AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74867

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74867.t1 MTR_1g079250 97.667 300 7 0 1 300 1 300 0.0 607
MS.gene74867.t1 MTR_1g026510 74.419 301 72 1 1 296 1 301 3.45e-165 461
MS.gene74867.t1 MTR_1g079260 69.286 280 80 3 1 280 1 274 4.13e-137 389
MS.gene74867.t1 MTR_1g079180 67.266 278 78 5 1 278 1 265 5.34e-125 358
MS.gene74867.t1 MTR_1g079200 68.345 278 74 4 1 278 1 264 5.91e-124 355
MS.gene74867.t1 MTR_1g100597 66.549 284 83 7 1 281 1 275 1.50e-118 342
MS.gene74867.t1 MTR_1g079370 63.309 278 89 5 1 278 1 265 1.38e-117 339
MS.gene74867.t1 MTR_1g079850 64.236 288 92 5 1 281 1 284 2.03e-116 337
MS.gene74867.t1 MTR_1g079460 63.441 279 90 4 1 279 1 267 7.22e-115 332
MS.gene74867.t1 MTR_1g079380 62.759 290 94 6 1 289 1 277 3.39e-114 332
MS.gene74867.t1 MTR_1g079230 58.007 281 113 2 1 281 1 276 4.39e-99 292
MS.gene74867.t1 MTR_1g100613 64.730 241 74 4 20 255 5 239 1.02e-97 288
MS.gene74867.t1 MTR_3g006850 54.072 307 111 4 2 281 15 318 8.41e-94 280
MS.gene74867.t1 MTR_3g452600 56.522 276 101 6 4 278 10 267 2.51e-90 270
MS.gene74867.t1 MTR_1g079350 53.191 282 121 7 1 278 1 275 2.96e-86 259
MS.gene74867.t1 MTR_3g450990 51.370 292 107 8 4 278 10 283 1.44e-81 248
MS.gene74867.t1 MTR_2g079100 52.281 285 113 7 3 285 8 271 7.96e-80 243
MS.gene74867.t1 MTR_1g079410 47.163 282 130 6 3 279 7 274 2.63e-77 237
MS.gene74867.t1 MTR_7g096300 54.212 273 100 8 1 268 1 253 6.44e-76 246
MS.gene74867.t1 MTR_1g079340 49.320 294 125 7 1 278 40 325 1.52e-75 234
MS.gene74867.t1 MTR_1g079140 44.667 300 141 5 4 281 13 309 9.60e-73 226
MS.gene74867.t1 MTR_1g078470 56.771 192 68 5 87 278 8 184 1.51e-62 196
MS.gene74867.t1 MTR_1g079400 43.253 289 129 8 4 278 12 279 2.84e-62 199
MS.gene74867.t1 MTR_7g112550 42.254 284 144 8 7 279 10 284 1.11e-60 194
MS.gene74867.t1 MTR_1g083580 38.596 285 154 9 4 278 8 281 2.75e-55 181
MS.gene74867.t1 MTR_1g079240 50.265 189 73 4 90 278 12 179 7.80e-47 155
MS.gene74867.t1 MTR_7g112560 35.612 278 155 9 4 278 1 257 7.46e-45 153
MS.gene74867.t1 MTR_1g079350 60.150 133 51 1 1 131 1 133 3.13e-44 150
MS.gene74867.t1 MTR_2g042540 67.290 107 32 2 1 106 1 105 8.01e-42 141
MS.gene74867.t1 MTR_4g023570 35.018 277 138 9 4 278 1 237 1.31e-41 144
MS.gene74867.t1 MTR_1g079130 42.857 196 90 4 104 281 1 192 3.84e-38 134
MS.gene74867.t1 MTR_1g076870 55.714 140 41 5 131 256 2 134 8.83e-38 131
MS.gene74867.t1 MTR_7g096310 57.258 124 47 3 70 191 44 163 7.23e-33 119
MS.gene74867.t1 MTR_1g078460 63.441 93 31 1 1 93 64 153 7.19e-31 113
MS.gene74867.t1 MTR_3g058640 51.351 111 43 3 131 241 7 106 3.13e-24 94.7
MS.gene74867.t1 MTR_1g079210 50.794 126 53 4 132 251 7 129 1.20e-23 94.4
MS.gene74867.t1 MTR_7g103380 26.667 285 178 8 6 279 21 285 8.23e-21 90.5
MS.gene74867.t1 MTR_0113s0040 32.215 149 95 3 3 149 21 165 7.03e-20 87.8
MS.gene74867.t1 MTR_4g083970 28.643 199 109 6 83 278 122 290 1.13e-17 81.6
MS.gene74867.t1 MTR_1g101390 32.877 146 92 3 6 149 30 171 1.22e-17 81.6
MS.gene74867.t1 MTR_4g102770 33.333 144 95 1 6 149 21 163 2.78e-17 80.5
MS.gene74867.t1 MTR_0002s0020 31.579 152 93 3 6 150 24 171 3.83e-17 80.1
MS.gene74867.t1 MTR_5g010800 31.544 149 92 5 6 150 19 161 4.28e-16 77.0
MS.gene74867.t1 MTR_1g079220 51.948 77 26 3 168 244 1 66 4.36e-15 69.3
MS.gene74867.t1 MTR_1g079390 63.462 52 16 2 222 273 7 55 1.33e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74867.t1 AT2G02240 39.711 277 143 7 4 277 61 316 3.56e-60 194
MS.gene74867.t1 AT2G02250 40.364 275 145 7 4 277 47 303 9.99e-60 193
MS.gene74867.t1 AT1G80110 42.491 273 134 7 7 277 4 255 1.34e-59 191
MS.gene74867.t1 AT2G02360 38.628 277 145 7 4 277 14 268 2.35e-58 188
MS.gene74867.t1 AT2G02340 37.500 280 161 6 1 277 33 301 5.53e-57 186
MS.gene74867.t1 AT2G02230 34.951 309 160 7 4 278 32 333 8.22e-55 181
MS.gene74867.t1 AT1G09155 41.404 285 147 9 7 278 3 280 1.16e-54 179
MS.gene74867.t1 AT1G56250 38.028 284 158 7 7 278 4 281 3.13e-50 167
MS.gene74867.t1 AT1G56240 37.102 283 160 7 7 277 4 280 3.80e-50 167
MS.gene74867.t1 AT2G02350 36.170 282 153 10 2 277 22 282 3.05e-47 160
MS.gene74867.t1 AT2G02310 34.767 279 161 8 4 279 45 305 1.90e-42 148
MS.gene74867.t1 AT2G02300 34.155 284 148 10 2 279 32 282 7.61e-40 141
MS.gene74867.t1 AT2G02320 34.532 278 155 10 6 277 42 298 4.31e-39 139
MS.gene74867.t1 AT5G24560 49.655 145 65 3 4 147 3 140 2.06e-38 134
MS.gene74867.t1 AT3G53000 28.475 295 169 10 6 284 23 291 2.53e-25 103
MS.gene74867.t1 AT2G02350 31.667 180 102 8 104 277 1 165 4.27e-17 77.8
MS.gene74867.t1 AT3G61060 23.929 280 190 9 6 283 27 285 4.72e-17 80.1
MS.gene74867.t1 AT3G61060 23.843 281 190 10 6 283 27 286 1.12e-15 76.3
MS.gene74867.t1 AT5G52120 32.258 155 99 3 1 150 18 171 2.93e-15 75.1
MS.gene74867.t1 AT1G12710 30.137 146 97 3 6 150 30 171 6.19e-13 68.2
MS.gene74867.t1 AT1G63090 27.439 164 112 5 6 168 28 185 5.03e-12 65.5
MS.gene74867.t1 AT1G12710 28.302 159 109 3 6 163 30 184 5.79e-11 62.8

Find 82 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAACCAAGATTGTCATTT+TGG 0.152527 1.1:-58914393 MS.gene74867:CDS
ATGGGAGAGTTCTTCATTTC+AGG 0.198529 1.1:-58914257 MS.gene74867:CDS
TAAGTTGCATACAGAGTATT+TGG 0.214194 1.1:+58914503 None:intergenic
CATTATCGACGATGGTAAAA+AGG 0.282042 1.1:-58917601 MS.gene74867:intron
GGACTGCTATGCCTGATTCT+AGG 0.282404 1.1:-58917374 MS.gene74867:intron
GAATAAAGGATGGTTATTAT+TGG 0.295483 1.1:-58914199 MS.gene74867:CDS
GAAGTCCAAATGAGTATTAC+TGG 0.310031 1.1:-58914221 MS.gene74867:CDS
TTAAGAAGCTCAACAACTTC+AGG 0.331549 1.1:+58914575 None:intergenic
TTATTCCAGTAATACTCATT+TGG 0.337010 1.1:+58914216 None:intergenic
CTTGTGTTCAAGATGATTGA+TGG 0.345529 1.1:-58914479 MS.gene74867:CDS
AATGAGTATTACTGGAATAA+AGG 0.347461 1.1:-58914213 MS.gene74867:CDS
AAGCGGCTCAACAGAATATT+AGG 0.348185 1.1:-58914350 MS.gene74867:CDS
CCGCCGATTCCGACGCCGTC+TGG 0.349132 1.1:-58917740 MS.gene74867:CDS
GATGATAAAGTCGAAGAATT+GGG 0.349360 1.1:+58917695 None:intergenic
AGATGATAAAGTCGAAGAAT+TGG 0.350318 1.1:+58917694 None:intergenic
CTAGATCTCTCGACATTGAT+TGG 0.377382 1.1:-58917422 MS.gene74867:CDS
ATCTAAATACTTTGTTGTCC+TGG 0.383131 1.1:+58914324 None:intergenic
TTCAAGATGATTGATGGCTT+TGG 0.384715 1.1:-58914473 MS.gene74867:CDS
TGTTGTTTACTGTCTTCCTT+AGG 0.392054 1.1:+58914140 None:intergenic
GGGATGATGATGATGAATAT+TGG 0.392937 1.1:-58917401 MS.gene74867:CDS
TTACCATCGTCGATAATGAT+TGG 0.395680 1.1:+58917606 None:intergenic
CTCATTTGGACTTCTTCATC+TGG 0.401897 1.1:+58914230 None:intergenic
TTGTTGAAGGAATAGAAGTT+AGG 0.404080 1.1:-58914163 MS.gene74867:CDS
AGCCGCTTACATTCTACATC+TGG 0.408123 1.1:+58914365 None:intergenic
TATGCAGGGGTCTTGTGTCT+TGG 0.414010 1.1:-58914107 MS.gene74867:CDS
TACCATCGTCGATAATGATT+GGG 0.414053 1.1:+58917607 None:intergenic
TGAAATTCAGAGCGTTCAAT+TGG 0.422110 1.1:-58917481 MS.gene74867:intron
CACTCATCACTTCTAATACT+AGG 0.427579 1.1:+58914293 None:intergenic
AAGAGAGGTTTCTTTGTTGA+AGG 0.432696 1.1:-58914176 MS.gene74867:CDS
GCGAGCCTGCCGGCGTCAGC+CGG 0.451266 1.1:+58917789 None:intergenic
ATTCCAGACGGCGTCGGAAT+CGG 0.451722 1.1:+58917737 None:intergenic
TCAAGAGCAAACCTAGAATC+AGG 0.451979 1.1:+58917363 None:intergenic
ATCCACCAAAATGACAATCT+TGG 0.472362 1.1:+58914388 None:intergenic
TTGAGCTTCTTAATGTGTGT+CGG 0.475730 1.1:-58914565 MS.gene74867:CDS
ATGATGATGAATATTGGAAC+TGG 0.476935 1.1:-58917395 MS.gene74867:CDS
CAACATACACTGAACTATGC+AGG 0.482554 1.1:-58914122 MS.gene74867:CDS
TATCCGGTGGAGTTATCAAT+TGG 0.483330 1.1:-58914434 MS.gene74867:CDS
GATGGTTATTATTGGAAGAG+AGG 0.491434 1.1:-58914191 MS.gene74867:CDS
CAACTCCGGCTGACGCCGGC+AGG 0.503540 1.1:-58917794 MS.gene74867:CDS
TGAAACGACGGCGAGCCTGC+CGG 0.503825 1.1:+58917779 None:intergenic
TAGATCTCTCGACATTGATT+GGG 0.508576 1.1:-58917421 MS.gene74867:CDS
TAAGAAGCTCAACAACTTCA+GGG 0.509003 1.1:+58914576 None:intergenic
GTAGGAATGTTGTCAAAGGA+AGG 0.515212 1.1:+58917663 None:intergenic
GAGTATTTGGAGACAAGGTA+AGG 0.516217 1.1:+58914516 None:intergenic
CAACAGAATATTAGGTAGCC+AGG 0.528414 1.1:-58914342 MS.gene74867:CDS
GACGGCGTCGGAATCGGCGG+CGG 0.529719 1.1:+58917743 None:intergenic
AGGAATAGAAGTTAGGCCTA+AGG 0.529851 1.1:-58914156 MS.gene74867:CDS
GTGTGTCGGCTTGAAATTTG+TGG 0.532858 1.1:-58914551 MS.gene74867:CDS
AGTATTACTGGAATAAAGGA+TGG 0.539464 1.1:-58914209 MS.gene74867:CDS
TATTAGAAGTGATGAGTGGT+TGG 0.541422 1.1:-58914288 MS.gene74867:CDS
ACGGCGGCGATGCACCCTTC+CGG 0.545479 1.1:+58917828 None:intergenic
AACATACACTGAACTATGCA+GGG 0.555404 1.1:-58914121 MS.gene74867:CDS
ATGATAAAGTCGAAGAATTG+GGG 0.556539 1.1:+58917696 None:intergenic
CGTCGGAATCGGCGGCGGAA+CGG 0.560951 1.1:+58917748 None:intergenic
CCAGACGGCGTCGGAATCGG+CGG 0.569931 1.1:+58917740 None:intergenic
TTTGGTAGGAATGTTGTCAA+AGG 0.578056 1.1:+58917659 None:intergenic
GGGAGCGTTTGAAGAGCTAC+CGG 0.580772 1.1:-58917847 MS.gene74867:CDS
GTTCAATTGGATAGAAAGAG+TGG 0.587294 1.1:-58917468 MS.gene74867:CDS
TGAGTGGTTGGAAACTGAGA+TGG 0.598787 1.1:-58914276 MS.gene74867:CDS
GAGTGGTTGGAAACTGAGAT+GGG 0.600436 1.1:-58914275 MS.gene74867:CDS
TTATCAATTGGTGTCGAAGG+TGG 0.604871 1.1:-58914422 MS.gene74867:CDS
AATGATTGGGTGATTAGAGA+GGG 0.608594 1.1:+58917620 None:intergenic
TGACAATCTTGGTTAAACAA+TGG 0.608788 1.1:+58914399 None:intergenic
CGTGCTCTCTCGTACAACTC+CGG 0.611520 1.1:-58917808 MS.gene74867:CDS
ACACCAATTGATAACTCCAC+CGG 0.615684 1.1:+58914431 None:intergenic
GAGTTATCAATTGGTGTCGA+AGG 0.620147 1.1:-58914425 MS.gene74867:CDS
GCGTTTGAAGAGCTACCGGA+AGG 0.626050 1.1:-58917843 MS.gene74867:CDS
TAATGATTGGGTGATTAGAG+AGG 0.630069 1.1:+58917619 None:intergenic
ATACAGAGTATTTGGAGACA+AGG 0.630777 1.1:+58914511 None:intergenic
CACCCAATCATTATCGACGA+TGG 0.633143 1.1:-58917609 MS.gene74867:CDS
CGGAGTTGTACGAGAGAGCA+CGG 0.633809 1.1:+58917809 None:intergenic
ATCCAGATGTAGAATGTAAG+CGG 0.640825 1.1:-58914367 MS.gene74867:CDS
AAAATGATTCCAGACGGCGT+CGG 0.652221 1.1:+58917731 None:intergenic
AGTATTTGGAGACAAGGTAA+GGG 0.654998 1.1:+58914517 None:intergenic
CGTACAACTCCGGCTGACGC+CGG 0.655374 1.1:-58917798 MS.gene74867:CDS
TGAGAATGAGAACTATCCGG+TGG 0.662141 1.1:-58914447 MS.gene74867:CDS
CGTTTGAAGAGCTACCGGAA+GGG 0.662619 1.1:-58917842 MS.gene74867:CDS
ACGGAGAAAATGATTCCAGA+CGG 0.677220 1.1:+58917725 None:intergenic
CTAGTATTAGAAGTGATGAG+TGG 0.690762 1.1:-58914292 MS.gene74867:CDS
TGATAAAGTCGAAGAATTGG+GGG 0.696278 1.1:+58917697 None:intergenic
ACATACACTGAACTATGCAG+GGG 0.716246 1.1:-58914120 MS.gene74867:CDS
AGTTGTACGAGAGAGCACGG+CGG 0.857068 1.1:+58917812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCATTTCAAAATAAAAT+TGG + chr1.1:58916334-58916353 None:intergenic 10.0%
!! AATGAAAAATAAATAGGATT+GGG + chr1.1:58915408-58915427 None:intergenic 15.0%
!! TCAATATGAAAAATAATGAA+TGG - chr1.1:58915036-58915055 MS.gene74867:intron 15.0%
!! TTATGCAATGAAAAATAAAT+AGG + chr1.1:58915414-58915433 None:intergenic 15.0%
!!! TATTTGAAACTTAATTAAAG+AGG + chr1.1:58915683-58915702 None:intergenic 15.0%
!! AGCATTAATATTCAAGAAAT+CGG + chr1.1:58914381-58914400 None:intergenic 20.0%
!! CAATGAAAAATAAATAGGAT+TGG + chr1.1:58915409-58915428 None:intergenic 20.0%
!! TAACTGATTGTGATAAAATT+TGG + chr1.1:58917224-58917243 None:intergenic 20.0%
!! TACAAAATATTGTGAAATAG+TGG + chr1.1:58915855-58915874 None:intergenic 20.0%
!! TTAAAGAGGAATAATTAAAG+AGG + chr1.1:58915669-58915688 None:intergenic 20.0%
!! TTTCTTTAATGTCATGAATT+GGG - chr1.1:58916076-58916095 MS.gene74867:intron 20.0%
!!! AAAAAAAAACTGCTATTTTC+GGG + chr1.1:58915813-58915832 None:intergenic 20.0%
!!! AAGATCATTTTTCATTTCAA+GGG - chr1.1:58916595-58916614 MS.gene74867:intron 20.0%
!!! ACAAGGAATACATTTAAAAT+CGG + chr1.1:58915990-58916009 None:intergenic 20.0%
!!! CTTATCTTTTTGTATCTTTT+GGG - chr1.1:58917319-58917338 MS.gene74867:intron 20.0%
!!! GAAAAAAAAACTGCTATTTT+CGG + chr1.1:58915814-58915833 None:intergenic 20.0%
!!! TCTTATCTTTTTGTATCTTT+TGG - chr1.1:58917318-58917337 MS.gene74867:intron 20.0%
!!! TTGGTCATTTTTTCTTAAAT+GGG + chr1.1:58916400-58916419 None:intergenic 20.0%
!!! TTTGGTCATTTTTTCTTAAA+TGG + chr1.1:58916401-58916420 None:intergenic 20.0%
!!! TTTTCATTGCATAATTTACT+TGG - chr1.1:58915420-58915439 MS.gene74867:intron 20.0%
! AAAGAAATCAATGCAAATGA+AGG + chr1.1:58915349-58915368 None:intergenic 25.0%
! AAAGAGGAATATCAAGAAAT+GGG + chr1.1:58915653-58915672 None:intergenic 25.0%
! AATGAGTATTACTGGAATAA+AGG - chr1.1:58917724-58917743 MS.gene74867:CDS 25.0%
! ATCAATTTGAACTTGAATGA+AGG + chr1.1:58915471-58915490 None:intergenic 25.0%
! CACATATTGTATGATATAAC+TGG - chr1.1:58916572-58916591 MS.gene74867:intron 25.0%
! CAGTTATATCATACAATATG+TGG + chr1.1:58916574-58916593 None:intergenic 25.0%
! CTTTCTTTAATGTCATGAAT+TGG - chr1.1:58916075-58916094 MS.gene74867:intron 25.0%
! GAATAAAGGATGGTTATTAT+TGG - chr1.1:58917738-58917757 MS.gene74867:CDS 25.0%
! GAATCCAAAATCTAATGATT+TGG + chr1.1:58915378-58915397 None:intergenic 25.0%
! TAAAGAGGAATATCAAGAAA+TGG + chr1.1:58915654-58915673 None:intergenic 25.0%
! TGATATGATTTAGTTATGCT+TGG - chr1.1:58917249-58917268 MS.gene74867:intron 25.0%
! TGGATATATGTCAAATTCAA+GGG + chr1.1:58916286-58916305 None:intergenic 25.0%
! TTAAAATCGGAAAAGAAAGT+TGG + chr1.1:58915977-58915996 None:intergenic 25.0%
! TTATTATTGTCTACCACAAA+CGG - chr1.1:58916540-58916559 MS.gene74867:intron 25.0%
! TTATTCCAGTAATACTCATT+TGG + chr1.1:58917724-58917743 None:intergenic 25.0%
! TTCAGATCAAAAAGCTAATT+TGG + chr1.1:58916419-58916438 None:intergenic 25.0%
! TTGAATAAAAGAGAGTTTCA+AGG + chr1.1:58915020-58915039 None:intergenic 25.0%
! TTGTAACAGCTAATATAACT+TGG - chr1.1:58917181-58917200 MS.gene74867:intron 25.0%
!! AATGTATTCCTTGTTATGTA+TGG - chr1.1:58915996-58916015 MS.gene74867:intron 25.0%
!! AGTATGTCATGTCTTTTTAT+GGG - chr1.1:58914931-58914950 MS.gene74867:intron 25.0%
!! ATAAAGTATCAGAATGTAGT+CGG - chr1.1:58915700-58915719 MS.gene74867:intron 25.0%
!! ATGTATTCCTTGTTATGTAT+GGG - chr1.1:58915997-58916016 MS.gene74867:intron 25.0%
!! ATGTGCCTAAACATATTTTA+AGG - chr1.1:58914863-58914882 MS.gene74867:intron 25.0%
!! TAAAGTGGAATCTGATATTT+TGG + chr1.1:58917126-58917145 None:intergenic 25.0%
!! TGATCCAAATCATTAGATTT+TGG - chr1.1:58915371-58915390 MS.gene74867:intron 25.0%
!!! AAAAAAAACTGCTATTTTCG+GGG + chr1.1:58915812-58915831 None:intergenic 25.0%
!!! GAAGATCATTTTTCATTTCA+AGG - chr1.1:58916594-58916613 MS.gene74867:intron 25.0%
!!! TTTAACCAAGATTGTCATTT+TGG - chr1.1:58917544-58917563 MS.gene74867:intron 25.0%
AAATATGTTTAGGCACATGA+TGG + chr1.1:58914861-58914880 None:intergenic 30.0%
AACAATACTGAAAACCAACT+TGG + chr1.1:58917101-58917120 None:intergenic 30.0%
AAGATTGGAGGAAAATAAAG+TGG + chr1.1:58917141-58917160 None:intergenic 30.0%
ACAATACTGAAAACCAACTT+GGG + chr1.1:58917100-58917119 None:intergenic 30.0%
ACTCAGAATTATAGTAGTGT+TGG + chr1.1:58916447-58916466 None:intergenic 30.0%
AGATGATAAAGTCGAAGAAT+TGG + chr1.1:58914246-58914265 None:intergenic 30.0%
AGTATTACTGGAATAAAGGA+TGG - chr1.1:58917728-58917747 MS.gene74867:CDS 30.0%
ATGATAAAGTCGAAGAATTG+GGG + chr1.1:58914244-58914263 None:intergenic 30.0%
ATGGATCAAGTAAATGGAAT+AGG + chr1.1:58915523-58915542 None:intergenic 30.0%
ATGTTACAATGCCAATGAAT+TGG - chr1.1:58916168-58916187 MS.gene74867:intron 30.0%
ATTCCATTTACTTGATCCAT+TGG - chr1.1:58915523-58915542 MS.gene74867:intron 30.0%
ATTTGGACACAAGAGATAAA+TGG + chr1.1:58915286-58915305 None:intergenic 30.0%
CAAGTAAATGGAATAGGTAT+AGG + chr1.1:58915517-58915536 None:intergenic 30.0%
CACAGAAATACAAATTCTAC+TGG + chr1.1:58914644-58914663 None:intergenic 30.0%
CTCAGAATTATAGTAGTGTT+GGG + chr1.1:58916446-58916465 None:intergenic 30.0%
CTTCTTCACTAACTTCAATT+TGG + chr1.1:58915083-58915102 None:intergenic 30.0%
GAGAGCCTTAAAATATGTTT+AGG + chr1.1:58914871-58914890 None:intergenic 30.0%
GATGATAAAGTCGAAGAATT+GGG + chr1.1:58914245-58914264 None:intergenic 30.0%
GATTCTATTTCCTATGTAAG+TGG - chr1.1:58914961-58914980 MS.gene74867:intron 30.0%
GGATGAGGAACATAAAAATT+TGG - chr1.1:58917036-58917055 MS.gene74867:intron 30.0%
GTGGATATATGTCAAATTCA+AGG + chr1.1:58916287-58916306 None:intergenic 30.0%
TAATGAATGGTTGAATATGC+TGG - chr1.1:58915049-58915068 MS.gene74867:intron 30.0%
TCACATAAGCAGGAAAAATT+AGG + chr1.1:58916686-58916705 None:intergenic 30.0%
TCTATCCACAATTATTGTGA+GGG - chr1.1:58917014-58917033 MS.gene74867:intron 30.0%
TCTTGTGTCCAAATTTAACT+TGG - chr1.1:58915292-58915311 MS.gene74867:intron 30.0%
TGACAATCTTGGTTAAACAA+TGG + chr1.1:58917541-58917560 None:intergenic 30.0%
TGATGTGAAATTCCATTAGT+TGG + chr1.1:58916211-58916230 None:intergenic 30.0%
TTCTATCCACAATTATTGTG+AGG - chr1.1:58917013-58917032 MS.gene74867:intron 30.0%
TTGTACTAGATAACGTATTG+CGG - chr1.1:58915870-58915889 MS.gene74867:intron 30.0%
TTGTCCTCTTGATATTTGAA+CGG - chr1.1:58916898-58916917 MS.gene74867:intron 30.0%
TTGTTGAAGGAATAGAAGTT+AGG - chr1.1:58917774-58917793 MS.gene74867:CDS 30.0%
TTTGGACACAAGAGATAAAT+GGG + chr1.1:58915285-58915304 None:intergenic 30.0%
! ATCTAAATACTTTGTTGTCC+TGG + chr1.1:58917616-58917635 None:intergenic 30.0%
! ATGATGATGAATATTGGAAC+TGG - chr1.1:58914542-58914561 MS.gene74867:CDS 30.0%
! GAGTATGTCATGTCTTTTTA+TGG - chr1.1:58914930-58914949 MS.gene74867:intron 30.0%
! TAAAGTATCAGAATGTAGTC+GGG - chr1.1:58915701-58915720 MS.gene74867:intron 30.0%
! TAAGTTGCATACAGAGTATT+TGG + chr1.1:58917437-58917456 None:intergenic 30.0%
! TATCTTTTGGGCACAAATTT+TGG - chr1.1:58917331-58917350 MS.gene74867:intron 30.0%
! TCACTGTTATGAAAAAGCAT+AGG + chr1.1:58916490-58916509 None:intergenic 30.0%
!! TGTCCAAATTTAACTTGGAA+TGG - chr1.1:58915297-58915316 MS.gene74867:intron 30.0%
!! TTTTGAGAATGAGAACTATC+CGG - chr1.1:58917487-58917506 MS.gene74867:intron 30.0%
!!! AGATAGAGAGATTTTTTGGT+AGG + chr1.1:58914295-58914314 None:intergenic 30.0%
!!! CATTTTTTCTTAAATGGGAG+AGG + chr1.1:58916395-58916414 None:intergenic 30.0%
AAAAGAGAGTTTCAAGGATG+AGG + chr1.1:58915014-58915033 None:intergenic 35.0%
AAAGAGAGTTTCAAGGATGA+GGG + chr1.1:58915013-58915032 None:intergenic 35.0%
AACATACACTGAACTATGCA+GGG - chr1.1:58917816-58917835 MS.gene74867:CDS 35.0%
AAGAGAGGTTTCTTTGTTGA+AGG - chr1.1:58917761-58917780 MS.gene74867:CDS 35.0%
AATGATTGGGTGATTAGAGA+GGG + chr1.1:58914320-58914339 None:intergenic 35.0%
ACAAGAAGTTTCACATAAGC+AGG + chr1.1:58916696-58916715 None:intergenic 35.0%
ACATCTTCTTCCTCACAAAA+AGG + chr1.1:58917066-58917085 None:intergenic 35.0%
ACCAGTTAAAGCCAATTCAT+TGG + chr1.1:58916182-58916201 None:intergenic 35.0%
AGTATTTGGAGACAAGGTAA+GGG + chr1.1:58917423-58917442 None:intergenic 35.0%
ATAACCGATGTTGTCAATTG+TGG - chr1.1:58915784-58915803 MS.gene74867:intron 35.0%
ATAAGAAACAGAAGCAATGC+AGG + chr1.1:58917304-58917323 None:intergenic 35.0%
ATCCACCAAAATGACAATCT+TGG + chr1.1:58917552-58917571 None:intergenic 35.0%
ATCCAGATGTAGAATGTAAG+CGG - chr1.1:58917570-58917589 MS.gene74867:intron 35.0%
ATGTCAAATTCAAGGGATGT+TGG + chr1.1:58916279-58916298 None:intergenic 35.0%
CAAATTCTACTGGAGTAACA+TGG + chr1.1:58914634-58914653 None:intergenic 35.0%
CACTCATCACTTCTAATACT+AGG + chr1.1:58917647-58917666 None:intergenic 35.0%
CATTATCGACGATGGTAAAA+AGG - chr1.1:58914336-58914355 MS.gene74867:CDS 35.0%
CTAGTATTAGAAGTGATGAG+TGG - chr1.1:58917645-58917664 MS.gene74867:CDS 35.0%
CTATCCACAATTATTGTGAG+GGG - chr1.1:58917015-58917034 MS.gene74867:intron 35.0%
CTTGTGTTCAAGATGATTGA+TGG - chr1.1:58917458-58917477 MS.gene74867:CDS 35.0%
GAAGTCCAAATGAGTATTAC+TGG - chr1.1:58917716-58917735 MS.gene74867:CDS 35.0%
GATCCAATGGATCAAGTAAA+TGG + chr1.1:58915529-58915548 None:intergenic 35.0%
GATGGTTATTATTGGAAGAG+AGG - chr1.1:58917746-58917765 MS.gene74867:CDS 35.0%
GCTCCATTCCAAGTTAAATT+TGG + chr1.1:58915303-58915322 None:intergenic 35.0%
GTGAAATTCCATTAGTTGGA+AGG + chr1.1:58916207-58916226 None:intergenic 35.0%
GTGAATAGTTAACTAAGGGA+TGG + chr1.1:58916728-58916747 None:intergenic 35.0%
GTTCAAATATCAAGAGGACA+AGG + chr1.1:58916899-58916918 None:intergenic 35.0%
GTTCAATTGGATAGAAAGAG+TGG - chr1.1:58914469-58914488 MS.gene74867:CDS 35.0%
TAACAGACCCATACATAACA+AGG + chr1.1:58916007-58916026 None:intergenic 35.0%
TAAGAAGCTCAACAACTTCA+GGG + chr1.1:58917364-58917383 None:intergenic 35.0%
TAATGATTGGGTGATTAGAG+AGG + chr1.1:58914321-58914340 None:intergenic 35.0%
TACCATCGTCGATAATGATT+GGG + chr1.1:58914333-58914352 None:intergenic 35.0%
TACTGGAGTAACATGGTAAT+AGG + chr1.1:58914627-58914646 None:intergenic 35.0%
TATTAGAAGTGATGAGTGGT+TGG - chr1.1:58917649-58917668 MS.gene74867:CDS 35.0%
TCGGGTGAATAGTTAACTAA+GGG + chr1.1:58916732-58916751 None:intergenic 35.0%
TGAAGAGAAATATCAGACAG+TGG + chr1.1:58916784-58916803 None:intergenic 35.0%
TGAAGTTAGTGAAGAAGCTT+TGG - chr1.1:58915086-58915105 MS.gene74867:intron 35.0%
TGATAAAGTCGAAGAATTGG+GGG + chr1.1:58914243-58914262 None:intergenic 35.0%
TGTGGATAGAATAACACATG+AGG + chr1.1:58917004-58917023 None:intergenic 35.0%
TTAAGAAGCTCAACAACTTC+AGG + chr1.1:58917365-58917384 None:intergenic 35.0%
TTACCATCGTCGATAATGAT+TGG + chr1.1:58914334-58914353 None:intergenic 35.0%
TTCGGGTGAATAGTTAACTA+AGG + chr1.1:58916733-58916752 None:intergenic 35.0%
TTGAGCTTCTTAATGTGTGT+CGG - chr1.1:58917372-58917391 MS.gene74867:intron 35.0%
TTTGGTAGGAATGTTGTCAA+AGG + chr1.1:58914281-58914300 None:intergenic 35.0%
! ATACAGAGTATTTGGAGACA+AGG + chr1.1:58917429-58917448 None:intergenic 35.0%
! ATTTGGATGTCCTTTTTGTG+AGG - chr1.1:58917053-58917072 MS.gene74867:intron 35.0%
! GGGATGATGATGATGAATAT+TGG - chr1.1:58914536-58914555 MS.gene74867:CDS 35.0%
! TACTACGTGTTGTTGAATAG+CGG + chr1.1:58915949-58915968 None:intergenic 35.0%
! TACTCAGCTTTGATCAGTAA+TGG + chr1.1:58914915-58914934 None:intergenic 35.0%
! TAGATCTCTCGACATTGATT+GGG - chr1.1:58914516-58914535 MS.gene74867:CDS 35.0%
! TATTTTCCTCCAATCTTGAG+AGG - chr1.1:58917144-58917163 MS.gene74867:intron 35.0%
! TGAAATTCAGAGCGTTCAAT+TGG - chr1.1:58914456-58914475 MS.gene74867:CDS 35.0%
! TGTTGTTTACTGTCTTCCTT+AGG + chr1.1:58917800-58917819 None:intergenic 35.0%
! TTCAAGATGATTGATGGCTT+TGG - chr1.1:58917464-58917483 MS.gene74867:CDS 35.0%
!!! AACCAAGATTGTCATTTTGG+TGG - chr1.1:58917547-58917566 MS.gene74867:intron 35.0%
!!! ACGGAAAGTTTTTGAAACGA+CGG + chr1.1:58914173-58914192 None:intergenic 35.0%
!!! GGCAAGATAGAGAGATTTTT+TGG + chr1.1:58914299-58914318 None:intergenic 35.0%
AAGAGAGTTTCAAGGATGAG+GGG + chr1.1:58915012-58915031 None:intergenic 40.0%
AAGCGGCTCAACAGAATATT+AGG - chr1.1:58917587-58917606 MS.gene74867:intron 40.0%
ACAATTATTGTGAGGGGATG+AGG - chr1.1:58917021-58917040 MS.gene74867:intron 40.0%
ACATACACTGAACTATGCAG+GGG - chr1.1:58917817-58917836 MS.gene74867:CDS 40.0%
ACGGAGAAAATGATTCCAGA+CGG + chr1.1:58914215-58914234 None:intergenic 40.0%
AGGAATAGAAGTTAGGCCTA+AGG - chr1.1:58917781-58917800 MS.gene74867:CDS 40.0%
AGTCCATGAAGAAGCTGAAT+AGG - chr1.1:58916978-58916997 MS.gene74867:intron 40.0%
ATGGGAGAGTTCTTCATTTC+AGG - chr1.1:58917680-58917699 MS.gene74867:CDS 40.0%
CAACAGAATATTAGGTAGCC+AGG - chr1.1:58917595-58917614 MS.gene74867:intron 40.0%
CAACATACACTGAACTATGC+AGG - chr1.1:58917815-58917834 MS.gene74867:CDS 40.0%
CAGTAACTGACCACTTACAT+AGG + chr1.1:58914974-58914993 None:intergenic 40.0%
CTAGATCTCTCGACATTGAT+TGG - chr1.1:58914515-58914534 MS.gene74867:CDS 40.0%
CTCATTTGGACTTCTTCATC+TGG + chr1.1:58917710-58917729 None:intergenic 40.0%
GAAGTGAGAGAAGCTGAAAA+TGG + chr1.1:58916652-58916671 None:intergenic 40.0%
GAGTATTTGGAGACAAGGTA+AGG + chr1.1:58917424-58917443 None:intergenic 40.0%
GGAAATTCAGTGTGACTTGA+GGG + chr1.1:58915632-58915651 None:intergenic 40.0%
GGATCCACAATTGACAACAT+CGG + chr1.1:58915791-58915810 None:intergenic 40.0%
GGTCTGTTAGCTAAACAACA+TGG - chr1.1:58916018-58916037 MS.gene74867:intron 40.0%
GTAGGAATGTTGTCAAAGGA+AGG + chr1.1:58914277-58914296 None:intergenic 40.0%
TATATCCACTGTTTCAGCCT+CGG - chr1.1:58916298-58916317 MS.gene74867:intron 40.0%
TATCCGGTGGAGTTATCAAT+TGG - chr1.1:58917503-58917522 MS.gene74867:intron 40.0%
TCAAGAGCAAACCTAGAATC+AGG + chr1.1:58914577-58914596 None:intergenic 40.0%
TCATCCCCTCACAATAATTG+TGG + chr1.1:58917022-58917041 None:intergenic 40.0%
TTCGCCGTTCAAATATCAAG+AGG + chr1.1:58916905-58916924 None:intergenic 40.0%
TTGTTGAATAGCGGCTATAG+CGG + chr1.1:58915940-58915959 None:intergenic 40.0%
! ACACCAATTGATAACTCCAC+CGG + chr1.1:58917509-58917528 None:intergenic 40.0%
! ACTGGTTTCCTTCCAACTAA+TGG - chr1.1:58916196-58916215 MS.gene74867:intron 40.0%
! TTTGGGCACAAATTTTGGAC+AGG - chr1.1:58917336-58917355 MS.gene74867:intron 40.0%
!! GAGTTATCAATTGGTGTCGA+AGG - chr1.1:58917512-58917531 MS.gene74867:intron 40.0%
!! GCCAATGAATTGGCTTTAAC+TGG - chr1.1:58916178-58916197 MS.gene74867:intron 40.0%
!! TACATGGGGACTCATTTTTC+TGG + chr1.1:58916870-58916889 None:intergenic 40.0%
!! TTATCAATTGGTGTCGAAGG+TGG - chr1.1:58917515-58917534 MS.gene74867:intron 40.0%
AAAATGATTCCAGACGGCGT+CGG + chr1.1:58914209-58914228 None:intergenic 45.0%
AAAGTCGAAGAATTGGGGGT+CGG + chr1.1:58914239-58914258 None:intergenic 45.0%
AGACTCCATATTCCAAGCCA+CGG + chr1.1:58915199-58915218 None:intergenic 45.0%
AGAGTGAGAGGAAATGCATC+TGG + chr1.1:58916139-58916158 None:intergenic 45.0%
AGCACATTAAGTCAGACCAG+TGG - chr1.1:58915152-58915171 MS.gene74867:intron 45.0%
AGCAGTTGGCAAGGAAGATT+GGG - chr1.1:58915565-58915584 MS.gene74867:intron 45.0%
AGCCGCTTACATTCTACATC+TGG + chr1.1:58917575-58917594 None:intergenic 45.0%
AGGACAAGGCTCGTATACAT+GGG + chr1.1:58916885-58916904 None:intergenic 45.0%
AGGCCTATTCAGCTTCTTCA+TGG + chr1.1:58916984-58917003 None:intergenic 45.0%
ATTCACCCGAATGTGAACCT+CGG - chr1.1:58916742-58916761 MS.gene74867:intron 45.0%
CACCCAATCATTATCGACGA+TGG - chr1.1:58914328-58914347 MS.gene74867:CDS 45.0%
CAGGCTCATCAGCTAAACTT+TGG + chr1.1:58917285-58917304 None:intergenic 45.0%
CATCTGAAAGACAGAGTGAG+AGG + chr1.1:58916151-58916170 None:intergenic 45.0%
CATTAAGTCAGACCAGTGGT+TGG - chr1.1:58915156-58915175 MS.gene74867:intron 45.0%
CCAACACTAGTAACAGAACC+GGG - chr1.1:58914782-58914801 MS.gene74867:intron 45.0%
CGGAATGATGAAGGATCCAA+TGG + chr1.1:58915542-58915561 None:intergenic 45.0%
CTGTTACCGAGGTTCACATT+CGG + chr1.1:58916751-58916770 None:intergenic 45.0%
GAGATAAATGGGTCGAGAGA+TGG + chr1.1:58915274-58915293 None:intergenic 45.0%
GAGGAGAATAGCAGTAGAGA+TGG + chr1.1:58916362-58916381 None:intergenic 45.0%
GAGTGGTTGGAAACTGAGAT+GGG - chr1.1:58917662-58917681 MS.gene74867:CDS 45.0%
GCCAACACTAGTAACAGAAC+CGG - chr1.1:58914781-58914800 MS.gene74867:intron 45.0%
GGGAAATTCAGTGTGACTTG+AGG + chr1.1:58915633-58915652 None:intergenic 45.0%
GGTTATGAGCATGGTAGACT+TGG + chr1.1:58915611-58915630 None:intergenic 45.0%
GTCTACCACAAACGGTGAAA+AGG - chr1.1:58916548-58916567 MS.gene74867:intron 45.0%
TCAGAAACTTGTCCAACCAC+TGG + chr1.1:58915171-58915190 None:intergenic 45.0%
TGACTTGAGGGTTATGAGCA+TGG + chr1.1:58915620-58915639 None:intergenic 45.0%
TGAGAATGAGAACTATCCGG+TGG - chr1.1:58917490-58917509 MS.gene74867:intron 45.0%
TGAGTGGTTGGAAACTGAGA+TGG - chr1.1:58917661-58917680 MS.gene74867:CDS 45.0%
TGGGAGAGGTAACTATGTTG+AGG + chr1.1:58916381-58916400 None:intergenic 45.0%
TGTTACCGAGGTTCACATTC+GGG + chr1.1:58916750-58916769 None:intergenic 45.0%
TTTCCTCCAATCTTGAGAGG+AGG - chr1.1:58917147-58917166 MS.gene74867:intron 45.0%
TTTGAACGGCGAACTTGACT+AGG - chr1.1:58916912-58916931 MS.gene74867:intron 45.0%
! GTAGTCGGGAATCTAGAGTT+GGG - chr1.1:58915715-58915734 MS.gene74867:intron 45.0%
! TAACTTGGAATGGAGCACTC+TGG - chr1.1:58915307-58915326 MS.gene74867:intron 45.0%
! TGTAGTCGGGAATCTAGAGT+TGG - chr1.1:58915714-58915733 MS.gene74867:intron 45.0%
!! GTGTGTCGGCTTGAAATTTG+TGG - chr1.1:58917386-58917405 MS.gene74867:CDS 45.0%
!! AAATATTAAAAAAAAAAAGA+AGG - chr1.1:58915760-58915779 MS.gene74867:intron 5.0%
ACAAGTTTCTGATGCCACCG+TGG - chr1.1:58915179-58915198 MS.gene74867:intron 50.0%
ACTGCTGTGCGGAATGATGA+AGG + chr1.1:58915551-58915570 None:intergenic 50.0%
CAGCAGTTGGCAAGGAAGAT+TGG - chr1.1:58915564-58915583 MS.gene74867:intron 50.0%
CCCGGTTCTGTTACTAGTGT+TGG + chr1.1:58914785-58914804 None:intergenic 50.0%
CGAGAGATGGATGTGTGCTT+TGG + chr1.1:58915261-58915280 None:intergenic 50.0%
CGTTTGAAGAGCTACCGGAA+GGG - chr1.1:58914095-58914114 MS.gene74867:CDS 50.0%
CTCAAATGACAGCAGAGCTC+TGG + chr1.1:58914822-58914841 None:intergenic 50.0%
GAAATGCATCTGGCCAGCAA+AGG + chr1.1:58916129-58916148 None:intergenic 50.0%
GAGGACAAGGCTCGTATACA+TGG + chr1.1:58916886-58916905 None:intergenic 50.0%
GATCACCATCACTGTTACCG+AGG + chr1.1:58916762-58916781 None:intergenic 50.0%
GCAGTTGGCAAGGAAGATTG+GGG - chr1.1:58915566-58915585 MS.gene74867:intron 50.0%
GGACAAGGCTCGTATACATG+GGG + chr1.1:58916884-58916903 None:intergenic 50.0%
GGACTGCTATGCCTGATTCT+AGG - chr1.1:58914563-58914582 MS.gene74867:CDS 50.0%
GTCTGTTGTCGTTCCCAAGT+TGG - chr1.1:58917084-58917103 MS.gene74867:intron 50.0%
GTGAACCTCGGTAACAGTGA+TGG - chr1.1:58916754-58916773 MS.gene74867:intron 50.0%
GTGGGATGACTTGACGACAA+CGG + chr1.1:58914733-58914752 None:intergenic 50.0%
TCATCATTCCGCACAGCAGT+TGG - chr1.1:58915551-58915570 MS.gene74867:intron 50.0%
TGTTGGCAGTCCAACTTCGT+GGG + chr1.1:58914768-58914787 None:intergenic 50.0%
! CAGAGCTCTGCTGTCATTTG+AGG - chr1.1:58914820-58914839 MS.gene74867:intron 50.0%
! TATGCAGGGGTCTTGTGTCT+TGG - chr1.1:58917830-58917849 MS.gene74867:CDS 50.0%
! TGTGGCCTTTTCACCGTTTG+TGG + chr1.1:58916556-58916575 None:intergenic 50.0%
! TTAGGCACATGATGGCGCAT+CGG + chr1.1:58914853-58914872 None:intergenic 50.0%
!! GGGGAGAGTGTTGTTCATTG+TGG - chr1.1:58915585-58915604 MS.gene74867:intron 50.0%
AACAGCCGAGGCTGAAACAG+TGG + chr1.1:58916306-58916325 None:intergenic 55.0%
ACCACTACCACCCACGAAGT+TGG - chr1.1:58914755-58914774 MS.gene74867:intron 55.0%
ACTGTTTCAGCCTCGGCTGT+TGG - chr1.1:58916305-58916324 MS.gene74867:intron 55.0%
ATGCATCTGGCCAGCAAAGG+TGG + chr1.1:58916126-58916145 None:intergenic 55.0%
ATTCCGCACAGCAGTTGGCA+AGG - chr1.1:58915556-58915575 MS.gene74867:intron 55.0%
CCTCCAATCTTGAGAGGAGG+CGG - chr1.1:58917150-58917169 MS.gene74867:intron 55.0%
CGAAGAATTGGGGGTCGGAA+CGG + chr1.1:58914234-58914253 None:intergenic 55.0%
CGGAGTTGTACGAGAGAGCA+CGG + chr1.1:58914131-58914150 None:intergenic 55.0%
CGTGCTCTCTCGTACAACTC+CGG - chr1.1:58914129-58914148 MS.gene74867:CDS 55.0%
CTCCAATCTTGAGAGGAGGC+GGG - chr1.1:58917151-58917170 MS.gene74867:intron 55.0%
CTCCATATTCCAAGCCACGG+TGG + chr1.1:58915196-58915215 None:intergenic 55.0%
CTGGCAATGAAGAGATCGCC+CGG + chr1.1:58914803-58914822 None:intergenic 55.0%
CTGTTTCAGCCTCGGCTGTT+GGG - chr1.1:58916306-58916325 MS.gene74867:intron 55.0%
CTTCCTTGCCAACTGCTGTG+CGG + chr1.1:58915562-58915581 None:intergenic 55.0%
GCAAAGGTGGGCACATGGTA+TGG + chr1.1:58916113-58916132 None:intergenic 55.0%
GCGTTTGAAGAGCTACCGGA+AGG - chr1.1:58914094-58914113 MS.gene74867:CDS 55.0%
TACCATGTGCCCACCTTTGC+TGG - chr1.1:58916113-58916132 MS.gene74867:intron 55.0%
TCCAACTTCGTGGGTGGTAG+TGG + chr1.1:58914759-58914778 None:intergenic 55.0%
TCCAATCTTGAGAGGAGGCG+GGG - chr1.1:58917152-58917171 MS.gene74867:intron 55.0%
TGCATCTGGCCAGCAAAGGT+GGG + chr1.1:58916125-58916144 None:intergenic 55.0%
TTTCTGATGCCACCGTGGCT+TGG - chr1.1:58915184-58915203 MS.gene74867:intron 55.0%
! AAATTGGTGCCCAACAGCCG+AGG + chr1.1:58916318-58916337 None:intergenic 55.0%
! ACATGATGGCGCATCGGCAT+CGG + chr1.1:58914847-58914866 None:intergenic 55.0%
! AGTTGTACGAGAGAGCACGG+CGG + chr1.1:58914128-58914147 None:intergenic 55.0%
! ATTCCAGACGGCGTCGGAAT+CGG + chr1.1:58914203-58914222 None:intergenic 55.0%
! GTGTTGGCAGTCCAACTTCG+TGG + chr1.1:58914769-58914788 None:intergenic 55.0%
! TGCCACCGTGGCTTGGAATA+TGG - chr1.1:58915191-58915210 MS.gene74867:intron 55.0%
!! ACTTCGTGGGTGGTAGTGGT+TGG + chr1.1:58914755-58914774 None:intergenic 55.0%
!! GGGAGCGTTTGAAGAGCTAC+CGG - chr1.1:58914090-58914109 MS.gene74867:CDS 55.0%
ACCCCGCCTCCTCTCAAGAT+TGG + chr1.1:58917156-58917175 None:intergenic 60.0%
CCGCCTCCTCTCAAGATTGG+AGG + chr1.1:58917153-58917172 None:intergenic 60.0%
TGGCAGTCCAACTTCGTGGG+TGG + chr1.1:58914765-58914784 None:intergenic 60.0%
!! CGTGGGTGGTAGTGGTTGGT+GGG + chr1.1:58914751-58914770 None:intergenic 60.0%
!! TCGTGGGTGGTAGTGGTTGG+TGG + chr1.1:58914752-58914771 None:intergenic 60.0%
CGTACAACTCCGGCTGACGC+CGG - chr1.1:58914139-58914158 MS.gene74867:CDS 65.0%
GGCCAGCAAAGGTGGGCACA+TGG + chr1.1:58916118-58916137 None:intergenic 65.0%
TGAAACGACGGCGAGCCTGC+CGG + chr1.1:58914161-58914180 None:intergenic 65.0%
ACGGCGGCGATGCACCCTTC+CGG + chr1.1:58914112-58914131 None:intergenic 70.0%
CGTCGGAATCGGCGGCGGAA+CGG + chr1.1:58914192-58914211 None:intergenic 70.0%
! CCAGACGGCGTCGGAATCGG+CGG + chr1.1:58914200-58914219 None:intergenic 70.0%
CAACTCCGGCTGACGCCGGC+AGG - chr1.1:58914143-58914162 MS.gene74867:CDS 75.0%
! GACGGCGTCGGAATCGGCGG+CGG + chr1.1:58914197-58914216 None:intergenic 75.0%
!! CCGCCGATTCCGACGCCGTC+TGG - chr1.1:58914197-58914216 MS.gene74867:CDS 75.0%
! GCGAGCCTGCCGGCGTCAGC+CGG + chr1.1:58914151-58914170 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 58914088 58917871 58914088 ID=MS.gene74867
chr1.1 mRNA 58914088 58917871 58914088 ID=MS.gene74867.t1;Parent=MS.gene74867
chr1.1 exon 58917602 58917871 58917602 ID=MS.gene74867.t1.exon1;Parent=MS.gene74867.t1
chr1.1 CDS 58917602 58917871 58917602 ID=cds.MS.gene74867.t1;Parent=MS.gene74867.t1
chr1.1 exon 58917375 58917493 58917375 ID=MS.gene74867.t1.exon2;Parent=MS.gene74867.t1
chr1.1 CDS 58917375 58917493 58917375 ID=cds.MS.gene74867.t1;Parent=MS.gene74867.t1
chr1.1 exon 58914088 58914601 58914088 ID=MS.gene74867.t1.exon3;Parent=MS.gene74867.t1
chr1.1 CDS 58914088 58914601 58914088 ID=cds.MS.gene74867.t1;Parent=MS.gene74867.t1
Gene Sequence

>MS.gene74867

ATGGGAGCGTTTGAAGAGCTACCGGAAGGGTGCATCGCCGCCGTGCTCTCTCGTACAACTCCGGCTGACGCCGGCAGGCTCGCCGTCGTTTCAAAAACTTTCCGTTCCGCCGCCGATTCCGACGCCGTCTGGAATCATTTTCTCCGTTCCGACCCCCAATTCTTCGACTTTATCATCTCAAACTCTCCTTCCTTTGACAACATTCCTACCAAAAAATCTCTCTATCTTGCCCTCTCTAATCACCCAATCATTATCGACGATGGTAAAAAGGTATCATTCTTCGTCAATCACCGATTTCTTGAATATTAATGCTTATTATCATTGACTGATTAGTAATTAATTTGAATTGAATTAATTGTTGTATATGTTGAAATTCAGAGCGTTCAATTGGATAGAAAGAGTGGAAAAAAGTGTGTGATGCTTGCTGCTAGATCTCTCGACATTGATTGGGATGATGATGATGAATATTGGAACTGGACTGCTATGCCTGATTCTAGGTTTGCTCTTGAACTTTTCTATTTGTTTAACTGTTCTTACCTATTACCATGTTACTCCAGTAGAATTTGTATTTCTGTGTAATGTATGTGTGTCTAGACATAGCACATGAATTTCACTTAATGCTAATTGAACATAATTGTTTAACCGTTGTCGTCAAGTCATCCCACCAACCACTACCACCCACGAAGTTGGACTGCCAACACTAGTAACAGAACCGGGCGATCTCTTCATTGCCAGAGCTCTGCTGTCATTTGAGGTCCGATGCCGATGCGCCATCATGTGCCTAAACATATTTTAAGGCTCTCTCTTTCGAAAGTCGAATCAAGCCATTACTGATCAAAGCTGAGTATGTCATGTCTTTTTATGGGCTTGAATGATTCTATTTCCTATGTAAGTGGTCAGTTACTGTTGATTGATCATGTTCCCCTCATCCTTGAAACTCTCTTTTATTCAATATGAAAAATAATGAATGGTTGAATATGCTGGTGAAACTTCCAAATTGAAGTTAGTGAAGAAGCTTTGGTCAGTTAGTGCTCAATGTGTTGTTCTACTTCATTCAAGTTTAAAGCACATTAAGTCAGACCAGTGGTTGGACAAGTTTCTGATGCCACCGTGGCTTGGAATATGGAGTCTATACTCTATTCTGTCACTTTGCTTCAGTCAGCTAAGTTTCCAAAGCACACATCCATCTCTCGACCCATTTATCTCTTGTGTCCAAATTTAACTTGGAATGGAGCACTCTGGTCTTTCATCTTATAGTCCTTCATTTGCATTGATTTCTTTCTTGATCCAAATCATTAGATTTTGGATTCTATGACACCCAATCCTATTTATTTTTCATTGCATAATTTACTTGGTATGAATTGTGTTCACTTTTCAGTTCCTTCATTCAAGTTCAAATTGATTTCTCTTAATTCATTGCTATAAACCTATACCTATTCCATTTACTTGATCCATTGGATCCTTCATCATTCCGCACAGCAGTTGGCAAGGAAGATTGGGGAGAGTGTTGTTCATTGTGGCCAAGTCTACCATGCTCATAACCCTCAAGTCACACTGAATTTCCCATTTCTTGATATTCCTCTTTAATTATTCCTCTTTAATTAAGTTTCAAATAAAGTATCAGAATGTAGTCGGGAATCTAGAGTTGGGCATTTGTCTTCAAAATGTTTTTAAATATTAAAAAAAAAAAGAAGGTATAACCGATGTTGTCAATTGTGGATCCCCGAAAATAGCAGTTTTTTTTTCTTTCAAATTCTGCTATAGCCACTATTTCACAATATTTTGTACTAGATAACGTATTGCGGAACAATTGCGATTTGTTCAGATTCTGCGCAGTAGTGTTATAGCACCGCTATAGCCGCTATTCAACAACACGTAGTATAACACCAACTTTCTTTTCCGATTTTAAATGTATTCCTTGTTATGTATGGGTCTGTTAGCTAAACAACATGGACTTTCATTTTATGTAAATAATAACTCATTTGTTCTTTCTTTAATGTCATGAATTGGGATGTTCGAAGTCCATACCATGTGCCCACCTTTGCTGGCCAGATGCATTTCCTCTCACTCTGTCTTTCAGATGTTACAATGCCAATGAATTGGCTTTAACTGGTTTCCTTCCAACTAATGGAATTTCACATCAATTTTTAAGTGTAAGACTGTAATTTAAATATGTTGAGAATAAACACCAACATCCCTTGAATTTGACATATATCCACTGTTTCAGCCTCGGCTGTTGGGCACCAATTTTATTTTGAAATGATTTATTCTCCATCTCTACTGCTATTCTCCTCAACATAGTTACCTCTCCCATTTAAGAAAAAATGACCAAATTAGCTTTTTGATCTGAAGTCTCCCAACACTACTATAATTCTGAGTTTTTAGCTTTTTATGCTGTGCCTATGCTTTTTCATAACAGTGAGATAAGTTCTCTGATAGCAACATTACTGCATTATTATTGTCTACCACAAACGGTGAAAAGGCCACATATTGTATGATATAACTGGAAGATCATTTTTCATTTCAAGGGATGTAAAGTTGAATGAAACTAATAGTACTTTCCATTTTCAGCTTCTCTCACTTCTTTCACTTACTCCTAATTTTTCCTGCTTATGTGAAACTTCTTGTTAGATTATTCCATCCCTTAGTTAACTATTCACCCGAATGTGAACCTCGGTAACAGTGATGGTGATCCACTGTCTGATATTTCTCTTCAAAGATAGTTAATAAGTAGAATATTAATATACTTGACAAGTTCTAGAGTACATTAGTTATGCTTCCAGAAAAATGAGTCCCCATGTATACGAGCCTTGTCCTCTTGATATTTGAACGGCGAACTTGACTAGGTTCTCATATTTTCTGAGACTTCATCGTTACAGTAACACTTGCAAGTCCATGAAGAAGCTGAATAGGCCTCATGTGTTATTCTATCCACAATTATTGTGAGGGGATGAGGAACATAAAAATTTGGATGTCCTTTTTGTGAGGAAGAAGATGTCTGTTGTCGTTCCCAAGTTGGTTTTCAGTATTGTTGTCCAAAATATCAGATTCCACTTTATTTTCCTCCAATCTTGAGAGGAGGCGGGGTATTATTTGTAACAGCTAATATAACTTGGTTTATCATAATCAGTTACCAAATTTTATCACAATCAGTTACAGCTTGATATGATTTAGTTATGCTTGGTTTACAGTTTCCAAAGTTTAGCTGATGAGCCTGCATTGCTTCTGTTTCTTATCTTTTTGTATCTTTTGGGCACAAATTTTGGACAGGTTCCCTGAAGTTGTTGAGCTTCTTAATGTGTGTCGGCTTGAAATTTGTGGCAAGATAAACACCCTTACCTTGTCTCCAAATACTCTGTATGCAACTTATCTTGTGTTCAAGATGATTGATGGCTTTGGTTTTGAGAATGAGAACTATCCGGTGGAGTTATCAATTGGTGTCGAAGGTGGCCATTGTTTAACCAAGATTGTCATTTTGGTGGATCCAGATGTAGAATGTAAGCGGCTCAACAGAATATTAGGTAGCCAGGACAACAAAGTATTTAGATTGAAACGTCCTAGTATTAGAAGTGATGAGTGGTTGGAAACTGAGATGGGAGAGTTCTTCATTTCAGGCTTACCAGATGAAGAAGTCCAAATGAGTATTACTGGAATAAAGGATGGTTATTATTGGAAGAGAGGTTTCTTTGTTGAAGGAATAGAAGTTAGGCCTAAGGAAGACAGTAAACAACATACACTGAACTATGCAGGGGTCTTGTGTCTTGGATTTCAGAATAGTGCCTAA
Protein sequence

>MS.gene74867.t1

MGAFEELPEGCIAAVLSRTTPADAGRLAVVSKTFRSAADSDAVWNHFLRSDPQFFDFIISNSPSFDNIPTKKSLYLALSNHPIIIDDGKKSVQLDRKSGKKCVMLAARSLDIDWDDDDEYWNWTAMPDSRFPEVVELLNVCRLEICGKINTLTLSPNTLYATYLVFKMIDGFGFENENYPVELSIGVEGGHCLTKIVILVDPDVECKRLNRILGSQDNKVFRLKRPSIRSDEWLETEMGEFFISGLPDEEVQMSITGIKDGYYWKRGFFVEGIEVRPKEDSKQHTLNYAGVLCLGFQNSA