Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67769.t1 | KEH32832.1 | 90.2 | 307 | 28 | 2 | 1 | 306 | 13 | 318 | 2.10E-154 | 555.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67769.t1 | Q9ZVQ6 | 36.1 | 302 | 142 | 8 | 5 | 302 | 14 | 268 | 1.7e-40 | 167.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67769.t1 | A0A072UT85 | 90.2 | 307 | 28 | 2 | 1 | 306 | 13 | 318 | 1.5e-154 | 555.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67769.t1 | MTR_3g006850 | 91.205 | 307 | 25 | 2 | 1 | 306 | 13 | 318 | 0.0 | 553 |
| MS.gene67769.t1 | MTR_1g100597 | 64.145 | 304 | 79 | 6 | 3 | 306 | 2 | 275 | 4.16e-126 | 361 |
| MS.gene67769.t1 | MTR_1g079370 | 60.000 | 300 | 81 | 7 | 5 | 303 | 4 | 265 | 6.08e-113 | 327 |
| MS.gene67769.t1 | MTR_1g079180 | 61.000 | 300 | 78 | 6 | 5 | 303 | 4 | 265 | 9.12e-113 | 327 |
| MS.gene67769.t1 | MTR_1g079230 | 58.746 | 303 | 94 | 4 | 5 | 306 | 4 | 276 | 2.20e-111 | 324 |
| MS.gene67769.t1 | MTR_1g079260 | 58.416 | 303 | 92 | 7 | 3 | 303 | 2 | 272 | 3.89e-109 | 318 |
| MS.gene67769.t1 | MTR_1g079460 | 58.086 | 303 | 89 | 5 | 5 | 306 | 4 | 269 | 3.25e-107 | 313 |
| MS.gene67769.t1 | MTR_1g079850 | 58.632 | 307 | 100 | 6 | 3 | 306 | 2 | 284 | 9.02e-107 | 312 |
| MS.gene67769.t1 | MTR_1g079200 | 58.940 | 302 | 80 | 6 | 5 | 303 | 4 | 264 | 4.40e-104 | 305 |
| MS.gene67769.t1 | MTR_3g452600 | 55.921 | 304 | 89 | 6 | 5 | 306 | 10 | 270 | 1.01e-102 | 301 |
| MS.gene67769.t1 | MTR_1g100613 | 61.597 | 263 | 74 | 6 | 21 | 282 | 5 | 241 | 2.88e-97 | 287 |
| MS.gene67769.t1 | MTR_1g079380 | 58.000 | 300 | 87 | 7 | 5 | 303 | 4 | 265 | 6.14e-96 | 285 |
| MS.gene67769.t1 | MTR_1g026510 | 53.376 | 311 | 112 | 6 | 3 | 306 | 2 | 286 | 6.92e-96 | 285 |
| MS.gene67769.t1 | MTR_1g079250 | 56.169 | 308 | 103 | 8 | 3 | 306 | 2 | 281 | 4.41e-95 | 283 |
| MS.gene67769.t1 | MTR_3g450990 | 50.938 | 320 | 96 | 8 | 5 | 306 | 10 | 286 | 3.24e-88 | 265 |
| MS.gene67769.t1 | MTR_2g079100 | 52.649 | 302 | 90 | 10 | 4 | 300 | 8 | 261 | 8.08e-86 | 259 |
| MS.gene67769.t1 | MTR_1g079350 | 48.553 | 311 | 113 | 8 | 3 | 303 | 2 | 275 | 7.51e-81 | 246 |
| MS.gene67769.t1 | MTR_1g079410 | 45.631 | 309 | 121 | 8 | 2 | 303 | 5 | 273 | 1.09e-74 | 230 |
| MS.gene67769.t1 | MTR_1g079340 | 46.795 | 312 | 128 | 7 | 3 | 303 | 41 | 325 | 1.17e-73 | 229 |
| MS.gene67769.t1 | MTR_7g096300 | 50.505 | 297 | 96 | 9 | 3 | 293 | 2 | 253 | 8.28e-72 | 236 |
| MS.gene67769.t1 | MTR_1g079140 | 43.949 | 314 | 147 | 11 | 5 | 306 | 13 | 309 | 3.77e-65 | 207 |
| MS.gene67769.t1 | MTR_1g079400 | 40.864 | 301 | 137 | 8 | 8 | 303 | 15 | 279 | 1.99e-58 | 189 |
| MS.gene67769.t1 | MTR_1g076870 | 66.000 | 150 | 31 | 5 | 143 | 285 | 2 | 138 | 3.57e-58 | 183 |
| MS.gene67769.t1 | MTR_7g112550 | 40.728 | 302 | 145 | 9 | 8 | 303 | 10 | 283 | 5.61e-52 | 172 |
| MS.gene67769.t1 | MTR_1g078470 | 49.048 | 210 | 68 | 4 | 94 | 303 | 14 | 184 | 7.38e-52 | 169 |
| MS.gene67769.t1 | MTR_1g079350 | 56.494 | 154 | 50 | 3 | 3 | 152 | 2 | 142 | 1.52e-45 | 154 |
| MS.gene67769.t1 | MTR_1g083580 | 34.426 | 305 | 163 | 7 | 5 | 303 | 8 | 281 | 2.02e-43 | 150 |
| MS.gene67769.t1 | MTR_7g112560 | 33.779 | 299 | 152 | 9 | 8 | 304 | 4 | 258 | 1.43e-41 | 145 |
| MS.gene67769.t1 | MTR_1g079240 | 42.152 | 223 | 81 | 5 | 84 | 303 | 2 | 179 | 1.13e-40 | 140 |
| MS.gene67769.t1 | MTR_2g042540 | 64.762 | 105 | 34 | 2 | 4 | 107 | 3 | 105 | 1.09e-35 | 125 |
| MS.gene67769.t1 | MTR_7g096310 | 53.846 | 143 | 47 | 3 | 61 | 201 | 38 | 163 | 1.13e-35 | 127 |
| MS.gene67769.t1 | MTR_4g023570 | 32.886 | 298 | 134 | 9 | 8 | 303 | 4 | 237 | 1.83e-35 | 128 |
| MS.gene67769.t1 | MTR_3g058640 | 51.200 | 125 | 36 | 1 | 143 | 267 | 7 | 106 | 1.58e-32 | 116 |
| MS.gene67769.t1 | MTR_1g078460 | 67.045 | 88 | 26 | 1 | 4 | 91 | 66 | 150 | 1.23e-31 | 115 |
| MS.gene67769.t1 | MTR_1g079210 | 48.507 | 134 | 57 | 3 | 144 | 276 | 7 | 129 | 6.30e-29 | 108 |
| MS.gene67769.t1 | MTR_1g079130 | 38.424 | 203 | 107 | 7 | 105 | 303 | 1 | 189 | 3.88e-27 | 105 |
| MS.gene67769.t1 | MTR_0113s0040 | 27.103 | 214 | 131 | 5 | 2 | 203 | 19 | 219 | 1.25e-16 | 79.0 |
| MS.gene67769.t1 | MTR_7g103380 | 22.973 | 222 | 146 | 5 | 1 | 210 | 15 | 223 | 7.18e-15 | 73.9 |
| MS.gene67769.t1 | MTR_1g079220 | 45.455 | 88 | 23 | 3 | 180 | 267 | 1 | 63 | 3.82e-14 | 67.0 |
| MS.gene67769.t1 | MTR_0002s0020 | 24.561 | 228 | 140 | 6 | 1 | 210 | 18 | 231 | 6.51e-13 | 68.2 |
| MS.gene67769.t1 | MTR_1g101390 | 30.189 | 159 | 94 | 5 | 3 | 159 | 26 | 169 | 7.15e-13 | 68.2 |
| MS.gene67769.t1 | MTR_4g102770 | 29.936 | 157 | 94 | 4 | 7 | 161 | 21 | 163 | 8.43e-13 | 67.8 |
| MS.gene67769.t1 | MTR_1g050352 | 54.930 | 71 | 26 | 2 | 27 | 95 | 46 | 112 | 1.14e-11 | 62.4 |
| MS.gene67769.t1 | MTR_1g079390 | 62.000 | 50 | 17 | 2 | 249 | 298 | 8 | 55 | 1.15e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67769.t1 | AT2G02360 | 36.513 | 304 | 142 | 8 | 3 | 302 | 12 | 268 | 2.69e-50 | 168 |
| MS.gene67769.t1 | AT1G80110 | 37.864 | 309 | 125 | 11 | 6 | 302 | 2 | 255 | 3.49e-49 | 164 |
| MS.gene67769.t1 | AT2G02230 | 32.923 | 325 | 175 | 10 | 5 | 306 | 32 | 336 | 5.52e-46 | 158 |
| MS.gene67769.t1 | AT1G56250 | 38.158 | 304 | 156 | 11 | 8 | 304 | 4 | 282 | 2.24e-45 | 155 |
| MS.gene67769.t1 | AT2G02350 | 32.680 | 306 | 159 | 8 | 1 | 302 | 20 | 282 | 6.74e-43 | 149 |
| MS.gene67769.t1 | AT2G02240 | 35.548 | 301 | 150 | 8 | 3 | 302 | 59 | 316 | 9.54e-43 | 149 |
| MS.gene67769.t1 | AT1G09155 | 37.742 | 310 | 147 | 13 | 8 | 303 | 3 | 280 | 1.70e-42 | 148 |
| MS.gene67769.t1 | AT1G56240 | 36.424 | 302 | 160 | 11 | 8 | 302 | 4 | 280 | 1.24e-41 | 145 |
| MS.gene67769.t1 | AT2G02340 | 33.333 | 309 | 156 | 10 | 3 | 302 | 34 | 301 | 1.39e-41 | 146 |
| MS.gene67769.t1 | AT2G02250 | 32.333 | 300 | 158 | 9 | 5 | 302 | 47 | 303 | 1.16e-39 | 141 |
| MS.gene67769.t1 | AT2G02310 | 31.803 | 305 | 161 | 10 | 3 | 303 | 43 | 304 | 1.28e-38 | 138 |
| MS.gene67769.t1 | AT2G02320 | 31.908 | 304 | 158 | 10 | 4 | 302 | 39 | 298 | 6.38e-35 | 129 |
| MS.gene67769.t1 | AT5G24560 | 37.129 | 202 | 96 | 7 | 5 | 201 | 3 | 178 | 3.80e-31 | 115 |
| MS.gene67769.t1 | AT2G02300 | 30.323 | 310 | 147 | 10 | 3 | 303 | 32 | 281 | 1.34e-29 | 114 |
| MS.gene67769.t1 | AT2G02350 | 30.233 | 172 | 89 | 5 | 135 | 302 | 21 | 165 | 3.16e-16 | 75.5 |
| MS.gene67769.t1 | AT3G53000 | 24.454 | 229 | 146 | 6 | 1 | 217 | 17 | 230 | 4.92e-15 | 74.7 |
| MS.gene67769.t1 | AT3G61060 | 27.742 | 155 | 95 | 5 | 7 | 159 | 27 | 166 | 8.56e-14 | 70.9 |
| MS.gene67769.t1 | AT3G61060 | 25.806 | 155 | 99 | 4 | 7 | 159 | 27 | 167 | 6.37e-13 | 68.2 |
| MS.gene67769.t1 | AT1G63090 | 24.664 | 223 | 138 | 6 | 1 | 209 | 22 | 228 | 1.27e-12 | 67.4 |
| MS.gene67769.t1 | AT1G12710 | 23.661 | 224 | 139 | 7 | 1 | 209 | 24 | 230 | 6.63e-12 | 65.5 |
| MS.gene67769.t1 | AT5G52120 | 24.017 | 229 | 141 | 7 | 4 | 213 | 20 | 234 | 1.77e-11 | 63.9 |
Find 80 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTCAGAGCTTTAAAT+TGG | 0.211874 | 3.3:+2951129 | MS.gene67769:intron |
| CTGCTGATTCCGACGCTGTT+TGG | 0.274846 | 3.3:+2950841 | MS.gene67769:CDS |
| AGCCGCATACCGAGTATTTC+GGG | 0.278643 | 3.3:-2953130 | None:intergenic |
| TAGGCCTAAGGTGGAAAATT+AGG | 0.297645 | 3.3:+2953530 | MS.gene67769:CDS |
| AATGAGTGTTGTCGAGAAAT+TGG | 0.309455 | 3.3:+2953461 | MS.gene67769:CDS |
| TGCCAACGCTCCCACCAAAA+AGG | 0.326568 | 3.3:+2950926 | MS.gene67769:CDS |
| TTGGAACCACTTTCTCCCTT+TGG | 0.330062 | 3.3:+2950860 | MS.gene67769:CDS |
| AGGCCATACCCGAGTGTAAT+AGG | 0.331870 | 3.3:+2953351 | MS.gene67769:CDS |
| CACCCATCGCTTCTCATACT+AGG | 0.340594 | 3.3:-2953384 | None:intergenic |
| ATTTCTCGACAACACTCATT+TGG | 0.340801 | 3.3:-2953458 | None:intergenic |
| AAGCCGCATACCGAGTATTT+CGG | 0.344265 | 3.3:-2953131 | None:intergenic |
| GCAAACAATACGACGTTTGT+AGG | 0.352344 | 3.3:-2953307 | None:intergenic |
| TCTTTGTTGCGTGACGCGTT+TGG | 0.353770 | 3.3:-2953261 | None:intergenic |
| CGACCATGATCGATGATGAT+TGG | 0.368659 | 3.3:-2950975 | None:intergenic |
| ATGCAAAGCTTAGCGACTTC+AGG | 0.370688 | 3.3:-2953060 | None:intergenic |
| AAGGGAAATTTCTTTCTTGA+AGG | 0.378106 | 3.3:+2953498 | MS.gene67769:CDS |
| AGGAGTCGTACGAGACAAAA+TGG | 0.390730 | 3.3:-2950772 | None:intergenic |
| TTCAAGATGATTGATGACTA+TGG | 0.395723 | 3.3:+2953162 | MS.gene67769:CDS |
| TAGCACTAAATCCGTCTGTT+TGG | 0.402920 | 3.3:+2953236 | MS.gene67769:CDS |
| TTCTTGAAGGAATAGAAGTT+AGG | 0.408541 | 3.3:+2953511 | MS.gene67769:CDS |
| GTGTTCTCGCTTAAAATTCG+TGG | 0.423796 | 3.3:+2953084 | MS.gene67769:CDS |
| GACCATGATCGATGATGATT+GGG | 0.433866 | 3.3:-2950974 | None:intergenic |
| ATGGCTGAGATGCATCCTTC+CGG | 0.434947 | 3.3:-2950753 | None:intergenic |
| GAGAGTCTGCAAACATCAAC+AGG | 0.436594 | 3.3:-2950792 | None:intergenic |
| GGATTCATATGAATGATTCC+AGG | 0.439610 | 3.3:+2951269 | MS.gene67769:CDS |
| CACCTTCTACATCAATTGAT+AGG | 0.448672 | 3.3:-2953206 | None:intergenic |
| GCAAATGTCCCGGTCCTAGA+TGG | 0.460524 | 3.3:+2953328 | MS.gene67769:CDS |
| CTCGGGTATGGCCTCCATCT+AGG | 0.471641 | 3.3:-2953342 | None:intergenic |
| TATCAGAGAGAGCGAGATAG+AGG | 0.472204 | 3.3:-2950950 | None:intergenic |
| CGCCCTAGTATGAGAAGCGA+TGG | 0.476146 | 3.3:+2953381 | MS.gene67769:CDS |
| ATTGGAGAGTGGCAATAAGA+AGG | 0.476949 | 3.3:+2953479 | MS.gene67769:CDS |
| GACCTATCAATTGATGTAGA+AGG | 0.477578 | 3.3:+2953204 | MS.gene67769:CDS |
| CGCTGCAATCCTATTACACT+CGG | 0.477809 | 3.3:-2953360 | None:intergenic |
| TTGGAGAGTGGCAATAAGAA+GGG | 0.493842 | 3.3:+2953480 | MS.gene67769:CDS |
| GATGATAGAGTTAATGAGAC+GGG | 0.495408 | 3.3:-2950886 | None:intergenic |
| CTCACCATTCATTGCGGTGA+TGG | 0.500991 | 3.3:+2951196 | MS.gene67769:CDS |
| GCCACCATCACCGCAATGAA+TGG | 0.504191 | 3.3:-2951200 | None:intergenic |
| ACCCATCGCTTCTCATACTA+GGG | 0.511060 | 3.3:-2953383 | None:intergenic |
| ATTATGACATTGATAAAGAG+TGG | 0.514642 | 3.3:+2951248 | MS.gene67769:CDS |
| GTATGGCCTCCATCTAGGAC+CGG | 0.515958 | 3.3:-2953337 | None:intergenic |
| ACATCAATTGATAGGTCCAT+AGG | 0.521400 | 3.3:-2953198 | None:intergenic |
| AGCCCAATCATCATCGATCA+TGG | 0.522783 | 3.3:+2950972 | MS.gene67769:CDS |
| GTGGGAGCGTTGGCAAGGGA+AGG | 0.528441 | 3.3:-2950918 | None:intergenic |
| TGGGTGGTTGGAGATTGAGA+TGG | 0.532103 | 3.3:+2953401 | MS.gene67769:CDS |
| GAGTTCAATTCAAGACTTGA+AGG | 0.533035 | 3.3:+2953426 | MS.gene67769:CDS |
| TGGATTTGAGAATGAACCTA+TGG | 0.540096 | 3.3:+2953182 | MS.gene67769:CDS |
| GGGTGGTTGGAGATTGAGAT+GGG | 0.540728 | 3.3:+2953402 | MS.gene67769:CDS |
| TATGAGAAGCGATGGGTGGT+TGG | 0.542058 | 3.3:+2953389 | MS.gene67769:CDS |
| AATCCTATTACACTCGGGTA+TGG | 0.542614 | 3.3:-2953354 | None:intergenic |
| ACCATTCATTGCGGTGATGG+TGG | 0.550353 | 3.3:+2951199 | MS.gene67769:CDS |
| TTCAGAGCTTTAAATTGGAT+AGG | 0.554237 | 3.3:+2951134 | MS.gene67769:intron |
| CGTCGGAATCAGCAGCAGAA+AGG | 0.559078 | 3.3:-2950833 | None:intergenic |
| GGGAATCCAAAGGGAGAAAG+TGG | 0.566909 | 3.3:-2950866 | None:intergenic |
| TTTAAATTGGATAGGAAAAG+CGG | 0.567617 | 3.3:+2951142 | MS.gene67769:CDS |
| CGTATTGTTTGCAAATGTCC+CGG | 0.573164 | 3.3:+2953318 | MS.gene67769:CDS |
| GTTCCTTGTCCCGAAATACT+CGG | 0.579950 | 3.3:+2953121 | MS.gene67769:CDS |
| AAGGAAAGTCTTAGAAACAA+GGG | 0.585673 | 3.3:-2950814 | None:intergenic |
| AGGAATAGAAGTTAGGCCTA+AGG | 0.587169 | 3.3:+2953518 | MS.gene67769:CDS |
| AAAGGAAAGTCTTAGAAACA+AGG | 0.587344 | 3.3:-2950815 | None:intergenic |
| AATAGAAGTTAGGCCTAAGG+TGG | 0.588231 | 3.3:+2953521 | MS.gene67769:CDS |
| TAATGAGACGGGAATCCAAA+GGG | 0.591503 | 3.3:-2950875 | None:intergenic |
| TTTGGTGGGAGCGTTGGCAA+GGG | 0.595797 | 3.3:-2950922 | None:intergenic |
| CATCATCGATCATGGTCGAA+AGG | 0.598086 | 3.3:+2950980 | MS.gene67769:CDS |
| ACAAAGAAAGAACGTGCTCG+AGG | 0.605725 | 3.3:+2953277 | MS.gene67769:CDS |
| AGATGATAGAGTTAATGAGA+CGG | 0.608457 | 3.3:-2950887 | None:intergenic |
| CGCGTTTGGATCCAAACAGA+CGG | 0.612046 | 3.3:-2953247 | None:intergenic |
| ATCAGAGAGAGCGAGATAGA+GGG | 0.619326 | 3.3:-2950949 | None:intergenic |
| TATGGCCTCCATCTAGGACC+GGG | 0.622013 | 3.3:-2953336 | None:intergenic |
| GTCCCGAAATACTCGGTATG+CGG | 0.633122 | 3.3:+2953128 | MS.gene67769:CDS |
| AATGTCCCGGTCCTAGATGG+AGG | 0.653167 | 3.3:+2953331 | MS.gene67769:CDS |
| CTATCAATTGATGTAGAAGG+TGG | 0.658616 | 3.3:+2953207 | MS.gene67769:CDS |
| AAAGTGGTTCCAAACAGCGT+CGG | 0.661385 | 3.3:-2950850 | None:intergenic |
| TTAATGAGACGGGAATCCAA+AGG | 0.670447 | 3.3:-2950876 | None:intergenic |
| GCCCTAGTATGAGAAGCGAT+GGG | 0.672039 | 3.3:+2953382 | MS.gene67769:CDS |
| ATACCGAGTATTTCGGGACA+AGG | 0.673317 | 3.3:-2953124 | None:intergenic |
| GTTGTCGAGAAATTGGAGAG+TGG | 0.680092 | 3.3:+2953468 | MS.gene67769:CDS |
| CTAGTATGAGAAGCGATGGG+TGG | 0.686490 | 3.3:+2953385 | MS.gene67769:CDS |
| GCTGCAATCCTATTACACTC+GGG | 0.696916 | 3.3:-2953359 | None:intergenic |
| AGATCTCTCACCATTCATTG+CGG | 0.710070 | 3.3:+2951190 | MS.gene67769:CDS |
| AGTGATGATATTGATGATAG+CGG | 0.737501 | 3.3:+2951223 | MS.gene67769:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTACTTATAATTTTTT+TGG | - | chr3.3:2952751-2952770 | None:intergenic | 10.0% |
| !!! | TAATTTTTAATCAATTGTTA+AGG | + | chr3.3:2951059-2951078 | MS.gene67769:intron | 10.0% |
| !! | AAAAAAAAAAAAAACTAACC+TGG | - | chr3.3:2951290-2951309 | None:intergenic | 15.0% |
| !! | CAAATATTGATATATTTAGA+GGG | - | chr3.3:2951462-2951481 | None:intergenic | 15.0% |
| !! | TCAAATATTGATATATTTAG+AGG | - | chr3.3:2951463-2951482 | None:intergenic | 15.0% |
| !!! | AAAACCTAAAAGAATATTTT+AGG | - | chr3.3:2951496-2951515 | None:intergenic | 15.0% |
| !!! | AAAACCTAAGAAATATTTTA+GGG | + | chr3.3:2951609-2951628 | MS.gene67769:intron | 15.0% |
| !!! | AAAATATTCTTTTAGGTTTT+TGG | + | chr3.3:2951496-2951515 | MS.gene67769:intron | 15.0% |
| !!! | ATTTCATGGATAAATTTTTT+TGG | - | chr3.3:2951527-2951546 | None:intergenic | 15.0% |
| !!! | ATTTGTGAATCAATTTTTTA+TGG | + | chr3.3:2951690-2951709 | MS.gene67769:intron | 15.0% |
| !!! | TTTGTGAATCAATTTTTTAT+GGG | + | chr3.3:2951691-2951710 | MS.gene67769:intron | 15.0% |
| !! | AAAGAAAACAAATTCATAAC+TGG | - | chr3.3:2952285-2952304 | None:intergenic | 20.0% |
| !! | AACCTTTATGAATACTAAAT+TGG | + | chr3.3:2951418-2951437 | MS.gene67769:intron | 20.0% |
| !! | ACCTTTATGAATACTAAATT+GGG | + | chr3.3:2951419-2951438 | MS.gene67769:intron | 20.0% |
| !! | AGCTATCTATTAATGTTATA+TGG | + | chr3.3:2951935-2951954 | MS.gene67769:intron | 20.0% |
| !! | AGTAATATTCATTATTCTTG+CGG | - | chr3.3:2952147-2952166 | None:intergenic | 20.0% |
| !! | ATAAGCATGAAACAAATTAT+TGG | - | chr3.3:2952313-2952332 | None:intergenic | 20.0% |
| !! | ATAATAGTATCATTAACACA+AGG | - | chr3.3:2951313-2951332 | None:intergenic | 20.0% |
| !! | ATCAAATGTTGGTATATTTA+AGG | + | chr3.3:2951640-2951659 | MS.gene67769:intron | 20.0% |
| !! | ATTAGACTATCATAATTGTA+GGG | - | chr3.3:2952638-2952657 | None:intergenic | 20.0% |
| !! | ATTCATTTGTAAGTTAACTT+TGG | - | chr3.3:2952795-2952814 | None:intergenic | 20.0% |
| !! | CCTAATATTTAAGAAATTCA+CGG | - | chr3.3:2951021-2951040 | None:intergenic | 20.0% |
| !! | CGTGAATTTCTTAAATATTA+GGG | + | chr3.3:2951019-2951038 | MS.gene67769:intron | 20.0% |
| !! | GGTAAAACTTATATCAAAAT+AGG | - | chr3.3:2952353-2952372 | None:intergenic | 20.0% |
| !! | TAAGCATGAAACAAATTATT+GGG | - | chr3.3:2952312-2952331 | None:intergenic | 20.0% |
| !! | TCAAATGTTGGTATATTTAA+GGG | + | chr3.3:2951641-2951660 | MS.gene67769:intron | 20.0% |
| !! | TTCATTTGTAAGTTAACTTT+GGG | - | chr3.3:2952794-2952813 | None:intergenic | 20.0% |
| !!! | AAACCTAAGAAATATTTTAG+GGG | + | chr3.3:2951610-2951629 | MS.gene67769:intron | 20.0% |
| !!! | AAATTGATTCACAAATTAGT+AGG | - | chr3.3:2951686-2951705 | None:intergenic | 20.0% |
| !!! | AATTGATTCACAAATTAGTA+GGG | - | chr3.3:2951685-2951704 | None:intergenic | 20.0% |
| !!! | ACTTGTTACAAAATAAACAT+AGG | - | chr3.3:2952411-2952430 | None:intergenic | 20.0% |
| !!! | ATGTTTATTTTGTAACAAGT+TGG | + | chr3.3:2952411-2952430 | MS.gene67769:intron | 20.0% |
| !!! | CAAAACCTAAGAAATATTTT+AGG | + | chr3.3:2951608-2951627 | MS.gene67769:intron | 20.0% |
| !!! | TTGTTTTTGCAATTATTTAC+AGG | + | chr3.3:2953034-2953053 | MS.gene67769:intron | 20.0% |
| ! | ACCCAATTTAGTATTCATAA+AGG | - | chr3.3:2951423-2951442 | None:intergenic | 25.0% |
| ! | ATTATGACATTGATAAAGAG+TGG | + | chr3.3:2951248-2951267 | MS.gene67769:CDS | 25.0% |
| ! | CAAATGTTGGTATATTTAAG+GGG | + | chr3.3:2951642-2951661 | MS.gene67769:intron | 25.0% |
| ! | CATTAGACTATCATAATTGT+AGG | - | chr3.3:2952639-2952658 | None:intergenic | 25.0% |
| ! | CCGTGAATTTCTTAAATATT+AGG | + | chr3.3:2951018-2951037 | MS.gene67769:intron | 25.0% |
| ! | CTCTGAATTTCATATATTCA+AGG | - | chr3.3:2951121-2951140 | None:intergenic | 25.0% |
| ! | GAATATTTATTTGCATAGTG+TGG | + | chr3.3:2952658-2952677 | MS.gene67769:intron | 25.0% |
| ! | GTTATATGGACAATTATGTA+GGG | + | chr3.3:2951949-2951968 | MS.gene67769:intron | 25.0% |
| ! | TAAAAGAGAATTATCAGAGA+GGG | - | chr3.3:2952844-2952863 | None:intergenic | 25.0% |
| ! | TAGAATTCTATTAGAAGACT+CGG | - | chr3.3:2951900-2951919 | None:intergenic | 25.0% |
| ! | TATGTTAATGAAGCCATATT+GGG | - | chr3.3:2951352-2951371 | None:intergenic | 25.0% |
| ! | TATTCTTGAGCTATGTAATT+GGG | - | chr3.3:2952184-2952203 | None:intergenic | 25.0% |
| ! | TGTAGATACGATAATAATGT+AGG | - | chr3.3:2952949-2952968 | None:intergenic | 25.0% |
| ! | TGTTATATGGACAATTATGT+AGG | + | chr3.3:2951948-2951967 | MS.gene67769:intron | 25.0% |
| ! | TTAAAAGAGAATTATCAGAG+AGG | - | chr3.3:2952845-2952864 | None:intergenic | 25.0% |
| ! | TTAGACTATCATAATTGTAG+GGG | - | chr3.3:2952637-2952656 | None:intergenic | 25.0% |
| ! | TTATATGGACAATTATGTAG+GGG | + | chr3.3:2951950-2951969 | MS.gene67769:intron | 25.0% |
| ! | TTATGTTAATGAAGCCATAT+TGG | - | chr3.3:2951353-2951372 | None:intergenic | 25.0% |
| ! | TTATTCTTGAGCTATGTAAT+TGG | - | chr3.3:2952185-2952204 | None:intergenic | 25.0% |
| ! | TTTAAATTGGATAGGAAAAG+CGG | + | chr3.3:2951142-2951161 | MS.gene67769:CDS | 25.0% |
| !! | AATTGGGTTAGATATGTAAT+TGG | + | chr3.3:2951435-2951454 | MS.gene67769:intron | 25.0% |
| !! | CATAGATGAAATTTTCTGAA+GGG | + | chr3.3:2951583-2951602 | MS.gene67769:intron | 25.0% |
| !! | TCATAGATGAAATTTTCTGA+AGG | + | chr3.3:2951582-2951601 | MS.gene67769:intron | 25.0% |
| !! | TGCTCCTAAAATATTCTTTT+AGG | + | chr3.3:2951489-2951508 | MS.gene67769:intron | 25.0% |
| !! | TTTTTCACATATATGTCTGT+TGG | + | chr3.3:2951726-2951745 | MS.gene67769:intron | 25.0% |
| !!! | AACCTAAGAAATATTTTAGG+GGG | + | chr3.3:2951611-2951630 | MS.gene67769:intron | 25.0% |
| !!! | ATTTTGAGAGAAGCTATATA+TGG | - | chr3.3:2951805-2951824 | None:intergenic | 25.0% |
| !!! | GATTTTGAGACATTAATCTA+TGG | - | chr3.3:2951783-2951802 | None:intergenic | 25.0% |
| !!! | TCATGGATAAATTTTTTTGG+AGG | - | chr3.3:2951524-2951543 | None:intergenic | 25.0% |
| !!! | TGAAATTCAGAGCTTTAAAT+TGG | + | chr3.3:2951129-2951148 | MS.gene67769:intron | 25.0% |
| AAAAGAGAATTATCAGAGAG+GGG | - | chr3.3:2952843-2952862 | None:intergenic | 30.0% | |
| AAAGGAAAGTCTTAGAAACA+AGG | - | chr3.3:2950818-2950837 | None:intergenic | 30.0% | |
| AAGGAAAGTCTTAGAAACAA+GGG | - | chr3.3:2950817-2950836 | None:intergenic | 30.0% | |
| AAGGGAAATTTCTTTCTTGA+AGG | + | chr3.3:2953498-2953517 | MS.gene67769:CDS | 30.0% | |
| AGATGATAGAGTTAATGAGA+CGG | - | chr3.3:2950890-2950909 | None:intergenic | 30.0% | |
| ATGAATTGAAAGAGATGGAA+AGG | - | chr3.3:2952260-2952279 | None:intergenic | 30.0% | |
| GGAATTATAATCGAACTTGA+TGG | - | chr3.3:2952239-2952258 | None:intergenic | 30.0% | |
| GTATTATACTCCATATGTGA+TGG | + | chr3.3:2952972-2952991 | MS.gene67769:intron | 30.0% | |
| TATTCATTATTCTTGCGGTT+TGG | - | chr3.3:2952142-2952161 | None:intergenic | 30.0% | |
| TGAAGCTCAATATTAGTGAT+GGG | + | chr3.3:2952816-2952835 | MS.gene67769:intron | 30.0% | |
| TGGAAATGAATTGAAAGAGA+TGG | - | chr3.3:2952265-2952284 | None:intergenic | 30.0% | |
| TTCTTGAAGGAATAGAAGTT+AGG | + | chr3.3:2953511-2953530 | MS.gene67769:CDS | 30.0% | |
| ! | AGTGATGATATTGATGATAG+CGG | + | chr3.3:2951223-2951242 | MS.gene67769:CDS | 30.0% |
| ! | TTCAAGATGATTGATGACTA+TGG | + | chr3.3:2953162-2953181 | MS.gene67769:CDS | 30.0% |
| !! | ATATGGTTTGGTGATAACAT+GGG | + | chr3.3:2951836-2951855 | MS.gene67769:intron | 30.0% |
| !! | TTCAGAGCTTTAAATTGGAT+AGG | + | chr3.3:2951134-2951153 | MS.gene67769:intron | 30.0% |
| !!! | CATATTGGGTTTTAAGTGAT+GGG | - | chr3.3:2951338-2951357 | None:intergenic | 30.0% |
| ACATCAATTGATAGGTCCAT+AGG | - | chr3.3:2953201-2953220 | None:intergenic | 35.0% | |
| ATTTCTCGACAACACTCATT+TGG | - | chr3.3:2953461-2953480 | None:intergenic | 35.0% | |
| CAAAATGAGAAGGCTACATA+TGG | + | chr3.3:2951819-2951838 | MS.gene67769:intron | 35.0% | |
| CACCTTCTACATCAATTGAT+AGG | - | chr3.3:2953209-2953228 | None:intergenic | 35.0% | |
| CCATCACTTAAAACCCAATA+TGG | + | chr3.3:2951336-2951355 | MS.gene67769:intron | 35.0% | |
| CTATCAATTGATGTAGAAGG+TGG | + | chr3.3:2953207-2953226 | MS.gene67769:CDS | 35.0% | |
| CTGAAGCTCAATATTAGTGA+TGG | + | chr3.3:2952815-2952834 | MS.gene67769:intron | 35.0% | |
| GACCTATCAATTGATGTAGA+AGG | + | chr3.3:2953204-2953223 | MS.gene67769:CDS | 35.0% | |
| GAGTTCAATTCAAGACTTGA+AGG | + | chr3.3:2953426-2953445 | MS.gene67769:CDS | 35.0% | |
| GATGATAGAGTTAATGAGAC+GGG | - | chr3.3:2950889-2950908 | None:intergenic | 35.0% | |
| GGATTCATATGAATGATTCC+AGG | + | chr3.3:2951269-2951288 | MS.gene67769:CDS | 35.0% | |
| GTCCCCCTAAAATATTTCTT+AGG | - | chr3.3:2951616-2951635 | None:intergenic | 35.0% | |
| GTGATTCATACCATCACATA+TGG | - | chr3.3:2952985-2953004 | None:intergenic | 35.0% | |
| TAGCTTCTCTCAAAATGAGA+AGG | + | chr3.3:2951809-2951828 | MS.gene67769:intron | 35.0% | |
| TAGGCTCATCAACTAAAGTT+TGG | - | chr3.3:2952930-2952949 | None:intergenic | 35.0% | |
| TGGATTTGAGAATGAACCTA+TGG | + | chr3.3:2953182-2953201 | MS.gene67769:CDS | 35.0% | |
| ! | AATGAGTGTTGTCGAGAAAT+TGG | + | chr3.3:2953461-2953480 | MS.gene67769:CDS | 35.0% |
| ! | AGATAAAAAAGCATGCGGTT+TGG | - | chr3.3:2952561-2952580 | None:intergenic | 35.0% |
| ! | GAAAGTTAGAAGCATGACAA+TGG | - | chr3.3:2952726-2952745 | None:intergenic | 35.0% |
| !! | ATTATTCTTGCGGTTTGGTT+TGG | - | chr3.3:2952137-2952156 | None:intergenic | 35.0% |
| !! | CATATGGTTTGGTGATAACA+TGG | + | chr3.3:2951835-2951854 | MS.gene67769:intron | 35.0% |
| !! | TGGTTTGCGGTTTTTCTATT+GGG | - | chr3.3:2951994-2952013 | None:intergenic | 35.0% |
| !!! | CCATATTGGGTTTTAAGTGA+TGG | - | chr3.3:2951339-2951358 | None:intergenic | 35.0% |
| !!! | GTTTTGATTGGTTTGGTTTG+CGG | - | chr3.3:2952007-2952026 | None:intergenic | 35.0% |
| !!! | GTTTTTCTATTGGGTTGGTT+CGG | - | chr3.3:2951985-2952004 | None:intergenic | 35.0% |
| !!! | TTGGTTTGCGGTTTTTCTAT+TGG | - | chr3.3:2951995-2952014 | None:intergenic | 35.0% |
| AATAGAAGTTAGGCCTAAGG+TGG | + | chr3.3:2953521-2953540 | MS.gene67769:CDS | 40.0% | |
| AATCCTATTACACTCGGGTA+TGG | - | chr3.3:2953357-2953376 | None:intergenic | 40.0% | |
| AGATCTCTCACCATTCATTG+CGG | + | chr3.3:2951190-2951209 | MS.gene67769:CDS | 40.0% | |
| AGGAATAGAAGTTAGGCCTA+AGG | + | chr3.3:2953518-2953537 | MS.gene67769:CDS | 40.0% | |
| ATTGGAGAGTGGCAATAAGA+AGG | + | chr3.3:2953479-2953498 | MS.gene67769:CDS | 40.0% | |
| CAAACCAAACCAAACCAATG+CGG | - | chr3.3:2952503-2952522 | None:intergenic | 40.0% | |
| CACATATATGTCTGTTGGCA+AGG | + | chr3.3:2951731-2951750 | MS.gene67769:intron | 40.0% | |
| CATGCTCTACATTGAGAACA+GGG | - | chr3.3:2951554-2951573 | None:intergenic | 40.0% | |
| CGTATTGTTTGCAAATGTCC+CGG | + | chr3.3:2953318-2953337 | MS.gene67769:CDS | 40.0% | |
| GACCATGATCGATGATGATT+GGG | - | chr3.3:2950977-2950996 | None:intergenic | 40.0% | |
| GAGAACAGGGACTAATTTCA+TGG | - | chr3.3:2951541-2951560 | None:intergenic | 40.0% | |
| GCAAACAATACGACGTTTGT+AGG | - | chr3.3:2953310-2953329 | None:intergenic | 40.0% | |
| GGGGGACTAAAATCAAATGT+TGG | + | chr3.3:2951629-2951648 | MS.gene67769:intron | 40.0% | |
| GTGTTCTCGCTTAAAATTCG+TGG | + | chr3.3:2953084-2953103 | MS.gene67769:CDS | 40.0% | |
| TAATGAGACGGGAATCCAAA+GGG | - | chr3.3:2950878-2950897 | None:intergenic | 40.0% | |
| TAGCACTAAATCCGTCTGTT+TGG | + | chr3.3:2953236-2953255 | MS.gene67769:CDS | 40.0% | |
| TGAGAAGGCTACATATGGTT+TGG | + | chr3.3:2951824-2951843 | MS.gene67769:intron | 40.0% | |
| TTAATGAGACGGGAATCCAA+AGG | - | chr3.3:2950879-2950898 | None:intergenic | 40.0% | |
| TTCTATTAGAAGACTCGGCA+TGG | - | chr3.3:2951895-2951914 | None:intergenic | 40.0% | |
| TTGGAGAGTGGCAATAAGAA+GGG | + | chr3.3:2953480-2953499 | MS.gene67769:CDS | 40.0% | |
| ! | GCTTTTGATGAATTTCCGGA+AGG | + | chr3.3:2950738-2950757 | MS.gene67769:CDS | 40.0% |
| ! | GGCAGCTTTTGATGAATTTC+CGG | + | chr3.3:2950734-2950753 | MS.gene67769:CDS | 40.0% |
| ! | TTGCGGTTTTTCTATTGGGT+TGG | - | chr3.3:2951990-2952009 | None:intergenic | 40.0% |
| !! | AAAAAGCATGCGGTTTGGTT+TGG | - | chr3.3:2952556-2952575 | None:intergenic | 40.0% |
| !! | AGGTACTCATATTTTGGGAG+GGG | + | chr3.3:2951862-2951881 | MS.gene67769:intron | 40.0% |
| !! | GAGGTACTCATATTTTGGGA+GGG | + | chr3.3:2951861-2951880 | MS.gene67769:intron | 40.0% |
| !! | TGGTTTGGTTTGGTTTGGTT+TGG | + | chr3.3:2952506-2952525 | MS.gene67769:intron | 40.0% |
| !! | TTTGCGGTTTCGGTTTTGAT+TGG | - | chr3.3:2952019-2952038 | None:intergenic | 40.0% |
| !!! | AGAGGTACTCATATTTTGGG+AGG | + | chr3.3:2951860-2951879 | MS.gene67769:intron | 40.0% |
| !!! | GGCAGAGGTACTCATATTTT+GGG | + | chr3.3:2951857-2951876 | MS.gene67769:intron | 40.0% |
| !!! | GGTTTCGGTTTTGATTGGTT+TGG | - | chr3.3:2952014-2952033 | None:intergenic | 40.0% |
| !!! | TGCTTTTTTATCTCGCGGTT+TGG | + | chr3.3:2952568-2952587 | MS.gene67769:intron | 40.0% |
| AAACCGCAAAAAACCGCACT+TGG | + | chr3.3:2952029-2952048 | MS.gene67769:intron | 45.0% | |
| AAAGTGGTTCCAAACAGCGT+CGG | - | chr3.3:2950853-2950872 | None:intergenic | 45.0% | |
| AAGCCGCATACCGAGTATTT+CGG | - | chr3.3:2953134-2953153 | None:intergenic | 45.0% | |
| ACAAAGAAAGAACGTGCTCG+AGG | + | chr3.3:2953277-2953296 | MS.gene67769:CDS | 45.0% | |
| ACCCATCGCTTCTCATACTA+GGG | - | chr3.3:2953386-2953405 | None:intergenic | 45.0% | |
| AGCCCAATCATCATCGATCA+TGG | + | chr3.3:2950972-2950991 | MS.gene67769:CDS | 45.0% | |
| AGGAGTCGTACGAGACAAAA+TGG | - | chr3.3:2950775-2950794 | None:intergenic | 45.0% | |
| ATACCGAGTATTTCGGGACA+AGG | - | chr3.3:2953127-2953146 | None:intergenic | 45.0% | |
| ATCAGAGAGAGCGAGATAGA+GGG | - | chr3.3:2950952-2950971 | None:intergenic | 45.0% | |
| ATGCAAAGCTTAGCGACTTC+AGG | - | chr3.3:2953063-2953082 | None:intergenic | 45.0% | |
| CAAACCAAACCAATGCGGTT+TGG | - | chr3.3:2952498-2952517 | None:intergenic | 45.0% | |
| CATCATCGATCATGGTCGAA+AGG | + | chr3.3:2950980-2950999 | MS.gene67769:CDS | 45.0% | |
| CCATGCTCTACATTGAGAAC+AGG | - | chr3.3:2951555-2951574 | None:intergenic | 45.0% | |
| CCTGTTCTCAATGTAGAGCA+TGG | + | chr3.3:2951552-2951571 | MS.gene67769:intron | 45.0% | |
| CGACCATGATCGATGATGAT+TGG | - | chr3.3:2950978-2950997 | None:intergenic | 45.0% | |
| CGCTGCAATCCTATTACACT+CGG | - | chr3.3:2953363-2953382 | None:intergenic | 45.0% | |
| GAATTCATCCGAACCAAGTG+CGG | - | chr3.3:2952045-2952064 | None:intergenic | 45.0% | |
| GAGAGTCTGCAAACATCAAC+AGG | - | chr3.3:2950795-2950814 | None:intergenic | 45.0% | |
| GCAAAAAACCGCACTTGGTT+CGG | + | chr3.3:2952034-2952053 | MS.gene67769:intron | 45.0% | |
| GCTGCAATCCTATTACACTC+GGG | - | chr3.3:2953362-2953381 | None:intergenic | 45.0% | |
| GTTCCTTGTCCCGAAATACT+CGG | + | chr3.3:2953121-2953140 | MS.gene67769:CDS | 45.0% | |
| GTTGTCGAGAAATTGGAGAG+TGG | + | chr3.3:2953468-2953487 | MS.gene67769:CDS | 45.0% | |
| TATCAGAGAGAGCGAGATAG+AGG | - | chr3.3:2950953-2950972 | None:intergenic | 45.0% | |
| TTGGAACCACTTTCTCCCTT+TGG | + | chr3.3:2950860-2950879 | MS.gene67769:CDS | 45.0% | |
| ! | CAAACCAATGCGGTTTGGAT+TGG | - | chr3.3:2952493-2952512 | None:intergenic | 45.0% |
| ! | CCGCGAGATAAAAAAGCATG+CGG | - | chr3.3:2952566-2952585 | None:intergenic | 45.0% |
| ! | TTTGGTGATAACATGGGCAG+AGG | + | chr3.3:2951842-2951861 | MS.gene67769:intron | 45.0% |
| !! | AGATAGAGGGCCTTTTTGGT+GGG | - | chr3.3:2950939-2950958 | None:intergenic | 45.0% |
| !! | CAAACCGCATTGGTTTGGTT+TGG | + | chr3.3:2952496-2952515 | MS.gene67769:intron | 45.0% |
| !! | CAATCCAAACCGCATTGGTT+TGG | + | chr3.3:2952491-2952510 | MS.gene67769:intron | 45.0% |
| !! | CAATGCGGTTTGGATTGGTT+CGG | - | chr3.3:2952488-2952507 | None:intergenic | 45.0% |
| !! | CATAATTGTAGGGGTGTTCG+CGG | - | chr3.3:2952628-2952647 | None:intergenic | 45.0% |
| !! | CGCATTGGTTTGGTTTGGTT+TGG | + | chr3.3:2952501-2952520 | MS.gene67769:intron | 45.0% |
| !! | CGGTTTGGTTTGGTTTGGTT+CGG | - | chr3.3:2952127-2952146 | None:intergenic | 45.0% |
| !! | GCACTTGGTTCGGATGAATT+CGG | + | chr3.3:2952044-2952063 | MS.gene67769:intron | 45.0% |
| !! | TCTTGCGGTTTGGTTTGGTT+TGG | - | chr3.3:2952132-2952151 | None:intergenic | 45.0% |
| !! | TTGGATTGGTTCGGTTTGAG+CGG | - | chr3.3:2952479-2952498 | None:intergenic | 45.0% |
| !!! | AGTGCGGTTTTTTGCGGTTT+CGG | - | chr3.3:2952029-2952048 | None:intergenic | 45.0% |
| !!! | CCGCATGCTTTTTTATCTCG+CGG | + | chr3.3:2952563-2952582 | MS.gene67769:intron | 45.0% |
| !!! | GAACCAAGTGCGGTTTTTTG+CGG | - | chr3.3:2952035-2952054 | None:intergenic | 45.0% |
| !!! | GGGCAGAGGTACTCATATTT+TGG | + | chr3.3:2951856-2951875 | MS.gene67769:intron | 45.0% |
| !! | TGTTTATATAATAAAATATT+AGG | - | chr3.3:2952374-2952393 | None:intergenic | 5.0% |
| AGCCGCATACCGAGTATTTC+GGG | - | chr3.3:2953133-2953152 | None:intergenic | 50.0% | |
| AGGCCATACCCGAGTGTAAT+AGG | + | chr3.3:2953351-2953370 | MS.gene67769:CDS | 50.0% | |
| ATGGCTGAGATGCATCCTTC+CGG | - | chr3.3:2950756-2950775 | None:intergenic | 50.0% | |
| CACCCATCGCTTCTCATACT+AGG | - | chr3.3:2953387-2953406 | None:intergenic | 50.0% | |
| CGAACCAATCCAAACCGCAT+TGG | + | chr3.3:2952486-2952505 | MS.gene67769:intron | 50.0% | |
| CGCGTTTGGATCCAAACAGA+CGG | - | chr3.3:2953250-2953269 | None:intergenic | 50.0% | |
| CTAGTATGAGAAGCGATGGG+TGG | + | chr3.3:2953385-2953404 | MS.gene67769:CDS | 50.0% | |
| CTCACCATTCATTGCGGTGA+TGG | + | chr3.3:2951196-2951215 | MS.gene67769:CDS | 50.0% | |
| GCCCTAGTATGAGAAGCGAT+GGG | + | chr3.3:2953382-2953401 | MS.gene67769:CDS | 50.0% | |
| GGGAATCCAAAGGGAGAAAG+TGG | - | chr3.3:2950869-2950888 | None:intergenic | 50.0% | |
| GGGTGGTTGGAGATTGAGAT+GGG | + | chr3.3:2953402-2953421 | MS.gene67769:CDS | 50.0% | |
| GTCCCGAAATACTCGGTATG+CGG | + | chr3.3:2953128-2953147 | MS.gene67769:CDS | 50.0% | |
| TATGAGAAGCGATGGGTGGT+TGG | + | chr3.3:2953389-2953408 | MS.gene67769:CDS | 50.0% | |
| TCTTTGTTGCGTGACGCGTT+TGG | - | chr3.3:2953264-2953283 | None:intergenic | 50.0% | |
| TGGGTGGTTGGAGATTGAGA+TGG | + | chr3.3:2953401-2953420 | MS.gene67769:CDS | 50.0% | |
| TTAGAAGACTCGGCATGGAC+AGG | - | chr3.3:2951890-2951909 | None:intergenic | 50.0% | |
| ! | ACCATTCATTGCGGTGATGG+TGG | + | chr3.3:2951199-2951218 | MS.gene67769:CDS | 50.0% |
| ! | AGCGAGATAGAGGGCCTTTT+TGG | - | chr3.3:2950943-2950962 | None:intergenic | 50.0% |
| ! | GACTTTTGCACTGAACCGCA+CGG | + | chr3.3:2952069-2952088 | MS.gene67769:intron | 50.0% |
| ! | GAGATAGAGGGCCTTTTTGG+TGG | - | chr3.3:2950940-2950959 | None:intergenic | 50.0% |
| !! | CGAACTTGATGGTGCAACGA+TGG | - | chr3.3:2952228-2952247 | None:intergenic | 50.0% |
| !! | GCATGCGGTTTGGTTTGGTT+CGG | - | chr3.3:2952551-2952570 | None:intergenic | 50.0% |
| AATGTCCCGGTCCTAGATGG+AGG | + | chr3.3:2953331-2953350 | MS.gene67769:CDS | 55.0% | |
| CGCCCTAGTATGAGAAGCGA+TGG | + | chr3.3:2953381-2953400 | MS.gene67769:CDS | 55.0% | |
| CGTCGGAATCAGCAGCAGAA+AGG | - | chr3.3:2950836-2950855 | None:intergenic | 55.0% | |
| GCAAATGTCCCGGTCCTAGA+TGG | + | chr3.3:2953328-2953347 | MS.gene67769:CDS | 55.0% | |
| GCCACCATCACCGCAATGAA+TGG | - | chr3.3:2951203-2951222 | None:intergenic | 55.0% | |
| TGCCAACGCTCCCACCAAAA+AGG | + | chr3.3:2950926-2950945 | MS.gene67769:CDS | 55.0% | |
| TTGCACTGAACCGCACGGTT+CGG | + | chr3.3:2952074-2952093 | MS.gene67769:intron | 55.0% | |
| ! | GTATGGCCTCCATCTAGGAC+CGG | - | chr3.3:2953340-2953359 | None:intergenic | 55.0% |
| ! | TATGGCCTCCATCTAGGACC+GGG | - | chr3.3:2953339-2953358 | None:intergenic | 55.0% |
| !! | CTGCTGATTCCGACGCTGTT+TGG | + | chr3.3:2950841-2950860 | MS.gene67769:CDS | 55.0% |
| !! | TTTGGTGGGAGCGTTGGCAA+GGG | - | chr3.3:2950925-2950944 | None:intergenic | 55.0% |
| !!! | TTTTGGTGGGAGCGTTGGCA+AGG | - | chr3.3:2950926-2950945 | None:intergenic | 55.0% |
| CTCGGGTATGGCCTCCATCT+AGG | - | chr3.3:2953345-2953364 | None:intergenic | 60.0% | |
| GCAAACCGAACCGAACCGTG+CGG | - | chr3.3:2952087-2952106 | None:intergenic | 60.0% | |
| !! | CTGAACCGCACGGTTCGGTT+CGG | + | chr3.3:2952079-2952098 | MS.gene67769:intron | 60.0% |
| !! | GCACGGTTCGGTTCGGTTTG+CGG | + | chr3.3:2952086-2952105 | MS.gene67769:intron | 60.0% |
| !! | GGCCTTTTTGGTGGGAGCGT+TGG | - | chr3.3:2950931-2950950 | None:intergenic | 60.0% |
| !! | GTTCGCGGTGCGGTTTGGTT+CGG | - | chr3.3:2952613-2952632 | None:intergenic | 60.0% |
| !! | TTGTAGGGGTGTTCGCGGTG+CGG | - | chr3.3:2952623-2952642 | None:intergenic | 60.0% |
| !! | GTGGGAGCGTTGGCAAGGGA+AGG | - | chr3.3:2950921-2950940 | None:intergenic | 65.0% |
| ! | GGGGTGTTCGCGGTGCGGTT+TGG | - | chr3.3:2952618-2952637 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 2950729 | 2953551 | 2950729 | ID=MS.gene67769 |
| chr3.3 | mRNA | 2950729 | 2953551 | 2950729 | ID=MS.gene67769.t1;Parent=MS.gene67769 |
| chr3.3 | exon | 2950729 | 2951001 | 2950729 | ID=MS.gene67769.t1.exon1;Parent=MS.gene67769.t1 |
| chr3.3 | CDS | 2950729 | 2951001 | 2950729 | ID=cds.MS.gene67769.t1;Parent=MS.gene67769.t1 |
| chr3.3 | exon | 2951139 | 2951290 | 2951139 | ID=MS.gene67769.t1.exon2;Parent=MS.gene67769.t1 |
| chr3.3 | CDS | 2951139 | 2951290 | 2951139 | ID=cds.MS.gene67769.t1;Parent=MS.gene67769.t1 |
| chr3.3 | exon | 2953056 | 2953551 | 2953056 | ID=MS.gene67769.t1.exon3;Parent=MS.gene67769.t1 |
| chr3.3 | CDS | 2953056 | 2953551 | 2953056 | ID=cds.MS.gene67769.t1;Parent=MS.gene67769.t1 |
| Gene Sequence |
| Protein sequence |
