AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07580.t1 MTR_1g079370 90.400 250 24 0 1 250 1 250 8.02e-168 467
MS.gene07580.t1 MTR_1g079380 83.200 250 42 0 1 250 1 250 1.55e-142 404
MS.gene07580.t1 MTR_1g079180 77.083 240 52 1 1 237 1 240 3.11e-136 387
MS.gene07580.t1 MTR_1g079260 68.750 256 73 2 1 249 1 256 1.40e-125 360
MS.gene07580.t1 MTR_1g100597 68.966 261 72 3 1 253 1 260 1.65e-124 358
MS.gene07580.t1 MTR_1g079460 68.110 254 76 2 1 251 1 252 1.36e-120 348
MS.gene07580.t1 MTR_1g079200 70.400 250 63 4 1 245 1 244 1.03e-119 345
MS.gene07580.t1 MTR_1g079230 64.368 261 78 2 1 250 1 257 9.03e-113 328
MS.gene07580.t1 MTR_1g100613 66.939 245 69 2 15 248 1 244 6.26e-112 325
MS.gene07580.t1 MTR_1g079850 62.595 262 82 4 1 246 1 262 5.04e-105 309
MS.gene07580.t1 MTR_3g452600 62.810 242 86 2 4 245 10 247 4.74e-102 301
MS.gene07580.t1 MTR_1g079250 62.162 259 86 4 1 247 1 259 3.99e-100 297
MS.gene07580.t1 MTR_1g026510 57.955 264 94 5 1 247 1 264 2.50e-98 292
MS.gene07580.t1 MTR_3g006850 53.376 311 98 6 4 278 17 316 8.57e-95 284
MS.gene07580.t1 MTR_2g079100 60.656 244 86 2 4 245 9 244 8.05e-94 280
MS.gene07580.t1 MTR_3g450990 56.202 258 93 4 4 245 10 263 3.26e-90 271
MS.gene07580.t1 MTR_1g079410 55.242 248 104 3 4 245 8 254 1.62e-88 266
MS.gene07580.t1 MTR_1g079350 56.977 258 99 6 1 247 1 257 8.55e-88 265
MS.gene07580.t1 MTR_7g096300 52.518 278 116 6 1 272 1 268 5.34e-81 261
MS.gene07580.t1 MTR_1g079140 46.127 284 119 5 3 253 12 294 1.18e-78 243
MS.gene07580.t1 MTR_1g079340 50.360 278 113 6 1 255 40 315 1.91e-73 229
MS.gene07580.t1 MTR_1g078470 72.549 153 39 2 93 245 17 166 5.28e-73 224
MS.gene07580.t1 MTR_1g079400 47.148 263 103 3 4 245 12 259 1.30e-69 218
MS.gene07580.t1 MTR_7g112550 43.726 263 128 8 2 246 5 265 7.68e-59 191
MS.gene07580.t1 MTR_1g079240 61.783 157 51 3 87 243 12 159 3.96e-54 175
MS.gene07580.t1 MTR_1g083580 37.452 259 147 5 2 246 6 263 8.61e-54 177
MS.gene07580.t1 MTR_7g112560 38.340 253 139 6 7 253 4 245 9.29e-50 167
MS.gene07580.t1 MTR_1g076870 61.194 134 36 1 128 245 2 135 2.03e-49 162
MS.gene07580.t1 MTR_4g023570 36.364 253 128 6 7 255 4 227 5.39e-45 154
MS.gene07580.t1 MTR_1g079350 50.299 167 72 4 1 159 1 164 1.04e-42 147
MS.gene07580.t1 MTR_1g079130 41.808 177 79 3 101 253 1 177 2.85e-38 135
MS.gene07580.t1 MTR_1g079210 56.098 123 42 1 129 239 7 129 2.64e-36 128
MS.gene07580.t1 MTR_7g096310 53.333 135 47 4 60 185 35 162 1.50e-33 122
MS.gene07580.t1 MTR_3g058640 59.048 105 35 2 128 229 7 106 7.00e-33 118
MS.gene07580.t1 MTR_1g078460 68.966 87 27 0 1 87 64 150 8.28e-33 119
MS.gene07580.t1 MTR_2g042540 60.000 105 40 2 1 103 1 105 1.19e-32 118
MS.gene07580.t1 MTR_1g079220 75.000 68 15 1 165 232 1 66 1.07e-25 98.2
MS.gene07580.t1 MTR_7g103380 26.217 267 167 7 4 253 19 272 6.78e-23 97.1
MS.gene07580.t1 MTR_0113s0040 29.208 202 126 4 2 188 20 219 1.49e-18 84.7
MS.gene07580.t1 MTR_1g101390 33.113 151 98 2 2 150 26 175 1.44e-15 76.3
MS.gene07580.t1 MTR_0002s0020 27.064 218 125 5 4 195 22 231 7.57e-15 73.9
MS.gene07580.t1 MTR_5g010800 25.616 203 128 6 2 186 15 212 3.05e-14 72.4
MS.gene07580.t1 MTR_4g083970 26.042 192 118 4 63 249 102 274 5.41e-14 71.6
MS.gene07580.t1 MTR_4g102770 31.973 147 94 3 4 146 19 163 1.69e-13 70.1
MS.gene07580.t1 MTR_1g079390 69.767 43 12 1 211 253 8 49 1.54e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07580.t1 AT2G02360 47.951 244 115 5 7 247 17 251 1.53e-75 233
MS.gene07580.t1 AT2G02340 43.478 253 136 4 1 247 33 284 1.01e-63 204
MS.gene07580.t1 AT1G80110 45.935 246 125 5 4 248 1 239 2.90e-63 201
MS.gene07580.t1 AT2G02240 43.852 244 128 5 7 248 64 300 5.60e-62 200
MS.gene07580.t1 AT2G02250 43.952 248 129 6 4 248 47 287 1.41e-61 199
MS.gene07580.t1 AT1G09155 40.370 270 140 7 7 256 3 271 7.49e-55 181
MS.gene07580.t1 AT2G02350 38.662 269 151 7 4 270 24 280 6.74e-54 178
MS.gene07580.t1 AT2G02230 37.786 262 122 5 7 230 35 293 7.81e-53 177
MS.gene07580.t1 AT1G56240 40.892 269 138 7 7 255 4 271 3.02e-50 169
MS.gene07580.t1 AT1G56250 41.264 269 137 7 7 255 4 271 6.30e-50 168
MS.gene07580.t1 AT2G02320 39.676 247 133 7 6 245 42 279 1.20e-46 160
MS.gene07580.t1 AT2G02310 34.800 250 155 4 4 250 45 289 5.47e-46 158
MS.gene07580.t1 AT2G02300 36.400 250 131 7 4 250 34 258 1.41e-42 149
MS.gene07580.t1 AT5G24560 41.579 190 98 4 6 192 5 184 1.45e-41 143
MS.gene07580.t1 AT3G53000 27.341 267 163 8 4 253 21 273 1.29e-27 109
MS.gene07580.t1 AT2G02350 35.556 180 101 7 101 278 1 167 1.48e-24 98.6
MS.gene07580.t1 AT1G63090 29.557 203 121 6 4 189 26 223 4.38e-17 80.5
MS.gene07580.t1 AT3G61060 25.238 210 134 5 6 197 27 231 2.01e-16 78.6
MS.gene07580.t1 AT1G12710 28.358 201 126 4 4 189 28 225 4.72e-16 77.8
MS.gene07580.t1 AT3G61060 24.286 210 137 4 6 197 27 232 1.81e-15 75.9
MS.gene07580.t1 AT1G12710 33.594 128 79 3 4 128 28 152 5.60e-13 69.3
MS.gene07580.t1 AT5G52120 29.936 157 97 3 1 147 18 171 1.54e-11 64.7

Find 85 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGCTGTATATTGAGTATT+TGG 0.131565 1.2:-62039430 None:intergenic
GGACGGTTCCGGGCGGGTTT+CGG 0.149835 1.2:+62039963 MS.gene07580:CDS
GACGGTTCCGGGCGGGTTTC+GGG 0.176286 1.2:+62039964 MS.gene07580:CDS
CTAGATCTCTTGCAATTGTT+TGG 0.246175 1.2:+62037785 MS.gene07580:CDS
AAAAGGAATGACAGAGATTC+AGG 0.277184 1.2:+62037355 None:intergenic
GCCTGGACAGCGGACGGTTC+CGG 0.277434 1.2:+62039952 MS.gene07580:intron
CCTGGACAGCGGACGGTTCC+GGG 0.277863 1.2:+62039953 MS.gene07580:intron
TAGATCTCTTGCAATTGTTT+GGG 0.285923 1.2:+62037786 MS.gene07580:CDS
AAGCTGTATATTGAGTATTT+GGG 0.314170 1.2:-62039429 None:intergenic
CATCATCGATCATGATAATA+AGG 0.320160 1.2:+62037601 MS.gene07580:CDS
GGATTCCTTTGCCTGATTCC+AGG 0.335609 1.2:+62037833 MS.gene07580:CDS
TCAACAAGCTTATCAACTTC+AGG 0.340561 1.2:-62039358 None:intergenic
GATATTTCATCTATCATCTC+AGG 0.362347 1.2:+62037512 MS.gene07580:CDS
GATGAGTTTGTTGGAGATAA+AGG 0.363302 1.2:+62039693 MS.gene07580:CDS
ATACCTTCCACTTCCACATT+TGG 0.377228 1.2:-62039559 None:intergenic
TTTCAATTGGTTAGAAAGAG+TGG 0.401836 1.2:+62037739 MS.gene07580:CDS
CCTCCGATTCCGACGCTGTA+TGG 0.406897 1.2:+62037471 MS.gene07580:CDS
TAGTACTAAAATTGTCTGTT+TGG 0.420764 1.2:+62039534 MS.gene07580:CDS
GACAGAGATTCAGGATTTGC+CGG 0.423087 1.2:+62037364 MS.gene07580:CDS
TTCGGCGGTTGGCGGTTTGA+CGG 0.435600 1.2:+62040059 MS.gene07580:CDS
ATTCCATACAGCGTCGGAAT+CGG 0.440337 1.2:-62037474 None:intergenic
ATACTAAGCACTATTGGAAC+TGG 0.440686 1.2:+62037812 MS.gene07580:CDS
TGGAGTTGTACGAGAGACTA+TGG 0.442874 1.2:-62037402 None:intergenic
CGTTACGACGGTGCTGCAAA+TGG 0.455191 1.2:+62041662 MS.gene07580:CDS
GGGTGGTTGGAGATTGAGAT+GGG 0.458032 1.2:+62039631 MS.gene07580:CDS
GGGGTGATACTAAGCACTAT+TGG 0.458105 1.2:+62037806 MS.gene07580:CDS
TCCAAGTGAATCTACAGTTT+CGG 0.468058 1.2:+62040041 MS.gene07580:CDS
GCGCTAACTAACCTGGAATC+AGG 0.472883 1.2:-62037844 None:intergenic
AGAAGTCCTGATGAGTTTGT+TGG 0.481141 1.2:+62039684 MS.gene07580:CDS
ATGGCGGCAATGCATCCTTC+CGG 0.482859 1.2:-62037383 None:intergenic
CGTCCTAGTGTGAGAAGCGA+TGG 0.485861 1.2:+62039610 MS.gene07580:CDS
CGGGTTTCGGGCTCAAAACT+CGG 0.486347 1.2:+62039976 MS.gene07580:CDS
TTTGACACCGACGGTTTGAA+CGG 0.492015 1.2:-62040001 None:intergenic
TTATCTCCAACAAACTCATC+AGG 0.495784 1.2:-62039690 None:intergenic
GACAGCGGACGGTTCCGGGC+GGG 0.500690 1.2:+62039957 MS.gene07580:intron
TTATCATGATCGATGATGAC+AGG 0.505190 1.2:-62037596 None:intergenic
GTAGGAGCGTTGGCGAGTAA+AGG 0.512124 1.2:-62037539 None:intergenic
AGTTTGTTGGAGATAAAGGC+TGG 0.513728 1.2:+62039697 MS.gene07580:CDS
TGGGTGGTTGGAGATTGAGA+TGG 0.517146 1.2:+62039630 MS.gene07580:CDS
GAGTCTCTGCCGGCGTCGAG+TGG 0.524622 1.2:-62037422 None:intergenic
CAACAAGCTTATCAACTTCA+GGG 0.526604 1.2:-62039357 None:intergenic
GAATCTACAGTTTCGGCGGT+TGG 0.529602 1.2:+62040048 MS.gene07580:CDS
ATGCAGCATAACAGAGCAGT+AGG 0.534871 1.2:+62039580 MS.gene07580:CDS
TCTACAGTTTCGGCGGTTGG+CGG 0.535341 1.2:+62040051 MS.gene07580:CDS
CGTCGGAATCGGAGGCTGAT+CGG 0.538969 1.2:-62037463 None:intergenic
CACCCATCGCTTCTCACACT+AGG 0.543006 1.2:-62039613 None:intergenic
CCATACAGCGTCGGAATCGG+AGG 0.547740 1.2:-62037471 None:intergenic
AGATCTCTTGCAATTGTTTG+GGG 0.552612 1.2:+62037787 MS.gene07580:CDS
GAGATTCAGGATTTGCCGGA+AGG 0.560627 1.2:+62037368 MS.gene07580:CDS
GTTCAAAATGATTGATGCGT+GGG 0.567046 1.2:+62039459 MS.gene07580:CDS
TTTGGATCCAAATGTGGAAG+TGG 0.569537 1.2:+62039552 MS.gene07580:CDS
ATGATAGATGAAATATCAGA+AGG 0.573253 1.2:-62037506 None:intergenic
TGTGAGAAGCGATGGGTGGT+TGG 0.576323 1.2:+62039618 MS.gene07580:CDS
ATATTTCATCTATCATCTCA+GGG 0.577226 1.2:+62037513 MS.gene07580:CDS
GATCCAAATGTGGAAGTGGA+AGG 0.579730 1.2:+62039556 MS.gene07580:CDS
CGTCCTGTGGAGTTATCAGT+TGG 0.583128 1.2:+62039493 MS.gene07580:CDS
GCCGAAACTGTAGATTCACT+TGG 0.585674 1.2:-62040042 None:intergenic
GTATGTTTGCTAGAAATTCG+TGG 0.589897 1.2:+62039382 MS.gene07580:CDS
GTGGTTGGAGATTGAGATGG+GGG 0.596500 1.2:+62039633 MS.gene07580:CDS
CATTTGCAGCACCGTCGTAA+CGG 0.598272 1.2:-62041661 None:intergenic
TTATCAGTTGGTGTCGAAGG+TGG 0.605148 1.2:+62039505 MS.gene07580:CDS
ACACCAACTGATAACTCCAC+AGG 0.607721 1.2:-62039496 None:intergenic
AGCTGTATATTGAGTATTTG+GGG 0.611231 1.2:-62039428 None:intergenic
GCACCGTCGTAACGGTATCT+CGG 0.611481 1.2:-62041653 None:intergenic
AGAAACGACAGAGTCTCTGC+CGG 0.615620 1.2:-62037432 None:intergenic
GGTGGTTGGAGATTGAGATG+GGG 0.619250 1.2:+62039632 MS.gene07580:CDS
GAGTTATCAGTTGGTGTCGA+AGG 0.620810 1.2:+62039502 MS.gene07580:CDS
TGTCTGTTTGGATCCAAATG+TGG 0.625217 1.2:+62039546 MS.gene07580:CDS
CTCGGAACCGTTCAAACCGT+CGG 0.634646 1.2:+62039994 MS.gene07580:CDS
ACTAACCTGGAATCAGGCAA+AGG 0.635048 1.2:-62037838 None:intergenic
GGGATTTCAGAACCGTCCTG+TGG 0.635758 1.2:+62039480 MS.gene07580:CDS
AAACTGTAGATTCACTTGGA+CGG 0.642325 1.2:-62040038 None:intergenic
GTCCTAGTGTGAGAAGCGAT+GGG 0.643186 1.2:+62039611 MS.gene07580:CDS
TGTTCAAAATGATTGATGCG+TGG 0.644329 1.2:+62039458 MS.gene07580:CDS
AAGTGAATCTACAGTTTCGG+CGG 0.646257 1.2:+62040044 MS.gene07580:CDS
GGACAGCGGACGGTTCCGGG+CGG 0.648619 1.2:+62039956 MS.gene07580:intron
TATCATGATCGATGATGACA+GGG 0.656082 1.2:-62037595 None:intergenic
TTCAAAATGATTGATGCGTG+GGG 0.672657 1.2:+62039460 MS.gene07580:CDS
AAAACGATTCCATACAGCGT+CGG 0.672667 1.2:-62037480 None:intergenic
AGTATTTGGGGACAGAACAA+CGG 0.674978 1.2:-62039416 None:intergenic
CTAGTGTGAGAAGCGATGGG+TGG 0.709944 1.2:+62039614 MS.gene07580:CDS
CAACTGATAACTCCACAGGA+CGG 0.710853 1.2:-62039492 None:intergenic
CGTACAACTCCACTCGACGC+CGG 0.717247 1.2:+62037413 MS.gene07580:CDS
ATACCGAGATACCGTTACGA+CGG 0.730450 1.2:+62041650 MS.gene07580:CDS
AGTTGTACGAGAGACTATGG+CGG 0.789727 1.2:-62037399 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+AGG - chr1.2:62039177-62039158 None:intergenic 0.0%
!! TATATATATATATATATATA+CGG - chr1.2:62039177-62039158 None:intergenic 0.0%
!!! ATCTAAAAAAAAAATTTTAC+AGG - chr1.2:62040180-62040199 None:intergenic 10.0%
!!! TCTAAAAAAAAAATTTTACA+GGG - chr1.2:62040179-62040198 None:intergenic 10.0%
!! AATAGTATCTAGTATTAATT+AGG - chr1.2:62037911-62037930 None:intergenic 15.0%
!! ATTAATGTTGAAAAATCAAT+TGG + chr1.2:62041515-62041534 MS.gene07580:intron 15.0%
!! ATTCAAAAAGAATAACAAAA+AGG + chr1.2:62038137-62038156 MS.gene07580:intron 15.0%
!! CATTAAAAAATAAATAGGTT+CGG - chr1.2:62040437-62040456 None:intergenic 15.0%
!! TGATGCATTAAAAAATAAAT+AGG - chr1.2:62040442-62040461 None:intergenic 15.0%
!!! CTAAAAAAAAAATTTTACAG+GGG - chr1.2:62040178-62040197 None:intergenic 15.0%
!! ATATAGTATGTTGAAAAGTT+GGG - chr1.2:62039854-62039873 None:intergenic 20.0%
!! ATTGAACATGCTTAAAATTT+GGG - chr1.2:62038306-62038325 None:intergenic 20.0%
!! CTTAATATTCGATAAATTGA+CGG - chr1.2:62037645-62037664 None:intergenic 20.0%
!! GATGCATTCAAAAATATATA+GGG - chr1.2:62038558-62038577 None:intergenic 20.0%
!! TATATAGTATGTTGAAAAGT+TGG - chr1.2:62039855-62039874 None:intergenic 20.0%
!! TGATGCATTCAAAAATATAT+AGG - chr1.2:62038559-62038578 None:intergenic 20.0%
!! TTGTAAAGTAACAAACAAAT+TGG - chr1.2:62038607-62038626 None:intergenic 20.0%
!!! AAAACTCTGAAAATTTTTGA+AGG - chr1.2:62037722-62037741 None:intergenic 20.0%
!!! AAATTTTCAGAGTTTTCAAT+TGG + chr1.2:62037726-62037745 MS.gene07580:intron 20.0%
!!! CACTAAAAGTAAAAACATTT+TGG - chr1.2:62040694-62040713 None:intergenic 20.0%
!!! CTTTTTGAAACTAAATTATG+TGG - chr1.2:62040630-62040649 None:intergenic 20.0%
!!! GGTCTGATTTTTAAAAATTT+TGG - chr1.2:62040470-62040489 None:intergenic 20.0%
!!! GTAAAATTTCTAAGAAAACA+TGG - chr1.2:62038796-62038815 None:intergenic 20.0%
!!! TGGTCAGATATTTTAAAATT+TGG - chr1.2:62038587-62038606 None:intergenic 20.0%
! AACCATTAGATCATAATCAA+TGG + chr1.2:62041392-62041411 MS.gene07580:intron 25.0%
! AAGCTGTATATTGAGTATTT+GGG - chr1.2:62039432-62039451 None:intergenic 25.0%
! ATACCATATATCAAAATCCA+TGG + chr1.2:62038254-62038273 MS.gene07580:intron 25.0%
! ATATTTCATCTATCATCTCA+GGG + chr1.2:62037513-62037532 MS.gene07580:CDS 25.0%
! ATGATAGATGAAATATCAGA+AGG - chr1.2:62037509-62037528 None:intergenic 25.0%
! CATTCAAAAATATATAGGGT+CGG - chr1.2:62038554-62038573 None:intergenic 25.0%
! CATTTACTATACTATGCAAT+AGG + chr1.2:62039785-62039804 MS.gene07580:intron 25.0%
! CGTCAATTTATCGAATATTA+AGG + chr1.2:62037643-62037662 MS.gene07580:intron 25.0%
! GATTGAACATGCTTAAAATT+TGG - chr1.2:62038307-62038326 None:intergenic 25.0%
! GCAATAAACAATATAAAGTG+TGG - chr1.2:62039914-62039933 None:intergenic 25.0%
! TAAGCTGTATATTGAGTATT+TGG - chr1.2:62039433-62039452 None:intergenic 25.0%
! TAGTACTAAAATTGTCTGTT+TGG + chr1.2:62039534-62039553 MS.gene07580:CDS 25.0%
! TCAACATTAATCTTCAACAA+TGG - chr1.2:62041506-62041525 None:intergenic 25.0%
! TCATAAAAATTGCAAATGCA+CGG + chr1.2:62041430-62041449 MS.gene07580:intron 25.0%
! TTAAGTCTCAAAGAAAACAT+GGG - chr1.2:62040956-62040975 None:intergenic 25.0%
! TTAGATCATAATCAATGGTT+AGG + chr1.2:62041397-62041416 MS.gene07580:intron 25.0%
! TTCTTGAAGGAATAGAAATT+AGG + chr1.2:62039740-62039759 MS.gene07580:intron 25.0%
! TTGTAAAATGAAGATTCTTC+AGG + chr1.2:62040207-62040226 MS.gene07580:intron 25.0%
! TTGTAAAGTAACAAGCAAAT+TGG - chr1.2:62040491-62040510 None:intergenic 25.0%
! TTTATGTGCTTGTAAACATT+GGG - chr1.2:62041574-62041593 None:intergenic 25.0%
!! AACCATTGATTATGATCTAA+TGG - chr1.2:62041397-62041416 None:intergenic 25.0%
!! AGATATTTGAAATGAACAGT+TGG + chr1.2:62040834-62040853 MS.gene07580:intron 25.0%
!! CTTTGTTTGGTAAAAAATAG+TGG - chr1.2:62038041-62038060 None:intergenic 25.0%
!! GAAGAATCTTCATTTTACAA+GGG - chr1.2:62040207-62040226 None:intergenic 25.0%
!! TGAAGAATCTTCATTTTACA+AGG - chr1.2:62040208-62040227 None:intergenic 25.0%
!! TTTTATGTGCTTGTAAACAT+TGG - chr1.2:62041575-62041594 None:intergenic 25.0%
!!! AAAAATAGTGGATAGTTGAT+AGG - chr1.2:62038029-62038048 None:intergenic 25.0%
!!! AAAGCCTTGTCATTTTTTAT+GGG + chr1.2:62038057-62038076 MS.gene07580:intron 25.0%
!!! ATGGATTTTGATATATGGTA+TGG - chr1.2:62038255-62038274 None:intergenic 25.0%
!!! TAAGTAATATATGCTGTTTC+AGG - chr1.2:62041190-62041209 None:intergenic 25.0%
!!! TAAGTTATATATGCCGTTTT+AGG - chr1.2:62039031-62039050 None:intergenic 25.0%
AAAGATTCTGCTAACTCATT+GGG - chr1.2:62040246-62040265 None:intergenic 30.0%
AAATGAAGATTCTTCAGGAT+TGG + chr1.2:62040212-62040231 MS.gene07580:intron 30.0%
AATAGCCAAGGTAATTCAAT+GGG - chr1.2:62040995-62041014 None:intergenic 30.0%
ACCTTATGCAAAAGATTGAA+TGG - chr1.2:62038852-62038871 None:intergenic 30.0%
AGCAATTAGGATCACAAAAA+AGG - chr1.2:62040407-62040426 None:intergenic 30.0%
AGCTGTATATTGAGTATTTG+GGG - chr1.2:62039431-62039450 None:intergenic 30.0%
AGTGATCAATTACTGATGAT+GGG + chr1.2:62038105-62038124 MS.gene07580:intron 30.0%
CAGGATCGTTAACTAAAAAT+TGG - chr1.2:62039118-62039137 None:intergenic 30.0%
CATAAAAATTGCAAATGCAC+GGG + chr1.2:62041431-62041450 MS.gene07580:intron 30.0%
CATCATCGATCATGATAATA+AGG + chr1.2:62037601-62037620 MS.gene07580:CDS 30.0%
GAATGTTGGATTTCCTAAAA+CGG + chr1.2:62039015-62039034 MS.gene07580:intron 30.0%
GATATTTCATCTATCATCTC+AGG + chr1.2:62037512-62037531 MS.gene07580:CDS 30.0%
GATCGTTAACTAAAAATTGC+AGG - chr1.2:62039115-62039134 None:intergenic 30.0%
GATCGTTAACTAAAAATTGG+AGG - chr1.2:62041274-62041293 None:intergenic 30.0%
GATTGTCACAAAATAAGAGT+TGG - chr1.2:62038897-62038916 None:intergenic 30.0%
GTTAAGTCTCAAAGAAAACA+TGG - chr1.2:62040957-62040976 None:intergenic 30.0%
TAATAGCCAAGGTAATTCAA+TGG - chr1.2:62040996-62041015 None:intergenic 30.0%
TAATCTTCAACAATGGAAAC+AGG - chr1.2:62041499-62041518 None:intergenic 30.0%
TACTATACGAAGACATTGTT+TGG - chr1.2:62039888-62039907 None:intergenic 30.0%
TAGATCTCTTGCAATTGTTT+GGG + chr1.2:62037786-62037805 MS.gene07580:CDS 30.0%
TAGTGATCAATTACTGATGA+TGG + chr1.2:62038104-62038123 MS.gene07580:intron 30.0%
TATTCGATAAATTGACGGTT+AGG - chr1.2:62037640-62037659 None:intergenic 30.0%
TCAGTAATTGATCACTAACA+TGG - chr1.2:62038101-62038120 None:intergenic 30.0%
TGAGACTTAACGTATTGTTA+TGG + chr1.2:62040966-62040985 MS.gene07580:intron 30.0%
TGCAAAAGATATAATAGCCA+AGG - chr1.2:62041007-62041026 None:intergenic 30.0%
TTATGTGCTTGTAAACATTG+GGG - chr1.2:62041573-62041592 None:intergenic 30.0%
TTTCAATTGGTTAGAAAGAG+TGG + chr1.2:62037739-62037758 MS.gene07580:CDS 30.0%
! AAAAGTGCACTATATTACAG+GGG - chr1.2:62040147-62040166 None:intergenic 30.0%
! CAAAAGTGCACTATATTACA+GGG - chr1.2:62040148-62040167 None:intergenic 30.0%
! TCATTTTCTCCCATACTTAA+AGG - chr1.2:62041156-62041175 None:intergenic 30.0%
! TCCTTTTAGGCTTTTAGTAT+GGG + chr1.2:62038985-62039004 MS.gene07580:intron 30.0%
! TTGCTGTTCAGTATATTTCT+AGG + chr1.2:62039930-62039949 MS.gene07580:intron 30.0%
!! AAAAATGACAAGGCTTTGTT+TGG - chr1.2:62038054-62038073 None:intergenic 30.0%
!! AGACAATTTTAGTACTACTC+TGG - chr1.2:62039531-62039550 None:intergenic 30.0%
!! GTGTTTTATTACATGACAGA+TGG - chr1.2:62039271-62039290 None:intergenic 30.0%
!! GTTATTTCTACACATGTTCA+TGG + chr1.2:62040539-62040558 MS.gene07580:intron 30.0%
!! GTTTTTACTTTTAGTGTGAC+TGG + chr1.2:62040698-62040717 MS.gene07580:intron 30.0%
!! TAGCCATGGATTTTGATATA+TGG - chr1.2:62038260-62038279 None:intergenic 30.0%
!! TTTGTGTACTACTTTTGAAC+AGG + chr1.2:62039332-62039351 MS.gene07580:intron 30.0%
!!! AATTACTGATGATGGGTTTT+AGG + chr1.2:62038112-62038131 MS.gene07580:intron 30.0%
!!! AGATAGAGATCTTTTTTGGT+AGG - chr1.2:62037560-62037579 None:intergenic 30.0%
!!! AGCAAGATAGAGATCTTTTT+TGG - chr1.2:62037564-62037583 None:intergenic 30.0%
!!! ATTACTGATGATGGGTTTTA+GGG + chr1.2:62038113-62038132 MS.gene07580:intron 30.0%
!!! CAAAGCCTTGTCATTTTTTA+TGG + chr1.2:62038056-62038075 MS.gene07580:intron 30.0%
AAACTGTAGATTCACTTGGA+CGG - chr1.2:62040041-62040060 None:intergenic 35.0%
AACTTCATCCTTACACTATC+AGG + chr1.2:62038704-62038723 MS.gene07580:intron 35.0%
AAGATTCTGCTAACTCATTG+GGG - chr1.2:62040245-62040264 None:intergenic 35.0%
AAGTCGATGTCCTTTAAGTA+TGG + chr1.2:62041143-62041162 MS.gene07580:intron 35.0%
AATGGCCAAGGTAATTTGAT+GGG - chr1.2:62038834-62038853 None:intergenic 35.0%
ACACTTATCATGAGAAAGTG+AGG + chr1.2:62041111-62041130 MS.gene07580:intron 35.0%
AGATCTCTTGCAATTGTTTG+GGG + chr1.2:62037787-62037806 MS.gene07580:CDS 35.0%
AGTCGATGTCCTTTAAGTAT+GGG + chr1.2:62041144-62041163 MS.gene07580:intron 35.0%
ATACTAAGCACTATTGGAAC+TGG + chr1.2:62037812-62037831 MS.gene07580:CDS 35.0%
ATGCCAACTAAATGAGTAAG+GGG + chr1.2:62040758-62040777 MS.gene07580:intron 35.0%
CAAAGATTCTGCTAACTCAT+TGG - chr1.2:62040247-62040266 None:intergenic 35.0%
CAACAAGCTTATCAACTTCA+GGG - chr1.2:62039360-62039379 None:intergenic 35.0%
CAAGCCCATAAAAAATGACA+AGG - chr1.2:62038064-62038083 None:intergenic 35.0%
CACAAAATAAGAGTTGGAGT+TGG - chr1.2:62038891-62038910 None:intergenic 35.0%
CATCGATCATGATAATAAGG+TGG + chr1.2:62037604-62037623 MS.gene07580:intron 35.0%
CCAACTATTCTTCACTAACT+TGG - chr1.2:62038220-62038239 None:intergenic 35.0%
CCAAGTTAGTGAAGAATAGT+TGG + chr1.2:62038217-62038236 MS.gene07580:intron 35.0%
CTAGATCTCTTGCAATTGTT+TGG + chr1.2:62037785-62037804 MS.gene07580:CDS 35.0%
CTTACCAAAGAGACCTTAAT+CGG - chr1.2:62037959-62037978 None:intergenic 35.0%
GAAATCCCATCAAATTACCT+TGG + chr1.2:62038826-62038845 MS.gene07580:intron 35.0%
GATGCCAACTAAATGAGTAA+GGG + chr1.2:62040757-62040776 MS.gene07580:intron 35.0%
GATTAGAAGATGGCAAAAGT+CGG - chr1.2:62038198-62038217 None:intergenic 35.0%
GATTGTCACAACATAAGAGT+TGG - chr1.2:62041062-62041081 None:intergenic 35.0%
GGTCGATAAATTAACAATGC+AGG - chr1.2:62039137-62039156 None:intergenic 35.0%
GTATGGGAGAAAATGAATGT+TGG + chr1.2:62041160-62041179 MS.gene07580:intron 35.0%
GTGCTTGCAAAAATTTCTGA+TGG + chr1.2:62038333-62038352 MS.gene07580:intron 35.0%
GTTCAAAATGATTGATGCGT+GGG + chr1.2:62039459-62039478 MS.gene07580:CDS 35.0%
TACATGTAGCATCTTCAATG+TGG - chr1.2:62038772-62038791 None:intergenic 35.0%
TATAGGACATATCAAGTGAG+AGG + chr1.2:62041334-62041353 MS.gene07580:intron 35.0%
TATCATGATCGATGATGACA+GGG - chr1.2:62037598-62037617 None:intergenic 35.0%
TCAACAAGCTTATCAACTTC+AGG - chr1.2:62039361-62039380 None:intergenic 35.0%
TCCAAATTCTCTAAGTCACA+AGG - chr1.2:62038359-62038378 None:intergenic 35.0%
TCCAAGTGAATCTACAGTTT+CGG + chr1.2:62040041-62040060 MS.gene07580:CDS 35.0%
TCCCATACTAAAAGCCTAAA+AGG - chr1.2:62038989-62039008 None:intergenic 35.0%
TGATGCCAACTAAATGAGTA+AGG + chr1.2:62040756-62040775 MS.gene07580:intron 35.0%
TGGAGCAAATGTCAGAAAAT+GGG - chr1.2:62040610-62040629 None:intergenic 35.0%
TGTTCAAAATGATTGATGCG+TGG + chr1.2:62039458-62039477 MS.gene07580:CDS 35.0%
TTATCATGATCGATGATGAC+AGG - chr1.2:62037599-62037618 None:intergenic 35.0%
TTATCTCCAACAAACTCATC+AGG - chr1.2:62039693-62039712 None:intergenic 35.0%
TTCAAAATGATTGATGCGTG+GGG + chr1.2:62039460-62039479 MS.gene07580:CDS 35.0%
! AAGCTACAGAAGAAGGATTT+TGG - chr1.2:62040356-62040375 None:intergenic 35.0%
! AGCTACAGAAGAAGGATTTT+GGG - chr1.2:62040355-62040374 None:intergenic 35.0%
! CACTAACTTGGATTAGAAGA+TGG - chr1.2:62038208-62038227 None:intergenic 35.0%
! CCAAAAGTGCACTATATTAC+AGG - chr1.2:62040149-62040168 None:intergenic 35.0%
! CCTGTAATATAGTGCACTTT+TGG + chr1.2:62040146-62040165 MS.gene07580:intron 35.0%
! GAATCTTCATTTTACAAGGG+TGG - chr1.2:62040204-62040223 None:intergenic 35.0%
! GCCATTCAATCTTTTGCATA+AGG + chr1.2:62038848-62038867 MS.gene07580:intron 35.0%
! GTATGTTTGCTAGAAATTCG+TGG + chr1.2:62039382-62039401 MS.gene07580:CDS 35.0%
! GTCCTTTTAGGCTTTTAGTA+TGG + chr1.2:62038984-62039003 MS.gene07580:intron 35.0%
! TTAGTGAAGAATAGTTGGTG+TGG + chr1.2:62038222-62038241 MS.gene07580:intron 35.0%
! TTTGAAATGAACAGTTGGCT+AGG + chr1.2:62040839-62040858 MS.gene07580:intron 35.0%
! TTTTGTGATCCTAATTGCTG+CGG + chr1.2:62040408-62040427 MS.gene07580:intron 35.0%
!! AATCAAACCAGTACCGATTA+AGG + chr1.2:62037943-62037962 MS.gene07580:intron 35.0%
!! ACATAAGAGTTGGTAAGAGT+TGG - chr1.2:62041052-62041071 None:intergenic 35.0%
!! GATGAGTTTGTTGGAGATAA+AGG + chr1.2:62039693-62039712 MS.gene07580:CDS 35.0%
!! GCTGCTTAATTGTGTTACTT+AGG - chr1.2:62039766-62039785 None:intergenic 35.0%
!! TAATCGGTACTGGTTTGATT+CGG - chr1.2:62037943-62037962 None:intergenic 35.0%
!!! AACGGTATCTCGGTATTTTT+TGG - chr1.2:62041646-62041665 None:intergenic 35.0%
!!! TTTTTTGATCCTGATTGCTG+CGG + chr1.2:62038525-62038544 MS.gene07580:intron 35.0%
AAAACGATTCCATACAGCGT+CGG - chr1.2:62037483-62037502 None:intergenic 40.0%
AAAGAGACCTTAATCGGTAC+TGG - chr1.2:62037953-62037972 None:intergenic 40.0%
AACAGCAAAGCTACAGAAGA+AGG - chr1.2:62040363-62040382 None:intergenic 40.0%
AACCCCCTTACTCATTTAGT+TGG - chr1.2:62040764-62040783 None:intergenic 40.0%
AACTGCAGAGTTACAGAAGA+AGG - chr1.2:62038483-62038502 None:intergenic 40.0%
AAGAGTGGTCTCTTTCTTGA+AGG + chr1.2:62039727-62039746 MS.gene07580:intron 40.0%
AAGTGAATCTACAGTTTCGG+CGG + chr1.2:62040044-62040063 MS.gene07580:CDS 40.0%
AAGTTAAGCGCTAACTAACC+TGG - chr1.2:62037854-62037873 None:intergenic 40.0%
ACCCTAGTAAGCTTCTACAT+AGG - chr1.2:62038684-62038703 None:intergenic 40.0%
ACTTAGCTGAAGTGATATGG+AGG - chr1.2:62038389-62038408 None:intergenic 40.0%
AGAAGTCCTGATGAGTTTGT+TGG + chr1.2:62039684-62039703 MS.gene07580:CDS 40.0%
AGTATTTGGGGACAGAACAA+CGG - chr1.2:62039419-62039438 None:intergenic 40.0%
AGTTGGATGCAAAGGATAGT+TGG - chr1.2:62040272-62040291 None:intergenic 40.0%
ATAAGAGTTGGAGTTGGAGT+TGG - chr1.2:62038885-62038904 None:intergenic 40.0%
ATACCTTCCACTTCCACATT+TGG - chr1.2:62039562-62039581 None:intergenic 40.0%
CGGTTAATTCTTAGCAGATG+AGG - chr1.2:62038178-62038197 None:intergenic 40.0%
GAATGGCCAAGGTAATTTGA+TGG - chr1.2:62038835-62038854 None:intergenic 40.0%
GACACTTAGCTGAAGTGATA+TGG - chr1.2:62038392-62038411 None:intergenic 40.0%
GAGTTACAGAAGAAGGATCT+TGG - chr1.2:62038476-62038495 None:intergenic 40.0%
GCCTATGTAGAAGCTTACTA+GGG + chr1.2:62038680-62038699 MS.gene07580:intron 40.0%
GCCTTGTGACTTAGAGAATT+TGG + chr1.2:62038355-62038374 MS.gene07580:intron 40.0%
GGAATCCCATTGAATTACCT+TGG + chr1.2:62040987-62041006 MS.gene07580:intron 40.0%
GGAGCAAATGTCAGAAAATG+GGG - chr1.2:62040609-62040628 None:intergenic 40.0%
GGCCTAGTAAACTTCTACAT+AGG - chr1.2:62040889-62040908 None:intergenic 40.0%
GGCCTATGTAGAAGTTTACT+AGG + chr1.2:62040884-62040903 MS.gene07580:intron 40.0%
GGCTGATAAATTAACAGTGC+AGG - chr1.2:62041296-62041315 None:intergenic 40.0%
GTATGGGAGAAGATGAATGT+TGG + chr1.2:62039001-62039020 MS.gene07580:intron 40.0%
GTGGAGCAAATGTCAGAAAA+TGG - chr1.2:62040611-62040630 None:intergenic 40.0%
GTTGGATGCAAAGGATAGTT+GGG - chr1.2:62040271-62040290 None:intergenic 40.0%
TACATAGGCCAGATAGTGTA+AGG - chr1.2:62038669-62038688 None:intergenic 40.0%
TCCTTAGTCCTTACACTATC+TGG + chr1.2:62038658-62038677 MS.gene07580:intron 40.0%
TGCAAAAGATTGAATGGCCA+AGG - chr1.2:62038846-62038865 None:intergenic 40.0%
TGCCAACTAAATGAGTAAGG+GGG + chr1.2:62040759-62040778 MS.gene07580:intron 40.0%
TGGAGATAAAGGCTGGTAAT+TGG + chr1.2:62039704-62039723 MS.gene07580:intron 40.0%
TGTAGTGAGCACGACAAAAA+TGG - chr1.2:62040568-62040587 None:intergenic 40.0%
TGTCTGTTTGGATCCAAATG+TGG + chr1.2:62039546-62039565 MS.gene07580:CDS 40.0%
TTTGGATCCAAATGTGGAAG+TGG + chr1.2:62039552-62039571 MS.gene07580:CDS 40.0%
! AAAATTTGGGTTTGAACCCG+AGG - chr1.2:62038293-62038312 None:intergenic 40.0%
! ACTGTCGGTTGTGGATTAAA+GGG + chr1.2:62040105-62040124 MS.gene07580:intron 40.0%
! AGAATAGTTGGTGTGGTGTT+AGG + chr1.2:62038229-62038248 MS.gene07580:intron 40.0%
! AGCAATGTCGATGTCCTTTT+AGG + chr1.2:62038972-62038991 MS.gene07580:intron 40.0%
! ATGCAATAGGTCTTGTGTCT+TGG + chr1.2:62039798-62039817 MS.gene07580:intron 40.0%
! GCTACAGAAGAAGGATTTTG+GGG - chr1.2:62040354-62040373 None:intergenic 40.0%
! TACATAGGCCTGATAGTGTA+AGG - chr1.2:62038715-62038734 None:intergenic 40.0%
! TTTTGCAACCAACTTCAGCT+TGG + chr1.2:62038446-62038465 MS.gene07580:intron 40.0%
!! AGTACCGATTAAGGTCTCTT+TGG + chr1.2:62037952-62037971 MS.gene07580:intron 40.0%
!! AGTTTGTTGGAGATAAAGGC+TGG + chr1.2:62039697-62039716 MS.gene07580:CDS 40.0%
!! GTTCAGTATATTTCTAGGCC+TGG + chr1.2:62039935-62039954 MS.gene07580:intron 40.0%
!! GTTGATAGGCTAGCTTATAG+CGG - chr1.2:62038015-62038034 None:intergenic 40.0%
!!! ATCTTTTTTGGTAGGAGCGT+TGG - chr1.2:62037552-62037571 None:intergenic 40.0%
AAGGCTGGTAATTGGAAGAG+TGG + chr1.2:62039712-62039731 MS.gene07580:intron 45.0%
AATGGAAACAGGCAGAGAAG+AGG - chr1.2:62041488-62041507 None:intergenic 45.0%
ACACCAACTGATAACTCCAC+AGG - chr1.2:62039499-62039518 None:intergenic 45.0%
ACACTTATCACGAGAACCTG+AGG + chr1.2:62038944-62038963 MS.gene07580:intron 45.0%
ACTAACCTGGAATCAGGCAA+AGG - chr1.2:62037841-62037860 None:intergenic 45.0%
AGAGCTGAAGTTGGATGCAA+AGG - chr1.2:62040280-62040299 None:intergenic 45.0%
AGGAGAGGGAAGAAGATAGT+TGG - chr1.2:62041468-62041487 None:intergenic 45.0%
AGTTGTACGAGAGACTATGG+CGG - chr1.2:62037402-62037421 None:intergenic 45.0%
AGTTTACTAGGCCACATGTG+TGG + chr1.2:62040896-62040915 MS.gene07580:intron 45.0%
ATACCGAGATACCGTTACGA+CGG + chr1.2:62041650-62041669 MS.gene07580:CDS 45.0%
ATGCAAAGGATAGTTGGGTG+AGG - chr1.2:62040314-62040333 None:intergenic 45.0%
ATGCAGCATAACAGAGCAGT+AGG + chr1.2:62039580-62039599 MS.gene07580:CDS 45.0%
CAACTGATAACTCCACAGGA+CGG - chr1.2:62039495-62039514 None:intergenic 45.0%
CAAGCTGAAGTTGGATGCAA+AGG - chr1.2:62040328-62040347 None:intergenic 45.0%
CTTTAATCCACAACCGACAG+TGG - chr1.2:62040106-62040125 None:intergenic 45.0%
CTTTGCATCCAACTTCAGCT+TGG + chr1.2:62040278-62040297 MS.gene07580:intron 45.0%
GACAGAGATTCAGGATTTGC+CGG + chr1.2:62037364-62037383 MS.gene07580:CDS 45.0%
GATAGTTGGGTGAGGATCTT+GGG - chr1.2:62040306-62040325 None:intergenic 45.0%
GATCCAAATGTGGAAGTGGA+AGG + chr1.2:62039556-62039575 MS.gene07580:CDS 45.0%
GCCAGATAGTGTAAGGACTA+AGG - chr1.2:62038662-62038681 None:intergenic 45.0%
GCCGAAACTGTAGATTCACT+TGG - chr1.2:62040045-62040064 None:intergenic 45.0%
GCTTGTAAACATTGGGGAAG+TGG - chr1.2:62041567-62041586 None:intergenic 45.0%
GGCCTAGTAAGCTTCTACAT+AGG - chr1.2:62038730-62038749 None:intergenic 45.0%
GGCCTATGTAGAAGCTTACT+AGG + chr1.2:62038679-62038698 MS.gene07580:intron 45.0%
GGGGTGATACTAAGCACTAT+TGG + chr1.2:62037806-62037825 MS.gene07580:CDS 45.0%
GTTGGCATCATAACTGATGC+AGG - chr1.2:62040746-62040765 None:intergenic 45.0%
TCAGGTTCTCGTGATAAGTG+TGG - chr1.2:62038945-62038964 None:intergenic 45.0%
TGGAGTTGTACGAGAGACTA+TGG - chr1.2:62037405-62037424 None:intergenic 45.0%
TTTGACACCGACGGTTTGAA+CGG - chr1.2:62040004-62040023 None:intergenic 45.0%
! ATTCCATACAGCGTCGGAAT+CGG - chr1.2:62037477-62037496 None:intergenic 45.0%
! CACTGTCGGTTGTGGATTAA+AGG + chr1.2:62040104-62040123 MS.gene07580:intron 45.0%
!! ATATTTCTAGGCCTGGACAG+CGG + chr1.2:62039942-62039961 MS.gene07580:intron 45.0%
!! GAGTAAGGGGGTTTTAGTCT+TGG + chr1.2:62040771-62040790 MS.gene07580:intron 45.0%
!! GAGTTATCAGTTGGTGTCGA+AGG + chr1.2:62039502-62039521 MS.gene07580:CDS 45.0%
!! GAGTTGGTAAGAGTTGGAGT+TGG - chr1.2:62041046-62041065 None:intergenic 45.0%
!! TTATCAGTTGGTGTCGAAGG+TGG + chr1.2:62039505-62039524 MS.gene07580:CDS 45.0%
!!! GACTGCTATTTTGACACCGA+CGG - chr1.2:62040013-62040032 None:intergenic 45.0%
!!! TAAGGGGGTTTTAGTCTTGG+CGG + chr1.2:62040774-62040793 MS.gene07580:intron 45.0%
!! ATATATATATATATATATAC+GGG - chr1.2:62041317-62041336 None:intergenic 5.0%
!! GTATATATATATATATATAT+AGG + chr1.2:62041317-62041336 MS.gene07580:intron 5.0%
AAACAGGCAGAGAAGAGGAG+AGG - chr1.2:62041483-62041502 None:intergenic 50.0%
AACAGGCAGAGAAGAGGAGA+GGG - chr1.2:62041482-62041501 None:intergenic 50.0%
ACATTGGGGAAGTGGCGAAT+TGG - chr1.2:62041559-62041578 None:intergenic 50.0%
AGAAACGACAGAGTCTCTGC+CGG - chr1.2:62037435-62037454 None:intergenic 50.0%
AGCTTACTAGGCCACATGTG+TGG + chr1.2:62038737-62038756 MS.gene07580:intron 50.0%
ATGGGGGAGTTCTTCAGTTC+AGG + chr1.2:62039649-62039668 MS.gene07580:CDS 50.0%
ATGTCCAGTGTCCACACATG+TGG - chr1.2:62040910-62040929 None:intergenic 50.0%
CATTGGGGAAGTGGCGAATT+GGG - chr1.2:62041558-62041577 None:intergenic 50.0%
CATTTGCAGCACCGTCGTAA+CGG - chr1.2:62041664-62041683 None:intergenic 50.0%
CGTCCTGTGGAGTTATCAGT+TGG + chr1.2:62039493-62039512 MS.gene07580:CDS 50.0%
CTGCTAACTCATTGGGGTCA+GGG - chr1.2:62040239-62040258 None:intergenic 50.0%
CTTGGGTGAAGAGCTGAAGT+TGG - chr1.2:62040289-62040308 None:intergenic 50.0%
GAATCTACAGTTTCGGCGGT+TGG + chr1.2:62040048-62040067 MS.gene07580:CDS 50.0%
GAGATTCAGGATTTGCCGGA+AGG + chr1.2:62037368-62037387 MS.gene07580:CDS 50.0%
GCGCTAACTAACCTGGAATC+AGG - chr1.2:62037847-62037866 None:intergenic 50.0%
GGATAGTTGGGTGAGGATCT+TGG - chr1.2:62040307-62040326 None:intergenic 50.0%
GGATTCCTTTGCCTGATTCC+AGG + chr1.2:62037833-62037852 MS.gene07580:CDS 50.0%
GGGTGGTTGGAGATTGAGAT+GGG + chr1.2:62039631-62039650 MS.gene07580:CDS 50.0%
GGTGGTTGGAGATTGAGATG+GGG + chr1.2:62039632-62039651 MS.gene07580:CDS 50.0%
GTCCTAGTGTGAGAAGCGAT+GGG + chr1.2:62039611-62039630 MS.gene07580:CDS 50.0%
GTGGTTGGAGATTGAGATGG+GGG + chr1.2:62039633-62039652 MS.gene07580:CDS 50.0%
TCGACATTGCTATGTGCCTC+AGG - chr1.2:62038963-62038982 None:intergenic 50.0%
TCTGCTAACTCATTGGGGTC+AGG - chr1.2:62040240-62040259 None:intergenic 50.0%
TGCTAACTCATTGGGGTCAG+GGG - chr1.2:62040238-62040257 None:intergenic 50.0%
TGGGTGGTTGGAGATTGAGA+TGG + chr1.2:62039630-62039649 MS.gene07580:CDS 50.0%
! ATTTGGGTTTGAACCCGAGG+TGG - chr1.2:62038290-62038309 None:intergenic 50.0%
!! TGGCGGTTTGACGGTTTTAG+CGG + chr1.2:62040068-62040087 MS.gene07580:CDS 50.0%
AATCCACAACCGACAGTGGC+CGG - chr1.2:62040102-62040121 None:intergenic 55.0%
ATGGCGGCAATGCATCCTTC+CGG - chr1.2:62037386-62037405 None:intergenic 55.0%
ATGGCTAGCAGCTACCACCT+CGG + chr1.2:62038273-62038292 MS.gene07580:intron 55.0%
CACCCATCGCTTCTCACACT+AGG - chr1.2:62039616-62039635 None:intergenic 55.0%
CGGGTTTCGGGCTCAAAACT+CGG + chr1.2:62039976-62039995 MS.gene07580:CDS 55.0%
CGTCCTAGTGTGAGAAGCGA+TGG + chr1.2:62039610-62039629 MS.gene07580:CDS 55.0%
CTAGTGTGAGAAGCGATGGG+TGG + chr1.2:62039614-62039633 MS.gene07580:CDS 55.0%
CTCGGAACCGTTCAAACCGT+CGG + chr1.2:62039994-62040013 MS.gene07580:CDS 55.0%
GCACCGTCGTAACGGTATCT+CGG - chr1.2:62041656-62041675 None:intergenic 55.0%
GGATCCAGTGTCCACACATG+TGG - chr1.2:62038751-62038770 None:intergenic 55.0%
GGGATTTCAGAACCGTCCTG+TGG + chr1.2:62039480-62039499 MS.gene07580:CDS 55.0%
GTTCGGTTGCCGCAGCAATT+AGG - chr1.2:62040420-62040439 None:intergenic 55.0%
TAGGCCACATGTGTGGACAC+TGG + chr1.2:62038744-62038763 MS.gene07580:intron 55.0%
TCTACAGTTTCGGCGGTTGG+CGG + chr1.2:62040051-62040070 MS.gene07580:CDS 55.0%
TGTGAGAAGCGATGGGTGGT+TGG + chr1.2:62039618-62039637 MS.gene07580:CDS 55.0%
TTGGCGCTCCAAGCTGAAGT+TGG - chr1.2:62038457-62038476 None:intergenic 55.0%
! TTGGGGCACCAAGCTGAAGT+TGG - chr1.2:62040337-62040356 None:intergenic 55.0%
!! CGTTACGACGGTGCTGCAAA+TGG + chr1.2:62041662-62041681 MS.gene07580:CDS 55.0%
!! GGCGGTTTGACGGTTTTAGC+GGG + chr1.2:62040069-62040088 MS.gene07580:CDS 55.0%
!! GGTTTGACGGTTTTAGCGGG+TGG + chr1.2:62040072-62040091 MS.gene07580:CDS 55.0%
!! GTAGGAGCGTTGGCGAGTAA+AGG - chr1.2:62037542-62037561 None:intergenic 55.0%
!! TGACGGTTTTAGCGGGTGGT+CGG + chr1.2:62040076-62040095 MS.gene07580:intron 55.0%
CCTCCGATTCCGACGCTGTA+TGG + chr1.2:62037471-62037490 MS.gene07580:CDS 60.0%
CGTACAACTCCACTCGACGC+CGG + chr1.2:62037413-62037432 MS.gene07580:CDS 60.0%
CGTCGGAATCGGAGGCTGAT+CGG - chr1.2:62037466-62037485 None:intergenic 60.0%
GAGGTGGTAGCTGCTAGCCA+TGG - chr1.2:62038274-62038293 None:intergenic 60.0%
TGGCTAGCAGCTACCACCTC+GGG + chr1.2:62038274-62038293 MS.gene07580:intron 60.0%
TTCGGCGGTTGGCGGTTTGA+CGG + chr1.2:62040059-62040078 MS.gene07580:CDS 60.0%
TTCTAGGCCTGGACAGCGGA+CGG + chr1.2:62039946-62039965 MS.gene07580:intron 60.0%
! CCATACAGCGTCGGAATCGG+AGG - chr1.2:62037474-62037493 None:intergenic 60.0%
! GGTCGGTTTCCGCAGCAATC+AGG - chr1.2:62038537-62038556 None:intergenic 60.0%
! TTTTGAGCCCGAAACCCGCC+CGG - chr1.2:62039974-62039993 None:intergenic 60.0%
!! GGTTTTAGCGGGTGGTCGGC+CGG + chr1.2:62040080-62040099 MS.gene07580:intron 65.0%
CCTGGACAGCGGACGGTTCC+GGG + chr1.2:62039953-62039972 MS.gene07580:intron 70.0%
GCCTGGACAGCGGACGGTTC+CGG + chr1.2:62039952-62039971 MS.gene07580:intron 70.0%
! GACGGTTCCGGGCGGGTTTC+GGG + chr1.2:62039964-62039983 MS.gene07580:CDS 70.0%
! GAGTCTCTGCCGGCGTCGAG+TGG - chr1.2:62037425-62037444 None:intergenic 70.0%
! GGACGGTTCCGGGCGGGTTT+CGG + chr1.2:62039963-62039982 MS.gene07580:CDS 70.0%
CCCGGAACCGTCCGCTGTCC+AGG - chr1.2:62039956-62039975 None:intergenic 75.0%
GACAGCGGACGGTTCCGGGC+GGG + chr1.2:62039957-62039976 MS.gene07580:intron 75.0%
GGACAGCGGACGGTTCCGGG+CGG + chr1.2:62039956-62039975 MS.gene07580:intron 75.0%
GGTGGTCGGCCGGCCACTGT+CGG + chr1.2:62040090-62040109 MS.gene07580:intron 75.0%
! CGGCCGGCCACTGTCGGTTG+TGG + chr1.2:62040096-62040115 MS.gene07580:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 62037362 62041692 62037362 ID=MS.gene07580
chr1.2 mRNA 62037362 62041692 62037362 ID=MS.gene07580.t1;Parent=MS.gene07580
chr1.2 exon 62037362 62037622 62037362 ID=MS.gene07580.t1.exon1;Parent=MS.gene07580.t1
chr1.2 CDS 62037362 62037622 62037362 ID=cds.MS.gene07580.t1;Parent=MS.gene07580.t1
chr1.2 exon 62037736 62037854 62037736 ID=MS.gene07580.t1.exon2;Parent=MS.gene07580.t1
chr1.2 CDS 62037736 62037854 62037736 ID=cds.MS.gene07580.t1;Parent=MS.gene07580.t1
chr1.2 exon 62039354 62039718 62039354 ID=MS.gene07580.t1.exon3;Parent=MS.gene07580.t1
chr1.2 CDS 62039354 62039718 62039354 ID=cds.MS.gene07580.t1;Parent=MS.gene07580.t1
chr1.2 exon 62039962 62040093 62039962 ID=MS.gene07580.t1.exon4;Parent=MS.gene07580.t1
chr1.2 CDS 62039962 62040093 62039962 ID=cds.MS.gene07580.t1;Parent=MS.gene07580.t1
chr1.2 exon 62041586 62041692 62041586 ID=MS.gene07580.t1.exon5;Parent=MS.gene07580.t1
chr1.2 CDS 62041586 62041692 62041586 ID=cds.MS.gene07580.t1;Parent=MS.gene07580.t1
Gene Sequence

>MS.gene07580

ATGACAGAGATTCAGGATTTGCCGGAAGGATGCATTGCCGCCATAGTCTCTCGTACAACTCCACTCGACGCCGGCAGAGACTCTGTCGTTTCTAAGACTTTCCGATCAGCCTCCGATTCCGACGCTGTATGGAATCGTTTTCTACCTTCTGATATTTCATCTATCATCTCAGGGTCTCCTTTACTCGCCAACGCTCCTACCAAAAAAGATCTCTATCTTGCTCTATCTGATCGCCCTGTCATCATCGATCATGATAATAAGGTGGTATTCTTCTTCCTAACCGTCAATTTATCGAATATTAAGGCTCATAATTGAATTGATTTTTTTAAGATGTTTAGTTCAGAATACGTTAACAAGCCTTCAAAAATTTTCAGAGTTTTCAATTGGTTAGAAAGAGTGGAAAAAAGTGTTACATGCTTTCTGCTAGATCTCTTGCAATTGTTTGGGGTGATACTAAGCACTATTGGAACTGGATTCCTTTGCCTGATTCCAGGTTAGTTAGCGCTTAACTTTTCTATATTTTTTCTTAATATATCTTGATTAACTCCTAATTAATACTAGATACTATTTCTTGTTCACCGAATCAAACCAGTACCGATTAAGGTCTCTTTGGTAAGATGCATATTTGAGTTTATAGCATAATAAGTCATCCGCTATAAGCTAGCCTATCAACTATCCACTATTTTTTACCAAACAAAGCCTTGTCATTTTTTATGGGCTTGAATGATTCTATTTGCCATGTTAGTGATCAATTACTGATGATGGGTTTTAGGGCATTCAAAAAGAATAACAAAAAGGTTGAATATGCTCTTTCCTCATCTGCTAAGAATTAACCGACTTTTGCCATCTTCTAATCCAAGTTAGTGAAGAATAGTTGGTGTGGTGTTAGGCCATACCATATATCAAAATCCATGGCTAGCAGCTACCACCTCGGGTTCAAACCCAAATTTTAAGCATGTTCAATCAAACAAGTGCTTGCAAAAATTTCTGATGGCCTTGTGACTTAGAGAATTTGGAGTCTGTTCCTCCATATCACTTCAGCTAAGTGTCAGCAACATGTATGCGTGCTCTTCATTCAACTATCTTTTGCAACCAACTTCAGCTTGGAGCGCCAAGATCCTTCTTCTGTAACTCTGCAGTTTTTGCTTCATCTGCAGACTTTCTTTTTTGATCCTGATTGCTGCGGAAACCGACCCTATATATTTTTGAATGCATCATTTTACCAAATTTTAAAATATCTGACCAATTTGTTTGTTACTTTACAACTAAAGACGTAGTTCTTATTTTAAGACTTCATCCTTAGTCCTTACACTATCTGGCCTATGTAGAAGCTTACTAGGGTAACTTCATCCTTACACTATCAGGCCTATGTAGAAGCTTACTAGGCCACATGTGTGGACACTGGATCCACATTGAAGATGCTACATGTAGCCATGTTTTCTTAGAAATTTTACTTTTTATCAAGAAATCCCATCAAATTACCTTGGCCATTCAATCTTTTGCATAAGGTTGTCATTTGTCCAACTCCAACTCCAACTCTTATTTTGTGACAATCATGCAGTTGTCTATATTGCTTATATCCACACTTATCACGAGAACCTGAGGCACATAGCAATGTCGATGTCCTTTTAGGCTTTTAGTATGGGAGAAGATGAATGTTGGATTTCCTAAAACGGCATATATAACTTATTCACTAAGAAGTCTGTCATTTAGTTTCAGCTTGAAATACTTCAGTTATGCTTCGTAAAAGCCTGCAATTTTTAGTTAACGATCCTGCATTGTTAATTTATCGACCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATAGATATATATATATACACACACACACACACACTCCATCTGTCATGTAATAAAACACTTTCAACTTTTCTCAGTTATTATGTTCTAATTTTTGCGTCTTTTGTGTACTACTTTTGAACAGGTTCCCTGAAGTTGATAAGCTTGTTGACGTATGTTTGCTAGAAATTCGTGGTGTGATAAACACCGTTGTTCTGTCCCCAAATACTCAATATACAGCTTATGTTGTGTTCAAAATGATTGATGCGTGGGGATTTCAGAACCGTCCTGTGGAGTTATCAGTTGGTGTCGAAGGTGGCCAGAGTAGTACTAAAATTGTCTGTTTGGATCCAAATGTGGAAGTGGAAGGTATGCAGCATAACAGAGCAGTAGGATTGCAACGTCCTAGTGTGAGAAGCGATGGGTGGTTGGAGATTGAGATGGGGGAGTTCTTCAGTTCAGGCATAGAAAATGAAGAAGTCCTGATGAGTTTGTTGGAGATAAAGGCTGGTAATTGGAAGAGTGGTCTCTTTCTTGAAGGAATAGAAATTAGGCCTAAGTAACACAATTAAGCAGCATTTACTATACTATGCAATAGGTCTTGTGTCTTGGATAGCAGAATAATGTTTGAAGAGTTGAAGTCCCAACTTTTCAACATACTATATATATTATCGTTCCAAACAATGTCTTCGTATAGTATATCCACACTTTATATTGTTTATTGCTGTTCAGTATATTTCTAGGCCTGGACAGCGGACGGTTCCGGGCGGGTTTCGGGCTCAAAACTCGGAACCGTTCAAACCGTCGGTGTCAAAATAGCAGTCTGTTACCGTCCAAGTGAATCTACAGTTTCGGCGGTTGGCGGTTTGACGGTTTTAGCGGGTGGTCGGCCGGCCACTGTCGGTTGTGGATTAAAGGGTAAACAGTGTTTTTAGCCCCTGTAATATAGTGCACTTTTGGTTTTAGCCCCTGTAAAATTTTTTTTTTAGATTCCACCCTTGTAAAATGAAGATTCTTCAGGATTGGCCCCTGACCCCAATGAGTTAGCAGAATCTTTGACCCAACTATCCTTTGCATCCAACTTCAGCTCTTCACCCAAGATCCTCACCCAACTATCCTTTGCATCCAACTTCAGCTTGGTGCCCCAAAATCCTTCTTCTGTAGCTTTGCTGTTTTTGCTTCATCTGCAGACTTTCCTTTTTTGTGATCCTAATTGCTGCGGCAACCGAACCTATTTATTTTTTAATGCATCATTTTACCAAAATTTTTAAAAATCAGACCAATTTGCTTGTTACTTTACAACTAAAATGTAGTTCTTATTTTAAGACTTGTTATTTCTACACATGTTCATGGTCACCATTTTTGTCGTGCTCACTACACTCAAGCTGTATTGAATTCCCCATTTTCTGACATTTGCTCCACATAATTTAGTTTCAAAAAGTTGAACAATGTACTCAATAATCTCGAGTTGACTATTATTCTCCAAAATGTTTTTACTTTTAGTGTGACTGGTAGAATACATACAATTTCTAGACCTGCATCAGTTATGATGCCAACTAAATGAGTAAGGGGGTTTTAGTCTTGGCGGTCGTAGTCTTCATCTTGATACAGTCTGTTATCTGCTCAGATATTTGAAATGAACAGTTGGCTAGGTAACTTCATCCTTACACTATCAGGCCTATGTAGAAGTTTACTAGGCCACATGTGTGGACACTGGACATACATTGAAGATGCACAGCATGTACCCATGTTTTCTTTGAGACTTAACGTATTGTTATGGAATCCCATTGAATTACCTTGGCTATTATATCTTTTGCATAATGTTGTCATTTGTCCAACTCCAACTCTTACCAACTCTTATGTTGTGACAATCAAGCAGTTGTATATATTGCTTATATATACACACTTATCATGAGAAAGTGAGGCATGTAGAAAAGTCGATGTCCTTTAAGTATGGGAGAAAATGAATGTTGGATTTCCTGAAACAGCATATATTACTTATTCACTGAGAAGTCTGTCATTTTGTTTCAGCTTGAAATACTTAAGTTGTGCTTCGTAACAGCCTCCAATTTTTAGTTAACGATCCTGCACTGTTAATTTATCAGCCCGTATATATATATATATATATAGGACATATCAAGTGAGAGGAGTGGTTATAATGAGAGATGAGAGGCTTAAATAATAACCATTAGATCATAATCAATGGTTAGGATTAAAGTAGTCATAAAAATTGCAAATGCACGGGATCACTTATCTCCAACTATCTTCTTCCCTCTCCTCTTCTCTGCCTGTTTCCATTGTTGAAGATTAATGTTGAAAAATCAATTGGAATTCTGAATTTGAAAACCCAATTCGCCACTTCCCCAATGTTTACAAGCACATAAAAAGCATTATAATGCTCAAGAATCATCTCGTAAAAAAGAACTGTCAGAGACCAAAAAATACCGAGATACCGTTACGACGGTGCTGCAAATGGCTTCTTGA
Protein sequence

>MS.gene07580.t1

MTEIQDLPEGCIAAIVSRTTPLDAGRDSVVSKTFRSASDSDAVWNRFLPSDISSIISGSPLLANAPTKKDLYLALSDRPVIIDHDNKSFQLVRKSGKKCYMLSARSLAIVWGDTKHYWNWIPLPDSRFPEVDKLVDVCLLEIRGVINTVVLSPNTQYTAYVVFKMIDAWGFQNRPVELSVGVEGGQSSTKIVCLDPNVEVEGMQHNRAVGLQRPSVRSDGWLEIEMGEFFSSGIENEEVLMSLLEIKAADGSGRVSGSKLGTVQTVGVKIAVCYRPSESTVSAVGGLTVLAGAHKKHYNAQESSRKKELSETKKYRDTVTTVLQMAS