS.gene07572:intron 25.0%
! CGGATTTCATATTTATCTAA+CGG + chr1.2:62097668-62097687 MS.gene07572:intron 25.0%
! GAAAATAGTTTACAAAAGAG+AGG + chr1.2:62096512-62096531 MS.gene07572:intron 25.0%
! GAATCCAAAATCTAATGATT+TGG - chr1.2:62097990-62098009 None:intergenic 25.0%
! GATATGTTAATAGATATCCA+TGG + chr1.2:62097093-62097112 MS.gene07572:intron 25.0%
! GCATTGAAAAAAAATAGGAT+TGG - chr1.2:62098021-62098040 None:intergenic 25.0%
! TAATTTACTCCGTTTAATAG+CGG - chr1.2:62097205-62097224 None:intergenic 25.0%
! TAATTTGGCAGTTCTTAAAT+GGG - chr1.2:62098793-62098812 None:intergenic 25.0%
! TCTCATGTTGAAAAGAAATA+AGG + chr1.2:62096486-62096505 MS.gene07572:intron 25.0%
! TGCCTTTCAAATATCAAAAA+GGG - chr1.2:62099293-62099312 None:intergenic 25.0%
! TTAACAAGTATTCACTTAGA+AGG - chr1.2:62099081-62099100 None:intergenic 25.0%
!! ATTATTGAATTGGTCAGTTT+TGG + chr1.2:62096162-62096181 MS.gene07572:intron 25.0%
!! GCTAATGGACATATATAATT+AGG - chr1.2:62098398-62098417 None:intergenic 25.0%
!! TATTATTGGCTAGCAAAAAA+GGG + chr1.2:62098931-62098950 MS.gene07572:intron 25.0%
!! TGAAATGTAGAGTTTTCAAT+TGG + chr1.2:62096229-62096248 MS.gene07572:intron 25.0%
!! TGATCCAAATCATTAGATTT+TGG + chr1.2:62097983-62098002 MS.gene07572:intron 25.0%
!! TTATTATTGGCTAGCAAAAA+AGG + chr1.2:62098930-62098949 MS.gene07572:intron 25.0%
!! TTTGTGATTTTACTTTGTCA+TGG + chr1.2:62099442-62099461 MS.gene07572:intron 25.0%
!!! AAATCCGTTTATTTTATCCA+TGG - chr1.2:62097113-62097132 None:intergenic 25.0%
!!! GATTTTGAAACACTTATCTA+TGG - chr1.2:62096998-62097017 None:intergenic 25.0%
!!! TTCTAAGAATTTTCTTTCTG+CGG + chr1.2:62095957-62095976 MS.gene07572:CDS 25.0%
AAAAGAAACTGTACAGATGA+AGG - chr1.2:62097961-62097980 None:intergenic 30.0%
AAGCAATATAGACAACTACT+TGG - chr1.2:62099607-62099626 None:intergenic 30.0%
AATGCCAATATCTCTTGAAT+CGG + chr1.2:62098584-62098603 MS.gene07572:intron 30.0%
AATTTACTCCGTTTAATAGC+GGG - chr1.2:62097204-62097223 None:intergenic 30.0%
ACAGAAACATCATCACAAAA+TGG - chr1.2:62098239-62098258 None:intergenic 30.0%
ACCACCAAAAGTTGAAAATA+TGG - chr1.2:62096898-62096917 None:intergenic 30.0%
AGAAAATTTAAGAGCAAACC+TGG - chr1.2:62096357-62096376 None:intergenic 30.0%
AGAAACATCATCACAAAATG+GGG - chr1.2:62098237-62098256 None:intergenic 30.0%
AGACCCCATAGTAAAAATAA+TGG - chr1.2:62098143-62098162 None:intergenic 30.0%
AGTTATTACCCTCCTTTAAA+AGG + chr1.2:62097288-62097307 MS.gene07572:intron 30.0%
AGTTGCAAAGATAAGAATAC+AGG - chr1.2:62100008-62100027 None:intergenic 30.0%
ATATTCGAGAAATCAGTAGT+TGG - chr1.2:62096144-62096163 None:intergenic 30.0%
ATCAGTTTGAACTTGATTGA+AGG - chr1.2:62098084-62098103 None:intergenic 30.0%
ATCGAAAATACAACTTGGAA+TGG + chr1.2:62097909-62097928 MS.gene07572:intron 30.0%
ATGATAGATGAGATATCAGA+AGG - chr1.2:62096015-62096034 None:intergenic 30.0%
CACTAAAATTGTCTGTTTAG+CGG + chr1.2:62100233-62100252 MS.gene07572:CDS 30.0%
CAGAAACATCATCACAAAAT+GGG - chr1.2:62098238-62098257 None:intergenic 30.0%
CTAATTTGGCAGTTCTTAAA+TGG - chr1.2:62098794-62098813 None:intergenic 30.0%
GAAAAAATGGTAACATGTAG+CGG - chr1.2:62099422-62099441 None:intergenic 30.0%
GACTACATGATAAAAGATCT+AGG - chr1.2:62097939-62097958 None:intergenic 30.0%
GATTCTATTTCCTATGTTAG+TGG + chr1.2:62096820-62096839 MS.gene07572:intron 30.0%
GCCTTTCAAATATCAAAAAG+GGG - chr1.2:62099292-62099311 None:intergenic 30.0%
GTGCCTTTCAAATATCAAAA+AGG - chr1.2:62099294-62099313 None:intergenic 30.0%
TAAGAATACAGGAACAATGT+AGG - chr1.2:62099997-62100016 None:intergenic 30.0%
TAGGAAGTTGAATGATATTG+AGG - chr1.2:62097237-62097256 None:intergenic 30.0%
TAGGCTCATCAACTAAAATT+TGG - chr1.2:62099978-62099997 None:intergenic 30.0%
TATTCATACCCGCTATTAAA+CGG + chr1.2:62097193-62097212 MS.gene07572:intron 30.0%
TATTCGAGAAATCAGTAGTT+GGG - chr1.2:62096143-62096162 None:intergenic 30.0%
TGATAGATGAGATATCAGAA+GGG - chr1.2:62096014-62096033 None:intergenic 30.0%
TGCAATCTTAATACTCTGTT+GGG - chr1.2:62100306-62100325 None:intergenic 30.0%
TTAAGAATGCTAATTAGCGT+TGG + chr1.2:62096201-62096220 MS.gene07572:intron 30.0%
TTAGGATACAGAAGCTAATT+TGG - chr1.2:62098808-62098827 None:intergenic 30.0%
TTCACTTAGAAGGAAATATG+AGG - chr1.2:62099071-62099090 None:intergenic 30.0%
TTCATATTTATCTAACGGAG+CGG + chr1.2:62097673-62097692 MS.gene07572:intron 30.0%
TTCTATCCACAATTATCATG+AGG + chr1.2:62099625-62099644 MS.gene07572:intron 30.0%
TTGCAATCTTAATACTCTGT+TGG - chr1.2:62100307-62100326 None:intergenic 30.0%
TTGTTGAAGGAATAGAAGTT+AGG + chr1.2:62100454-62100473 MS.gene07572:CDS 30.0%
TTTAACTACCCGCTAATTAA+TGG + chr1.2:62097133-62097152 MS.gene07572:intron 30.0%
! AAGTTACGTACAGAGTATTT+GGG - chr1.2:62100128-62100147 None:intergenic 30.0%
! AGTGTTATTGATATAAAGGG+TGG + chr1.2:62100411-62100430 MS.gene07572:CDS 30.0%
! CAACTTTTGTGCACATATTT+TGG + chr1.2:62100023-62100042 MS.gene07572:intron 30.0%
! GAGTTATCAGTTGATATCAA+AGG + chr1.2:62100198-62100217 MS.gene07572:CDS 30.0%
! TAAAGTATCATAATGCACAC+AGG + chr1.2:62098273-62098292 MS.gene07572:intron 30.0%
! TAAGTTACGTACAGAGTATT+TGG - chr1.2:62100129-62100148 None:intergenic 30.0%
! TCATGAACCTAAGCAATTTT+AGG + chr1.2:62096748-62096767 MS.gene07572:intron 30.0%
! TCCCCTTTTTGATATTTGAA+AGG + chr1.2:62099288-62099307 MS.gene07572:intron 30.0%
! TCGTGAAATTTTGTCCAATA+TGG + chr1.2:62099784-62099803 MS.gene07572:intron 30.0%
! TTATCAGTTGATATCAAAGG+TGG + chr1.2:62100201-62100220 MS.gene07572:CDS 30.0%
!! ATTTGGGTATTTTTACCAGA+AGG - chr1.2:62097757-62097776 None:intergenic 30.0%
!! TTTCACTTCCTTTTAAAGGA+GGG - chr1.2:62097299-62097318 None:intergenic 30.0%
!! TTTGGGTATTTTTACCAGAA+GGG - chr1.2:62097756-62097775 None:intergenic 30.0%
!!! AGACAATTTTAGTGCTACTT+TGG - chr1.2:62100227-62100246 None:intergenic 30.0%
!!! TTTTTTTAAATCATGCCCAC+TGG - chr1.2:62096593-62096612 None:intergenic 30.0%
AAAAGGAAGTGAAAGTGGTT+GGG + chr1.2:62097305-62097324 MS.gene07572:intron 35.0%
AACAACAAGCTTAGTAAGTG+AGG - chr1.2:62096542-62096561 None:intergenic 35.0%
AAGAGAGCCTAAAATTGCTT+AGG - chr1.2:62096758-62096777 None:intergenic 35.0%
AAGAGAGGTTTCTTTGTTGA+AGG + chr1.2:62100441-62100460 MS.gene07572:CDS 35.0%
ACAACAAGCTTAGTAAGTGA+GGG - chr1.2:62096541-62096560 None:intergenic 35.0%
ACAATTATCATGAGGCAATG+AGG + chr1.2:62099633-62099652 MS.gene07572:intron 35.0%
ACCAATAAATCTACTGTCAG+TGG + chr1.2:62099467-62099486 MS.gene07572:intron 35.0%
ACTCATAGTTATAGATGGGT+TGG - chr1.2:62098836-62098855 None:intergenic 35.0%
ACTTCATGTGCTTGAGATTT+GGG - chr1.2:62097773-62097792 None:intergenic 35.0%
ACTTGGTTGTCCCAATATAA+GGG - chr1.2:62099590-62099609 None:intergenic 35.0%
AGGATAGTACTCAAATCCAT+AGG - chr1.2:62100175-62100194 None:intergenic 35.0%
ATAATGCACACAGGAATCTA+GGG + chr1.2:62098282-62098301 MS.gene07572:intron 35.0%
ATATCAACTGATAACTCCAC+AGG - chr1.2:62100195-62100214 None:intergenic 35.0%
ATCCGTATCCATTAATTAGC+GGG - chr1.2:62097144-62097163 None:intergenic 35.0%
CAATCAGCAGTTAGTAAAGA+AGG + chr1.2:62096926-62096945 MS.gene07572:intron 35.0%
CAATGAGGAATGTAGAAAAC+TGG + chr1.2:62099648-62099667 MS.gene07572:intron 35.0%
CATCATCGACAATGGTAAAA+AGG + chr1.2:62096107-62096126 MS.gene07572:CDS 35.0%
CATCCGTATCCATTAATTAG+CGG - chr1.2:62097145-62097164 None:intergenic 35.0%
CCAAAAGTTGAAAATATGGC+AGG - chr1.2:62096894-62096913 None:intergenic 35.0%
CCAACTTCAACCCTTATATT+GGG + chr1.2:62099577-62099596 MS.gene07572:intron 35.0%
CCGTAACTATAATTCTGCTA+CGG - chr1.2:62100281-62100300 None:intergenic 35.0%
CCGTAGCAGAATTATAGTTA+CGG + chr1.2:62100278-62100297 MS.gene07572:CDS 35.0%
CGACATTCCTGCATTATTAT+TGG + chr1.2:62098917-62098936 MS.gene07572:intron 35.0%
CTAAAACTATTGGGACTTTC+AGG - chr1.2:62099829-62099848 None:intergenic 35.0%
CTATTGTACTGAGAATCAAC+TGG + chr1.2:62096863-62096882 MS.gene07572:intron 35.0%
CTGTTATTGAGGTTCAGATT+CGG - chr1.2:62099133-62099152 None:intergenic 35.0%
CTTCTTTACTAACTGCTGAT+TGG - chr1.2:62096928-62096947 None:intergenic 35.0%
CTTGCATCGAAAATACAACT+TGG + chr1.2:62097904-62097923 MS.gene07572:intron 35.0%
GAATCATTCAAGCCCATTAA+TGG - chr1.2:62096805-62096824 None:intergenic 35.0%
GATAACACTCACAATACCTA+GGG - chr1.2:62097268-62097287 None:intergenic 35.0%
GCCGAAATAAAGCCATTAAT+GGG + chr1.2:62096790-62096809 MS.gene07572:intron 35.0%
GGAGAGTAGAAAAACAAAAC+TGG - chr1.2:62098750-62098769 None:intergenic 35.0%
GGGAATTCAGTACAACTTAA+GGG - chr1.2:62098217-62098236 None:intergenic 35.0%
TAAAAGGAAGTGAAAGTGGT+TGG + chr1.2:62097304-62097323 MS.gene07572:intron 35.0%
TACCATTGTCGATGATGATA+GGG - chr1.2:62096104-62096123 None:intergenic 35.0%
TACTATGGGGTCTTTAGATT+AGG + chr1.2:62098150-62098169 MS.gene07572:intron 35.0%
TACTTGGTTGTCCCAATATA+AGG - chr1.2:62099591-62099610 None:intergenic 35.0%
TAGATCTCTTGCCATTACTT+GGG + chr1.2:62096289-62096308 MS.gene07572:CDS 35.0%
TCATTGCCTCATGATAATTG+TGG - chr1.2:62099634-62099653 None:intergenic 35.0%
TCCAACTTCAACCCTTATAT+TGG + chr1.2:62099576-62099595 MS.gene07572:intron 35.0%
TCCACTGACAGTAGATTTAT+TGG - chr1.2:62099471-62099490 None:intergenic 35.0%
TGAAACACTTATCTATGGCA+TGG - chr1.2:62096993-62097012 None:intergenic 35.0%
TGATAACACTCACAATACCT+AGG - chr1.2:62097269-62097288 None:intergenic 35.0%
TGATAGCCAAGTTAATCACT+TGG - chr1.2:62099530-62099549 None:intergenic 35.0%
TGATGTGAAATTCCCTTAGT+TGG - chr1.2:62098627-62098646 None:intergenic 35.0%
TGCCGAAATAAAGCCATTAA+TGG + chr1.2:62096789-62096808 MS.gene07572:intron 35.0%
TGTTATTGAGGTTCAGATTC+GGG - chr1.2:62099132-62099151 None:intergenic 35.0%
TTACCATTGTCGATGATGAT+AGG - chr1.2:62096105-62096124 None:intergenic 35.0%
TTAGTAAAGAAGGTTTGCCT+AGG + chr1.2:62096936-62096955 MS.gene07572:intron 35.0%
TTCAAAATCCATAGCCACTA+GGG + chr1.2:62097009-62097028 MS.gene07572:intron 35.0%
TTCAAGATGATCAATGCCTA+TGG + chr1.2:62100156-62100175 MS.gene07572:CDS 35.0%
TTGATATAAAGGGTGGTCAT+TGG + chr1.2:62100418-62100437 MS.gene07572:CDS 35.0%
TTGCTAGCCAATAATAATGC+AGG - chr1.2:62098927-62098946 None:intergenic 35.0%
TTTCAAAATCCATAGCCACT+AGG + chr1.2:62097008-62097027 MS.gene07572:intron 35.0%
TTTCAATTGGAGAGAAAGAG+TGG + chr1.2:62096242-62096261 MS.gene07572:CDS 35.0%
TTTGGACTTCTTCATCTTCT+AGG - chr1.2:62100389-62100408 None:intergenic 35.0%
! AAAATTTTCACGCTCATGAG+TGG + chr1.2:62096443-62096462 MS.gene07572:intron 35.0%
! AAAGCCGATTCAAGAGATAT+TGG - chr1.2:62098591-62098610 None:intergenic 35.0%
! AACTGATTTCCTTCCAACTA+AGG + chr1.2:62098611-62098630 MS.gene07572:intron 35.0%
! AACTGGATTTCCTTTTTGTG+AGG + chr1.2:62099665-62099684 MS.gene07572:intron 35.0%
! ACTCATGAGCGTGAAAATTT+TGG - chr1.2:62096444-62096463 None:intergenic 35.0%
! ACTGATTTCCTTCCAACTAA+GGG + chr1.2:62098612-62098631 MS.gene07572:intron 35.0%
! ACTGGATTTCCTTTTTGTGA+GGG + chr1.2:62099666-62099685 MS.gene07572:intron 35.0%
! AGCAAGATAGAGATCCTTTT+TGG - chr1.2:62096070-62096089 None:intergenic 35.0%
! AGTTACGTACAGAGTATTTG+GGG - chr1.2:62100127-62100146 None:intergenic 35.0%
! AGTTGTATTTTCGATGCAAG+AGG - chr1.2:62097904-62097923 None:intergenic 35.0%
! ATTTTATCCGTGGATATCCA+CGG - chr1.2:62097054-62097073 None:intergenic 35.0%
! CAGTTGATTCTCAGTACAAT+AGG - chr1.2:62096865-62096884 None:intergenic 35.0%
! CCACTTTCACTTCCTTTTAA+AGG - chr1.2:62097303-62097322 None:intergenic 35.0%
! CCTGCCATATTTTCAACTTT+TGG + chr1.2:62096891-62096910 MS.gene07572:intron 35.0%
! CCTTTAAAAGGAAGTGAAAG+TGG + chr1.2:62097300-62097319 MS.gene07572:intron 35.0%
! CTAATTAATGGATACGGATG+CGG + chr1.2:62097145-62097164 MS.gene07572:intron 35.0%
! CTCATAGTTATAGATGGGTT+GGG - chr1.2:62098835-62098854 None:intergenic 35.0%
! CTGTTTCAGTTTTTGCACTT+AGG + chr1.2:62098722-62098741 MS.gene07572:intron 35.0%
! GAAAGAGTGGATTTCCATAT+TGG - chr1.2:62099801-62099820 None:intergenic 35.0%
! GCCATATTTTCAACTTTTGG+TGG + chr1.2:62096894-62096913 MS.gene07572:intron 35.0%
! TACCCGCTAATTAATGGATA+CGG + chr1.2:62097139-62097158 MS.gene07572:intron 35.0%
! TTCTATGTTGTTTGGCACTT+TGG - chr1.2:62098420-62098439 None:intergenic 35.0%
!! CTTTCACTTCCTTTTAAAGG+AGG - chr1.2:62097300-62097319 None:intergenic 35.0%
!! GCCCATTAATGGCTTTATTT+CGG - chr1.2:62096794-62096813 None:intergenic 35.0%
!! TTGGGTATTTTTACCAGAAG+GGG - chr1.2:62097755-62097774 None:intergenic 35.0%
!! TTTGTGCACATATTTTGGAC+AGG + chr1.2:62100028-62100047 MS.gene07572:intron 35.0%
!!! ATGGCTAGGGTTTTAAATTC+GGG - chr1.2:62096643-62096662 None:intergenic 35.0%
!!! GATGGCTAGGGTTTTAAATT+CGG - chr1.2:62096644-62096663 None:intergenic 35.0%
AAACTCCATAATCCAAGCCA+TGG - chr1.2:62097821-62097840 None:intergenic 40.0%
AACACATTGAGTGCTAACCT+AGG - chr1.2:62096956-62096975 None:intergenic 40.0%
AATCTCAAGCACATGAAGTC+AGG + chr1.2:62097774-62097793 MS.gene07572:intron 40.0%
ACACTGACCAATATTGGAAC+TGG + chr1.2:62096315-62096334 MS.gene07572:CDS 40.0%
ACCTTCCGGTAATTCTTCAA+AGG - chr1.2:62095878-62095897 None:intergenic 40.0%
AGATCTCTTGCCATTACTTG+GGG + chr1.2:62096290-62096309 MS.gene07572:CDS 40.0%
AGGAATAGAAGTTAGGCCTA+AGG + chr1.2:62100461-62100480 MS.gene07572:CDS 40.0%
ATACAACTGACCAGCATATG+TGG - chr1.2:62098535-62098554 None:intergenic 40.0%
CAACAAGCTTAGTAAGTGAG+GGG - chr1.2:62096540-62096559 None:intergenic 40.0%
CACAAACTGACCACTAACAT+AGG - chr1.2:62096833-62096852 None:intergenic 40.0%
CATAATGCACACAGGAATCT+AGG + chr1.2:62098281-62098300 MS.gene07572:intron 40.0%
CCCAATATAAGGGTTGAAGT+TGG - chr1.2:62099580-62099599 None:intergenic 40.0%
CGGGTTTATACAGATATCCA+TGG - chr1.2:62097585-62097604 None:intergenic 40.0%
CTAGATCTCTTGCCATTACT+TGG + chr1.2:62096288-62096307 MS.gene07572:CDS 40.0%
CTGAACCTCAATAACAGTGT+TGG + chr1.2:62099136-62099155 MS.gene07572:intron 40.0%
CTGAACTTCTTCATGTGTGT+TGG + chr1.2:62100064-62100083 MS.gene07572:CDS 40.0%
CTGGTTCAACTTTATGTGTG+GGG - chr1.2:62096688-62096707 None:intergenic 40.0%
CTGTCAAATGCAAGAGATGT+TGG - chr1.2:62098695-62098714 None:intergenic 40.0%
GAAGATATGAGAACCTAGTC+AGG - chr1.2:62099318-62099337 None:intergenic 40.0%
GACTTCATGTGCTTGAGATT+TGG - chr1.2:62097774-62097793 None:intergenic 40.0%
GATCACCAACACTGTTATTG+AGG - chr1.2:62099144-62099163 None:intergenic 40.0%
GCTAGCAAAAAAGGGTAGAA+AGG + chr1.2:62098939-62098958 MS.gene07572:intron 40.0%
GGGATGTAAATGGATATCCA+CGG - chr1.2:62097723-62097742 None:intergenic 40.0%
GGGGAATTCAGTACAACTTA+AGG - chr1.2:62098218-62098237 None:intergenic 40.0%
GTAGTGAGAGAAGCTGAAAA+TGG - chr1.2:62099037-62099056 None:intergenic 40.0%
GTGAAATTCCCTTAGTTGGA+AGG - chr1.2:62098623-62098642 None:intergenic 40.0%
GTGGCTATTAGGGATGTAAA+TGG - chr1.2:62097733-62097752 None:intergenic 40.0%
TAAATGGATATCCACGGATG+CGG - chr1.2:62097717-62097736 None:intergenic 40.0%
TACAACTGACCAGCATATGT+GGG - chr1.2:62098534-62098553 None:intergenic 40.0%
TAGATAAGTAAGCCATCAGC+TGG - chr1.2:62099739-62099758 None:intergenic 40.0%
TAGCAGTCCAGTTCCAATAT+TGG - chr1.2:62096325-62096344 None:intergenic 40.0%
TCATCTTCTCCCTCACAAAA+AGG - chr1.2:62099678-62099697 None:intergenic 40.0%
TCGGGTGTACAGTAAACTTT+AGG - chr1.2:62099114-62099133 None:intergenic 40.0%
TGAAGAAGTTCAGCAACTTC+AGG - chr1.2:62100057-62100076 None:intergenic 40.0%
TGGATATCTGTATAAACCCG+CGG + chr1.2:62097585-62097604 MS.gene07572:intron 40.0%
TGGATTTGAGTACTATCCTG+TGG + chr1.2:62100176-62100195 MS.gene07572:CDS 40.0%
TGGGCAACATAACTATTGTC+AGG - chr1.2:62099235-62099254 None:intergenic 40.0%
TTAAGAGCAAACCTGGATTC+AGG - chr1.2:62096350-62096369 None:intergenic 40.0%
TTGTTTGGCACTTTGGCTAA+TGG - chr1.2:62098413-62098432 None:intergenic 40.0%
! AATACCTAGGGTGCTTTCTT+AGG - chr1.2:62097256-62097275 None:intergenic 40.0%
! CTTTCAGGAGTATGAAAGAG+TGG - chr1.2:62099814-62099833 None:intergenic 40.0%
! GACAGCCTTTGAAGAATTAC+CGG + chr1.2:62095870-62095889 MS.gene07572:CDS 40.0%
! GAGATGGAACTGTGTTGATA+AGG - chr1.2:62098771-62098790 None:intergenic 40.0%
! GCTGGTTCAACTTTATGTGT+GGG - chr1.2:62096689-62096708 None:intergenic 40.0%
!! AGATAGAGATCCTTTTTGGC+AGG - chr1.2:62096066-62096085 None:intergenic 40.0%
!! ATCCTTTTTGGCAGGAATGT+TGG - chr1.2:62096058-62096077 None:intergenic 40.0%
!! ATTAGGAAGAGTGTTGTTCC+TGG + chr1.2:62098167-62098186 MS.gene07572:intron 40.0%
!! TGTGTTGGCTTGAAATTCGT+GGG + chr1.2:62100079-62100098 MS.gene07572:CDS 40.0%
!!! GAGCGTGAAAATTTTGGTTG+TGG - chr1.2:62096438-62096457 None:intergenic 40.0%
!!! GATTTTTTTGCCATCCCTAG+TGG - chr1.2:62097026-62097045 None:intergenic 40.0%
AAAGCGATTCCAAACAGCGT+CGG - chr1.2:62095989-62096008 None:intergenic 45.0%
AAATCCATAGCCACTAGGGA+TGG + chr1.2:62097013-62097032 MS.gene07572:intron 45.0%
ACGCTCATGAGTGGTGTATT+GGG + chr1.2:62096452-62096471 MS.gene07572:intron 45.0%
ACTTAGCTGAAGCGAAGTGA+AGG - chr1.2:62097847-62097866 None:intergenic 45.0%
AGATCCAAGCTCATATCCAG+TGG + chr1.2:62096574-62096593 MS.gene07572:intron 45.0%
AGCCAACATTCCTGCCAAAA+AGG + chr1.2:62096053-62096072 MS.gene07572:CDS 45.0%
AGCCTATGCAGAAGCTGAAT+AGG + chr1.2:62099370-62099389 MS.gene07572:intron 45.0%
AGTATTTGGGGACAAGGCAA+GGG - chr1.2:62100115-62100134 None:intergenic 45.0%
CAGCCATCGCTTCTAACATT+AGG - chr1.2:62100333-62100352 None:intergenic 45.0%
CGTCCTAATGTTAGAAGCGA+TGG + chr1.2:62100327-62100346 MS.gene07572:CDS 45.0%
CTAATGTTAGAAGCGATGGC+TGG + chr1.2:62100331-62100350 MS.gene07572:CDS 45.0%
GAATGTTGCAGTTCTCAAGC+TGG + chr1.2:62099696-62099715 MS.gene07572:intron 45.0%
GATCCAAGCTCATATCCAGT+GGG + chr1.2:62096575-62096594 MS.gene07572:intron 45.0%
GCCAAGTTAATCACTTGGCA+CGG - chr1.2:62099525-62099544 None:intergenic 45.0%
GGATACGGATGCGGATTTAA+TGG + chr1.2:62097154-62097173 MS.gene07572:intron 45.0%
GGCAGTTCTTAAATGGGAGA+TGG - chr1.2:62098787-62098806 None:intergenic 45.0%
TAGTCAGCAGGATGACTTGA+TGG - chr1.2:62096662-62096681 None:intergenic 45.0%
TCCACGGATAAAATCCGTCA+CGG + chr1.2:62097060-62097079 MS.gene07572:intron 45.0%
TTCTGCATAGGCTTTGCAAG+TGG - chr1.2:62099363-62099382 None:intergenic 45.0%
TTTAATGGTATCCACACCCG+CGG + chr1.2:62097169-62097188 MS.gene07572:intron 45.0%
TTTATCTAACGGAGCGGACA+CGG + chr1.2:62097679-62097698 MS.gene07572:intron 45.0%
! ATTCCAAACAGCGTCGGAAT+CGG - chr1.2:62095983-62096002 None:intergenic 45.0%
! GCCTTTGAAGAATTACCGGA+AGG + chr1.2:62095874-62095893 MS.gene07572:CDS 45.0%
! GGCTGGTTCAACTTTATGTG+TGG - chr1.2:62096690-62096709 None:intergenic 45.0%
! GTACAGAGTATTTGGGGACA+AGG - chr1.2:62100121-62100140 None:intergenic 45.0%
! TTTGAAAGGCACACCTGACT+AGG + chr1.2:62099302-62099321 MS.gene07572:intron 45.0%
! TTTGGCAGGAATGTTGGCTA+GGG - chr1.2:62096052-62096071 None:intergenic 45.0%
!! ACTTCCTAAGAAAGCACCCT+AGG + chr1.2:62097249-62097268 MS.gene07572:intron 45.0%
!! ATAGATGGGTTGGGAGACTT+AGG - chr1.2:62098826-62098845 None:intergenic 45.0%
!! ATAGCGGGTATGAATATCCG+CGG - chr1.2:62097189-62097208 None:intergenic 45.0%
!! GGTATTTTTACCAGAAGGGG+TGG - chr1.2:62097752-62097771 None:intergenic 45.0%
!! GTGTGTTGGCTTGAAATTCG+TGG + chr1.2:62100078-62100097 MS.gene07572:CDS 45.0%
!! TTTTGGCAGGAATGTTGGCT+AGG - chr1.2:62096053-62096072 None:intergenic 45.0%
!!! GCAGTTCTCAAGCTGGTTTT+CGG + chr1.2:62099703-62099722 MS.gene07572:intron 45.0%
!!! TTTATTTTTATTAAATGTAA+GGG + chr1.2:62097394-62097413 MS.gene07572:intron 5.0%
AAGGGTGGTCATTGGAAGAG+AGG + chr1.2:62100426-62100445 MS.gene07572:CDS 50.0%
ACCAGAAGGGGTGGCTATTA+GGG - chr1.2:62097743-62097762 None:intergenic 50.0%
AGAACTAGAGGTCTGTTGCG+CGG + chr1.2:62096725-62096744 MS.gene07572:intron 50.0%
ATATCCGCGCGGATATGGAT+AGG + chr1.2:62097642-62097661 MS.gene07572:intron 50.0%
ATGCCCACTGGATATGAGCT+TGG - chr1.2:62096581-62096600 None:intergenic 50.0%
ATTACCGGAAGGTTGCATCG+CGG + chr1.2:62095885-62095904 MS.gene07572:CDS 50.0%
CAACTTAAGGGTTACGAGCC+TGG - chr1.2:62098205-62098224 None:intergenic 50.0%
CACGCTCATGAGTGGTGTAT+TGG + chr1.2:62096451-62096470 MS.gene07572:intron 50.0%
CCACGGATAAAATCCGTCAC+GGG + chr1.2:62097061-62097080 MS.gene07572:intron 50.0%
CGAAGTTTCTGATGCCACCA+TGG + chr1.2:62097801-62097820 MS.gene07572:intron 50.0%
CGCCCTATCATCATCGACAA+TGG + chr1.2:62096099-62096118 MS.gene07572:CDS 50.0%
CGCGGATACCTCAAAATCCA+CGG + chr1.2:62097603-62097622 MS.gene07572:intron 50.0%
CTCCATAATCCAAGCCATGG+TGG - chr1.2:62097818-62097837 None:intergenic 50.0%
GAGATGGGAGAGTTCTTCTC+AGG + chr1.2:62100363-62100382 MS.gene07572:CDS 50.0%
GAGTATTTGGGGACAAGGCA+AGG - chr1.2:62100116-62100135 None:intergenic 50.0%
GCCGTGCCAAGTGATTAACT+TGG + chr1.2:62099521-62099540 MS.gene07572:intron 50.0%
GCTGAATAGGCCACATGTGT+TGG + chr1.2:62099383-62099402 MS.gene07572:intron 50.0%
GGCAAAAAAATCCGCATCCG+TGG + chr1.2:62097034-62097053 MS.gene07572:intron 50.0%
GGCCTATTCAGCTTCTGCAT+AGG - chr1.2:62099375-62099394 None:intergenic 50.0%
GGGGTGACACTGACCAATAT+TGG + chr1.2:62096309-62096328 MS.gene07572:CDS 50.0%
GGTGGCATCAGAAACTTCGT+TGG - chr1.2:62097800-62097819 None:intergenic 50.0%
GTCAGTGTCACCCCAAGTAA+TGG - chr1.2:62096303-62096322 None:intergenic 50.0%
TACCAGAAGGGGTGGCTATT+AGG - chr1.2:62097744-62097763 None:intergenic 50.0%
TATCACACTATCCGCATCCG+TGG + chr1.2:62097703-62097722 MS.gene07572:intron 50.0%
TATCCGCGCGGATATGGATA+GGG + chr1.2:62097643-62097662 MS.gene07572:intron 50.0%
TGACCAGCATATGTGGGACT+GGG - chr1.2:62098528-62098547 None:intergenic 50.0%
TGCAAGTGTGCCAACACATG+TGG - chr1.2:62099396-62099415 None:intergenic 50.0%
TGTGTGGGGTTATAGTCAGC+AGG - chr1.2:62096674-62096693 None:intergenic 50.0%
TGTTAGAAGCGATGGCTGGT+TGG + chr1.2:62100335-62100354 MS.gene07572:CDS 50.0%
TTTCTGATGCCACCATGGCT+TGG + chr1.2:62097806-62097825 MS.gene07572:intron 50.0%
TTTGCCATCCCTAGTGGCTA+TGG - chr1.2:62097020-62097039 None:intergenic 50.0%
! AGCAGGATGACTTGATGGCT+AGG - chr1.2:62096657-62096676 None:intergenic 50.0%
! AGTTCTGGCGATGGACAGAT+CGG - chr1.2:62096711-62096730 None:intergenic 50.0%
! CGGGTAATCCGTGGATTTTG+AGG - chr1.2:62097614-62097633 None:intergenic 50.0%
! GCACACAGGAATCTAGGGTT+GGG + chr1.2:62098287-62098306 MS.gene07572:intron 50.0%
! GCAGGATGACTTGATGGCTA+GGG - chr1.2:62096656-62096675 None:intergenic 50.0%
! GGCTGGTTGGAGATTGAGAT+GGG + chr1.2:62100348-62100367 MS.gene07572:CDS 50.0%
! TAGCGGGTATGAATATCCGC+GGG - chr1.2:62097188-62097207 None:intergenic 50.0%
! TCCACGGATTACCCGCTAAA+CGG + chr1.2:62097619-62097638 MS.gene07572:intron 50.0%
! TGCACACAGGAATCTAGGGT+TGG + chr1.2:62098286-62098305 MS.gene07572:intron 50.0%
! TGCCACCATGGCTTGGATTA+TGG + chr1.2:62097813-62097832 MS.gene07572:intron 50.0%
! TGGCTGGTTGGAGATTGAGA+TGG + chr1.2:62100347-62100366 MS.gene07572:CDS 50.0%
!! AGAGTGTTGTTCCTGGTGAC+CGG + chr1.2:62098174-62098193 MS.gene07572:intron 50.0%
!!! CGTGGATTTTGAGGTATCCG+CGG - chr1.2:62097605-62097624 None:intergenic 50.0%
!!! GTGGATTTTGAGGTATCCGC+GGG - chr1.2:62097604-62097623 None:intergenic 50.0%
AACGGATATCCGCGCGGATA+TGG + chr1.2:62097637-62097656 MS.gene07572:intron 55.0%
AATCCGTCACGGGTACAGAG+CGG + chr1.2:62097071-62097090 MS.gene07572:intron 55.0%
AGTACAACTCCACTCGACGC+TGG + chr1.2:62095919-62095938 MS.gene07572:CDS 55.0%
ATACCCTGCCCACTATCCAG+TGG - chr1.2:62099871-62099890 None:intergenic 55.0%
ATCACTTGGCACGGCTGCAA+AGG - chr1.2:62099516-62099535 None:intergenic 55.0%
ATTGCCGCGATGCAACCTTC+CGG - chr1.2:62095892-62095911 None:intergenic 55.0%
CTGACCAGCATATGTGGGAC+TGG - chr1.2:62098529-62098548 None:intergenic 55.0%
CTGTCCATCGCCAGAACTAG+AGG + chr1.2:62096713-62096732 MS.gene07572:intron 55.0%
GCGCGGATATGGATAGGGTA+CGG + chr1.2:62097648-62097667 MS.gene07572:intron 55.0%
GGACTGCTATGCCTGAATCC+AGG + chr1.2:62096336-62096355 MS.gene07572:CDS 55.0%
GGTATGAATATCCGCGGGTG+TGG - chr1.2:62097183-62097202 None:intergenic 55.0%
GGTCGTTGTAGTCCAGCTGA+TGG + chr1.2:62099724-62099743 MS.gene07572:intron 55.0%
GGTTACGAGCCTGGTATACC+CGG - chr1.2:62098196-62098215 None:intergenic 55.0%
GTACCCTATCCATATCCGCG+CGG - chr1.2:62097649-62097668 None:intergenic 55.0%
TATCCGCTCTGTACCCGTGA+CGG - chr1.2:62097077-62097096 None:intergenic 55.0%
TCCCTAATAGCCACCCCTTC+TGG + chr1.2:62097739-62097758 MS.gene07572:intron 55.0%
TCCGCATCCGTGGATATCCA+CGG + chr1.2:62097044-62097063 MS.gene07572:intron 55.0%
TCCGTGGATATCCACGGATG+CGG - chr1.2:62097048-62097067 None:intergenic 55.0%
TGGGACTGGGCACACAGTAT+GGG - chr1.2:62098515-62098534 None:intergenic 55.0%
! GAGTGTTGTTCCTGGTGACC+GGG + chr1.2:62098175-62098194 MS.gene07572:intron 55.0%
! GCAGGAATGTTGGCTAGGGA+AGG - chr1.2:62096048-62096067 None:intergenic 55.0%
! GCGCAACAGACCTCTAGTTC+TGG - chr1.2:62096726-62096745 None:intergenic 55.0%
! TCCGTTTAGCGGGTAATCCG+TGG - chr1.2:62097623-62097642 None:intergenic 55.0%
!! CAGACCTCTAGTTCTGGCGA+TGG - chr1.2:62096720-62096739 None:intergenic 55.0%
!!! CCCGTGACGGATTTTATCCG+TGG - chr1.2:62097064-62097083 None:intergenic 55.0%
CCGCGCGGATATCCGTTTAG+CGG - chr1.2:62097634-62097653 None:intergenic 60.0%
CCGCTAAACGGATATCCGCG+CGG + chr1.2:62097631-62097650 MS.gene07572:intron 60.0%
CGCGCGGATATCCGTTTAGC+GGG - chr1.2:62097633-62097652 None:intergenic 60.0%
CGGATCCAAACGCGAGACGT+AGG + chr1.2:62100253-62100272 MS.gene07572:CDS 60.0%
GTGCCCAGTCCCACATATGC+TGG + chr1.2:62098522-62098541 MS.gene07572:intron 60.0%
GTGGGACTGGGCACACAGTA+TGG - chr1.2:62098516-62098535 None:intergenic 60.0%
TCCTGGTGACCGGGTATACC+AGG + chr1.2:62098184-62098203 MS.gene07572:intron 60.0%
CGGTGCCTACGTCTCGCGTT+TGG - chr1.2:62100261-62100280 None:intergenic 65.0%
CTGGCGATGGACAGATCGGC+TGG - chr1.2:62096707-62096726 None:intergenic 65.0%
GCCTGGTATACCCGGTCACC+AGG - chr1.2:62098188-62098207 None:intergenic 65.0%
! CGGCCGATTCCGACGCTGTT+TGG + chr1.2:62095977-62095996 MS.gene07572:CDS 65.0%
! GAGAGTCTGCCAGCGTCGAG+TGG - chr1.2:62095931-62095950 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 62095868 62100494 62095868 ID=MS.gene07572
chr1.2 mRNA 62095868 62100494 62095868 ID=MS.gene07572.t1;Parent=MS.gene07572
chr1.2 exon 62095868 62096128 62095868 ID=MS.gene07572.t1.exon1;Parent=MS.gene07572.t1
chr1.2 CDS 62095868 62096128 62095868 ID=cds.MS.gene07572.t1;Parent=MS.gene07572.t1
chr1.2 exon 62096239 62096357 62096239 ID=MS.gene07572.t1.exon2;Parent=MS.gene07572.t1
chr1.2 CDS 62096239 62096357 62096239 ID=cds.MS.gene07572.t1;Parent=MS.gene07572.t1
chr1.2 exon 62100050 62100494 62100050 ID=MS.gene07572.t1.exon3;Parent=MS.gene07572.t1
chr1.2 CDS 62100050 62100494 62100050 ID=cds.MS.gene07572.t1;Parent=MS.gene07572.t1
Gene Sequence

>MS.gene07572

ATGACAGCCTTTGAAGAATTACCGGAAGGTTGCATCGCGGCAATTCTCTCTAGTACAACTCCACTCGACGCTGGCAGACTCTCCCTCGTTTCTAAGAATTTTCTTTCTGCGGCCGATTCCGACGCTGTTTGGAATCGCTTTCTCCCTTCTGATATCTCATCTATCATCTCACACTTTCCTTCCCTAGCCAACATTCCTGCCAAAAAGGATCTCTATCTTGCTCTATCTGATCGCCCTATCATCATCGACAATGGTAAAAAGGTATTTTTCTTCCCAACTACTGATTTCTCGAATATTATTGAATTGGTCAGTTTTGGAGTTTCAAATATTTAGTTAAGAATGCTAATTAGCGTTGGATTTATGAAATGTAGAGTTTTCAATTGGAGAGAAAGAGTGGAAAGAAGTGTTATATGCTTTCTGCTAGATCTCTTGCCATTACTTGGGGTGACACTGACCAATATTGGAACTGGACTGCTATGCCTGAATCCAGGTTTGCTCTTAAATTTTCTACTTGCTTAACTTAACTTAATAAATTTTCTAGTTAGTATCAGAGTCTATTCATTCAGACCACAACCAAAATTTTCACGCTCATGAGTGGTGTATTGGGAAAAATGCATGTCTCATGTTGAAAAGAAATAAGGCATGAAAATAGTTTACAAAAGAGAGGAACCCCTCACTTACTAAGCTTGTTGTTTAAGAATGTGCTAGATCCAAGCTCATATCCAGTGGGCATGATTTAAAAAAAAAAAAAAAAAAACTCAAGTCAGAAAGTCCCGAATTTAAAACCCTAGCCATCAAGTCATCCTGCTGACTATAACCCCACACATAAAGTTGAACCAGCCGATCTGTCCATCGCCAGAACTAGAGGTCTGTTGCGCGGTCATGAACCTAAGCAATTTTAGGCTCTCTTGTTTTTTCATGTGCCGAAATAAAGCCATTAATGGGCTTGAATGATTCTATTTCCTATGTTAGTGGTCAGTTTGTGTTGATTGATCCTATTGTACTGAGAATCAACTGGCTTTTCCTGCCATATTTTCAACTTTTGGTGGTGAAAATTCCAATCAGCAGTTAGTAAAGAAGGTTTGCCTAGGTTAGCACTCAATGTGTTGCTCTACTTCTAGACCATGCCATAGATAAGTGTTTCAAAATCCATAGCCACTAGGGATGGCAAAAAAATCCGCATCCGTGGATATCCACGGATAAAATCCGTCACGGGTACAGAGCGGATATGTTAATAGATATCCATGGATAAAATAAACGGATTTTTTAACTACCCGCTAATTAATGGATACGGATGCGGATTTAATGGTATCCACACCCGCGGATATTCATACCCGCTATTAAACGGAGTAAATTACATAAATAACCTCAATATCATTCAACTTCCTAAGAAAGCACCCTAGGTATTGTGAGTGTTATCAGTTATTACCCTCCTTTAAAAGGAAGTGAAAGTGGTTGGGATTGTTGATGCTTTGTTTTTGTTGAATATGATGAGCTTTACTTATGTTTTTGTTAAATCAAAGAACTTTATTTTTATTAAATGTAAGGGACTTTATTTATGATTTTGTTGAGTCAATGATCTTTGTTGTTATTGTAATGTATGAATACTATGTTTTGCTAAAAAGAAAAGAAAATGCATGTGAAGAACCTTTGTTTCTAAATTTTAGCTAATAAAAAGTAAACAAATTTTTTATTTTATTTTTATAAATGTTATCCATGGATATCTGTATAAACCCGCGGATACCTCAAAATCCACGGATTACCCGCTAAACGGATATCCGCGCGGATATGGATAGGGTACGGATTTCATATTTATCTAACGGAGCGGACACGGATATCACACTATCCGCATCCGTGGATATCCATTTACATCCCTAATAGCCACCCCTTCTGGTAAAAATACCCAAATCTCAAGCACATGAAGTCAGGCCAACGAAGTTTCTGATGCCACCATGGCTTGGATTATGGAGTTTATTCCTTCACTTCGCTTCAGCTAAGTTTCTGAAGCAAACATTCATCTATTCACTCATTTACCTCTTGCATCGAAAATACAACTTGGAATGGAGCACCTAGATCTTTTATCATGTAGTCCTTCATCTGTACAGTTTCTTTTCTTGATCCAAATCATTAGATTTTGGATTCAACGACAGCCAATCCTATTTTTTTTCAATGCTTAATTAAATTTGCATGACTTTTTTCTTTACTTTTCAGTTCCTTCAATCAAGTTCAAACTGATTTCTTCGAATTTCATTGCTATAAACTTATACCTATTCCATTATTTTTACTATGGGGTCTTTAGATTAGGAAGAGTGTTGTTCCTGGTGACCGGGTATACCAGGCTCGTAACCCTTAAGTTGTACTGAATTCCCCATTTTGTGATGATGTTTCTGTAATTAAGTTTCAAATAAAGTATCATAATGCACACAGGAATCTAGGGTTGGGCATTTGTCTTCAAAACGTTATTGATTCTTAAAAAAAAAAGTAACAGTATAACACCAACTTTCTTTTTTCTGATTTTAATTGTGGTCCTAATTATATATGTCCATTAGCCAAAGTGCCAAACAACATAGAATTTCATTTTATTTAAATACTAAGTTACTTGCTCTTTCTTTTAATAATATATCATAAATTGTGATGTTTGGGGCCCATACTGTGTGCCCAGTCCCACATATGCTGGTCAGTTGTATGTCTTCTCATTCTGACTTTGAGATGTTGCAATGCCAATATCTCTTGAATCGGCTTTAACTGATTTCCTTCCAACTAAGGGAATTTCACATCAATTTTCAAGCGTAAGACTACAATACAAGCATGTTGAGAATAGACACCAACATCTCTTGCATTTGACAGATCTTTGCTGTTTCAGTTTTTGCACTTAGGTACCAGTTTTGTTTTTCTACTCTCCTTATCAACACAGTTCCATCTCCCATTTAAGAACTGCCAAATTAGCTTCTGTATCCTAAGTCTCCCAACCCATCTATAACTATGAGTTTTTTAGCTTCTTATGTTGTGCCTATGCTTTTTCATAATTGTTAGATACGTTCTCGGAAAGCGACATTCCTGCATTATTATTGGCTAGCAAAAAAGGGTAGAAAGGCTGTGTATTGAATGCTATAAGTGAAAGACCATTTTAAATTTCAAGGGATGTAAAGTTGAATGAAACTATTTTCCATTTTCAGCTTCTCTCACTACTTTCACTTTCTCCTCATATTTCCTTCTAAGTGAATACTTGTTAAATTATTCAATCCTAAAGTTTACTGTACACCCGAATCTGAACCTCAATAACAGTGTTGGTGATCTACTGTCTCATAATTCTCTATATAGATAGTTAATAAGTAGAATACTATTATACTTGATAAATTCTAGACCTGACAATAGTTATGTTGCCCAAAAAATAAGTCTGTATGTATATGAGCATTGCAGTCCCCTTTTTGATATTTGAAAGGCACACCTGACTAGGTTCTCATATCTTCTGAAACTTCTTTCTTACATTAACCACTTGCAAAGCCTATGCAGAAGCTGAATAGGCCACATGTGTTGGCACACTTGCAGATCCGCTACATGTTACCATTTTTTCTTTGTGATTTTACTTTGTCATGGAAACCAATAAATCTACTGTCAGTGGATCATTTGTGAAGACTGAGTATACCTTTGCAGCCGTGCCAAGTGATTAACTTGGCTATCATATCTTGTTTATAATTTTGTCTTTTCTCCAACTTCAACCCTTATATTGGGACAACCAAGTAGTTGTCTATATTGCTTCTATCCACAATTATCATGAGGCAATGAGGAATGTAGAAAACTGGATTTCCTTTTTGTGAGGGAGAAGATGAATGTTGCAGTTCTCAAGCTGGTTTTCGGTCGTTGTAGTCCAGCTGATGGCTTACTTATCTACAAATGCTCTTTCTACAACTCACTTTCGTGAAATTTTGTCCAATATGGAAATCCACTCTTTCATACTCCTGAAAGTCCCAATAGTTTTAGATATTTTAGACAAGATCCACCACTGGATAGTGGGCAGGGTATTATTTACAACAACCAATATAACTTAGAAGTTTATCATAATCAGTTACAGCTTTAAACAATTTAGTCATACTTGGTTTACAGTTTCCAAATTTTAGTTGATGAGCCTACATTGTTCCTGTATTCTTATCTTTGCAACTTTTGTGCACATATTTTGGACAGGTTTCCTGAAGTTGCTGAACTTCTTCATGTGTGTTGGCTTGAAATTCGTGGGAAGATAAACACCCTTGCCTTGTCCCCAAATACTCTGTACGTAACTTATCTTGTGTTCAAGATGATCAATGCCTATGGATTTGAGTACTATCCTGTGGAGTTATCAGTTGATATCAAAGGTGGCCAAAGTAGCACTAAAATTGTCTGTTTAGCGGATCCAAACGCGAGACGTAGGCACCGTAGCAGAATTATAGTTACGGAGCCCAACAGAGTATTAAGATTGCAACGTCCTAATGTTAGAAGCGATGGCTGGTTGGAGATTGAGATGGGAGAGTTCTTCTCAGGCCTAGAAGATGAAGAAGTCCAAATGAGTGTTATTGATATAAAGGGTGGTCATTGGAAGAGAGGTTTCTTTGTTGAAGGAATAGAAGTTAGGCCTAAGGAAGACCATTAA
Protein sequence

>MS.gene07572.t1

MTAFEELPEGCIAAILSSTTPLDAGRLSLVSKNFLSAADSDAVWNRFLPSDISSIISHFPSLANIPAKKDLYLALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNWTAMPESRFPEVAELLHVCWLEIRGKINTLALSPNTLYVTYLVFKMINAYGFEYYPVELSVDIKGGQSSTKIVCLADPNARRRHRSRIIVTEPNRVLRLQRPNVRSDGWLEIEMGEFFSGLEDEEVQMSVIDIKGGHWKRGFFVEGIEVRPKEDH