Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74860.t1 | XP_003590872.2 | 95.5 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 1.90E-143 | 519.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74860.t1 | Q9ZVQ6 | 44.6 | 267 | 130 | 7 | 4 | 264 | 14 | 268 | 2.5e-56 | 221.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74860.t1 | G7I5K2 | 95.5 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 1.3e-143 | 519.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74860.t1 | MTR_1g079180 | 95.472 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 0.0 | 525 |
MS.gene74860.t1 | MTR_1g079180 | 51.807 | 166 | 50 | 4 | 283 | 448 | 130 | 265 | 8.93e-43 | 152 |
MS.gene74860.t1 | MTR_1g079200 | 82.593 | 270 | 36 | 5 | 1 | 265 | 1 | 264 | 4.66e-151 | 430 |
MS.gene74860.t1 | MTR_1g079200 | 50.000 | 168 | 53 | 2 | 283 | 448 | 126 | 264 | 1.74e-40 | 145 |
MS.gene74860.t1 | MTR_1g079370 | 76.493 | 268 | 57 | 3 | 1 | 265 | 1 | 265 | 6.55e-146 | 417 |
MS.gene74860.t1 | MTR_1g079370 | 52.381 | 168 | 49 | 2 | 283 | 448 | 127 | 265 | 1.02e-45 | 160 |
MS.gene74860.t1 | MTR_1g079460 | 75.093 | 269 | 62 | 3 | 1 | 266 | 1 | 267 | 4.80e-138 | 397 |
MS.gene74860.t1 | MTR_1g079460 | 52.071 | 169 | 52 | 1 | 283 | 451 | 130 | 269 | 1.21e-46 | 162 |
MS.gene74860.t1 | MTR_1g100597 | 73.913 | 276 | 57 | 6 | 1 | 265 | 1 | 272 | 1.53e-135 | 391 |
MS.gene74860.t1 | MTR_1g100597 | 57.988 | 169 | 51 | 4 | 283 | 451 | 127 | 275 | 1.82e-50 | 172 |
MS.gene74860.t1 | MTR_1g079380 | 75.746 | 268 | 59 | 3 | 1 | 265 | 1 | 265 | 5.46e-133 | 385 |
MS.gene74860.t1 | MTR_1g079380 | 52.381 | 168 | 49 | 2 | 283 | 448 | 127 | 265 | 2.94e-46 | 162 |
MS.gene74860.t1 | MTR_1g079260 | 69.928 | 276 | 70 | 5 | 1 | 266 | 1 | 273 | 2.29e-129 | 375 |
MS.gene74860.t1 | MTR_1g079260 | 51.190 | 168 | 60 | 2 | 283 | 449 | 127 | 273 | 1.13e-45 | 160 |
MS.gene74860.t1 | MTR_1g079850 | 67.376 | 282 | 76 | 4 | 1 | 266 | 1 | 282 | 1.79e-122 | 358 |
MS.gene74860.t1 | MTR_1g079850 | 48.824 | 170 | 70 | 2 | 283 | 451 | 131 | 284 | 1.37e-38 | 141 |
MS.gene74860.t1 | MTR_1g079230 | 66.429 | 280 | 72 | 5 | 1 | 265 | 1 | 273 | 6.29e-120 | 351 |
MS.gene74860.t1 | MTR_1g079230 | 47.727 | 176 | 59 | 3 | 283 | 451 | 127 | 276 | 1.76e-39 | 143 |
MS.gene74860.t1 | MTR_1g079250 | 63.636 | 297 | 94 | 6 | 1 | 283 | 1 | 297 | 1.37e-114 | 338 |
MS.gene74860.t1 | MTR_1g079250 | 45.087 | 173 | 70 | 4 | 283 | 451 | 130 | 281 | 1.03e-31 | 123 |
MS.gene74860.t1 | MTR_1g100613 | 70.082 | 244 | 58 | 3 | 20 | 251 | 5 | 245 | 1.92e-114 | 336 |
MS.gene74860.t1 | MTR_1g100613 | 53.020 | 149 | 52 | 3 | 283 | 430 | 112 | 243 | 2.33e-38 | 139 |
MS.gene74860.t1 | MTR_1g026510 | 62.324 | 284 | 89 | 6 | 1 | 266 | 1 | 284 | 1.49e-111 | 331 |
MS.gene74860.t1 | MTR_1g026510 | 43.931 | 173 | 72 | 4 | 283 | 451 | 135 | 286 | 2.02e-31 | 122 |
MS.gene74860.t1 | MTR_3g006850 | 60.333 | 300 | 82 | 5 | 4 | 266 | 17 | 316 | 1.69e-106 | 318 |
MS.gene74860.t1 | MTR_3g006850 | 56.725 | 171 | 67 | 4 | 283 | 451 | 153 | 318 | 2.83e-53 | 181 |
MS.gene74860.t1 | MTR_3g452600 | 62.642 | 265 | 89 | 5 | 4 | 265 | 10 | 267 | 4.27e-101 | 303 |
MS.gene74860.t1 | MTR_3g452600 | 50.888 | 169 | 54 | 1 | 283 | 451 | 131 | 270 | 4.31e-44 | 155 |
MS.gene74860.t1 | MTR_1g079350 | 59.058 | 276 | 101 | 6 | 1 | 265 | 1 | 275 | 6.27e-95 | 287 |
MS.gene74860.t1 | MTR_1g079350 | 39.286 | 168 | 76 | 4 | 283 | 448 | 132 | 275 | 4.77e-25 | 104 |
MS.gene74860.t1 | MTR_1g078470 | 80.702 | 171 | 29 | 3 | 96 | 265 | 17 | 184 | 1.60e-93 | 280 |
MS.gene74860.t1 | MTR_1g078470 | 48.193 | 166 | 54 | 3 | 283 | 448 | 51 | 184 | 1.46e-39 | 140 |
MS.gene74860.t1 | MTR_3g450990 | 56.184 | 283 | 94 | 7 | 4 | 265 | 10 | 283 | 1.69e-90 | 276 |
MS.gene74860.t1 | MTR_3g450990 | 47.429 | 175 | 63 | 1 | 277 | 451 | 141 | 286 | 4.12e-42 | 150 |
MS.gene74860.t1 | MTR_2g079100 | 58.333 | 264 | 94 | 4 | 4 | 262 | 9 | 261 | 1.90e-89 | 273 |
MS.gene74860.t1 | MTR_2g079100 | 45.455 | 165 | 59 | 2 | 283 | 445 | 126 | 261 | 1.29e-33 | 127 |
MS.gene74860.t1 | MTR_1g079410 | 54.579 | 273 | 112 | 6 | 2 | 266 | 6 | 274 | 1.95e-87 | 268 |
MS.gene74860.t1 | MTR_1g079410 | 42.690 | 171 | 65 | 4 | 281 | 449 | 135 | 274 | 7.19e-30 | 117 |
MS.gene74860.t1 | MTR_1g079340 | 53.952 | 291 | 103 | 8 | 1 | 265 | 40 | 325 | 9.00e-85 | 263 |
MS.gene74860.t1 | MTR_1g079340 | 35.673 | 171 | 83 | 3 | 283 | 448 | 177 | 325 | 6.74e-20 | 90.5 |
MS.gene74860.t1 | MTR_7g096300 | 59.449 | 254 | 90 | 6 | 1 | 250 | 1 | 245 | 6.59e-81 | 265 |
MS.gene74860.t1 | MTR_7g096300 | 43.558 | 163 | 63 | 1 | 283 | 445 | 126 | 259 | 4.20e-28 | 118 |
MS.gene74860.t1 | MTR_1g079140 | 46.602 | 309 | 120 | 9 | 2 | 274 | 11 | 310 | 1.00e-76 | 242 |
MS.gene74860.t1 | MTR_1g079140 | 34.884 | 172 | 107 | 3 | 283 | 451 | 140 | 309 | 2.69e-23 | 100 |
MS.gene74860.t1 | MTR_1g079240 | 68.539 | 178 | 48 | 2 | 88 | 265 | 10 | 179 | 9.65e-76 | 234 |
MS.gene74860.t1 | MTR_1g079240 | 40.120 | 167 | 62 | 3 | 282 | 448 | 51 | 179 | 1.11e-25 | 103 |
MS.gene74860.t1 | MTR_1g079400 | 47.368 | 285 | 108 | 6 | 5 | 265 | 13 | 279 | 6.24e-69 | 221 |
MS.gene74860.t1 | MTR_1g079400 | 34.911 | 169 | 81 | 4 | 281 | 448 | 139 | 279 | 2.28e-17 | 82.4 |
MS.gene74860.t1 | MTR_7g112550 | 45.357 | 280 | 136 | 6 | 2 | 265 | 5 | 283 | 2.41e-66 | 214 |
MS.gene74860.t1 | MTR_7g112550 | 33.929 | 168 | 93 | 5 | 283 | 448 | 132 | 283 | 5.12e-16 | 78.6 |
MS.gene74860.t1 | MTR_1g083580 | 39.928 | 278 | 151 | 5 | 2 | 265 | 6 | 281 | 1.32e-56 | 189 |
MS.gene74860.t1 | MTR_1g083580 | 31.395 | 172 | 88 | 7 | 283 | 448 | 134 | 281 | 2.76e-11 | 64.3 |
MS.gene74860.t1 | MTR_1g079350 | 65.414 | 133 | 44 | 1 | 1 | 131 | 1 | 133 | 1.18e-47 | 163 |
MS.gene74860.t1 | MTR_7g112560 | 38.235 | 272 | 151 | 9 | 4 | 269 | 1 | 261 | 2.66e-47 | 164 |
MS.gene74860.t1 | MTR_7g112560 | 28.743 | 167 | 85 | 4 | 283 | 448 | 124 | 257 | 2.68e-12 | 67.4 |
MS.gene74860.t1 | MTR_1g076870 | 56.291 | 151 | 41 | 3 | 285 | 428 | 3 | 135 | 4.12e-46 | 156 |
MS.gene74860.t1 | MTR_1g076870 | 61.940 | 134 | 34 | 2 | 131 | 247 | 2 | 135 | 1.63e-45 | 155 |
MS.gene74860.t1 | MTR_4g023570 | 36.567 | 268 | 137 | 7 | 4 | 267 | 1 | 239 | 3.18e-42 | 150 |
MS.gene74860.t1 | MTR_2g042540 | 65.546 | 119 | 37 | 3 | 1 | 118 | 1 | 116 | 7.04e-39 | 137 |
MS.gene74860.t1 | MTR_1g079210 | 59.504 | 121 | 37 | 1 | 132 | 240 | 7 | 127 | 1.53e-38 | 136 |
MS.gene74860.t1 | MTR_1g079210 | 44.366 | 142 | 56 | 3 | 285 | 422 | 7 | 129 | 2.85e-25 | 100 |
MS.gene74860.t1 | MTR_7g096310 | 59.848 | 132 | 45 | 3 | 60 | 189 | 38 | 163 | 4.22e-38 | 136 |
MS.gene74860.t1 | MTR_1g079130 | 43.386 | 189 | 80 | 5 | 104 | 265 | 1 | 189 | 1.90e-37 | 135 |
MS.gene74860.t1 | MTR_1g079130 | 35.088 | 171 | 104 | 3 | 283 | 451 | 27 | 192 | 2.49e-21 | 91.7 |
MS.gene74860.t1 | MTR_1g078460 | 72.222 | 90 | 22 | 1 | 1 | 90 | 64 | 150 | 3.92e-33 | 122 |
MS.gene74860.t1 | MTR_3g058640 | 57.843 | 102 | 41 | 1 | 131 | 232 | 7 | 106 | 6.91e-31 | 115 |
MS.gene74860.t1 | MTR_3g058640 | 44.531 | 128 | 42 | 1 | 285 | 412 | 8 | 106 | 2.18e-24 | 97.4 |
MS.gene74860.t1 | MTR_1g079220 | 76.471 | 68 | 14 | 1 | 168 | 235 | 1 | 66 | 4.32e-27 | 103 |
MS.gene74860.t1 | MTR_1g079220 | 47.368 | 95 | 21 | 1 | 321 | 415 | 1 | 66 | 1.14e-17 | 77.8 |
MS.gene74860.t1 | MTR_7g103380 | 25.540 | 278 | 179 | 7 | 6 | 267 | 21 | 286 | 1.02e-26 | 109 |
MS.gene74860.t1 | MTR_0113s0040 | 27.305 | 282 | 166 | 5 | 2 | 267 | 20 | 278 | 4.35e-26 | 107 |
MS.gene74860.t1 | MTR_4g102770 | 27.574 | 272 | 177 | 6 | 6 | 270 | 21 | 279 | 2.91e-21 | 94.0 |
MS.gene74860.t1 | MTR_0002s0020 | 27.642 | 246 | 156 | 7 | 6 | 243 | 24 | 255 | 1.33e-20 | 92.0 |
MS.gene74860.t1 | MTR_1g101390 | 25.532 | 282 | 171 | 6 | 2 | 267 | 26 | 284 | 1.58e-20 | 92.0 |
MS.gene74860.t1 | MTR_4g083970 | 30.806 | 211 | 117 | 7 | 66 | 267 | 102 | 292 | 3.36e-20 | 90.9 |
MS.gene74860.t1 | MTR_5g010800 | 27.372 | 274 | 172 | 9 | 6 | 269 | 19 | 275 | 6.80e-20 | 89.7 |
MS.gene74860.t1 | MTR_1g079190 | 80.488 | 41 | 8 | 0 | 400 | 440 | 134 | 174 | 2.82e-15 | 74.3 |
MS.gene74860.t1 | MTR_1g079390 | 72.917 | 48 | 12 | 1 | 214 | 260 | 8 | 55 | 1.70e-14 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74860.t1 | AT2G02360 | 44.569 | 267 | 130 | 7 | 4 | 264 | 14 | 268 | 2.22e-68 | 219 |
MS.gene74860.t1 | AT2G02360 | 32.727 | 165 | 75 | 4 | 286 | 447 | 137 | 268 | 5.33e-17 | 81.3 |
MS.gene74860.t1 | AT1G80110 | 46.947 | 262 | 125 | 7 | 7 | 264 | 4 | 255 | 5.73e-68 | 218 |
MS.gene74860.t1 | AT2G02240 | 43.019 | 265 | 138 | 6 | 4 | 264 | 61 | 316 | 8.14e-63 | 206 |
MS.gene74860.t1 | AT2G02340 | 41.758 | 273 | 146 | 6 | 1 | 264 | 33 | 301 | 1.10e-62 | 205 |
MS.gene74860.t1 | AT2G02250 | 42.264 | 265 | 141 | 5 | 4 | 264 | 47 | 303 | 1.02e-60 | 201 |
MS.gene74860.t1 | AT2G02230 | 36.774 | 310 | 144 | 9 | 2 | 265 | 30 | 333 | 1.44e-56 | 191 |
MS.gene74860.t1 | AT2G02230 | 28.646 | 192 | 104 | 7 | 283 | 451 | 155 | 336 | 3.69e-13 | 70.9 |
MS.gene74860.t1 | AT1G09155 | 41.135 | 282 | 139 | 10 | 7 | 265 | 3 | 280 | 1.58e-51 | 176 |
MS.gene74860.t1 | AT1G09155 | 34.104 | 173 | 92 | 5 | 283 | 448 | 123 | 280 | 2.87e-16 | 79.3 |
MS.gene74860.t1 | AT1G56250 | 41.489 | 282 | 138 | 9 | 7 | 265 | 4 | 281 | 3.69e-50 | 172 |
MS.gene74860.t1 | AT1G56250 | 31.765 | 170 | 100 | 4 | 283 | 448 | 124 | 281 | 3.07e-16 | 79.3 |
MS.gene74860.t1 | AT1G56240 | 40.925 | 281 | 139 | 10 | 7 | 264 | 4 | 280 | 9.96e-50 | 171 |
MS.gene74860.t1 | AT1G56240 | 32.544 | 169 | 98 | 4 | 283 | 447 | 124 | 280 | 4.73e-17 | 81.6 |
MS.gene74860.t1 | AT2G02350 | 38.889 | 270 | 149 | 8 | 2 | 264 | 22 | 282 | 4.67e-49 | 169 |
MS.gene74860.t1 | AT2G02350 | 30.233 | 172 | 87 | 4 | 279 | 447 | 141 | 282 | 1.44e-13 | 71.6 |
MS.gene74860.t1 | AT2G02320 | 39.405 | 269 | 141 | 9 | 6 | 264 | 42 | 298 | 7.04e-49 | 169 |
MS.gene74860.t1 | AT2G02320 | 29.940 | 167 | 87 | 3 | 287 | 450 | 162 | 301 | 1.36e-13 | 71.6 |
MS.gene74860.t1 | AT2G02310 | 36.431 | 269 | 157 | 6 | 4 | 266 | 45 | 305 | 8.40e-47 | 164 |
MS.gene74860.t1 | AT2G02300 | 38.095 | 273 | 135 | 7 | 4 | 266 | 34 | 282 | 1.83e-45 | 160 |
MS.gene74860.t1 | AT5G24560 | 40.306 | 196 | 99 | 5 | 4 | 195 | 3 | 184 | 2.27e-36 | 132 |
MS.gene74860.t1 | AT3G53000 | 29.091 | 275 | 166 | 8 | 6 | 264 | 23 | 284 | 3.10e-29 | 116 |
MS.gene74860.t1 | AT2G02350 | 37.500 | 168 | 95 | 6 | 104 | 264 | 1 | 165 | 3.29e-23 | 96.7 |
MS.gene74860.t1 | AT2G02350 | 31.098 | 164 | 80 | 4 | 287 | 447 | 32 | 165 | 1.65e-14 | 72.0 |
MS.gene74860.t1 | AT3G61060 | 25.185 | 270 | 178 | 7 | 6 | 266 | 27 | 281 | 1.32e-20 | 92.0 |
MS.gene74860.t1 | AT3G61060 | 24.444 | 270 | 181 | 6 | 6 | 266 | 27 | 282 | 4.86e-20 | 90.5 |
MS.gene74860.t1 | AT5G52120 | 28.058 | 278 | 171 | 8 | 4 | 267 | 21 | 283 | 9.15e-20 | 89.7 |
MS.gene74860.t1 | AT1G63090 | 29.126 | 206 | 124 | 7 | 6 | 195 | 28 | 227 | 3.41e-17 | 82.0 |
MS.gene74860.t1 | AT1G12710 | 27.500 | 200 | 128 | 4 | 6 | 192 | 30 | 225 | 1.68e-16 | 80.1 |
MS.gene74860.t1 | AT1G33920 | 29.545 | 176 | 95 | 6 | 99 | 265 | 9 | 164 | 1.58e-15 | 74.7 |
MS.gene74860.t1 | AT4G19850 | 30.168 | 179 | 96 | 7 | 97 | 265 | 17 | 176 | 6.80e-15 | 73.2 |
MS.gene74860.t1 | AT4G19850 | 30.168 | 179 | 96 | 7 | 97 | 265 | 59 | 218 | 9.01e-15 | 73.6 |
MS.gene74860.t1 | AT4G19840 | 25.000 | 252 | 137 | 8 | 47 | 266 | 15 | 246 | 9.46e-14 | 71.2 |
MS.gene74860.t1 | AT1G12710 | 28.931 | 159 | 108 | 3 | 6 | 163 | 30 | 184 | 6.24e-11 | 63.9 |
Find 117 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGCCGCATACTGGGTATT+TGG | 0.221796 | 1.1:+58856482 | None:intergenic |
ATTGGGGAGTTTGTCAATTC+AGG | 0.287046 | 1.1:-58856263 | MS.gene74860:CDS |
TCAAGAAGCTCAGCAACTTC+AGG | 0.299490 | 1.1:+58856554 | None:intergenic |
ACATTGCAATCCTGCTATAT+TGG | 0.301403 | 1.1:+58855045 | None:intergenic |
CAGGCACGTACTCAAATCTT+TGG | 0.310929 | 1.1:+58855239 | None:intergenic |
TTTGAACTTCTTCATCTTCA+AGG | 0.311584 | 1.1:+58854963 | None:intergenic |
AAGCCGCATACTGGGTATTT+GGG | 0.311807 | 1.1:+58856483 | None:intergenic |
TCATCTGGACTTCATCTTCT+AGG | 0.322582 | 1.1:+58856240 | None:intergenic |
TGATCATTGTCGATGATGAT+AGG | 0.340168 | 1.1:+58858755 | None:intergenic |
CCGCCGATTCCGACGCCGTC+TGG | 0.340798 | 1.1:-58858889 | MS.gene74860:CDS |
GGTGGTTGGAGATCGAGATT+GGG | 0.349116 | 1.1:-58856280 | MS.gene74860:CDS |
CGGAGTTGTGCGAGAGAGTA+TGG | 0.353862 | 1.1:+58858958 | None:intergenic |
TAGATCTCTCTCCATTGCTT+GGG | 0.357129 | 1.1:-58858546 | MS.gene74860:CDS |
GACAGAGTTTGAGGAATTAT+CGG | 0.357846 | 1.1:-58858996 | MS.gene74860:CDS |
TTGTCTCCTTAACAGTCATC+TGG | 0.369915 | 1.1:+58856225 | None:intergenic |
TGCGGCCTATGTTCCACATT+TGG | 0.370602 | 1.1:+58855157 | None:intergenic |
TAAAAGAATGACAGAGTTTG+AGG | 0.376392 | 1.1:-58859005 | None:intergenic |
GGATTTCTATGCCTAATTCC+AGG | 0.380639 | 1.1:-58858499 | MS.gene74860:intron |
ACACAAGATAAGCCGCATAC+TGG | 0.382857 | 1.1:+58856474 | None:intergenic |
GGGTGGTTGGAGATTGAAAT+GGG | 0.384436 | 1.1:-58855004 | MS.gene74860:CDS |
ATACCTTCCACTTCAACATT+TGG | 0.391514 | 1.1:+58856353 | None:intergenic |
CTAGATCTCTCTCCATTGCT+TGG | 0.397153 | 1.1:-58858547 | MS.gene74860:CDS |
TTCTTGAAGGAATAGAAGTT+AGG | 0.408541 | 1.1:-58854895 | MS.gene74860:CDS |
TTCTTGAAGGAATAGAAGTT+AGG | 0.408541 | 1.1:-58856181 | MS.gene74860:CDS |
CAGCTCTAAATCTATCTGTT+TGG | 0.409942 | 1.1:-58855182 | MS.gene74860:CDS |
CAACAAAGCTTAGCAACTTC+AGG | 0.414720 | 1.1:+58855358 | None:intergenic |
ATCTAAGCTAACCTGGAATT+AGG | 0.417358 | 1.1:+58858488 | None:intergenic |
TGAAATGCAGAGCTTTCAAT+TGG | 0.419927 | 1.1:-58858606 | MS.gene74860:intron |
AGTACTACTGTGGCCACCTT+CGG | 0.420003 | 1.1:+58856394 | None:intergenic |
ATGATAGACGCTATTGGAAC+TGG | 0.420013 | 1.1:-58858520 | MS.gene74860:CDS |
AAGAGAGGTCTCTTTCTTGA+AGG | 0.431285 | 1.1:-58856194 | MS.gene74860:CDS |
CTGTTAAGGAGACAAATAAT+TGG | 0.433929 | 1.1:-58856217 | MS.gene74860:CDS |
TAGTACTAAAATTGTCTGTT+TGG | 0.439372 | 1.1:-58856378 | MS.gene74860:CDS |
GGGTGGTTGGAGATCGAGAT+TGG | 0.440537 | 1.1:-58856281 | MS.gene74860:CDS |
GCACCAACTGATAACTCTAT+AGG | 0.442404 | 1.1:+58856416 | None:intergenic |
CTTCTTGAAGTGTGGTGGCT+TGG | 0.449338 | 1.1:-58856539 | MS.gene74860:CDS |
ATTCCAGACGGCGTCGGAAT+CGG | 0.451722 | 1.1:+58858886 | None:intergenic |
TAGGACAGTTCTGAAATCCT+TGG | 0.473464 | 1.1:+58856435 | None:intergenic |
CTGAGCTTCTTGAAGTGTGG+TGG | 0.474820 | 1.1:-58856544 | MS.gene74860:CDS |
TGAAGTCCAGATGACTGTTA+AGG | 0.476166 | 1.1:-58856231 | MS.gene74860:CDS |
ATGGCCACCTTCAACATTAA+CGG | 0.477577 | 1.1:+58855207 | None:intergenic |
CAAGAAGCTCAGCAACTTCA+GGG | 0.478254 | 1.1:+58856555 | None:intergenic |
TGGGTGGTTGGAGATTGAAA+TGG | 0.480917 | 1.1:-58855005 | MS.gene74860:CDS |
AGGCACGTACTCAAATCTTT+GGG | 0.483152 | 1.1:+58855240 | None:intergenic |
CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1.1:-58856302 | MS.gene74860:CDS |
GAGAGTCTGCCGGCGTCAGC+CGG | 0.494209 | 1.1:+58858938 | None:intergenic |
GCACATTGGTTTGAAATATG+TGG | 0.497104 | 1.1:-58855334 | MS.gene74860:CDS |
GTGTGGTGGCTTGGTATTCG+TGG | 0.500560 | 1.1:-58856530 | MS.gene74860:CDS |
AGATAGATTTAGAGCTGCTA+TGG | 0.503083 | 1.1:+58855188 | None:intergenic |
ATGAGAGGAGCTCGTATGCC+AGG | 0.503430 | 1.1:-58855108 | MS.gene74860:CDS |
AGGACAGTTCTGAAATCCTT+GGG | 0.504063 | 1.1:+58856436 | None:intergenic |
AAAGTATATTGCAAAAGTCT+TGG | 0.510831 | 1.1:-58855085 | MS.gene74860:CDS |
GGCGGCAGAAAGGAATGTCT+TGG | 0.517109 | 1.1:+58858907 | None:intergenic |
GGGTATTTGGGGACAAGGCA+AGG | 0.520194 | 1.1:+58856495 | None:intergenic |
TGTCCTTGTGTGAGAAGTGA+TGG | 0.523185 | 1.1:-58855025 | MS.gene74860:CDS |
GACTTATCCGTTAATGTTGA+AGG | 0.524073 | 1.1:-58855214 | MS.gene74860:CDS |
GCAGTATACTGAGTATATAG+AGG | 0.524531 | 1.1:+58855289 | None:intergenic |
CACAAGATAAGCCGCATACT+GGG | 0.525109 | 1.1:+58856475 | None:intergenic |
TATTGCAAAAGTCTTGGTCC+TGG | 0.535119 | 1.1:-58855079 | MS.gene74860:CDS |
CTAAGCTTTGTTGTGCACAT+TGG | 0.535781 | 1.1:-58855348 | MS.gene74860:CDS |
CGTCGGAATCGGCGGCAGAA+AGG | 0.536416 | 1.1:+58858897 | None:intergenic |
TACTGAGTATATAGAGGCAA+TGG | 0.536840 | 1.1:+58855295 | None:intergenic |
GGGGTGATGATAGACGCTAT+TGG | 0.538074 | 1.1:-58858526 | MS.gene74860:CDS |
CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1.1:+58856299 | None:intergenic |
GCAAAAGTCTTGGTCCTGGA+TGG | 0.543644 | 1.1:-58855075 | MS.gene74860:CDS |
TGGAGCATGTCCAATATAGC+AGG | 0.546256 | 1.1:-58855055 | MS.gene74860:CDS |
ATGCATCATAACAGAGCAGT+AGG | 0.551413 | 1.1:-58856332 | MS.gene74860:CDS |
GTAGGAACGTTGGCAAGAGA+AGG | 0.551461 | 1.1:+58858812 | None:intergenic |
GAGTTATCAGTTGGTGCCGA+AGG | 0.554294 | 1.1:-58856410 | MS.gene74860:CDS |
TGTGAGAAGTGATGGGTGGT+TGG | 0.556044 | 1.1:-58855017 | MS.gene74860:CDS |
GATCATTGTCGATGATGATA+GGG | 0.558501 | 1.1:+58858756 | None:intergenic |
ATATTGGACATGCTCCATCC+AGG | 0.559952 | 1.1:+58855061 | None:intergenic |
TTGCTGAGCTTCTTGAAGTG+TGG | 0.560466 | 1.1:-58856547 | MS.gene74860:CDS |
CACATTGGTTTGAAATATGT+GGG | 0.563857 | 1.1:-58855333 | MS.gene74860:CDS |
TGGATCCAAATGTGGAACAT+AGG | 0.568265 | 1.1:-58855162 | MS.gene74860:CDS |
GAGACAAATAATTGGAAGAG+AGG | 0.569382 | 1.1:-58856209 | MS.gene74860:CDS |
GGAAACAACGGAGAGTCTGC+CGG | 0.570524 | 1.1:+58858928 | None:intergenic |
CATACGAGCTCCTCTCATGA+TGG | 0.572203 | 1.1:+58855113 | None:intergenic |
AGGAATAGAAGTTAGGCCTA+AGG | 0.576288 | 1.1:-58854888 | MS.gene74860:CDS |
TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1.1:-58856294 | MS.gene74860:CDS |
TCTATCATCACCCCAAGCAA+TGG | 0.578653 | 1.1:+58858535 | None:intergenic |
CCAGACGGCGTCGGAATCGG+CGG | 0.580387 | 1.1:+58858889 | None:intergenic |
GATCCAAATGTTGAAGTGGA+AGG | 0.581219 | 1.1:-58856356 | MS.gene74860:CDS |
AGATCTCTCTCCATTGCTTG+GGG | 0.585076 | 1.1:-58858545 | MS.gene74860:CDS |
TTTCAATTGGACAGAAAGAG+TGG | 0.585552 | 1.1:-58858593 | MS.gene74860:CDS |
CGCACAACTCCGGCTGACGC+CGG | 0.587266 | 1.1:-58858947 | MS.gene74860:CDS |
CATCATCGACAATGATCAGA+AGG | 0.590425 | 1.1:-58858750 | MS.gene74860:intron |
TTTGGATCCAAATGTTGAAG+TGG | 0.592404 | 1.1:-58856360 | MS.gene74860:CDS |
CATACTCTCTCGCACAACTC+CGG | 0.593196 | 1.1:-58858957 | MS.gene74860:CDS |
CACCCATCACTTCTCACACA+AGG | 0.598274 | 1.1:+58855022 | None:intergenic |
GTGGTTGGAGATCGAGATTG+GGG | 0.606434 | 1.1:-58856279 | MS.gene74860:CDS |
GAGTTTGAGGAATTATCGGA+AGG | 0.606592 | 1.1:-58858992 | MS.gene74860:CDS |
ACATTAACGGATAAGTCCAC+AGG | 0.607481 | 1.1:+58855220 | None:intergenic |
TTATCAGTTGGTGCCGAAGG+TGG | 0.607580 | 1.1:-58856407 | MS.gene74860:CDS |
AAGATTTGAGTACGTGCCTG+TGG | 0.611602 | 1.1:-58855236 | MS.gene74860:CDS |
AGCCGCATACTGGGTATTTG+GGG | 0.613317 | 1.1:+58856484 | None:intergenic |
TATCTGTTTGGATCCAAATG+TGG | 0.617024 | 1.1:-58855170 | MS.gene74860:CDS |
GTGGTTGGAGATTGAAATGG+GGG | 0.620504 | 1.1:-58855002 | MS.gene74860:CDS |
CGATGAAATGAGAATCAGAA+GGG | 0.621600 | 1.1:+58858855 | None:intergenic |
TCGATGAAATGAGAATCAGA+AGG | 0.623737 | 1.1:+58858854 | None:intergenic |
TGTCCTATAGAGTTATCAGT+TGG | 0.629309 | 1.1:-58856419 | MS.gene74860:CDS |
TGTGGTGGCTTGGTATTCGT+GGG | 0.637349 | 1.1:-58856529 | MS.gene74860:CDS |
ATACTGGGTATTTGGGGACA+AGG | 0.639049 | 1.1:+58856490 | None:intergenic |
AGGGAGAAATTGATTCCAGA+CGG | 0.640505 | 1.1:+58858874 | None:intergenic |
TTATCCGTTAATGTTGAAGG+TGG | 0.642451 | 1.1:-58855211 | MS.gene74860:CDS |
GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1.1:-58856301 | MS.gene74860:CDS |
CTTGTTACTACTCTGTCGTG+CGG | 0.643569 | 1.1:+58855139 | None:intergenic |
GGTGGTTGGAGATTGAAATG+GGG | 0.648046 | 1.1:-58855003 | MS.gene74860:CDS |
GTCCTTGTGTGAGAAGTGAT+GGG | 0.649485 | 1.1:-58855024 | MS.gene74860:CDS |
TTCAAGATGATTGATGCCCA+AGG | 0.650359 | 1.1:-58856452 | MS.gene74860:CDS |
GTCCCCAAATACCCAGTATG+CGG | 0.651631 | 1.1:-58856486 | MS.gene74860:CDS |
AAATTGATTCCAGACGGCGT+CGG | 0.652221 | 1.1:+58858880 | None:intergenic |
TAACAAGCAACCATCATGAG+AGG | 0.656101 | 1.1:-58855123 | MS.gene74860:CDS |
AAGGAATGTCTTGGAAACAA+CGG | 0.668714 | 1.1:+58858916 | None:intergenic |
CTTGTGTGAGAAGTGATGGG+TGG | 0.692248 | 1.1:-58855021 | MS.gene74860:CDS |
CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1.1:-58856298 | MS.gene74860:CDS |
AGTTGTGCGAGAGAGTATGG+CGG | 0.781955 | 1.1:+58858961 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACAAATAGAAAACTTAA+GGG | + | chr1.1:58858428-58858447 | None:intergenic | 15.0% |
!! | AACTGTTAATGAAAATATAT+TGG | + | chr1.1:58855469-58855488 | None:intergenic | 15.0% |
!! | AATATAAATGTAAACATAGT+AGG | + | chr1.1:58857806-58857825 | None:intergenic | 15.0% |
!! | ACTGTTAATGAAAATATATT+GGG | + | chr1.1:58855468-58855487 | None:intergenic | 15.0% |
!! | TAAAACAAATAGAAAACTTA+AGG | + | chr1.1:58858429-58858448 | None:intergenic | 15.0% |
!! | TTATTGTAGTTTGATATATT+GGG | - | chr1.1:58857869-58857888 | MS.gene74860:intron | 15.0% |
!!! | ACTAAATTTTGTATTCATAA+AGG | + | chr1.1:58855503-58855522 | None:intergenic | 15.0% |
!!! | AGGAATTTGAAATTTAATTT+AGG | + | chr1.1:58856504-58856523 | None:intergenic | 15.0% |
!!! | TTACATTTATATTTTTGTCA+TGG | - | chr1.1:58857813-58857832 | MS.gene74860:intron | 15.0% |
!!! | TTTAAATTTTGGTCTATTTA+AGG | - | chr1.1:58858031-58858050 | MS.gene74860:intron | 15.0% |
!!! | TTTAAGAAGTAAAAACATTT+TGG | + | chr1.1:58856767-58856786 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAACGCCA+TGG | + | chr1.1:58856052-58856071 | None:intergenic | 20.0% |
!! | AAATATATAGGATTGTTTGT+CGG | + | chr1.1:58856338-58856357 | None:intergenic | 20.0% |
!! | AAGAAAAATTTCTTTCTTGA+AGG | - | chr1.1:58858967-58858986 | MS.gene74860:CDS | 20.0% |
!! | AAGTGGAGAAAAATAAAAAT+AGG | + | chr1.1:58858335-58858354 | None:intergenic | 20.0% |
!! | ATAGCAATGAATTTATAGAA+AGG | + | chr1.1:58856524-58856543 | None:intergenic | 20.0% |
!! | ATATATGTTGTTATAGGAAA+AGG | + | chr1.1:58857108-58857127 | None:intergenic | 20.0% |
!! | ATGAATACAAAATTTAGTTG+AGG | - | chr1.1:58855505-58855524 | MS.gene74860:CDS | 20.0% |
!! | CTTATTGTAGTTTGATATAT+TGG | - | chr1.1:58857868-58857887 | MS.gene74860:intron | 20.0% |
!! | TAATGAAAAATTCAAGGAAA+TGG | + | chr1.1:58855595-58855614 | None:intergenic | 20.0% |
!! | TCAGTTATATATGTTGTTAT+AGG | + | chr1.1:58857114-58857133 | None:intergenic | 20.0% |
!! | TGATGCAATGAAAAATATAT+AGG | + | chr1.1:58856350-58856369 | None:intergenic | 20.0% |
!! | TGTAAAGTAACAAACAAATT+GGG | + | chr1.1:58856398-58856417 | None:intergenic | 20.0% |
!! | TTGTAAAGTAACAAACAAAT+TGG | + | chr1.1:58856399-58856418 | None:intergenic | 20.0% |
!!! | ATAACAATTCTTATGTTTTG+CGG | + | chr1.1:58858229-58858248 | None:intergenic | 20.0% |
!!! | CTTTATTTGAAACTGAATTA+CGG | + | chr1.1:58856703-58856722 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTACAACCACTA+TGG | - | chr1.1:58856063-58856082 | MS.gene74860:intron | 20.0% |
! | AAAGTATATTGCAAAAGTCT+TGG | - | chr1.1:58858790-58858809 | MS.gene74860:CDS | 25.0% |
! | AATAACAGAATTACAGATGA+AGG | + | chr1.1:58856276-58856295 | None:intergenic | 25.0% |
! | AATTAACAATTCACAGAGAA+AGG | + | chr1.1:58855572-58855591 | None:intergenic | 25.0% |
! | AATTGATGAATCTTTCTTGT+TGG | - | chr1.1:58855697-58855716 | MS.gene74860:intron | 25.0% |
! | AGTAAATTCCTAAGAAAACA+TGG | + | chr1.1:58857056-58857075 | None:intergenic | 25.0% |
! | AGTAACAGTATGGATTTAAA+TGG | - | chr1.1:58858169-58858188 | MS.gene74860:intron | 25.0% |
! | GATCAGTAATGAAAAATTCA+AGG | + | chr1.1:58855601-58855620 | None:intergenic | 25.0% |
! | GTTAATGAAAATATATTGGG+TGG | + | chr1.1:58855465-58855484 | None:intergenic | 25.0% |
! | TAGACCAAAATTTAAATCAC+TGG | + | chr1.1:58858027-58858046 | None:intergenic | 25.0% |
! | TAGTACTAAAATTGTCTGTT+TGG | - | chr1.1:58857497-58857516 | MS.gene74860:intron | 25.0% |
! | TTCTGCAATGATTAGAATAT+AGG | + | chr1.1:58857283-58857302 | None:intergenic | 25.0% |
!! | AATTTTTCATTACTGATCCA+TGG | - | chr1.1:58855603-58855622 | MS.gene74860:intron | 25.0% |
!! | ACAAAATGTGCTTTAAATCT+GGG | + | chr1.1:58855939-58855958 | None:intergenic | 25.0% |
!! | TACTCCAGTGATTTAAATTT+TGG | - | chr1.1:58858020-58858039 | MS.gene74860:intron | 25.0% |
!! | TTAGCTGTCATTTATTGATT+TGG | - | chr1.1:58857966-58857985 | MS.gene74860:intron | 25.0% |
!!! | AAAGCTATGTTTTAGATTCA+AGG | - | chr1.1:58858398-58858417 | MS.gene74860:intron | 25.0% |
!!! | ATCTGCATAGTTTCTTTTTT+TGG | - | chr1.1:58856301-58856320 | MS.gene74860:CDS | 25.0% |
!!! | CTTTTTGCATAAATTTTGAC+AGG | - | chr1.1:58858492-58858511 | MS.gene74860:intron | 25.0% |
!!! | TAGCTATGTGTTTTGATATA+CGG | + | chr1.1:58855901-58855920 | None:intergenic | 25.0% |
AAGGGAGAAAATGTGAAATT+TGG | - | chr1.1:58855171-58855190 | MS.gene74860:CDS | 30.0% | |
AATCTCCTCAGATATTTGAT+AGG | - | chr1.1:58856895-58856914 | MS.gene74860:intron | 30.0% | |
ACTTAATATCTAAGCTAACC+TGG | + | chr1.1:58855397-58855416 | None:intergenic | 30.0% | |
AGATATTTGATAGGCACATA+TGG | - | chr1.1:58856904-58856923 | MS.gene74860:intron | 30.0% | |
AGGATGAAGTTCCAAAAAAT+AGG | + | chr1.1:58856939-58856958 | None:intergenic | 30.0% | |
ATGGTTGACAAAAACATCAT+CGG | + | chr1.1:58856631-58856650 | None:intergenic | 30.0% | |
CAAAATTTAGTTGAGGCAAA+TGG | - | chr1.1:58855512-58855531 | MS.gene74860:CDS | 30.0% | |
CTGAAACTTATTAACTGTGT+AGG | - | chr1.1:58857130-58857149 | MS.gene74860:intron | 30.0% | |
CTGTTAAGGAGACAAATAAT+TGG | - | chr1.1:58857658-58857677 | MS.gene74860:intron | 30.0% | |
CTGTTGCAATACTATTATAC+TGG | - | chr1.1:58856800-58856819 | MS.gene74860:intron | 30.0% | |
CTTCCAGTATTGTCTAATAT+CGG | - | chr1.1:58856026-58856045 | MS.gene74860:intron | 30.0% | |
GAAATTCGAAAGGCAATTTA+CGG | + | chr1.1:58855664-58855683 | None:intergenic | 30.0% | |
GGACTTGGCAAATAAAATAA+TGG | + | chr1.1:58856562-58856581 | None:intergenic | 30.0% | |
GTAGTTTGATATATTGGGAT+TGG | - | chr1.1:58857874-58857893 | MS.gene74860:intron | 30.0% | |
TCATTCATTCTTCACTAACT+TGG | + | chr1.1:58855845-58855864 | None:intergenic | 30.0% | |
TTCCTAAGAAAACATGGTAT+TGG | + | chr1.1:58857050-58857069 | None:intergenic | 30.0% | |
TTCTTGAAGGAATAGAAGTT+AGG | - | chr1.1:58857694-58857713 | MS.gene74860:intron | 30.0% | |
TTGTCATGGTTCAATATACT+GGG | - | chr1.1:58857827-58857846 | MS.gene74860:intron | 30.0% | |
TTTGAACTTCTTCATCTTCA+AGG | + | chr1.1:58858915-58858934 | None:intergenic | 30.0% | |
TTTGTCATGGTTCAATATAC+TGG | - | chr1.1:58857826-58857845 | MS.gene74860:intron | 30.0% | |
! | AATCATTGCAGAACTACTTT+TGG | - | chr1.1:58857290-58857309 | MS.gene74860:intron | 30.0% |
! | ACTTTTGCAATATACTTTCC+TGG | + | chr1.1:58858788-58858807 | None:intergenic | 30.0% |
! | ATTTGAAACTGAATTACGGA+AGG | + | chr1.1:58856699-58856718 | None:intergenic | 30.0% |
! | GACAAAATGTGCTTTAAATC+TGG | + | chr1.1:58855940-58855959 | None:intergenic | 30.0% |
! | TACCAATACCATGTTTTCTT+AGG | - | chr1.1:58857045-58857064 | MS.gene74860:intron | 30.0% |
! | TGTTTTATGACGGCTTAATA+TGG | - | chr1.1:58856115-58856134 | MS.gene74860:intron | 30.0% |
!! | AGACAATTTTAGTACTACTG+TGG | + | chr1.1:58857494-58857513 | None:intergenic | 30.0% |
!! | CACATTGGTTTGAAATATGT+GGG | - | chr1.1:58858542-58858561 | MS.gene74860:CDS | 30.0% |
!! | TTTTGGTCTATTTAAGGCAT+TGG | - | chr1.1:58858037-58858056 | MS.gene74860:intron | 30.0% |
AAAACACATAGCTACTCCTT+GGG | - | chr1.1:58855907-58855926 | MS.gene74860:intron | 35.0% | |
AAGGAATGTCTTGGAAACAA+CGG | + | chr1.1:58854962-58854981 | None:intergenic | 35.0% | |
ACATTGCAATCCTGCTATAT+TGG | + | chr1.1:58858833-58858852 | None:intergenic | 35.0% | |
AGACAATACTGGAAGTGATA+TGG | + | chr1.1:58856021-58856040 | None:intergenic | 35.0% | |
AGACTCCAAATTACAAGCTA+CGG | + | chr1.1:58855992-58856011 | None:intergenic | 35.0% | |
AGATAGAAGAGTGAAGAGTA+TGG | + | chr1.1:58856220-58856239 | None:intergenic | 35.0% | |
ATACCTTCCACTTCAACATT+TGG | + | chr1.1:58857525-58857544 | None:intergenic | 35.0% | |
ATCTAAGCTAACCTGGAATT+AGG | + | chr1.1:58855390-58855409 | None:intergenic | 35.0% | |
ATGTGCCTATCAAATATCTG+AGG | + | chr1.1:58856903-58856922 | None:intergenic | 35.0% | |
ATTAACTGTGTAGGTCAACT+TGG | - | chr1.1:58857139-58857158 | MS.gene74860:intron | 35.0% | |
CAACTTGAATGTAATGAGCA+TGG | + | chr1.1:58856650-58856669 | None:intergenic | 35.0% | |
CAATACCAAGGCTTAAAACA+GGG | + | chr1.1:58856434-58856453 | None:intergenic | 35.0% | |
CGATGAAATGAGAATCAGAA+GGG | + | chr1.1:58855023-58855042 | None:intergenic | 35.0% | |
GACAGAGTTTGAGGAATTAT+CGG | - | chr1.1:58854879-58854898 | MS.gene74860:CDS | 35.0% | |
GACTTATCCGTTAATGTTGA+AGG | - | chr1.1:58858661-58858680 | MS.gene74860:intron | 35.0% | |
GAGACAAATAATTGGAAGAG+AGG | - | chr1.1:58857666-58857685 | MS.gene74860:intron | 35.0% | |
GAGATTGGTGAAGAAAAGAA+AGG | + | chr1.1:58855642-58855661 | None:intergenic | 35.0% | |
GAGTAAATGCTAATCAGTAG+TGG | + | chr1.1:58855733-58855752 | None:intergenic | 35.0% | |
GATCATTGTCGATGATGATA+GGG | + | chr1.1:58855122-58855141 | None:intergenic | 35.0% | |
GCAGTATACTGAGTATATAG+AGG | + | chr1.1:58858589-58858608 | None:intergenic | 35.0% | |
GGAAGGAATGTCAGAAAATA+TGG | + | chr1.1:58856682-58856701 | None:intergenic | 35.0% | |
GGTATTCTTCTTGTAATCTC+CGG | - | chr1.1:58855146-58855165 | MS.gene74860:CDS | 35.0% | |
GTATTCTTCTTGTAATCTCC+GGG | - | chr1.1:58855147-58855166 | MS.gene74860:CDS | 35.0% | |
GTCAGTCCTTCTTCATTATA+CGG | + | chr1.1:58858106-58858125 | None:intergenic | 35.0% | |
TACTGAGTATATAGAGGCAA+TGG | + | chr1.1:58858583-58858602 | None:intergenic | 35.0% | |
TATCTGTTTGGATCCAAATG+TGG | - | chr1.1:58858705-58858724 | MS.gene74860:intron | 35.0% | |
TATGGACAATTTGTGAAGGA+TGG | - | chr1.1:58856081-58856100 | MS.gene74860:intron | 35.0% | |
TCGATGAAATGAGAATCAGA+AGG | + | chr1.1:58855024-58855043 | None:intergenic | 35.0% | |
TGAAATGCAGAGCTTTCAAT+TGG | - | chr1.1:58855269-58855288 | MS.gene74860:CDS | 35.0% | |
TGAGGAGATTATAGACTACA+AGG | + | chr1.1:58856885-58856904 | None:intergenic | 35.0% | |
TGATCATTGTCGATGATGAT+AGG | + | chr1.1:58855123-58855142 | None:intergenic | 35.0% | |
TGTCCTATAGAGTTATCAGT+TGG | - | chr1.1:58857456-58857475 | MS.gene74860:intron | 35.0% | |
TTATCCGTTAATGTTGAAGG+TGG | - | chr1.1:58858664-58858683 | MS.gene74860:intron | 35.0% | |
TTCAGATTGCTAATAACCCT+TGG | - | chr1.1:58855240-58855259 | MS.gene74860:CDS | 35.0% | |
TTTATGACGGCTTAATATGG+AGG | - | chr1.1:58856118-58856137 | MS.gene74860:intron | 35.0% | |
TTTCAATTGGACAGAAAGAG+TGG | - | chr1.1:58855282-58855301 | MS.gene74860:CDS | 35.0% | |
TTTCTCCACTTATTTGAGCA+GGG | - | chr1.1:58858344-58858363 | MS.gene74860:intron | 35.0% | |
TTTGGATCCAAATGTTGAAG+TGG | - | chr1.1:58857515-58857534 | MS.gene74860:intron | 35.0% | |
! | AGATAGATTTAGAGCTGCTA+TGG | + | chr1.1:58858690-58858709 | None:intergenic | 35.0% |
! | CTTGGATTAGAATATTCACC+AGG | + | chr1.1:58855827-58855846 | None:intergenic | 35.0% |
! | GTGAAGAAAAGAAAGGCATA+AGG | + | chr1.1:58855635-58855654 | None:intergenic | 35.0% |
! | TTGGGATTGGATAACTGTTT+TGG | - | chr1.1:58857887-58857906 | MS.gene74860:intron | 35.0% |
! | TTTTCTCCACTTATTTGAGC+AGG | - | chr1.1:58858343-58858362 | MS.gene74860:intron | 35.0% |
!! | CAGCTCTAAATCTATCTGTT+TGG | - | chr1.1:58858693-58858712 | MS.gene74860:intron | 35.0% |
!! | GCACATTGGTTTGAAATATG+TGG | - | chr1.1:58858541-58858560 | MS.gene74860:CDS | 35.0% |
!! | GGGCAGAGATTTTAAAAATG+TGG | + | chr1.1:58856378-58856397 | None:intergenic | 35.0% |
!!! | AGATACAGAGCTTTTTTGGT+AGG | + | chr1.1:58855084-58855103 | None:intergenic | 35.0% |
!!! | AGCAAGATACAGAGCTTTTT+TGG | + | chr1.1:58855088-58855107 | None:intergenic | 35.0% |
AAACTCCCTGCTCAAATAAG+TGG | + | chr1.1:58858352-58858371 | None:intergenic | 40.0% | |
AACATTCCACGAACTATGCA+AGG | - | chr1.1:58857737-58857756 | MS.gene74860:intron | 40.0% | |
AAGAAGCAATAGCGTATCAC+TGG | + | chr1.1:58855546-58855565 | None:intergenic | 40.0% | |
AAGAGAGGTCTCTTTCTTGA+AGG | - | chr1.1:58857681-58857700 | MS.gene74860:intron | 40.0% | |
AATGGAAGCAGTGTCTTAAG+TGG | - | chr1.1:58858187-58858206 | MS.gene74860:intron | 40.0% | |
ACAGAAACTTGTACAAGCAC+TGG | + | chr1.1:58855966-58855985 | None:intergenic | 40.0% | |
ACATTCCACGAACTATGCAA+GGG | - | chr1.1:58857738-58857757 | MS.gene74860:intron | 40.0% | |
ACTGAGTGAAAAGCTGAAAG+TGG | + | chr1.1:58857259-58857278 | None:intergenic | 40.0% | |
AGGAATAGAAGTTAGGCCTA+AGG | - | chr1.1:58857701-58857720 | MS.gene74860:intron | 40.0% | |
AGGCACGTACTCAAATCTTT+GGG | + | chr1.1:58858638-58858657 | None:intergenic | 40.0% | |
ATCGTGCTTGAGTAACAGTA+TGG | - | chr1.1:58858159-58858178 | MS.gene74860:intron | 40.0% | |
ATGATAGACGCTATTGGAAC+TGG | - | chr1.1:58855355-58855374 | MS.gene74860:CDS | 40.0% | |
ATGCATCATAACAGAGCAGT+AGG | - | chr1.1:58857543-58857562 | MS.gene74860:intron | 40.0% | |
ATGGCCACCTTCAACATTAA+CGG | + | chr1.1:58858671-58858690 | None:intergenic | 40.0% | |
ATTGGGGAGTTTGTCAATTC+AGG | - | chr1.1:58857612-58857631 | MS.gene74860:intron | 40.0% | |
CAAAACACATAGCTACTCCT+TGG | - | chr1.1:58855906-58855925 | MS.gene74860:intron | 40.0% | |
CAACAAAGCTTAGCAACTTC+AGG | + | chr1.1:58858520-58858539 | None:intergenic | 40.0% | |
CATCATCGACAATGATCAGA+AGG | - | chr1.1:58855125-58855144 | MS.gene74860:CDS | 40.0% | |
CCACTATGGACAATTTGTGA+AGG | - | chr1.1:58856077-58856096 | MS.gene74860:intron | 40.0% | |
CCTTCACAAATTGTCCATAG+TGG | + | chr1.1:58856080-58856099 | None:intergenic | 40.0% | |
CTGCATTTCAACACATCCAA+GGG | + | chr1.1:58855259-58855278 | None:intergenic | 40.0% | |
GAAAGGCAATTTACGGAGAT+TGG | + | chr1.1:58855657-58855676 | None:intergenic | 40.0% | |
GAACATGTGTAGCAATACCA+AGG | + | chr1.1:58856446-58856465 | None:intergenic | 40.0% | |
GACTCCAAATTACAAGCTAC+GGG | + | chr1.1:58855991-58856010 | None:intergenic | 40.0% | |
GAGTTTGAGGAATTATCGGA+AGG | - | chr1.1:58854883-58854902 | MS.gene74860:CDS | 40.0% | |
GATCCAAATGTTGAAGTGGA+AGG | - | chr1.1:58857519-58857538 | MS.gene74860:intron | 40.0% | |
GCAATACCAAGGCTTAAAAC+AGG | + | chr1.1:58856435-58856454 | None:intergenic | 40.0% | |
GCACCAACTGATAACTCTAT+AGG | + | chr1.1:58857462-58857481 | None:intergenic | 40.0% | |
GCTGAACCGTATAATGAAGA+AGG | - | chr1.1:58858097-58858116 | MS.gene74860:intron | 40.0% | |
GGATTAGAATATTCACCAGG+AGG | + | chr1.1:58855824-58855843 | None:intergenic | 40.0% | |
GGATTTCTATGCCTAATTCC+AGG | - | chr1.1:58855376-58855395 | MS.gene74860:intron | 40.0% | |
GTAAGATGTAGTGCAAATGC+AGG | + | chr1.1:58857028-58857047 | None:intergenic | 40.0% | |
GTATTGTCTAATATCGGCCA+TGG | - | chr1.1:58856032-58856051 | MS.gene74860:intron | 40.0% | |
GTGAAGAATGAATGACCACA+AGG | - | chr1.1:58855850-58855869 | MS.gene74860:intron | 40.0% | |
TAAATCTGGGTTTGAACCCA+AGG | + | chr1.1:58855926-58855945 | None:intergenic | 40.0% | |
TAACAAGCAACCATCATGAG+AGG | - | chr1.1:58858752-58858771 | MS.gene74860:CDS | 40.0% | |
TAGATCTCTCTCCATTGCTT+GGG | - | chr1.1:58855329-58855348 | MS.gene74860:CDS | 40.0% | |
TATCACAAACTAGTGAGTGC+TGG | + | chr1.1:58858138-58858157 | None:intergenic | 40.0% | |
TATTGCAAAAGTCTTGGTCC+TGG | - | chr1.1:58858796-58858815 | MS.gene74860:CDS | 40.0% | |
TCATCAATTCCTTGTGCAAC+TGG | + | chr1.1:58855686-58855705 | None:intergenic | 40.0% | |
TCATCTGGACTTCATCTTCT+AGG | + | chr1.1:58857638-58857657 | None:intergenic | 40.0% | |
TCTGCATTTCAACACATCCA+AGG | + | chr1.1:58855260-58855279 | None:intergenic | 40.0% | |
TGAAGTCCAGATGACTGTTA+AGG | - | chr1.1:58857644-58857663 | MS.gene74860:intron | 40.0% | |
TGGATCCAAATGTGGAACAT+AGG | - | chr1.1:58858713-58858732 | MS.gene74860:intron | 40.0% | |
TGGCCGATATTAGACAATAC+TGG | + | chr1.1:58856032-58856051 | None:intergenic | 40.0% | |
TGTGCAACTGGAAATTCGAA+AGG | + | chr1.1:58855674-58855693 | None:intergenic | 40.0% | |
TTCAAGATGATTGATGCCCA+AGG | - | chr1.1:58857423-58857442 | MS.gene74860:intron | 40.0% | |
TTCGAATTTCCAGTTGCACA+AGG | - | chr1.1:58855674-58855693 | MS.gene74860:intron | 40.0% | |
TTCTTGTAATCTCCGGGAAA+GGG | - | chr1.1:58855153-58855172 | MS.gene74860:CDS | 40.0% | |
TTGATAGGCACATATGGCTA+CGG | - | chr1.1:58856910-58856929 | MS.gene74860:intron | 40.0% | |
TTGTCTCCTTAACAGTCATC+TGG | + | chr1.1:58857653-58857672 | None:intergenic | 40.0% | |
TTTGTGCTTCAAGCTGAACT+CGG | + | chr1.1:58856250-58856269 | None:intergenic | 40.0% | |
! | AAGTGAAGTGTTATCGATGG+TGG | + | chr1.1:58856173-58856192 | None:intergenic | 40.0% |
! | ACATTAACGGATAAGTCCAC+AGG | + | chr1.1:58858658-58858677 | None:intergenic | 40.0% |
! | AGGGAGAAATTGATTCCAGA+CGG | + | chr1.1:58855004-58855023 | None:intergenic | 40.0% |
! | CTGAAGTGAAGTGTTATCGA+TGG | + | chr1.1:58856176-58856195 | None:intergenic | 40.0% |
! | GTTACCCGTAGCTTGTAATT+TGG | - | chr1.1:58855984-58856003 | MS.gene74860:intron | 40.0% |
! | GTTGCTGAATGGTCTTACTT+AGG | + | chr1.1:58857720-58857739 | None:intergenic | 40.0% |
! | TCATATTTTCAACTGCCTCC+TGG | - | chr1.1:58855806-58855825 | MS.gene74860:intron | 40.0% |
! | TGCACTGTGGTGTTTTATGA+CGG | - | chr1.1:58856105-58856124 | MS.gene74860:intron | 40.0% |
! | TTATGGGCTGAACGAGTTAA+AGG | - | chr1.1:58857167-58857186 | MS.gene74860:intron | 40.0% |
! | TTCACATTTTCTCCCTTTCC+CGG | + | chr1.1:58855168-58855187 | None:intergenic | 40.0% |
!! | AGGACAGTTCTGAAATCCTT+GGG | + | chr1.1:58857442-58857461 | None:intergenic | 40.0% |
!! | CTAAGCTTTGTTGTGCACAT+TGG | - | chr1.1:58858527-58858546 | MS.gene74860:CDS | 40.0% |
!! | TAGGACAGTTCTGAAATCCT+TGG | + | chr1.1:58857443-58857462 | None:intergenic | 40.0% |
!! | TTGCAGAACTACTTTTGGAC+AGG | - | chr1.1:58857295-58857314 | MS.gene74860:intron | 40.0% |
!!! | AGCTTTTTTGGTAGGAACGT+TGG | + | chr1.1:58855076-58855095 | None:intergenic | 40.0% |
!!! | ATGTGTTTTGATATACGGCG+TGG | + | chr1.1:58855896-58855915 | None:intergenic | 40.0% |
!!! | GGATTTTTTCCTTTCCACCA+TGG | - | chr1.1:58856139-58856158 | MS.gene74860:intron | 40.0% |
AAGATTTGAGTACGTGCCTG+TGG | - | chr1.1:58858639-58858658 | MS.gene74860:intron | 45.0% | |
AAGCCGCATACTGGGTATTT+GGG | + | chr1.1:58857395-58857414 | None:intergenic | 45.0% | |
ACACAAGATAAGCCGCATAC+TGG | + | chr1.1:58857404-58857423 | None:intergenic | 45.0% | |
ACTGTGTAGGTCAACTTGGT+TGG | - | chr1.1:58857143-58857162 | MS.gene74860:intron | 45.0% | |
AGATCTCTCTCCATTGCTTG+GGG | - | chr1.1:58855330-58855349 | MS.gene74860:CDS | 45.0% | |
AGGTCAACTTGGTTGGGTTA+TGG | - | chr1.1:58857150-58857169 | MS.gene74860:intron | 45.0% | |
ATACTGGGTATTTGGGGACA+AGG | + | chr1.1:58857388-58857407 | None:intergenic | 45.0% | |
ATATTGGACATGCTCCATCC+AGG | + | chr1.1:58858817-58858836 | None:intergenic | 45.0% | |
CAAGAAGCTCAGCAACTTCA+GGG | + | chr1.1:58857323-58857342 | None:intergenic | 45.0% | |
CACAAGATAAGCCGCATACT+GGG | + | chr1.1:58857403-58857422 | None:intergenic | 45.0% | |
CAGGCACGTACTCAAATCTT+TGG | + | chr1.1:58858639-58858658 | None:intergenic | 45.0% | |
CATTCCACGAACTATGCAAG+GGG | - | chr1.1:58857739-58857758 | MS.gene74860:intron | 45.0% | |
CTAGATCTCTCTCCATTGCT+TGG | - | chr1.1:58855328-58855347 | MS.gene74860:CDS | 45.0% | |
CTGTGTAGGTCAACTTGGTT+GGG | - | chr1.1:58857144-58857163 | MS.gene74860:intron | 45.0% | |
CTTCTTGTAATCTCCGGGAA+AGG | - | chr1.1:58855152-58855171 | MS.gene74860:CDS | 45.0% | |
CTTGTTACTACTCTGTCGTG+CGG | + | chr1.1:58858739-58858758 | None:intergenic | 45.0% | |
GAGTTCAGCTTGAAGCACAA+AGG | - | chr1.1:58856249-58856268 | MS.gene74860:CDS | 45.0% | |
GGTCAACTTGGTTGGGTTAT+GGG | - | chr1.1:58857151-58857170 | MS.gene74860:intron | 45.0% | |
GTCCTTGTGTGAGAAGTGAT+GGG | - | chr1.1:58858851-58858870 | MS.gene74860:CDS | 45.0% | |
GTTCGTGGAATGTTGCTGAA+TGG | + | chr1.1:58857731-58857750 | None:intergenic | 45.0% | |
TAAGCCGCATACTGGGTATT+TGG | + | chr1.1:58857396-58857415 | None:intergenic | 45.0% | |
TCAAGAAGCTCAGCAACTTC+AGG | + | chr1.1:58857324-58857343 | None:intergenic | 45.0% | |
TCTATCATCACCCCAAGCAA+TGG | + | chr1.1:58855343-58855362 | None:intergenic | 45.0% | |
TGCCAAGTCCTTAACTAGTC+AGG | - | chr1.1:58856572-58856591 | MS.gene74860:intron | 45.0% | |
TGGAGCATGTCCAATATAGC+AGG | - | chr1.1:58858820-58858839 | MS.gene74860:CDS | 45.0% | |
TGTCCAGGTATCTATGCATG+TGG | + | chr1.1:58857001-58857020 | None:intergenic | 45.0% | |
TGTCCTTGTGTGAGAAGTGA+TGG | - | chr1.1:58858850-58858869 | MS.gene74860:CDS | 45.0% | |
TTGCTGAGCTTCTTGAAGTG+TGG | - | chr1.1:58857328-58857347 | MS.gene74860:intron | 45.0% | |
! | AAATTGATTCCAGACGGCGT+CGG | + | chr1.1:58854998-58855017 | None:intergenic | 45.0% |
! | AAGGCATAAGGCATCTTCCA+TGG | + | chr1.1:58855623-58855642 | None:intergenic | 45.0% |
! | GTCCTGACTAGTTAAGGACT+TGG | + | chr1.1:58856577-58856596 | None:intergenic | 45.0% |
!! | AAACTAGTGAGTGCTGGAGA+AGG | + | chr1.1:58858132-58858151 | None:intergenic | 45.0% |
!! | GAAGTGTTATCGATGGTGGA+TGG | + | chr1.1:58856169-58856188 | None:intergenic | 45.0% |
!!! | GGCTACGGTCTCCTATTTTT+TGG | - | chr1.1:58856925-58856944 | MS.gene74860:intron | 45.0% |
!! | ATTTAAATATTTAAAAGTTA+TGG | - | chr1.1:58858301-58858320 | MS.gene74860:intron | 5.0% |
!!! | TATTTGTTTTATTTTATTTT+TGG | - | chr1.1:58858438-58858457 | MS.gene74860:intron | 5.0% |
AAACCGAGTCAGCATGCGTA+TGG | - | chr1.1:58856858-58856877 | MS.gene74860:intron | 50.0% | |
AACCCTCAACTCTGAACGCT+GGG | - | chr1.1:58857989-58858008 | MS.gene74860:intron | 50.0% | |
AACCGAGTCAGCATGCGTAT+GGG | - | chr1.1:58856859-58856878 | MS.gene74860:intron | 50.0% | |
AGCCGCATACTGGGTATTTG+GGG | + | chr1.1:58857394-58857413 | None:intergenic | 50.0% | |
AGGCCACATGCATAGATACC+TGG | - | chr1.1:58856995-58857014 | MS.gene74860:intron | 50.0% | |
AGTACTACTGTGGCCACCTT+CGG | + | chr1.1:58857484-58857503 | None:intergenic | 50.0% | |
ATCCTTACACTTGCAGCTGC+AGG | - | chr1.1:58856954-58856973 | MS.gene74860:intron | 50.0% | |
CACCCATCACTTCTCACACA+AGG | + | chr1.1:58858856-58858875 | None:intergenic | 50.0% | |
CATACGAGCTCCTCTCATGA+TGG | + | chr1.1:58858765-58858784 | None:intergenic | 50.0% | |
CATACTCTCTCGCACAACTC+CGG | - | chr1.1:58854918-58854937 | MS.gene74860:CDS | 50.0% | |
CCTTAACTAGTCAGGACAGC+AGG | - | chr1.1:58856580-58856599 | MS.gene74860:intron | 50.0% | |
CTGAGCTTCTTGAAGTGTGG+TGG | - | chr1.1:58857331-58857350 | MS.gene74860:intron | 50.0% | |
CTTCTTGAAGTGTGGTGGCT+TGG | - | chr1.1:58857336-58857355 | MS.gene74860:intron | 50.0% | |
CTTGCAGCTGCAGGAATATG+CGG | - | chr1.1:58856963-58856982 | MS.gene74860:intron | 50.0% | |
GCAAAAGTCTTGGTCCTGGA+TGG | - | chr1.1:58858800-58858819 | MS.gene74860:CDS | 50.0% | |
GGAATATGCGGAAGCTGACT+AGG | - | chr1.1:58856975-58856994 | MS.gene74860:intron | 50.0% | |
GGGGTGATGATAGACGCTAT+TGG | - | chr1.1:58855349-58855368 | MS.gene74860:CDS | 50.0% | |
GGTGGTTGGAGATCGAGATT+GGG | - | chr1.1:58857595-58857614 | MS.gene74860:intron | 50.0% | |
GTAGGAACGTTGGCAAGAGA+AGG | + | chr1.1:58855066-58855085 | None:intergenic | 50.0% | |
GTCCCCAAATACCCAGTATG+CGG | - | chr1.1:58857389-58857408 | MS.gene74860:intron | 50.0% | |
GTCCTAGTGTGAGAAGCGAT+GGG | - | chr1.1:58857574-58857593 | MS.gene74860:intron | 50.0% | |
GTGGTTGGAGATCGAGATTG+GGG | - | chr1.1:58857596-58857615 | MS.gene74860:intron | 50.0% | |
TAACTAGTCAGGACAGCAGG+TGG | - | chr1.1:58856583-58856602 | MS.gene74860:intron | 50.0% | |
TGCGGCCTATGTTCCACATT+TGG | + | chr1.1:58858721-58858740 | None:intergenic | 50.0% | |
TTCCTGCAGCTGCAAGTGTA+AGG | + | chr1.1:58856959-58856978 | None:intergenic | 50.0% | |
! | AGTTGTGCGAGAGAGTATGG+CGG | + | chr1.1:58854917-58854936 | None:intergenic | 50.0% |
! | CCTGCTGTCCTGACTAGTTA+AGG | + | chr1.1:58856583-58856602 | None:intergenic | 50.0% |
!! | GAGTTATCAGTTGGTGCCGA+AGG | - | chr1.1:58857465-58857484 | MS.gene74860:intron | 50.0% |
!! | TGCAGCCCTGTTTTAAGCCT+TGG | - | chr1.1:58856426-58856445 | MS.gene74860:CDS | 50.0% |
!! | TGTGGTGGCTTGGTATTCGT+GGG | - | chr1.1:58857346-58857365 | MS.gene74860:intron | 50.0% |
!! | TTATCAGTTGGTGCCGAAGG+TGG | - | chr1.1:58857468-58857487 | MS.gene74860:intron | 50.0% |
AACACTACGGTGGCACCTTG+TGG | + | chr1.1:58855868-58855887 | None:intergenic | 55.0% | |
ACCCTCAACTCTGAACGCTG+GGG | - | chr1.1:58857990-58858009 | MS.gene74860:intron | 55.0% | |
AGGACCCCTTGCATAGTTCG+TGG | + | chr1.1:58857746-58857765 | None:intergenic | 55.0% | |
ATGAGAGGAGCTCGTATGCC+AGG | - | chr1.1:58858767-58858786 | MS.gene74860:CDS | 55.0% | |
CACCCATCGCTTCTCACACT+AGG | + | chr1.1:58857579-58857598 | None:intergenic | 55.0% | |
CGGAGTTGTGCGAGAGAGTA+TGG | + | chr1.1:58854920-58854939 | None:intergenic | 55.0% | |
CGTCCTAGTGTGAGAAGCGA+TGG | - | chr1.1:58857573-58857592 | MS.gene74860:intron | 55.0% | |
CTAGTGTGAGAAGCGATGGG+TGG | - | chr1.1:58857577-58857596 | MS.gene74860:intron | 55.0% | |
GAACCCTCAACTCTGAACGC+TGG | - | chr1.1:58857988-58858007 | MS.gene74860:intron | 55.0% | |
GCAAATGCAGGTCTGTGTCC+AGG | + | chr1.1:58857016-58857035 | None:intergenic | 55.0% | |
GGAAACAACGGAGAGTCTGC+CGG | + | chr1.1:58854950-58854969 | None:intergenic | 55.0% | |
GGCGGCAGAAAGGAATGTCT+TGG | + | chr1.1:58854971-58854990 | None:intergenic | 55.0% | |
GGGTATTTGGGGACAAGGCA+AGG | + | chr1.1:58857383-58857402 | None:intergenic | 55.0% | |
GGGTGGTTGGAGATCGAGAT+TGG | - | chr1.1:58857594-58857613 | MS.gene74860:intron | 55.0% | |
TGTGAAGGATGGCTGCACTG+TGG | - | chr1.1:58856092-58856111 | MS.gene74860:intron | 55.0% | |
TGTGAGAAGCGATGGGTGGT+TGG | - | chr1.1:58857581-58857600 | MS.gene74860:intron | 55.0% | |
TGTTACGCCACCTAAGACGC+AGG | + | chr1.1:58857766-58857785 | None:intergenic | 55.0% | |
! | ATTCCAGACGGCGTCGGAAT+CGG | + | chr1.1:58854992-58855011 | None:intergenic | 55.0% |
! | GATGGCAGACCATGGTGGAA+AGG | + | chr1.1:58856151-58856170 | None:intergenic | 55.0% |
!! | CGCATGCTGACTCGGTTTGT+TGG | + | chr1.1:58856856-58856875 | None:intergenic | 55.0% |
!! | CGGCGTGGCTTTGAACACTA+CGG | + | chr1.1:58855881-58855900 | None:intergenic | 55.0% |
!! | CGTGGCTTTGAACACTACGG+TGG | + | chr1.1:58855878-58855897 | None:intergenic | 55.0% |
!! | GTGTGGTGGCTTGGTATTCG+TGG | - | chr1.1:58857345-58857364 | MS.gene74860:intron | 55.0% |
AAGGGGTCCTGCGTCTTAGG+TGG | - | chr1.1:58857756-58857775 | MS.gene74860:intron | 60.0% | |
AGCCCCAGCGTTCAGAGTTG+AGG | + | chr1.1:58857995-58858014 | None:intergenic | 60.0% | |
AGGACAGCAGGTGGTCGTTG+AGG | - | chr1.1:58856592-58856611 | MS.gene74860:intron | 60.0% | |
GCCCCAGCGTTCAGAGTTGA+GGG | + | chr1.1:58857994-58858013 | None:intergenic | 60.0% | |
TGCAAGGGGTCCTGCGTCTT+AGG | - | chr1.1:58857753-58857772 | MS.gene74860:intron | 60.0% | |
! | GGCCCATACGCATGCTGACT+CGG | + | chr1.1:58856864-58856883 | None:intergenic | 60.0% |
! | TGGTGGATGGCAGACCATGG+TGG | + | chr1.1:58856156-58856175 | None:intergenic | 60.0% |
!! | CGATGGTGGATGGCAGACCA+TGG | + | chr1.1:58856159-58856178 | None:intergenic | 60.0% |
CGTCGGAATCGGCGGCAGAA+AGG | + | chr1.1:58854981-58855000 | None:intergenic | 65.0% | |
CGCACAACTCCGGCTGACGC+CGG | - | chr1.1:58854928-58854947 | MS.gene74860:CDS | 70.0% | |
GAGAGTCTGCCGGCGTCAGC+CGG | + | chr1.1:58854940-58854959 | None:intergenic | 70.0% | |
! | CCAGACGGCGTCGGAATCGG+CGG | + | chr1.1:58854989-58855008 | None:intergenic | 70.0% |
!! | CCGCCGATTCCGACGCCGTC+TGG | - | chr1.1:58854986-58855005 | MS.gene74860:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 58854877 | 58859020 | 58854877 | ID=MS.gene74860 |
chr1.1 | mRNA | 58854877 | 58859020 | 58854877 | ID=MS.gene74860.t1;Parent=MS.gene74860 |
chr1.1 | exon | 58858751 | 58859020 | 58858751 | ID=MS.gene74860.t1.exon1;Parent=MS.gene74860.t1 |
chr1.1 | CDS | 58858751 | 58859020 | 58858751 | ID=cds.MS.gene74860.t1;Parent=MS.gene74860.t1 |
chr1.1 | exon | 58858500 | 58858618 | 58858500 | ID=MS.gene74860.t1.exon2;Parent=MS.gene74860.t1 |
chr1.1 | CDS | 58858500 | 58858618 | 58858500 | ID=cds.MS.gene74860.t1;Parent=MS.gene74860.t1 |
chr1.1 | exon | 58856176 | 58856580 | 58856176 | ID=MS.gene74860.t1.exon3;Parent=MS.gene74860.t1 |
chr1.1 | CDS | 58856176 | 58856580 | 58856176 | ID=cds.MS.gene74860.t1;Parent=MS.gene74860.t1 |
chr1.1 | exon | 58855478 | 58855532 | 58855478 | ID=MS.gene74860.t1.exon4;Parent=MS.gene74860.t1 |
chr1.1 | CDS | 58855478 | 58855532 | 58855478 | ID=cds.MS.gene74860.t1;Parent=MS.gene74860.t1 |
chr1.1 | exon | 58854877 | 58855383 | 58854877 | ID=MS.gene74860.t1.exon5;Parent=MS.gene74860.t1 |
chr1.1 | CDS | 58854877 | 58855383 | 58854877 | ID=cds.MS.gene74860.t1;Parent=MS.gene74860.t1 |
Gene Sequence |
Protein sequence |