Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74878.t1 | XP_003590891.2 | 88.8 | 269 | 28 | 1 | 1 | 269 | 1 | 267 | 2.90E-131 | 478 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74878.t1 | Q9ZVQ6 | 45.0 | 262 | 130 | 5 | 8 | 266 | 18 | 268 | 3.5e-61 | 236.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74878.t1 | G7I5M1 | 88.8 | 269 | 28 | 1 | 1 | 269 | 1 | 267 | 2.1e-131 | 478.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74878.t1 | MTR_1g079380 | 88.848 | 269 | 28 | 1 | 1 | 269 | 1 | 267 | 5.19e-164 | 456 |
MS.gene74878.t1 | MTR_1g079370 | 82.397 | 267 | 45 | 1 | 1 | 267 | 1 | 265 | 7.09e-161 | 447 |
MS.gene74878.t1 | MTR_1g079180 | 72.593 | 270 | 66 | 3 | 1 | 267 | 1 | 265 | 5.19e-142 | 399 |
MS.gene74878.t1 | MTR_1g079260 | 67.870 | 277 | 80 | 3 | 1 | 270 | 1 | 275 | 1.21e-134 | 381 |
MS.gene74878.t1 | MTR_1g079460 | 68.498 | 273 | 79 | 3 | 1 | 270 | 1 | 269 | 4.06e-130 | 369 |
MS.gene74878.t1 | MTR_1g079200 | 68.773 | 269 | 77 | 4 | 1 | 267 | 1 | 264 | 1.65e-129 | 368 |
MS.gene74878.t1 | MTR_1g100597 | 67.266 | 278 | 80 | 3 | 1 | 270 | 1 | 275 | 6.71e-129 | 367 |
MS.gene74878.t1 | MTR_1g079230 | 62.094 | 277 | 97 | 2 | 1 | 270 | 1 | 276 | 3.58e-119 | 342 |
MS.gene74878.t1 | MTR_1g079850 | 61.189 | 286 | 93 | 4 | 1 | 270 | 1 | 284 | 1.09e-114 | 331 |
MS.gene74878.t1 | MTR_1g100613 | 66.939 | 245 | 69 | 2 | 15 | 248 | 1 | 244 | 8.18e-112 | 322 |
MS.gene74878.t1 | MTR_3g452600 | 62.963 | 270 | 88 | 6 | 4 | 270 | 10 | 270 | 1.72e-110 | 320 |
MS.gene74878.t1 | MTR_1g079250 | 60.284 | 282 | 99 | 5 | 1 | 270 | 1 | 281 | 2.43e-105 | 308 |
MS.gene74878.t1 | MTR_3g006850 | 56.026 | 307 | 90 | 6 | 4 | 270 | 17 | 318 | 2.64e-102 | 301 |
MS.gene74878.t1 | MTR_1g026510 | 55.052 | 287 | 111 | 6 | 1 | 270 | 1 | 286 | 2.54e-100 | 295 |
MS.gene74878.t1 | MTR_3g450990 | 56.993 | 286 | 95 | 8 | 4 | 270 | 10 | 286 | 1.97e-98 | 290 |
MS.gene74878.t1 | MTR_1g079410 | 54.815 | 270 | 112 | 4 | 4 | 267 | 8 | 273 | 3.73e-98 | 289 |
MS.gene74878.t1 | MTR_2g079100 | 59.696 | 263 | 94 | 3 | 4 | 264 | 9 | 261 | 1.74e-96 | 284 |
MS.gene74878.t1 | MTR_1g079350 | 54.874 | 277 | 113 | 6 | 1 | 267 | 1 | 275 | 2.80e-92 | 274 |
MS.gene74878.t1 | MTR_1g079140 | 49.329 | 298 | 115 | 6 | 3 | 267 | 12 | 306 | 4.36e-90 | 270 |
MS.gene74878.t1 | MTR_1g079340 | 53.082 | 292 | 106 | 9 | 1 | 267 | 40 | 325 | 2.29e-84 | 255 |
MS.gene74878.t1 | MTR_1g078470 | 65.946 | 185 | 52 | 4 | 83 | 267 | 11 | 184 | 4.09e-79 | 237 |
MS.gene74878.t1 | MTR_7g096300 | 54.183 | 251 | 100 | 5 | 1 | 245 | 1 | 242 | 1.56e-77 | 249 |
MS.gene74878.t1 | MTR_1g079400 | 45.965 | 285 | 116 | 5 | 4 | 267 | 12 | 279 | 1.95e-75 | 231 |
MS.gene74878.t1 | MTR_7g112550 | 43.509 | 285 | 138 | 8 | 2 | 268 | 5 | 284 | 2.14e-68 | 213 |
MS.gene74878.t1 | MTR_1g079240 | 58.470 | 183 | 63 | 4 | 85 | 267 | 10 | 179 | 1.20e-59 | 187 |
MS.gene74878.t1 | MTR_1g083580 | 38.571 | 280 | 154 | 7 | 2 | 267 | 6 | 281 | 1.65e-58 | 188 |
MS.gene74878.t1 | MTR_7g112560 | 38.258 | 264 | 150 | 7 | 7 | 267 | 4 | 257 | 1.69e-53 | 174 |
MS.gene74878.t1 | MTR_1g076870 | 61.194 | 134 | 36 | 1 | 128 | 245 | 2 | 135 | 2.11e-49 | 160 |
MS.gene74878.t1 | MTR_4g023570 | 36.742 | 264 | 134 | 8 | 7 | 267 | 4 | 237 | 3.80e-47 | 157 |
MS.gene74878.t1 | MTR_1g079350 | 50.299 | 167 | 72 | 4 | 1 | 159 | 1 | 164 | 1.41e-44 | 150 |
MS.gene74878.t1 | MTR_1g079130 | 45.641 | 195 | 72 | 5 | 101 | 267 | 1 | 189 | 1.64e-44 | 149 |
MS.gene74878.t1 | MTR_1g079210 | 56.800 | 125 | 38 | 2 | 129 | 239 | 7 | 129 | 2.58e-38 | 131 |
MS.gene74878.t1 | MTR_7g096310 | 50.000 | 154 | 61 | 4 | 38 | 185 | 19 | 162 | 3.47e-36 | 127 |
MS.gene74878.t1 | MTR_3g058640 | 61.765 | 102 | 37 | 1 | 128 | 229 | 7 | 106 | 3.49e-35 | 122 |
MS.gene74878.t1 | MTR_1g078460 | 68.889 | 90 | 28 | 0 | 1 | 90 | 64 | 153 | 6.12e-35 | 123 |
MS.gene74878.t1 | MTR_2g042540 | 60.000 | 105 | 40 | 2 | 1 | 103 | 1 | 105 | 1.37e-33 | 119 |
MS.gene74878.t1 | MTR_7g103380 | 27.500 | 280 | 171 | 8 | 4 | 266 | 19 | 283 | 7.94e-28 | 108 |
MS.gene74878.t1 | MTR_0113s0040 | 35.329 | 167 | 101 | 4 | 2 | 165 | 20 | 182 | 6.52e-26 | 103 |
MS.gene74878.t1 | MTR_1g079220 | 71.642 | 67 | 17 | 1 | 165 | 231 | 1 | 65 | 3.03e-24 | 93.2 |
MS.gene74878.t1 | MTR_0002s0020 | 31.455 | 213 | 122 | 4 | 4 | 195 | 22 | 231 | 6.42e-24 | 98.2 |
MS.gene74878.t1 | MTR_1g101390 | 36.424 | 151 | 93 | 2 | 2 | 150 | 26 | 175 | 3.52e-23 | 96.3 |
MS.gene74878.t1 | MTR_5g010800 | 33.526 | 173 | 104 | 6 | 2 | 169 | 15 | 181 | 3.93e-23 | 95.9 |
MS.gene74878.t1 | MTR_4g102770 | 35.374 | 147 | 91 | 2 | 4 | 147 | 19 | 164 | 1.25e-21 | 92.0 |
MS.gene74878.t1 | MTR_4g083970 | 28.947 | 190 | 112 | 5 | 80 | 267 | 122 | 290 | 3.35e-21 | 90.9 |
MS.gene74878.t1 | MTR_1g079390 | 65.385 | 52 | 14 | 2 | 211 | 262 | 8 | 55 | 9.99e-17 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74878.t1 | AT2G02360 | 46.008 | 263 | 128 | 6 | 7 | 266 | 17 | 268 | 1.07e-77 | 236 |
MS.gene74878.t1 | AT1G80110 | 45.076 | 264 | 135 | 6 | 4 | 266 | 1 | 255 | 7.26e-70 | 216 |
MS.gene74878.t1 | AT2G02340 | 40.741 | 270 | 155 | 3 | 1 | 266 | 33 | 301 | 2.19e-69 | 216 |
MS.gene74878.t1 | AT2G02240 | 42.366 | 262 | 140 | 6 | 7 | 266 | 64 | 316 | 1.59e-65 | 207 |
MS.gene74878.t1 | AT2G02250 | 40.602 | 266 | 146 | 7 | 4 | 266 | 47 | 303 | 8.72e-63 | 200 |
MS.gene74878.t1 | AT2G02230 | 35.082 | 305 | 154 | 5 | 7 | 270 | 35 | 336 | 3.20e-59 | 191 |
MS.gene74878.t1 | AT1G09155 | 41.281 | 281 | 142 | 8 | 7 | 267 | 3 | 280 | 3.95e-59 | 190 |
MS.gene74878.t1 | AT2G02350 | 39.405 | 269 | 147 | 7 | 4 | 266 | 24 | 282 | 8.30e-58 | 186 |
MS.gene74878.t1 | AT1G56250 | 41.281 | 281 | 142 | 8 | 7 | 267 | 4 | 281 | 5.25e-54 | 176 |
MS.gene74878.t1 | AT1G56240 | 40.714 | 280 | 143 | 8 | 7 | 266 | 4 | 280 | 9.72e-54 | 176 |
MS.gene74878.t1 | AT2G02320 | 37.687 | 268 | 149 | 8 | 6 | 266 | 42 | 298 | 2.62e-52 | 173 |
MS.gene74878.t1 | AT2G02310 | 33.955 | 268 | 165 | 6 | 4 | 267 | 45 | 304 | 1.79e-48 | 163 |
MS.gene74878.t1 | AT5G24560 | 43.684 | 190 | 94 | 4 | 6 | 192 | 5 | 184 | 2.33e-45 | 151 |
MS.gene74878.t1 | AT2G02300 | 36.029 | 272 | 142 | 7 | 4 | 267 | 34 | 281 | 3.02e-44 | 151 |
MS.gene74878.t1 | AT3G53000 | 28.777 | 278 | 169 | 10 | 4 | 266 | 21 | 284 | 2.17e-29 | 113 |
MS.gene74878.t1 | AT2G02350 | 35.465 | 172 | 98 | 6 | 101 | 266 | 1 | 165 | 8.12e-25 | 97.8 |
MS.gene74878.t1 | AT3G61060 | 32.927 | 164 | 102 | 4 | 6 | 165 | 27 | 186 | 7.45e-24 | 98.2 |
MS.gene74878.t1 | AT3G61060 | 32.927 | 164 | 101 | 5 | 6 | 165 | 27 | 185 | 1.81e-23 | 97.1 |
MS.gene74878.t1 | AT1G12710 | 36.735 | 147 | 87 | 3 | 4 | 147 | 28 | 171 | 1.74e-22 | 94.4 |
MS.gene74878.t1 | AT1G63090 | 33.939 | 165 | 101 | 4 | 4 | 165 | 26 | 185 | 2.67e-22 | 94.0 |
MS.gene74878.t1 | AT5G52120 | 32.620 | 187 | 108 | 6 | 4 | 177 | 21 | 202 | 2.30e-19 | 85.9 |
MS.gene74878.t1 | AT1G12710 | 35.821 | 134 | 80 | 3 | 4 | 134 | 28 | 158 | 2.76e-17 | 80.5 |
MS.gene74878.t1 | AT4G19840 | 30.168 | 179 | 100 | 9 | 92 | 267 | 89 | 245 | 2.22e-13 | 68.6 |
MS.gene74878.t1 | AT1G65390 | 26.630 | 184 | 110 | 6 | 89 | 268 | 249 | 411 | 8.05e-12 | 65.1 |
MS.gene74878.t1 | AT1G33920 | 24.138 | 174 | 105 | 4 | 100 | 267 | 12 | 164 | 1.29e-11 | 62.0 |
Find 70 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGCTGCATATTGAGTATT+TGG | 0.137691 | 1.1:+59017127 | None:intergenic |
TTCAAAATGATTGATGCTTA+TGG | 0.231867 | 1.1:-59017097 | MS.gene74878:CDS |
CTAGATCTCTTGCCATTGTT+TGG | 0.245415 | 1.1:-59018855 | MS.gene74878:CDS |
TAGATCTCTTGCCATTGTTT+GGG | 0.268063 | 1.1:-59018854 | MS.gene74878:CDS |
CATCATCGATCATGATAAAA+AGG | 0.287672 | 1.1:-59019793 | MS.gene74878:intron |
TCAACAAGCTTAGCGACTTC+AGG | 0.333696 | 1.1:+59017199 | None:intergenic |
AAGCTGCATATTGAGTATTT+GGG | 0.334659 | 1.1:+59017128 | None:intergenic |
TGCCAACATTCCTACCAAAA+AGG | 0.349990 | 1.1:-59019847 | MS.gene74878:CDS |
TGATTTCTATGCCTGATTCC+AGG | 0.379925 | 1.1:-59018807 | MS.gene74878:intron |
TGAGGATTACCTTCCACATT+TGG | 0.380026 | 1.1:+59016998 | None:intergenic |
TGAAATGAAGAGCATTCAAT+TGG | 0.397092 | 1.1:-59018914 | MS.gene74878:intron |
GAGAGTCTGCAGGCGTCAAC+TGG | 0.397671 | 1.1:+59019972 | None:intergenic |
CCTCCGACTCCGACGCTGTA+TGG | 0.406187 | 1.1:-59019923 | MS.gene74878:CDS |
TTAAGAGCTAACCTGGAATC+AGG | 0.410946 | 1.1:+59018796 | None:intergenic |
GACAGAGATTCAGGATTTGC+CGG | 0.423087 | 1.1:-59020030 | MS.gene74878:CDS |
CAGTACTAAAATTGTCTGTT+TGG | 0.428985 | 1.1:-59017023 | MS.gene74878:CDS |
CTAAGCTTGTTGATGTGTGT+TGG | 0.438622 | 1.1:-59017189 | MS.gene74878:CDS |
TGGAGTTGTACGAGAGACTA+TGG | 0.443442 | 1.1:+59019992 | None:intergenic |
GTGTGTTGGCTTGAAATTCA+TGG | 0.446205 | 1.1:-59017175 | MS.gene74878:CDS |
GTTGGTTAATTGTTATACTT+AGG | 0.466117 | 1.1:+59016788 | None:intergenic |
TCATCTGTATCAGATTCATC+TGG | 0.472901 | 1.1:+59016867 | None:intergenic |
CAGCCGCACAACACAGTAGT+AGG | 0.476209 | 1.1:-59016977 | MS.gene74878:CDS |
CAACAAGCTTAGCGACTTCA+GGG | 0.483357 | 1.1:+59017200 | None:intergenic |
AAGAGAGGTCTCGTTGTTGA+AGG | 0.488523 | 1.1:-59016824 | MS.gene74878:CDS |
ATGGTGGCAATGCATCCTTC+CGG | 0.489320 | 1.1:+59020011 | None:intergenic |
TGTTCTGCGGATTTATCAGT+TGG | 0.493868 | 1.1:-59017064 | MS.gene74878:CDS |
CATATTGAGTATTTGGGGAC+AGG | 0.495017 | 1.1:+59017134 | None:intergenic |
CGTCCTACTGTGAGAAGCGA+TGG | 0.500006 | 1.1:-59016947 | MS.gene74878:CDS |
ACTACTGTGTTGTGCGGCTG+AGG | 0.503355 | 1.1:+59016980 | None:intergenic |
TTGTTGAAGGAATTGAAGTC+GGG | 0.513229 | 1.1:-59016811 | MS.gene74878:CDS |
GTAGGAATGTTGGCAAGGGA+AGG | 0.521816 | 1.1:+59019855 | None:intergenic |
GGGGTGATGATAGACGCTAT+TGG | 0.532370 | 1.1:-59018834 | MS.gene74878:CDS |
CGTCGGAGTCGGAGGCTGAT+CGG | 0.533050 | 1.1:+59019931 | None:intergenic |
TGGGTGGTTGGAGATTGAGA+TGG | 0.535001 | 1.1:-59016927 | MS.gene74878:CDS |
TGAGTGGTGGTCGTGGTGGT+TGG | 0.545093 | 1.1:-59016847 | MS.gene74878:CDS |
TATCATGATCGATGATGAGA+GGG | 0.554392 | 1.1:+59019799 | None:intergenic |
GAGATTCAGGATTTGCCGGA+AGG | 0.560627 | 1.1:-59020026 | MS.gene74878:CDS |
AGATCTCTTGCCATTGTTTG+GGG | 0.561132 | 1.1:-59018853 | MS.gene74878:CDS |
GGTCGTGGTGGTTGGAAGAG+AGG | 0.562312 | 1.1:-59016839 | MS.gene74878:CDS |
GATTTATCAGTTGGTGTCGA+AGG | 0.564414 | 1.1:-59017055 | MS.gene74878:CDS |
ATGGGCGAGTTCTTCAATCC+AGG | 0.565262 | 1.1:-59016908 | MS.gene74878:CDS |
GGAAACGACGGAGAGTCTGC+AGG | 0.568907 | 1.1:+59019962 | None:intergenic |
TGTGAGAAGCGATGGGTGGT+TGG | 0.573841 | 1.1:-59016939 | MS.gene74878:CDS |
GGAGGCTGATCGGAAAGTGT+TGG | 0.579541 | 1.1:+59019941 | None:intergenic |
GTTGTTGAAGGAATTGAAGT+CGG | 0.579779 | 1.1:-59016812 | MS.gene74878:CDS |
TTATCATGATCGATGATGAG+AGG | 0.588512 | 1.1:+59019798 | None:intergenic |
ATGATAGATGAGATGTCAGA+AGG | 0.589136 | 1.1:+59019888 | None:intergenic |
GGGTGGTTGGAGATTGAGAT+GGG | 0.593294 | 1.1:-59016926 | MS.gene74878:CDS |
ATTCAATTGGAGAGAAAGAG+TGG | 0.595763 | 1.1:-59018901 | MS.gene74878:CDS |
CCATACAGCGTCGGAGTCGG+AGG | 0.596313 | 1.1:+59019923 | None:intergenic |
TTATCAGTTGGTGTCGAAGG+TGG | 0.596520 | 1.1:-59017052 | MS.gene74878:CDS |
AGCTGCATATTGAGTATTTG+GGG | 0.601395 | 1.1:+59017129 | None:intergenic |
ATTCCATACAGCGTCGGAGT+CGG | 0.604075 | 1.1:+59019920 | None:intergenic |
TTTGGTAGGAATGTTGGCAA+GGG | 0.607331 | 1.1:+59019851 | None:intergenic |
ATACAGATGAGTGGTGGTCG+TGG | 0.619250 | 1.1:-59016854 | MS.gene74878:CDS |
TGGATTTCAGAACTGTTCTG+CGG | 0.620211 | 1.1:-59017077 | MS.gene74878:CDS |
TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1.1:-59017011 | MS.gene74878:CDS |
TCTATCATCACCCCAAACAA+TGG | 0.627087 | 1.1:+59018843 | None:intergenic |
AGTATTTGGGGACAGGACGA+TGG | 0.644084 | 1.1:+59017141 | None:intergenic |
GTCCTACTGTGAGAAGCGAT+GGG | 0.647735 | 1.1:-59016946 | MS.gene74878:CDS |
CACCCATCGCTTCTCACAGT+AGG | 0.650219 | 1.1:+59016944 | None:intergenic |
CAGATGAGTGGTGGTCGTGG+TGG | 0.655384 | 1.1:-59016851 | MS.gene74878:CDS |
TCGGAAAGTGTTGGAAACGA+CGG | 0.666718 | 1.1:+59019950 | None:intergenic |
AATCCTACTACTGTGTTGTG+CGG | 0.681890 | 1.1:+59016974 | None:intergenic |
AAAACGATTCCATACAGCGT+CGG | 0.682477 | 1.1:+59019914 | None:intergenic |
TGTTTGGATCCAAATGTGGA+AGG | 0.696224 | 1.1:-59017007 | MS.gene74878:CDS |
CTACTGTGAGAAGCGATGGG+TGG | 0.696678 | 1.1:-59016943 | MS.gene74878:CDS |
ATGAATCTGATACAGATGAG+TGG | 0.742711 | 1.1:-59016863 | MS.gene74878:CDS |
AATCTGATACAGATGAGTGG+TGG | 0.745247 | 1.1:-59016860 | MS.gene74878:CDS |
AGTTGTACGAGAGACTATGG+TGG | 0.755358 | 1.1:+59019995 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTGAGAAAAATAAAAAA+TGG | + | chr1.1:59018480-59018499 | None:intergenic | 10.0% |
!! | AATAATAATAAATGTTGCAT+TGG | + | chr1.1:59018521-59018540 | None:intergenic | 15.0% |
!! | CAATAATAAGTGTATAATAA+TGG | + | chr1.1:59018546-59018565 | None:intergenic | 15.0% |
!!! | ATTAATTTTAACTTGAACAA+AGG | + | chr1.1:59019380-59019399 | None:intergenic | 15.0% |
!!! | GTGACAAATATATTTTTAAA+GGG | + | chr1.1:59017795-59017814 | None:intergenic | 15.0% |
!!! | TGACAAATATATTTTTAAAG+GGG | + | chr1.1:59017794-59017813 | None:intergenic | 15.0% |
!! | AACACCAAATATGAAATATT+TGG | - | chr1.1:59017116-59017135 | MS.gene74878:CDS | 20.0% |
!! | CAGTTTGTAATAATAACAAT+GGG | - | chr1.1:59017455-59017474 | MS.gene74878:intron | 20.0% |
!! | CATTCAAAAATAAATAGGTT+CGG | + | chr1.1:59019220-59019239 | None:intergenic | 20.0% |
!! | GATTAACTCATAATTAATAC+TGG | - | chr1.1:59018076-59018095 | MS.gene74878:intron | 20.0% |
!! | GGTCTGATATTTAAAAAATT+TGG | + | chr1.1:59019253-59019272 | None:intergenic | 20.0% |
!! | TCAACCAAATATTTCATATT+TGG | + | chr1.1:59017123-59017142 | None:intergenic | 20.0% |
!! | TCAGTTTGTAATAATAACAA+TGG | - | chr1.1:59017454-59017473 | MS.gene74878:intron | 20.0% |
!! | TGATGCATTCAAAAATAAAT+AGG | + | chr1.1:59019225-59019244 | None:intergenic | 20.0% |
!! | TTGTAAAGTAACAAACAAAT+TGG | + | chr1.1:59019274-59019293 | None:intergenic | 20.0% |
!!! | ATTAATTGTGTTGATTTTGA+TGG | + | chr1.1:59018639-59018658 | None:intergenic | 20.0% |
!!! | ATTTTTAAAGATACTTCAAC+TGG | - | chr1.1:59018412-59018431 | MS.gene74878:intron | 20.0% |
!!! | GACAAATATATTTTTAAAGG+GGG | + | chr1.1:59017793-59017812 | None:intergenic | 20.0% |
!!! | GATTTTTTAAGATGTTTAGT+TGG | - | chr1.1:59017089-59017108 | MS.gene74878:CDS | 20.0% |
!!! | GGTGACAAATATATTTTTAA+AGG | + | chr1.1:59017796-59017815 | None:intergenic | 20.0% |
!!! | TTTTTCAATTAAGATCACAT+GGG | + | chr1.1:59018349-59018368 | None:intergenic | 20.0% |
!!! | TTTTTTCAATTAAGATCACA+TGG | + | chr1.1:59018350-59018369 | None:intergenic | 20.0% |
! | AAACGACTATTATTTAGAGA+AGG | - | chr1.1:59018688-59018707 | MS.gene74878:intron | 25.0% |
! | AAATAATTCGAAGTTGCAAT+TGG | - | chr1.1:59017264-59017283 | MS.gene74878:intron | 25.0% |
! | AGATGAAAAGGAAAAGAAAA+AGG | + | chr1.1:59017615-59017634 | None:intergenic | 25.0% |
! | ATCATTCAAGCCTATAAAAA+AGG | + | chr1.1:59018777-59018796 | None:intergenic | 25.0% |
! | ATGCAAAGATTAGAAGATAA+TGG | + | chr1.1:59019578-59019597 | None:intergenic | 25.0% |
! | ATTAAATTGCAGGAATGTAA+AGG | + | chr1.1:59017570-59017589 | None:intergenic | 25.0% |
! | GAACATTGATATTAAATTGC+AGG | + | chr1.1:59017580-59017599 | None:intergenic | 25.0% |
! | GAGTTTACATTACCAAAAAT+CGG | - | chr1.1:59017869-59017888 | MS.gene74878:intron | 25.0% |
! | GTACTCGACAAATAAAATAA+TGG | + | chr1.1:59019434-59019453 | None:intergenic | 25.0% |
! | TATAAAAAAGGACATAACTG+TGG | + | chr1.1:59018765-59018784 | None:intergenic | 25.0% |
! | TGCAAAGATTAGAAGATAAT+GGG | + | chr1.1:59019577-59019596 | None:intergenic | 25.0% |
! | TTAAATTGCAGGAATGTAAA+GGG | + | chr1.1:59017569-59017588 | None:intergenic | 25.0% |
! | TTCAAAATGATTGATGCTTA+TGG | - | chr1.1:59019728-59019747 | MS.gene74878:intron | 25.0% |
! | TTGTAATAATAACAATGGGT+TGG | - | chr1.1:59017459-59017478 | MS.gene74878:intron | 25.0% |
!!! | AACTTGTTATTACAAGATGT+TGG | - | chr1.1:59017697-59017716 | MS.gene74878:intron | 25.0% |
!!! | ACAGTTATGTCCTTTTTTAT+AGG | - | chr1.1:59018764-59018783 | MS.gene74878:intron | 25.0% |
!!! | TTTTAACTTGAACAAAGGAA+TGG | + | chr1.1:59019375-59019394 | None:intergenic | 25.0% |
!!! | TTTTTTGATCCTAATTGTTG+CGG | - | chr1.1:59019191-59019210 | MS.gene74878:intron | 25.0% |
AAAACTACCACTAAATCCTA+CGG | + | chr1.1:59017412-59017431 | None:intergenic | 30.0% | |
AACAAGTGCTTGCAAAAATT+TGG | - | chr1.1:59018994-59019013 | MS.gene74878:intron | 30.0% | |
AACATAGTACTTGTTCTTGT+TGG | - | chr1.1:59018114-59018133 | MS.gene74878:intron | 30.0% | |
AAGAGACAATTATTGTGAGA+AGG | + | chr1.1:59018455-59018474 | None:intergenic | 30.0% | |
AAGCTGCATATTGAGTATTT+GGG | + | chr1.1:59019700-59019719 | None:intergenic | 30.0% | |
ACAGTAATTGATCACTAACA+TGG | + | chr1.1:59018808-59018827 | None:intergenic | 30.0% | |
ACATTTGAGCTTACATCTTA+CGG | - | chr1.1:59018180-59018199 | MS.gene74878:intron | 30.0% | |
ACCTTATTAATTGTAGTGAG+TGG | + | chr1.1:59018591-59018610 | None:intergenic | 30.0% | |
AGAAAATTTAAGAGCTAACC+TGG | + | chr1.1:59018039-59018058 | None:intergenic | 30.0% | |
AGAAGAAAGAGAAGATGAAA+AGG | + | chr1.1:59017627-59017646 | None:intergenic | 30.0% | |
AGGCTAATTCTAGTAGTTTA+TGG | - | chr1.1:59018299-59018318 | MS.gene74878:intron | 30.0% | |
ATAATCATTCCTCACTAACT+TGG | + | chr1.1:59018927-59018946 | None:intergenic | 30.0% | |
ATTCCAAATTCTAAGTCACA+GGG | + | chr1.1:59019026-59019045 | None:intergenic | 30.0% | |
CAGTAATTGATCACTAACAT+GGG | + | chr1.1:59018807-59018826 | None:intergenic | 30.0% | |
CAGTACTAAAATTGTCTGTT+TGG | - | chr1.1:59019802-59019821 | MS.gene74878:CDS | 30.0% | |
CATCATCGATCATGATAAAA+AGG | - | chr1.1:59017032-59017051 | MS.gene74878:CDS | 30.0% | |
GACTATTATTTAGAGAAGGA+GGG | - | chr1.1:59018692-59018711 | MS.gene74878:intron | 30.0% | |
GCAAAGATTAGAAGATAATG+GGG | + | chr1.1:59019576-59019595 | None:intergenic | 30.0% | |
GCAACAATTAGGATCAAAAA+AGG | + | chr1.1:59019192-59019211 | None:intergenic | 30.0% | |
TAAGCTGCATATTGAGTATT+TGG | + | chr1.1:59019701-59019720 | None:intergenic | 30.0% | |
TAATACTGGAGACTATTTGA+GGG | - | chr1.1:59018090-59018109 | MS.gene74878:intron | 30.0% | |
TCATTTCAACAATAAGCCTT+AGG | + | chr1.1:59017071-59017090 | None:intergenic | 30.0% | |
TCCACTCACTACAATTAATA+AGG | - | chr1.1:59018587-59018606 | MS.gene74878:intron | 30.0% | |
TGTAATAACAAGTTGTCTCA+TGG | + | chr1.1:59017691-59017710 | None:intergenic | 30.0% | |
TTAATACTGGAGACTATTTG+AGG | - | chr1.1:59018089-59018108 | MS.gene74878:intron | 30.0% | |
TTGACTAAAAAAGACCTGTT+TGG | - | chr1.1:59018216-59018235 | MS.gene74878:intron | 30.0% | |
TTTATGTCCTAAACCATTGA+TGG | - | chr1.1:59017827-59017846 | MS.gene74878:intron | 30.0% | |
! | AAGTTATTTCCTAGTGTCTT+AGG | - | chr1.1:59017351-59017370 | MS.gene74878:intron | 30.0% |
! | AGTCGTTTAAGATTTATGCA+CGG | + | chr1.1:59018676-59018695 | None:intergenic | 30.0% |
! | CATCTTTTGTGTACTACTTT+TGG | - | chr1.1:59019595-59019614 | MS.gene74878:intron | 30.0% |
! | GAATTATTTCTCCTTGTCTT+TGG | + | chr1.1:59017253-59017272 | None:intergenic | 30.0% |
! | TCATGATTATGTTTTCGACA+AGG | - | chr1.1:59017145-59017164 | MS.gene74878:CDS | 30.0% |
!! | CTACTTTTAATATAGACCGT+AGG | - | chr1.1:59017393-59017412 | MS.gene74878:intron | 30.0% |
!! | GTTATTTCTACACATGTTCA+TGG | - | chr1.1:59019323-59019342 | MS.gene74878:intron | 30.0% |
!! | TGAAATGAAGAGCATTCAAT+TGG | - | chr1.1:59017911-59017930 | MS.gene74878:intron | 30.0% |
AAAAAGGACATAACTGTGGA+TGG | + | chr1.1:59018761-59018780 | None:intergenic | 35.0% | |
AAACAGATCCTAATCAGTGA+TGG | + | chr1.1:59018150-59018169 | None:intergenic | 35.0% | |
AATACTGGAGACTATTTGAG+GGG | - | chr1.1:59018091-59018110 | MS.gene74878:intron | 35.0% | |
ACTTGGATGCAAAAGATAGT+TGG | + | chr1.1:59019105-59019124 | None:intergenic | 35.0% | |
AGCACTTGTTTGACTGAATT+TGG | + | chr1.1:59018984-59019003 | None:intergenic | 35.0% | |
AGCTGCATATTGAGTATTTG+GGG | + | chr1.1:59019699-59019718 | None:intergenic | 35.0% | |
ATATAGACCGTAGGATTTAG+TGG | - | chr1.1:59017402-59017421 | MS.gene74878:intron | 35.0% | |
ATGAATCTGATACAGATGAG+TGG | - | chr1.1:59019962-59019981 | MS.gene74878:CDS | 35.0% | |
ATGATAGATGAGATGTCAGA+AGG | + | chr1.1:59016940-59016959 | None:intergenic | 35.0% | |
ATGGTATCCATCAATGGTTT+AGG | + | chr1.1:59017837-59017856 | None:intergenic | 35.0% | |
ATTCAATTGGAGAGAAAGAG+TGG | - | chr1.1:59017924-59017943 | MS.gene74878:intron | 35.0% | |
CAAAAATCGGTGTAAACAGT+TGG | - | chr1.1:59017882-59017901 | MS.gene74878:intron | 35.0% | |
CAAAATGACAGTTACCAAAC+AGG | + | chr1.1:59018233-59018252 | None:intergenic | 35.0% | |
CATCGATCATGATAAAAAGG+TGG | - | chr1.1:59017035-59017054 | MS.gene74878:CDS | 35.0% | |
CGACTATTATTTAGAGAAGG+AGG | - | chr1.1:59018691-59018710 | MS.gene74878:intron | 35.0% | |
CTAGTGTCTTAGGAAATTAC+AGG | - | chr1.1:59017361-59017380 | MS.gene74878:intron | 35.0% | |
CTGTAATTTCCTAAGACACT+AGG | + | chr1.1:59017363-59017382 | None:intergenic | 35.0% | |
CTTGGATGCAAAAGATAGTT+GGG | + | chr1.1:59019104-59019123 | None:intergenic | 35.0% | |
GACAATTATTGTGAGAAGGA+TGG | + | chr1.1:59018451-59018470 | None:intergenic | 35.0% | |
GATACTTAGGTGAAGTGATA+TGG | + | chr1.1:59019057-59019076 | None:intergenic | 35.0% | |
GATATGTGTTGAGGATACTT+AGG | + | chr1.1:59019070-59019089 | None:intergenic | 35.0% | |
GATTCCAAATTCTAAGTCAC+AGG | + | chr1.1:59019027-59019046 | None:intergenic | 35.0% | |
GCACTTGTTTGACTGAATTT+GGG | + | chr1.1:59018983-59019002 | None:intergenic | 35.0% | |
GTTGTTGAAGGAATTGAAGT+CGG | - | chr1.1:59020013-59020032 | MS.gene74878:CDS | 35.0% | |
TAAACTCCATTATCCATCGA+TGG | + | chr1.1:59017856-59017875 | None:intergenic | 35.0% | |
TAATCAGTGATGGCTTGATT+CGG | + | chr1.1:59018140-59018159 | None:intergenic | 35.0% | |
TAGATCTCTTGCCATTGTTT+GGG | - | chr1.1:59017971-59017990 | MS.gene74878:intron | 35.0% | |
TATCATGATCGATGATGAGA+GGG | + | chr1.1:59017029-59017048 | None:intergenic | 35.0% | |
TCATCTGTATCAGATTCATC+TGG | + | chr1.1:59019961-59019980 | None:intergenic | 35.0% | |
TCTACTAATCCAAGTTAGTG+AGG | - | chr1.1:59018915-59018934 | MS.gene74878:intron | 35.0% | |
TGTCGAGTACTTCATCATTA+AGG | - | chr1.1:59019444-59019463 | MS.gene74878:intron | 35.0% | |
TTATCATGATCGATGATGAG+AGG | + | chr1.1:59017030-59017049 | None:intergenic | 35.0% | |
TTGTTGAAGGAATTGAAGTC+GGG | - | chr1.1:59020014-59020033 | MS.gene74878:CDS | 35.0% | |
TTTACTAGTGTCTTAGTGCA+TGG | - | chr1.1:59017328-59017347 | MS.gene74878:intron | 35.0% | |
! | ACTCTTTCATTTTCTATGCC+TGG | + | chr1.1:59019938-59019957 | None:intergenic | 35.0% |
! | AGCAAGATAGAGATCCTTTT+TGG | + | chr1.1:59016995-59017014 | None:intergenic | 35.0% |
! | ATCACTGATTAGGATCTGTT+TGG | - | chr1.1:59018149-59018168 | MS.gene74878:intron | 35.0% |
! | TACTGTTGATGAGTTCTCTT+GGG | - | chr1.1:59018822-59018841 | MS.gene74878:CDS | 35.0% |
! | TTACTGTTGATGAGTTCTCT+TGG | - | chr1.1:59018821-59018840 | MS.gene74878:CDS | 35.0% |
!! | AGATAGAGATCCTTTTTGGT+AGG | + | chr1.1:59016991-59017010 | None:intergenic | 35.0% |
!! | AGATTAGAAGATAATGGGGA+AGG | + | chr1.1:59019572-59019591 | None:intergenic | 35.0% |
!! | ATCCTTTTTGGTAGGAATGT+TGG | + | chr1.1:59016983-59017002 | None:intergenic | 35.0% |
!! | TTTGTGTACTACTTTTGGAC+AGG | - | chr1.1:59019600-59019619 | MS.gene74878:intron | 35.0% |
!!! | AGCTTATAGCGTGTTTTGAT+AGG | - | chr1.1:59018279-59018298 | MS.gene74878:intron | 35.0% |
!!! | CAACTGTTTACACCGATTTT+TGG | + | chr1.1:59017884-59017903 | None:intergenic | 35.0% |
!!! | TAGTGGTAGTTTTTTCTACG+AGG | - | chr1.1:59017419-59017438 | MS.gene74878:intron | 35.0% |
AAAACGATTCCATACAGCGT+CGG | + | chr1.1:59016914-59016933 | None:intergenic | 40.0% | |
AATCCTACTACTGTGTTGTG+CGG | + | chr1.1:59019854-59019873 | None:intergenic | 40.0% | |
AATCTGATACAGATGAGTGG+TGG | - | chr1.1:59019965-59019984 | MS.gene74878:CDS | 40.0% | |
AATTGCAGGAATGTAAAGGG+TGG | + | chr1.1:59017566-59017585 | None:intergenic | 40.0% | |
ACTTAGGTGAAGTGATATGG+AGG | + | chr1.1:59019054-59019073 | None:intergenic | 40.0% | |
ACTTCATCATTAAGGACTGC+TGG | - | chr1.1:59019452-59019471 | MS.gene74878:intron | 40.0% | |
AGATCTCTTGCCATTGTTTG+GGG | - | chr1.1:59017972-59017991 | MS.gene74878:intron | 40.0% | |
AGGACATAAATGTCGATCGA+TGG | + | chr1.1:59017817-59017836 | None:intergenic | 40.0% | |
AGGTGGTATTCTTCTTCCTA+AGG | - | chr1.1:59017052-59017071 | MS.gene74878:CDS | 40.0% | |
AGTCAGTTAATTCGTAGCAG+AGG | + | chr1.1:59018888-59018907 | None:intergenic | 40.0% | |
AGTTCTCTTGGGCATTCAAA+AGG | - | chr1.1:59018833-59018852 | MS.gene74878:CDS | 40.0% | |
CATATTGAGTATTTGGGGAC+AGG | + | chr1.1:59019694-59019713 | None:intergenic | 40.0% | |
CTAGATCTCTTGCCATTGTT+TGG | - | chr1.1:59017970-59017989 | MS.gene74878:intron | 40.0% | |
CTTGTCTTTGGTCGAAATTG+CGG | + | chr1.1:59017241-59017260 | None:intergenic | 40.0% | |
GGAAGGAATCTCAGAAAATG+GGG | + | chr1.1:59019555-59019574 | None:intergenic | 40.0% | |
GGGAAGGAATCTCAGAAAAT+GGG | + | chr1.1:59019556-59019575 | None:intergenic | 40.0% | |
TCTATCATCACCCCAAACAA+TGG | + | chr1.1:59017985-59018004 | None:intergenic | 40.0% | |
TGAGGATTACCTTCCACATT+TGG | + | chr1.1:59019830-59019849 | None:intergenic | 40.0% | |
TGATTTCTATGCCTGATTCC+AGG | - | chr1.1:59018018-59018037 | MS.gene74878:intron | 40.0% | |
TGCCAACATTCCTACCAAAA+AGG | - | chr1.1:59016978-59016997 | MS.gene74878:CDS | 40.0% | |
TGGATACCATCGATGGATAA+TGG | - | chr1.1:59017847-59017866 | MS.gene74878:intron | 40.0% | |
TGGATTTCAGAACTGTTCTG+CGG | - | chr1.1:59019748-59019767 | MS.gene74878:intron | 40.0% | |
TGTAGTGAGCAAGACAGAAA+TGG | + | chr1.1:59019514-59019533 | None:intergenic | 40.0% | |
TGTCCCTGTGACTTAGAATT+TGG | - | chr1.1:59019020-59019039 | MS.gene74878:intron | 40.0% | |
TGTCTGTTTGGATCCAAATG+TGG | - | chr1.1:59019814-59019833 | MS.gene74878:CDS | 40.0% | |
TGTTCTGCGGATTTATCAGT+TGG | - | chr1.1:59019761-59019780 | MS.gene74878:intron | 40.0% | |
TGTTTGGATCCAAATGTGGA+AGG | - | chr1.1:59019818-59019837 | MS.gene74878:CDS | 40.0% | |
TTAAGAGCTAACCTGGAATC+AGG | + | chr1.1:59018032-59018051 | None:intergenic | 40.0% | |
TTTGGTAGGAATGTTGGCAA+GGG | + | chr1.1:59016977-59016996 | None:intergenic | 40.0% | |
! | AAGAGCATGGATATGTGTTG+AGG | + | chr1.1:59019079-59019098 | None:intergenic | 40.0% |
! | ATGTTTTCGACAAGGCAGAT+GGG | - | chr1.1:59017153-59017172 | MS.gene74878:CDS | 40.0% |
! | GAATCAAGCCATCACTGATT+AGG | - | chr1.1:59018139-59018158 | MS.gene74878:intron | 40.0% |
! | TATGTTTTCGACAAGGCAGA+TGG | - | chr1.1:59017152-59017171 | MS.gene74878:CDS | 40.0% |
! | TGAATTTGGGTTTGAACCTG+AGG | + | chr1.1:59018970-59018989 | None:intergenic | 40.0% |
! | TTTTGCATCCAAGTTCAGCT+TGG | - | chr1.1:59019111-59019130 | MS.gene74878:intron | 40.0% |
! | TTTTGGTAGGAATGTTGGCA+AGG | + | chr1.1:59016978-59016997 | None:intergenic | 40.0% |
!! | AGACAATTTTAGTACTGCGC+TGG | + | chr1.1:59019799-59019818 | None:intergenic | 40.0% |
!! | CTAAGCTTGTTGATGTGTGT+TGG | - | chr1.1:59019636-59019655 | MS.gene74878:intron | 40.0% |
!! | GATTTATCAGTTGGTGTCGA+AGG | - | chr1.1:59019770-59019789 | MS.gene74878:intron | 40.0% |
!! | GTGTGTTGGCTTGAAATTCA+TGG | - | chr1.1:59019650-59019669 | MS.gene74878:intron | 40.0% |
AAACTCATAGCAACCACCTC+AGG | - | chr1.1:59018951-59018970 | MS.gene74878:intron | 45.0% | |
AAGAGAGGTCTCGTTGTTGA+AGG | - | chr1.1:59020001-59020020 | MS.gene74878:CDS | 45.0% | |
AAGTGATGTCATAAACCGCG+AGG | - | chr1.1:59017757-59017776 | MS.gene74878:intron | 45.0% | |
AGAGCATATGGGTTCATGAG+TGG | - | chr1.1:59017521-59017540 | MS.gene74878:intron | 45.0% | |
AGATAGTTGGGTGAAGAGCA+TGG | + | chr1.1:59019092-59019111 | None:intergenic | 45.0% | |
AGTTGTACGAGAGACTATGG+TGG | + | chr1.1:59016833-59016852 | None:intergenic | 45.0% | |
CAACAAGCTTAGCGACTTCA+GGG | + | chr1.1:59019628-59019647 | None:intergenic | 45.0% | |
CAGTTAATTCGTAGCAGAGG+AGG | + | chr1.1:59018885-59018904 | None:intergenic | 45.0% | |
CATGAACCCATATGCTCTTG+TGG | + | chr1.1:59017519-59017538 | None:intergenic | 45.0% | |
CCATCGATGGTATCCATCAA+TGG | + | chr1.1:59017843-59017862 | None:intergenic | 45.0% | |
CGCAATTTCGACCAAAGACA+AGG | - | chr1.1:59017239-59017258 | MS.gene74878:intron | 45.0% | |
CGCTACAGAAGAAGGATCTT+GGG | + | chr1.1:59019140-59019159 | None:intergenic | 45.0% | |
GACAGAGATTCAGGATTTGC+CGG | - | chr1.1:59016795-59016814 | MS.gene74878:CDS | 45.0% | |
GACATGCTGCAAAGTGCAAA+GGG | - | chr1.1:59017183-59017202 | MS.gene74878:CDS | 45.0% | |
GCTACAGAAGAAGGATCTTG+GGG | + | chr1.1:59019139-59019158 | None:intergenic | 45.0% | |
GGGGAAGGAATCTCAGAAAA+TGG | + | chr1.1:59019557-59019576 | None:intergenic | 45.0% | |
TCAACAAGCTTAGCGACTTC+AGG | + | chr1.1:59019629-59019648 | None:intergenic | 45.0% | |
TCATCATTAAGGACTGCTGG+TGG | - | chr1.1:59019455-59019474 | MS.gene74878:intron | 45.0% | |
TGGAGTTGTACGAGAGACTA+TGG | + | chr1.1:59016836-59016855 | None:intergenic | 45.0% | |
! | ATTTGGGTTTGAACCTGAGG+TGG | + | chr1.1:59018967-59018986 | None:intergenic | 45.0% |
! | CCATTGATGGATACCATCGA+TGG | - | chr1.1:59017840-59017859 | MS.gene74878:intron | 45.0% |
! | GGAAAAGCTGATGATGTTCG+TGG | - | chr1.1:59019485-59019504 | MS.gene74878:intron | 45.0% |
!! | TCGGAAAGTGTTGGAAACGA+CGG | + | chr1.1:59016878-59016897 | None:intergenic | 45.0% |
!! | TTATCAGTTGGTGTCGAAGG+TGG | - | chr1.1:59019773-59019792 | MS.gene74878:intron | 45.0% |
AACTGCAGCGCTACAGAAGA+AGG | + | chr1.1:59019148-59019167 | None:intergenic | 50.0% | |
AGTATTTGGGGACAGGACGA+TGG | + | chr1.1:59019687-59019706 | None:intergenic | 50.0% | |
ATACAGATGAGTGGTGGTCG+TGG | - | chr1.1:59019971-59019990 | MS.gene74878:CDS | 50.0% | |
ATGGGCGAGTTCTTCAATCC+AGG | - | chr1.1:59019917-59019936 | MS.gene74878:CDS | 50.0% | |
ATGGTGGCAATGCATCCTTC+CGG | + | chr1.1:59016817-59016836 | None:intergenic | 50.0% | |
CGACATGCTGCAAAGTGCAA+AGG | - | chr1.1:59017182-59017201 | MS.gene74878:CDS | 50.0% | |
GAACCCATATGCTCTTGTGG+CGG | + | chr1.1:59017516-59017535 | None:intergenic | 50.0% | |
GAAGTTGCAATTGGAGCGCA+TGG | - | chr1.1:59017273-59017292 | MS.gene74878:intron | 50.0% | |
GAGATTCAGGATTTGCCGGA+AGG | - | chr1.1:59016799-59016818 | MS.gene74878:CDS | 50.0% | |
GCAGGAATGTAAAGGGTGGT+TGG | + | chr1.1:59017562-59017581 | None:intergenic | 50.0% | |
GCGCTACAGAAGAAGGATCT+TGG | + | chr1.1:59019141-59019160 | None:intergenic | 50.0% | |
GGGGTGATGATAGACGCTAT+TGG | - | chr1.1:59017991-59018010 | MS.gene74878:intron | 50.0% | |
GGGTGGTTGGAGATTGAGAT+GGG | - | chr1.1:59019899-59019918 | MS.gene74878:CDS | 50.0% | |
GTAGGAATGTTGGCAAGGGA+AGG | + | chr1.1:59016973-59016992 | None:intergenic | 50.0% | |
GTCCTACTGTGAGAAGCGAT+GGG | - | chr1.1:59019879-59019898 | MS.gene74878:CDS | 50.0% | |
GTTCGGTTGCCGCAACAATT+AGG | + | chr1.1:59019203-59019222 | None:intergenic | 50.0% | |
TGGGTGGTTGGAGATTGAGA+TGG | - | chr1.1:59019898-59019917 | MS.gene74878:CDS | 50.0% | |
TTGGGGATCCAAGCTGAACT+TGG | + | chr1.1:59019122-59019141 | None:intergenic | 50.0% | |
! | ATTCCATACAGCGTCGGAGT+CGG | + | chr1.1:59016908-59016927 | None:intergenic | 50.0% |
ACTACTGTGTTGTGCGGCTG+AGG | + | chr1.1:59019848-59019867 | None:intergenic | 55.0% | |
AGGACTGCTGGTGGTCATTG+AGG | - | chr1.1:59019464-59019483 | MS.gene74878:intron | 55.0% | |
CACCCATCGCTTCTCACAGT+AGG | + | chr1.1:59019884-59019903 | None:intergenic | 55.0% | |
CAGCCGCACAACACAGTAGT+AGG | - | chr1.1:59019848-59019867 | MS.gene74878:CDS | 55.0% | |
CGTCCTACTGTGAGAAGCGA+TGG | - | chr1.1:59019878-59019897 | MS.gene74878:CDS | 55.0% | |
CTACTGTGAGAAGCGATGGG+TGG | - | chr1.1:59019882-59019901 | MS.gene74878:CDS | 55.0% | |
GGAGCGCATGGTGACAAACA+AGG | - | chr1.1:59017285-59017304 | MS.gene74878:intron | 55.0% | |
TGTGAGAAGCGATGGGTGGT+TGG | - | chr1.1:59019886-59019905 | MS.gene74878:CDS | 55.0% | |
! | GGAGGCTGATCGGAAAGTGT+TGG | + | chr1.1:59016887-59016906 | None:intergenic | 55.0% |
ATATGCTCTTGTGGCGGCGG+GGG | + | chr1.1:59017510-59017529 | None:intergenic | 60.0% | |
CAGATGAGTGGTGGTCGTGG+TGG | - | chr1.1:59019974-59019993 | MS.gene74878:CDS | 60.0% | |
CATATGCTCTTGTGGCGGCG+GGG | + | chr1.1:59017511-59017530 | None:intergenic | 60.0% | |
CCATATGCTCTTGTGGCGGC+GGG | + | chr1.1:59017512-59017531 | None:intergenic | 60.0% | |
CCCATATGCTCTTGTGGCGG+CGG | + | chr1.1:59017513-59017532 | None:intergenic | 60.0% | |
GAGAGTCTGCAGGCGTCAAC+TGG | + | chr1.1:59016856-59016875 | None:intergenic | 60.0% | |
GGAAACGACGGAGAGTCTGC+AGG | + | chr1.1:59016866-59016885 | None:intergenic | 60.0% | |
GGTCGTGGTGGTTGGAAGAG+AGG | - | chr1.1:59019986-59020005 | MS.gene74878:CDS | 60.0% | |
TGAGTGGTGGTCGTGGTGGT+TGG | - | chr1.1:59019978-59019997 | MS.gene74878:CDS | 60.0% | |
! | CCGCCGCCACAAGAGCATAT+GGG | - | chr1.1:59017510-59017529 | MS.gene74878:intron | 60.0% |
CCTCCGACTCCGACGCTGTA+TGG | - | chr1.1:59016902-59016921 | MS.gene74878:CDS | 65.0% | |
CGTCGGAGTCGGAGGCTGAT+CGG | + | chr1.1:59016897-59016916 | None:intergenic | 65.0% | |
GGGGGATCGTTCAAGCCTCG+CGG | + | chr1.1:59017775-59017794 | None:intergenic | 65.0% | |
! | CCATACAGCGTCGGAGTCGG+AGG | + | chr1.1:59016905-59016924 | None:intergenic | 65.0% |
! | CCCGCCGCCACAAGAGCATA+TGG | - | chr1.1:59017509-59017528 | MS.gene74878:intron | 65.0% |
! | TCTTGTGGCGGCGGGGGTGT+TGG | + | chr1.1:59017504-59017523 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 59016793 | 59020054 | 59016793 | ID=MS.gene74878 |
chr1.1 | mRNA | 59016793 | 59020054 | 59016793 | ID=MS.gene74878.t1;Parent=MS.gene74878 |
chr1.1 | exon | 59019794 | 59020054 | 59019794 | ID=MS.gene74878.t1.exon1;Parent=MS.gene74878.t1 |
chr1.1 | CDS | 59019794 | 59020054 | 59019794 | ID=cds.MS.gene74878.t1;Parent=MS.gene74878.t1 |
chr1.1 | exon | 59018808 | 59018926 | 59018808 | ID=MS.gene74878.t1.exon2;Parent=MS.gene74878.t1 |
chr1.1 | CDS | 59018808 | 59018926 | 59018808 | ID=cds.MS.gene74878.t1;Parent=MS.gene74878.t1 |
chr1.1 | exon | 59016793 | 59017225 | 59016793 | ID=MS.gene74878.t1.exon3;Parent=MS.gene74878.t1 |
chr1.1 | CDS | 59016793 | 59017225 | 59016793 | ID=cds.MS.gene74878.t1;Parent=MS.gene74878.t1 |
Gene Sequence |
Protein sequence |