AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010866


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010866.t1 MTR_3g107120 70.657 426 95 6 1 424 1 398 0.0 570
MS.gene010866.t1 MTR_3g107160 50.235 426 170 7 1 422 1 388 3.86e-125 369
MS.gene010866.t1 MTR_3g107100 49.537 432 163 7 1 414 1 395 1.86e-115 344
MS.gene010866.t1 MTR_2g007450 39.775 445 194 14 6 414 11 417 1.82e-76 244
MS.gene010866.t1 MTR_1g053025 39.529 425 200 12 11 416 2 388 5.64e-76 242
MS.gene010866.t1 MTR_4g098590 42.963 405 176 15 13 401 1 366 2.30e-73 235
MS.gene010866.t1 MTR_2g007400 39.202 426 200 13 11 414 12 400 4.17e-73 235
MS.gene010866.t1 MTR_3g107140 62.434 189 70 1 28 216 9 196 3.03e-72 226
MS.gene010866.t1 MTR_1g107385 39.627 429 194 14 11 414 32 420 6.07e-70 228
MS.gene010866.t1 MTR_7g075820 36.916 428 204 11 11 414 6 391 4.60e-66 217
MS.gene010866.t1 MTR_5g083890 38.732 426 191 12 11 406 6 391 3.79e-64 215
MS.gene010866.t1 MTR_3g099830 38.186 419 185 15 11 414 12 371 5.41e-64 211
MS.gene010866.t1 MTR_3g026920 35.874 446 192 12 11 419 19 407 8.33e-64 211
MS.gene010866.t1 MTR_2g007500 40.947 359 165 10 5 347 8 335 1.95e-63 208
MS.gene010866.t1 MTR_2g005990 36.557 424 212 13 11 414 6 392 3.83e-62 206
MS.gene010866.t1 MTR_2g008310 37.890 417 196 14 11 414 2 368 7.71e-59 198
MS.gene010866.t1 MTR_2g008320 37.081 418 208 12 11 416 52 426 9.75e-59 199
MS.gene010866.t1 MTR_2g007360 37.442 430 173 19 11 414 12 371 1.27e-57 194
MS.gene010866.t1 MTR_7g007080 36.386 415 215 12 11 416 4 378 7.73e-56 190
MS.gene010866.t1 MTR_7g083740 34.353 425 205 13 1 416 7 366 1.79e-53 183
MS.gene010866.t1 MTR_7g032380 34.180 433 186 17 1 414 1 353 2.75e-53 182
MS.gene010866.t1 MTR_1g041245 33.875 431 220 14 1 414 1 383 8.11e-53 182
MS.gene010866.t1 MTR_7g007340 36.430 409 178 15 11 409 13 349 1.44e-52 181
MS.gene010866.t1 MTR_3g106960 49.565 230 84 7 198 421 1 204 3.16e-52 176
MS.gene010866.t1 MTR_3g108150 33.254 418 221 11 11 415 13 385 2.84e-50 175
MS.gene010866.t1 MTR_7g098570 35.890 365 196 11 11 364 20 357 4.39e-47 169
MS.gene010866.t1 MTR_7g098510 33.871 434 214 16 4 416 9 390 4.98e-47 166
MS.gene010866.t1 MTR_5g073420 33.504 391 217 12 11 391 11 368 1.63e-46 165
MS.gene010866.t1 MTR_2g007550 32.500 440 167 16 1 416 1 334 3.26e-45 160
MS.gene010866.t1 MTR_3g036250 33.176 425 201 13 9 414 3 363 1.41e-44 159
MS.gene010866.t1 MTR_3g040700 33.770 382 204 10 2 371 34 378 5.17e-44 159
MS.gene010866.t1 MTR_7g032370 33.333 405 200 14 23 414 2 349 7.01e-44 157
MS.gene010866.t1 MTR_7g088260 31.742 419 225 14 11 416 91 461 8.44e-43 157
MS.gene010866.t1 MTR_7g098480 32.311 424 216 13 4 411 9 377 8.53e-42 154
MS.gene010866.t1 MTR_3g023630 32.782 363 207 10 11 364 8 342 1.27e-41 152
MS.gene010866.t1 MTR_7g056433 32.715 431 221 16 6 416 7 388 1.39e-41 152
MS.gene010866.t1 MTR_7g033990 32.019 431 219 16 1 411 1 377 3.42e-41 152
MS.gene010866.t1 MTR_0543s0010 33.255 424 205 16 11 416 86 449 4.55e-41 152
MS.gene010866.t1 MTR_5g008950 32.847 411 218 14 13 414 1 362 6.76e-41 150
MS.gene010866.t1 MTR_7g026500 31.336 434 223 16 10 418 13 396 1.74e-40 149
MS.gene010866.t1 MTR_5g008920 31.190 420 230 15 6 414 7 378 2.03e-40 149
MS.gene010866.t1 MTR_5g058100 33.176 425 211 16 11 414 9 381 3.99e-40 148
MS.gene010866.t1 MTR_7g115270 31.567 434 221 14 11 414 12 399 5.32e-40 148
MS.gene010866.t1 MTR_3g082890 30.612 392 213 12 1 359 81 446 7.64e-40 149
MS.gene010866.t1 MTR_1089s0010 32.067 421 223 13 8 414 5 376 3.65e-39 145
MS.gene010866.t1 MTR_5g045170 30.140 428 234 13 13 422 16 396 5.80e-39 145
MS.gene010866.t1 MTR_0492s0020 34.204 383 191 15 11 375 86 425 2.63e-38 144
MS.gene010866.t1 MTR_7g033915 32.037 437 199 20 1 414 1 362 4.18e-38 142
MS.gene010866.t1 MTR_7g034115 34.853 373 199 16 1 359 1 343 4.36e-38 142
MS.gene010866.t1 MTR_6g040270 31.542 428 228 17 5 416 2 380 7.12e-38 142
MS.gene010866.t1 MTR_5g007410 30.282 426 229 15 12 415 27 406 3.35e-37 141
MS.gene010866.t1 MTR_3g105060 28.780 410 237 13 11 416 14 372 6.67e-37 139
MS.gene010866.t1 MTR_1g085120 31.643 414 236 14 11 414 92 468 1.21e-36 140
MS.gene010866.t1 MTR_1g108820 32.143 420 225 16 11 414 8 383 2.95e-36 137
MS.gene010866.t1 MTR_1g085120 31.643 414 236 14 11 414 167 543 4.43e-36 140
MS.gene010866.t1 MTR_6g045333 29.691 421 245 14 9 414 59 443 4.91e-36 138
MS.gene010866.t1 MTR_3g082890 28.235 425 217 12 1 359 1 403 5.07e-36 138
MS.gene010866.t1 MTR_7g056420 32.794 433 185 18 5 409 3 357 5.39e-36 141
MS.gene010866.t1 MTR_7g056430 32.794 433 185 18 5 409 3 357 5.40e-36 141
MS.gene010866.t1 MTR_5g058000 32.297 418 216 15 11 414 8 372 9.22e-36 136
MS.gene010866.t1 MTR_7g114710 31.860 430 208 16 2 416 4 363 1.01e-35 135
MS.gene010866.t1 MTR_6g022500 30.508 413 238 14 11 414 101 473 1.03e-35 137
MS.gene010866.t1 MTR_5g045510 30.549 419 221 12 11 417 12 372 1.65e-35 135
MS.gene010866.t1 MTR_6g011460 32.203 413 231 13 11 414 46 418 2.32e-35 135
MS.gene010866.t1 MTR_2g007530 31.640 433 160 16 11 419 19 339 5.01e-34 130
MS.gene010866.t1 MTR_4g039440 32.220 419 226 18 11 414 34 409 5.16e-34 132
MS.gene010866.t1 MTR_7g055943 31.667 420 230 13 11 414 40 418 1.90e-33 130
MS.gene010866.t1 MTR_3g108560 32.706 425 211 18 11 416 20 388 3.87e-33 129
MS.gene010866.t1 MTR_6g029350 41.304 230 94 9 191 414 1 195 4.69e-33 125
MS.gene010866.t1 MTR_7g075800 29.703 404 212 18 11 363 9 391 6.73e-33 132
MS.gene010866.t1 MTR_5g073370 32.055 365 208 13 8 359 2 339 1.09e-32 127
MS.gene010866.t1 MTR_7g034110 30.168 358 171 12 1 346 1 291 1.62e-31 124
MS.gene010866.t1 MTR_3g071850 29.412 425 235 16 9 411 22 403 2.53e-31 127
MS.gene010866.t1 MTR_1g066830 30.288 416 239 14 11 414 8 384 4.45e-31 123
MS.gene010866.t1 MTR_7g056287 29.684 411 238 13 11 414 3 369 5.99e-31 122
MS.gene010866.t1 MTR_7g056280 32.526 289 152 8 153 434 338 590 1.31e-30 124
MS.gene010866.t1 MTR_7g056280 35.676 185 100 6 12 190 7 178 2.60e-14 75.5
MS.gene010866.t1 MTR_7g056277 29.469 414 235 14 11 414 259 625 6.09e-30 123
MS.gene010866.t1 MTR_2g036470 29.478 441 235 16 2 416 5 395 8.24e-30 120
MS.gene010866.t1 MTR_7g007370 31.892 370 180 11 11 372 17 322 2.52e-29 117
MS.gene010866.t1 MTR_0009s0080 29.512 410 203 15 13 394 20 371 5.59e-29 118
MS.gene010866.t1 MTR_7g034090 48.734 158 61 5 11 163 4 146 5.77e-29 118
MS.gene010866.t1 MTR_7g034090 36.364 220 105 5 204 414 116 309 1.95e-27 114
MS.gene010866.t1 MTR_5g031970 29.384 422 216 15 3 416 8 355 5.88e-29 117
MS.gene010866.t1 MTR_5g084070 30.529 416 210 15 1 363 1 390 8.44e-29 117
MS.gene010866.t1 MTR_3g094980 49.612 129 41 2 277 404 26 131 1.35e-28 111
MS.gene010866.t1 MTR_7g034120 31.778 343 176 13 93 419 10 310 3.17e-28 114
MS.gene010866.t1 MTR_2g007090 36.296 270 112 11 154 414 73 291 5.38e-28 112
MS.gene010866.t1 MTR_5g061680 32.249 338 162 14 11 335 11 294 8.06e-28 113
MS.gene010866.t1 MTR_1g108800 31.884 414 190 16 11 414 8 339 9.45e-28 113
MS.gene010866.t1 MTR_7g060470 31.467 375 205 15 11 359 3 351 1.93e-27 113
MS.gene010866.t1 MTR_1g108820 33.013 312 175 11 11 307 8 300 3.14e-27 112
MS.gene010866.t1 MTR_5g039450 28.873 426 211 20 9 415 4 356 5.83e-27 111
MS.gene010866.t1 MTR_6g044560 28.160 451 230 14 1 414 168 561 4.54e-26 111
MS.gene010866.t1 MTR_1g085120 34.323 303 174 11 11 303 179 466 6.09e-26 110
MS.gene010866.t1 MTR_6g044572 27.828 442 223 14 11 414 2 385 1.03e-25 108
MS.gene010866.t1 MTR_7g056447 38.967 213 101 7 5 209 3 194 1.34e-25 106
MS.gene010866.t1 MTR_6g022360 32.527 372 210 15 11 373 43 382 3.56e-25 107
MS.gene010866.t1 MTR_5g073340 29.738 343 184 11 11 341 8 305 4.17e-25 105
MS.gene010866.t1 MTR_7g056020 30.046 436 212 18 11 423 16 381 1.99e-24 106
MS.gene010866.t1 MTR_3g467400 29.058 382 192 15 11 365 3 332 3.31e-24 103
MS.gene010866.t1 MTR_8g085430 34.661 251 133 8 1 237 1 234 3.53e-24 102
MS.gene010866.t1 MTR_3g108560 35.065 308 157 15 11 305 20 297 2.41e-23 100
MS.gene010866.t1 MTR_8g468810 27.696 473 236 19 11 414 25 460 3.45e-23 102
MS.gene010866.t1 MTR_8g014160 28.285 449 218 20 9 416 39 424 7.46e-23 100
MS.gene010866.t1 MTR_8g077460 27.338 417 242 14 8 414 7 372 3.31e-22 98.2
MS.gene010866.t1 MTR_6g022520 31.024 332 187 12 93 414 11 310 3.33e-22 97.1
MS.gene010866.t1 MTR_5g039470 28.451 355 208 14 27 363 1 327 4.29e-22 97.1
MS.gene010866.t1 MTR_8g014260 26.569 478 246 15 4 414 9 448 7.17e-22 97.8
MS.gene010866.t1 MTR_4g134150 34.146 205 106 8 11 210 14 194 7.83e-22 94.0
MS.gene010866.t1 MTR_5g013500 27.624 362 191 15 79 416 50 364 1.41e-21 96.3
MS.gene010866.t1 MTR_3g087260 31.190 311 157 12 1 302 1 263 1.43e-21 97.1
MS.gene010866.t1 MTR_3g087260 30.421 309 166 11 122 415 181 455 4.17e-18 86.7
MS.gene010866.t1 MTR_8g062310 27.615 478 235 21 1 419 5 430 1.66e-21 96.7
MS.gene010866.t1 MTR_7g021990 30.079 379 225 13 3 364 34 389 3.23e-21 95.9
MS.gene010866.t1 MTR_7g021950 30.079 379 225 13 3 364 34 389 6.97e-21 95.5
MS.gene010866.t1 MTR_3g110010 36.893 206 106 6 3 202 2 189 8.74e-21 95.9
MS.gene010866.t1 MTR_3g109982 36.715 207 107 6 3 203 2 190 9.11e-21 95.5
MS.gene010866.t1 MTR_3g109982 29.268 287 146 10 142 409 220 468 5.57e-17 84.0
MS.gene010866.t1 MTR_8g467800 27.848 474 239 16 11 419 20 455 1.21e-20 94.4
MS.gene010866.t1 MTR_3g450920 40.936 171 85 4 68 235 60 217 1.50e-20 90.5
MS.gene010866.t1 MTR_5g039490 27.804 428 219 16 11 418 20 377 1.88e-20 92.8
MS.gene010866.t1 MTR_5g012840 27.114 343 170 13 33 364 11 284 1.99e-20 92.0
MS.gene010866.t1 MTR_2g007610 37.736 159 73 3 257 414 15 148 2.89e-20 88.2
MS.gene010866.t1 MTR_4g032730 26.887 424 233 16 11 363 15 432 3.32e-20 93.2
MS.gene010866.t1 MTR_4g080610 26.804 388 218 12 1 376 1 334 3.83e-20 92.0
MS.gene010866.t1 MTR_8g468810 31.690 284 159 11 11 270 25 297 5.66e-20 90.9
MS.gene010866.t1 MTR_8g468810 31.690 284 159 11 11 270 25 297 5.89e-20 90.9
MS.gene010866.t1 MTR_8g468810 31.690 284 159 11 11 270 25 297 9.44e-20 90.5
MS.gene010866.t1 MTR_8g468810 31.690 284 159 11 11 270 25 297 1.03e-19 90.9
MS.gene010866.t1 MTR_8g058970 35.909 220 109 9 9 204 17 228 2.20e-19 90.5
MS.gene010866.t1 MTR_7g033945 37.306 193 86 9 1 179 1 172 5.16e-19 84.7
MS.gene010866.t1 MTR_7g022105 29.351 385 220 16 3 364 35 390 5.61e-19 89.0
MS.gene010866.t1 MTR_8g062270 26.793 474 239 19 11 414 16 451 1.19e-18 88.2
MS.gene010866.t1 MTR_5g063950 25.952 420 231 14 11 416 8 361 1.82e-18 87.0
MS.gene010866.t1 MTR_5g092960 25.551 454 243 13 11 385 19 456 2.36e-18 87.4
MS.gene010866.t1 MTR_8g445780 24.757 412 215 11 3 349 5 386 2.78e-18 86.7
MS.gene010866.t1 MTR_8g469020 27.664 488 240 25 11 423 7 456 3.02e-18 87.0
MS.gene010866.t1 MTR_5g080710 26.265 415 231 13 2 363 24 416 3.70e-18 87.0
MS.gene010866.t1 MTR_4g056020 27.778 414 219 14 9 359 7 403 4.91e-18 86.7
MS.gene010866.t1 MTR_8g058965 35.211 213 106 10 11 202 13 214 1.23e-17 85.1
MS.gene010866.t1 MTR_5g054920 31.604 212 111 8 188 386 2 192 1.30e-17 81.3
MS.gene010866.t1 MTR_3g114200 36.538 156 70 5 10 157 18 152 1.53e-17 80.1
MS.gene010866.t1 MTR_8g468760 27.273 440 252 17 11 414 9 416 2.85e-17 84.0
MS.gene010866.t1 MTR_4g056030 27.990 418 219 18 6 359 4 403 2.90e-17 84.3
MS.gene010866.t1 MTR_5g065100 26.185 401 223 15 16 412 13 344 4.18e-17 83.6
MS.gene010866.t1 MTR_1g014450 26.437 348 204 12 4 342 9 313 2.17e-16 81.3
MS.gene010866.t1 MTR_8g014290 35.714 154 88 5 11 156 10 160 1.33e-15 74.7
MS.gene010866.t1 MTR_7g023310 28.085 235 143 7 11 242 26 237 1.41e-15 79.0
MS.gene010866.t1 MTR_4g130200 26.024 415 207 13 11 383 20 376 1.58e-15 78.6
MS.gene010866.t1 MTR_1g492880 46.875 96 35 3 11 102 6 89 2.07e-15 72.0
MS.gene010866.t1 MTR_1g492880 41.441 111 49 3 11 117 6 104 3.52e-15 71.6
MS.gene010866.t1 MTR_8g070950 26.566 463 249 19 4 414 8 431 3.74e-15 77.4
MS.gene010866.t1 MTR_4g047950 32.663 199 110 6 1 190 1 184 4.47e-15 77.0
MS.gene010866.t1 MTR_8g062080 36.585 205 103 11 11 204 23 211 4.49e-15 77.4
MS.gene010866.t1 MTR_8g062010 33.171 205 118 10 1 200 1 191 4.72e-15 77.4
MS.gene010866.t1 MTR_8g468840 33.953 215 120 7 2 204 5 209 1.24e-14 75.9
MS.gene010866.t1 MTR_2g020180 31.884 138 72 4 267 398 91 212 1.68e-14 72.8
MS.gene010866.t1 MTR_2g083840 33.171 205 115 7 11 204 21 214 7.03e-14 73.6
MS.gene010866.t1 MTR_4g080787 28.571 231 143 7 11 232 19 236 7.50e-14 73.9
MS.gene010866.t1 MTR_5g087940 34.426 183 91 7 11 188 26 184 1.00e-13 72.8
MS.gene010866.t1 MTR_1g067190 31.410 156 88 4 3 157 7 144 1.09e-13 72.4
MS.gene010866.t1 MTR_7g033470 34.694 147 49 2 11 157 14 113 1.11e-13 68.6
MS.gene010866.t1 MTR_6g092430 27.895 190 112 5 4 183 3 177 2.14e-13 72.0
MS.gene010866.t1 MTR_2g072530 25.293 427 213 17 11 363 13 407 2.74e-13 72.0
MS.gene010866.t1 MTR_2g082800 32.995 197 107 8 4 192 20 199 3.72e-13 71.2
MS.gene010866.t1 MTR_5g021550 35.256 156 78 6 11 155 19 162 4.39e-13 67.4
MS.gene010866.t1 MTR_5g061410 28.431 306 167 13 11 306 5 268 4.59e-13 69.7
MS.gene010866.t1 MTR_7g033940 40.000 125 47 5 13 130 96 199 5.29e-13 68.6
MS.gene010866.t1 MTR_1377s0010 34.127 126 71 4 243 364 7 124 5.55e-13 66.2
MS.gene010866.t1 MTR_4g093690 30.198 202 113 6 11 202 18 201 5.79e-13 69.3
MS.gene010866.t1 MTR_4g080590 28.934 197 124 5 11 205 23 205 6.04e-13 70.5
MS.gene010866.t1 MTR_8g467790 34.300 207 104 12 11 202 148 337 6.23e-13 70.9
MS.gene010866.t1 MTR_4g080590 28.934 197 124 5 11 205 23 205 6.43e-13 70.9
MS.gene010866.t1 MTR_3g113782 50.794 63 25 1 1 57 1 63 6.69e-13 64.7
MS.gene010866.t1 MTR_3g095600 32.000 250 122 10 11 253 4 212 7.04e-13 69.3
MS.gene010866.t1 MTR_1g038710 24.882 422 227 15 9 359 17 419 8.87e-13 70.5
MS.gene010866.t1 MTR_7g081290 34.821 112 54 4 266 365 122 226 1.95e-12 67.4
MS.gene010866.t1 MTR_7g081290 61.702 47 18 0 11 57 18 64 5.29e-11 63.2
MS.gene010866.t1 MTR_2g082850 34.483 174 97 7 11 178 22 184 3.23e-12 68.2
MS.gene010866.t1 MTR_2g007100 68.182 44 14 0 11 54 2 45 3.31e-12 62.4
MS.gene010866.t1 MTR_3g036320 28.462 260 159 6 13 263 22 263 3.33e-12 68.2
MS.gene010866.t1 MTR_4g080773 29.851 201 127 6 11 202 19 214 5.73e-12 67.8
MS.gene010866.t1 MTR_4g080773 29.851 201 127 6 11 202 19 214 6.39e-12 67.8
MS.gene010866.t1 MTR_5g082930 45.679 81 34 1 13 93 17 87 6.46e-12 65.1
MS.gene010866.t1 MTR_1g013560 24.775 444 278 16 11 434 19 426 7.18e-12 67.4
MS.gene010866.t1 MTR_1g021825 25.084 299 179 8 11 303 88 347 8.88e-12 67.4
MS.gene010866.t1 MTR_3g048290 27.391 230 149 7 11 238 23 236 9.54e-12 67.0
MS.gene010866.t1 MTR_2g047848 28.837 215 125 7 6 208 2 200 9.57e-12 67.0
MS.gene010866.t1 MTR_1g021825 25.084 299 179 8 11 303 17 276 1.08e-11 66.6
MS.gene010866.t1 MTR_8g062300 30.876 217 114 9 11 204 26 229 1.26e-11 66.6
MS.gene010866.t1 MTR_7g098590 54.386 57 24 1 4 58 9 65 1.51e-11 62.4
MS.gene010866.t1 MTR_1g011410 28.643 199 130 5 11 208 315 502 1.66e-11 66.6
MS.gene010866.t1 MTR_5g073400 38.739 111 62 2 93 203 7 111 1.72e-11 62.0
MS.gene010866.t1 MTR_1g013630 24.516 310 202 10 11 305 39 331 1.81e-11 65.9
MS.gene010866.t1 MTR_3g023470 32.663 199 100 8 5 188 2 181 2.03e-11 65.9
MS.gene010866.t1 MTR_3g099900 27.848 237 121 9 11 230 18 221 2.03e-11 65.9
MS.gene010866.t1 MTR_2g099980 30.921 152 85 4 11 157 38 174 2.17e-11 65.9
MS.gene010866.t1 MTR_8g014180 72.973 37 10 0 11 47 17 53 2.53e-11 59.3
MS.gene010866.t1 MTR_1g013560 26.316 342 209 12 11 345 19 324 2.70e-11 65.1
MS.gene010866.t1 MTR_2g100590 30.275 218 138 8 11 223 42 250 2.78e-11 65.5
MS.gene010866.t1 MTR_4g050250 27.273 341 186 15 11 301 21 349 2.80e-11 65.5
MS.gene010866.t1 MTR_2g082880 35.955 178 82 7 11 179 10 164 2.97e-11 65.5
MS.gene010866.t1 MTR_2g100590 30.275 218 138 8 11 223 42 250 3.18e-11 65.5
MS.gene010866.t1 MTR_1g013580 26.887 212 131 7 11 212 19 216 4.22e-11 65.1
MS.gene010866.t1 MTR_5g005690 30.357 224 99 7 15 204 25 225 4.40e-11 65.1
MS.gene010866.t1 MTR_2g047858 27.861 201 125 5 11 204 115 302 6.53e-11 64.7
MS.gene010866.t1 MTR_2g100590 30.275 218 138 8 11 223 42 250 6.65e-11 64.7
MS.gene010866.t1 MTR_2g091145 30.151 199 126 8 11 204 21 211 7.44e-11 64.3
MS.gene010866.t1 MTR_4g057725 27.451 204 130 6 11 207 22 214 9.09e-11 63.9
MS.gene010866.t1 MTR_3g095630 27.854 219 103 7 225 433 16 189 9.43e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010866.t1 AT4G00160 29.471 397 216 11 11 359 16 396 6.29e-29 118
MS.gene010866.t1 AT3G52680 27.068 399 221 11 11 359 21 399 2.72e-25 108
MS.gene010866.t1 AT1G32375 25.877 456 248 14 11 414 2 419 4.73e-25 107
MS.gene010866.t1 AT1G32375 25.877 456 248 14 11 414 2 419 4.73e-25 107
MS.gene010866.t1 AT4G26340 27.431 401 226 12 11 364 2 384 2.90e-24 104
MS.gene010866.t1 AT4G14096 29.915 351 173 14 11 301 8 345 5.89e-24 104
MS.gene010866.t1 AT4G14096 29.915 351 173 14 11 301 8 345 5.89e-24 104
MS.gene010866.t1 AT4G26350 25.966 466 245 16 11 416 2 427 6.34e-24 103
MS.gene010866.t1 AT4G14103 37.255 204 111 8 11 209 8 199 9.17e-24 102
MS.gene010866.t1 AT4G14103 37.255 204 111 8 11 209 8 199 9.17e-24 102
MS.gene010866.t1 AT2G04230 27.750 400 226 10 11 359 13 400 9.31e-24 103
MS.gene010866.t1 AT2G26860 28.256 407 216 14 11 360 2 389 9.83e-24 102
MS.gene010866.t1 AT2G26860 28.256 407 216 14 11 360 2 389 9.83e-24 102
MS.gene010866.t1 AT4G14103 37.255 204 111 8 11 209 8 199 1.34e-23 103
MS.gene010866.t1 AT5G56370 28.508 449 246 17 11 415 2 419 2.33e-23 102
MS.gene010866.t1 AT5G56370 28.508 449 246 17 11 415 2 419 2.33e-23 102
MS.gene010866.t1 AT5G56420 26.932 453 245 17 11 415 6 420 3.54e-23 101
MS.gene010866.t1 AT5G56420 26.932 453 245 17 11 415 6 420 3.54e-23 101
MS.gene010866.t1 AT5G56420 26.932 453 245 17 11 415 6 420 3.54e-23 101
MS.gene010866.t1 AT1G78750 33.778 225 132 7 5 223 12 225 1.41e-22 100
MS.gene010866.t1 AT1G78750 33.778 225 132 7 5 223 12 225 1.41e-22 100
MS.gene010866.t1 AT5G56440 27.206 408 218 17 11 359 2 389 8.56e-22 97.4
MS.gene010866.t1 AT4G10400 26.637 443 248 14 11 414 2 406 1.75e-21 96.3
MS.gene010866.t1 AT4G10400 26.637 443 248 14 11 414 2 406 1.75e-21 96.3
MS.gene010866.t1 AT4G10400 26.637 443 248 14 11 414 2 406 1.75e-21 96.3
MS.gene010866.t1 AT3G60040 27.733 375 179 13 11 310 13 370 2.59e-21 97.1
MS.gene010866.t1 AT4G00315 28.087 413 219 16 11 359 2 400 2.77e-21 96.3
MS.gene010866.t1 AT3G60040 27.733 375 179 13 11 310 232 589 4.18e-21 97.1
MS.gene010866.t1 AT3G60040 27.733 375 179 13 11 310 233 590 4.37e-21 96.7
MS.gene010866.t1 AT3G60040 27.733 375 179 13 11 310 230 587 4.93e-21 96.3
MS.gene010866.t1 AT3G60040 27.733 375 179 13 11 310 232 589 5.88e-21 96.3
MS.gene010866.t1 AT1G55660 27.873 409 225 12 11 359 53 451 6.73e-21 95.5
MS.gene010866.t1 AT4G13965 26.087 391 230 10 11 359 10 383 2.69e-20 93.2
MS.gene010866.t1 AT1G16930 34.135 208 114 5 2 204 6 195 3.35e-20 93.2
MS.gene010866.t1 AT1G16930 34.135 208 114 5 2 204 6 195 3.35e-20 93.2
MS.gene010866.t1 AT1G16930 34.135 208 114 5 2 204 6 195 3.35e-20 93.2
MS.gene010866.t1 AT1G69630 31.818 198 120 3 11 206 18 202 1.13e-19 91.3
MS.gene010866.t1 AT4G13985 31.963 219 128 8 1 210 9 215 2.52e-19 90.5
MS.gene010866.t1 AT5G56820 26.667 450 247 15 11 416 15 425 5.13e-19 89.4
MS.gene010866.t1 AT3G59190 33.195 241 133 9 1 223 1 231 7.08e-19 88.6
MS.gene010866.t1 AT3G59190 33.195 241 133 10 1 223 1 231 1.08e-18 89.0
MS.gene010866.t1 AT5G56690 25.521 384 230 11 13 348 4 379 1.66e-18 87.4
MS.gene010866.t1 AT3G44060 34.500 200 106 6 16 206 4 187 2.89e-18 87.0
MS.gene010866.t1 AT1G78760 22.449 490 247 14 4 416 9 442 3.75e-18 87.0
MS.gene010866.t1 AT5G22610 27.612 402 222 16 11 363 18 399 3.85e-18 87.0
MS.gene010866.t1 AT2G42730 33.168 202 122 8 11 206 5 199 3.88e-18 87.0
MS.gene010866.t1 AT5G56370 29.794 339 175 12 11 307 2 319 5.35e-18 85.1
MS.gene010866.t1 AT3G58860 27.222 360 178 14 8 303 4 343 5.64e-18 86.3
MS.gene010866.t1 AT1G51370 32.812 192 110 4 11 202 19 191 5.68e-18 85.5
MS.gene010866.t1 AT3G51530 28.224 411 200 19 11 359 30 407 7.69e-18 85.9
MS.gene010866.t1 AT1G51370 32.812 192 110 4 11 202 19 191 8.05e-18 85.9
MS.gene010866.t1 AT1G51370 32.812 192 110 4 11 202 19 191 8.20e-18 85.5
MS.gene010866.t1 AT1G55660 32.735 223 137 5 11 229 53 266 8.87e-18 85.1
MS.gene010866.t1 AT3G50710 27.426 474 227 20 11 416 2 426 1.01e-17 85.5
MS.gene010866.t1 AT3G59200 33.649 211 115 9 11 211 7 202 2.78e-17 84.3
MS.gene010866.t1 AT3G59200 33.649 211 115 9 11 211 7 202 3.47e-17 83.2
MS.gene010866.t1 AT5G22730 30.457 197 119 4 11 204 28 209 5.04e-17 83.6
MS.gene010866.t1 AT5G22730 30.457 197 119 4 11 204 28 209 5.04e-17 83.6
MS.gene010866.t1 AT5G22730 33.000 200 110 6 11 204 28 209 5.25e-17 82.8
MS.gene010866.t1 AT1G66310 28.713 202 130 3 3 204 11 198 6.20e-17 83.2
MS.gene010866.t1 AT1G16940 25.416 421 218 17 1 365 1 381 6.53e-17 82.8
MS.gene010866.t1 AT1G06630 28.099 363 180 14 11 309 21 366 7.98e-17 82.4
MS.gene010866.t1 AT1G06630 28.099 363 180 14 11 309 12 357 8.51e-17 82.4
MS.gene010866.t1 AT1G06630 28.099 363 180 14 11 309 12 357 8.51e-17 82.4
MS.gene010866.t1 AT1G06630 28.099 363 180 14 11 309 12 357 8.51e-17 82.4
MS.gene010866.t1 AT1G06630 28.099 363 180 14 11 309 12 357 8.51e-17 82.4
MS.gene010866.t1 AT1G06630 27.913 369 173 14 11 309 12 357 9.80e-17 82.8
MS.gene010866.t1 AT1G06630 28.198 344 188 13 11 301 12 349 1.13e-16 81.6
MS.gene010866.t1 AT1G06630 28.198 344 188 13 11 301 12 349 1.13e-16 81.6
MS.gene010866.t1 AT1G58310 32.420 219 124 7 8 209 5 216 1.25e-16 82.4
MS.gene010866.t1 AT5G22720 30.693 202 119 6 6 202 18 203 1.45e-16 82.0
MS.gene010866.t1 AT5G22610 32.864 213 116 8 11 213 18 213 1.52e-16 82.0
MS.gene010866.t1 AT4G15060 26.243 362 194 11 11 312 26 374 1.71e-16 81.6
MS.gene010866.t1 AT2G42720 30.990 313 167 13 11 312 2 276 1.88e-16 81.6
MS.gene010866.t1 AT5G44940 28.267 375 210 15 10 363 4 340 2.13e-16 80.9
MS.gene010866.t1 AT5G44490 31.000 200 121 6 9 204 15 201 2.47e-16 81.6
MS.gene010866.t1 AT5G44490 31.000 200 121 6 9 204 15 201 3.41e-16 80.9
MS.gene010866.t1 AT3G44810 34.171 199 119 6 16 209 12 203 3.53e-16 80.9
MS.gene010866.t1 AT3G52680 25.872 344 186 10 11 305 21 344 4.88e-16 79.7
MS.gene010866.t1 AT1G60410 27.822 381 191 15 11 330 10 367 8.81e-16 79.3
MS.gene010866.t1 AT1G48400 35.484 217 117 9 1 209 1 202 1.01e-15 79.7
MS.gene010866.t1 AT1G48400 35.484 217 117 9 1 209 1 202 1.08e-15 79.7
MS.gene010866.t1 AT5G22670 33.333 210 113 7 1 204 1 189 1.13e-15 79.3
MS.gene010866.t1 AT4G10420 29.283 321 150 14 142 414 28 319 1.30e-15 77.8
MS.gene010866.t1 AT5G56380 34.450 209 116 6 11 211 2 197 1.34e-15 79.0
MS.gene010866.t1 AT5G56380 34.450 209 116 6 11 211 2 197 1.34e-15 79.0
MS.gene010866.t1 AT3G58900 28.647 377 179 15 11 310 2 365 1.64e-15 79.0
MS.gene010866.t1 AT1G06630 33.019 212 109 7 11 206 12 206 1.74e-15 77.4
MS.gene010866.t1 AT2G26030 29.412 289 164 14 11 287 4 264 1.77e-15 78.6
MS.gene010866.t1 AT2G26030 29.412 289 164 14 11 287 4 264 1.77e-15 78.6
MS.gene010866.t1 AT4G22280 29.692 357 155 16 11 301 2 328 1.95e-15 77.4
MS.gene010866.t1 AT1G78840 34.826 201 102 6 11 205 5 182 2.11e-15 78.6
MS.gene010866.t1 AT1G78840 34.826 201 102 6 11 205 5 182 2.11e-15 78.6
MS.gene010866.t1 AT4G22280 29.235 366 164 16 11 311 2 337 2.13e-15 78.2
MS.gene010866.t1 AT1G80470 33.166 199 112 5 11 204 15 197 2.22e-15 78.6
MS.gene010866.t1 AT2G26030 29.412 289 164 14 11 287 4 264 2.28e-15 78.2
MS.gene010866.t1 AT5G18770 33.005 203 116 6 8 204 21 209 3.17e-15 78.2
MS.gene010866.t1 AT5G18770 33.005 203 116 6 8 204 21 209 3.82e-15 77.0
MS.gene010866.t1 AT4G15060 31.441 229 137 7 8 229 169 384 4.03e-15 77.8
MS.gene010866.t1 AT3G42770 34.653 202 105 7 16 204 4 191 4.15e-15 77.8
MS.gene010866.t1 AT5G02920 32.683 205 111 8 7 208 24 204 4.53e-15 75.5
MS.gene010866.t1 AT3G59210 33.010 206 119 8 11 209 7 200 5.78e-15 77.4
MS.gene010866.t1 AT3G59210 33.010 206 119 8 11 209 7 200 5.78e-15 77.4
MS.gene010866.t1 AT3G59210 33.010 206 119 8 11 209 7 200 5.78e-15 77.4
MS.gene010866.t1 AT3G59210 33.010 206 119 8 11 209 7 200 5.78e-15 77.4
MS.gene010866.t1 AT3G59210 33.010 206 119 8 11 209 7 200 5.78e-15 77.4
MS.gene010866.t1 AT3G26920 26.948 308 176 9 127 416 24 300 7.29e-15 75.5
MS.gene010866.t1 AT3G28410 31.373 204 102 9 11 205 28 202 8.25e-15 76.6
MS.gene010866.t1 AT5G02700 31.944 216 106 10 2 205 15 201 1.15e-14 76.3
MS.gene010866.t1 AT4G09920 25.212 353 208 12 11 346 2 315 1.19e-14 75.1
MS.gene010866.t1 AT4G09920 25.212 353 208 12 11 346 2 315 1.19e-14 75.1
MS.gene010866.t1 AT5G53635 31.841 201 109 6 12 204 1 181 1.26e-14 75.9
MS.gene010866.t1 AT3G59230 30.097 206 118 8 11 202 12 205 2.04e-14 75.5
MS.gene010866.t1 AT3G58880 27.174 368 180 14 11 306 3 354 3.32e-14 74.7
MS.gene010866.t1 AT5G53840 32.500 200 103 5 13 204 20 195 3.54e-14 74.7
MS.gene010866.t1 AT5G25860 27.273 231 128 7 1 207 1 215 4.29e-14 74.3
MS.gene010866.t1 AT5G56810 27.737 411 214 18 11 364 15 399 4.44e-14 74.3
MS.gene010866.t1 AT5G27750 30.806 211 111 8 10 204 4 195 5.61e-14 73.9
MS.gene010866.t1 AT5G27750 30.806 211 111 8 10 204 4 195 8.41e-14 73.2
MS.gene010866.t1 AT5G56400 25.980 408 215 17 11 359 33 412 8.45e-14 73.6
MS.gene010866.t1 AT4G09920 30.653 199 117 5 11 204 2 184 1.17e-13 71.6
MS.gene010866.t1 AT4G09920 30.653 199 117 5 11 204 2 184 1.17e-13 71.6
MS.gene010866.t1 AT4G09920 30.653 199 117 5 11 204 2 184 1.17e-13 71.6
MS.gene010866.t1 AT5G44950 34.314 204 102 9 11 204 4 185 1.38e-13 72.8
MS.gene010866.t1 AT1G78730 29.952 207 111 5 2 206 11 185 1.42e-13 72.8
MS.gene010866.t1 AT1G66320 27.513 189 123 4 15 203 34 208 1.45e-13 72.8
MS.gene010866.t1 AT5G22660 30.000 210 122 6 1 204 1 191 1.67e-13 72.4
MS.gene010866.t1 AT4G27050 29.187 209 124 6 11 204 4 203 1.67e-13 72.8
MS.gene010866.t1 AT4G27050 29.187 209 124 6 11 204 4 203 1.67e-13 72.8
MS.gene010866.t1 AT4G27050 29.187 209 124 6 11 204 4 203 1.67e-13 72.8
MS.gene010866.t1 AT4G27050 29.187 209 124 6 11 204 4 203 1.67e-13 72.8
MS.gene010866.t1 AT4G27050 29.187 209 124 6 11 204 4 203 1.67e-13 72.8
MS.gene010866.t1 AT5G53640 29.353 201 119 5 7 204 18 198 1.73e-13 70.1
MS.gene010866.t1 AT5G22660 30.000 210 122 6 1 204 1 191 2.36e-13 71.2
MS.gene010866.t1 AT3G58930 32.889 225 110 10 11 213 2 207 2.45e-13 72.0
MS.gene010866.t1 AT3G58930 32.889 225 110 10 11 213 2 207 2.45e-13 72.0
MS.gene010866.t1 AT3G58930 32.889 225 110 10 11 213 2 207 2.45e-13 72.0
MS.gene010866.t1 AT5G18780 32.057 209 121 7 1 206 1 191 3.06e-13 71.6
MS.gene010866.t1 AT5G18780 32.057 209 121 7 1 206 1 191 3.06e-13 71.6
MS.gene010866.t1 AT5G18780 32.057 209 121 7 1 206 1 191 3.78e-13 71.2
MS.gene010866.t1 AT5G18780 32.057 209 121 7 1 206 1 191 3.78e-13 71.2
MS.gene010866.t1 AT3G58940 27.887 355 167 17 11 299 2 333 4.33e-13 71.6
MS.gene010866.t1 AT3G58940 27.887 355 167 17 11 299 2 333 4.33e-13 71.6
MS.gene010866.t1 AT1G66290 29.293 198 115 6 11 204 29 205 4.35e-13 71.2
MS.gene010866.t1 AT3G58900 35.294 204 111 8 11 206 2 192 4.79e-13 70.1
MS.gene010866.t1 AT3G59240 27.230 213 140 6 11 218 8 210 5.30e-13 71.2
MS.gene010866.t1 AT5G41840 32.420 219 109 10 11 207 14 215 5.93e-13 71.2
MS.gene010866.t1 AT3G03040 31.401 207 124 5 11 209 2 198 6.32e-13 70.9
MS.gene010866.t1 AT3G58900 35.294 204 111 8 11 206 2 192 7.03e-13 69.7
MS.gene010866.t1 AT3G58900 35.294 204 111 8 11 206 2 192 7.03e-13 69.7
MS.gene010866.t1 AT1G66300 25.962 208 130 5 2 204 20 208 8.20e-13 70.5
MS.gene010866.t1 AT5G56560 30.846 201 109 7 13 205 7 185 1.37e-12 69.7
MS.gene010866.t1 AT3G26922 30.973 226 127 8 11 232 14 214 1.76e-12 68.6
MS.gene010866.t1 AT3G26922 30.973 226 127 8 11 232 14 214 1.76e-12 68.6
MS.gene010866.t1 AT5G56560 30.846 201 109 7 13 205 7 185 2.96e-12 68.9
MS.gene010866.t1 AT3G56780 29.412 204 119 5 6 204 2 185 3.13e-12 68.9
MS.gene010866.t1 AT5G38392 30.732 205 117 8 11 202 2 194 4.51e-12 65.9
MS.gene010866.t1 AT3G56780 29.412 204 119 5 6 204 2 185 5.04e-12 67.8
MS.gene010866.t1 AT5G44980 34.826 201 108 8 11 204 4 188 5.06e-12 67.8
MS.gene010866.t1 AT5G44980 34.826 201 108 8 11 204 4 188 5.06e-12 67.8
MS.gene010866.t1 AT5G44980 34.826 201 108 8 11 204 4 188 5.64e-12 67.0
MS.gene010866.t1 AT5G44980 34.826 201 108 8 11 204 4 188 5.64e-12 67.0
MS.gene010866.t1 AT3G56780 29.412 204 119 5 6 204 2 185 6.45e-12 67.4
MS.gene010866.t1 AT1G21990 31.429 210 115 7 1 202 1 189 7.11e-12 67.4
MS.gene010866.t1 AT5G41830 31.280 211 121 8 11 207 13 213 9.23e-12 67.4
MS.gene010866.t1 AT3G03030 31.401 207 125 5 11 209 2 199 9.65e-12 67.0
MS.gene010866.t1 AT1G05080 25.558 403 231 14 11 359 13 400 9.99e-12 67.0
MS.gene010866.t1 AT3G03030 31.429 210 121 6 11 209 2 199 1.26e-11 66.2
MS.gene010866.t1 AT3G49150 29.902 204 127 7 9 207 14 206 1.85e-11 66.2
MS.gene010866.t1 AT5G50270 26.570 414 224 17 11 366 2 393 1.90e-11 65.9
MS.gene010866.t1 AT5G56410 25.459 436 246 16 18 388 10 431 2.44e-11 65.9
MS.gene010866.t1 AT1G64540 34.158 202 95 10 11 204 5 176 2.84e-11 65.5
MS.gene010866.t1 AT1G64540 34.158 202 95 10 11 204 5 176 2.84e-11 65.5
MS.gene010866.t1 AT3G44080 27.329 322 185 12 16 315 12 306 3.62e-11 65.1
MS.gene010866.t1 AT2G29930 31.163 215 116 9 1 206 1 192 4.18e-11 65.1
MS.gene010866.t1 AT2G29930 31.163 215 116 9 1 206 1 192 4.18e-11 65.1
MS.gene010866.t1 AT5G03100 26.866 201 124 4 4 204 2 179 4.47e-11 64.3
MS.gene010866.t1 AT5G03100 26.866 201 124 4 4 204 2 179 4.47e-11 64.3
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 29 213 4.48e-11 64.7
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.52e-11 64.7
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.52e-11 64.7
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.52e-11 64.7
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.52e-11 64.7
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.96e-11 64.3
MS.gene010866.t1 AT2G29910 28.708 209 116 7 11 210 5 189 4.96e-11 64.3
MS.gene010866.t1 AT3G44090 29.703 202 115 5 16 207 29 213 5.32e-11 64.7
MS.gene010866.t1 AT3G49020 33.175 211 119 7 11 217 22 214 6.61e-11 64.3
MS.gene010866.t1 AT1G60400 33.824 204 105 7 11 204 14 197 7.12e-11 64.3
MS.gene010866.t1 AT4G00320 29.167 216 119 8 11 207 13 213 7.68e-11 64.3
MS.gene010866.t1 AT3G58960 25.118 211 136 6 11 214 2 197 7.83e-11 64.3
MS.gene010866.t1 AT3G58920 29.018 224 129 9 11 218 2 211 8.39e-11 64.3

Find 91 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTCGTTAAACCTAAAA+AGG 0.159796 7.1:+53489972 None:intergenic
ACAAACCTGCGAACTTTATC+TGG 0.171714 7.1:+53487688 None:intergenic
TTCACTCTATCAACTCTAAT+TGG 0.228909 7.1:-53488205 MS.gene010866:CDS
ACACTAAATCTTGATCATTT+AGG 0.244078 7.1:+53489648 None:intergenic
GAAAATATGTCCAGAAAATC+TGG 0.256006 7.1:-53488017 MS.gene010866:CDS
CTGCTAGCATTCTTAGTTGT+AGG 0.268174 7.1:-53489769 MS.gene010866:CDS
AGGCACTGCGGAACCAATTT+CGG 0.271599 7.1:+53487988 None:intergenic
GGCACTGCGGAACCAATTTC+GGG 0.294484 7.1:+53487989 None:intergenic
ATATGTAAATCTTCAAGAAT+TGG 0.312602 7.1:+53489608 None:intergenic
AATTTACCAGATACCATTCT+AGG 0.313035 7.1:-53490154 MS.gene010866:CDS
AATCTGGGTGGACCCGAAAT+TGG 0.315137 7.1:-53488001 MS.gene010866:CDS
TTCCACCTCAAGGTTGGATA+TGG 0.319497 7.1:-53489911 MS.gene010866:CDS
AAAGTAAAGCATTTGTGCTT+TGG 0.334178 7.1:+53489505 None:intergenic
GCTAGTGGCAACAACCTCTT+TGG 0.372407 7.1:+53490108 None:intergenic
ATGAACAAACTTCTAAATAA+AGG 0.376198 7.1:+53489672 None:intergenic
TTGGGAGAAAAGAGAGAATA+TGG 0.376589 7.1:+53490131 None:intergenic
TCAGAACTTCTTAGGCCAAC+AGG 0.377653 7.1:-53487869 MS.gene010866:CDS
TCAGAACTTCTTAGGCCAAC+AGG 0.377653 7.1:-53487938 MS.gene010866:CDS
GAATTACGACCCGATCGAAT+TGG 0.379320 7.1:-53490008 MS.gene010866:CDS
CCCTCTGTTGTCTTTGCCGT+TGG 0.389736 7.1:+53490030 None:intergenic
GCATTCCCAGTGTGGTCAAA+TGG 0.395491 7.1:-53489865 MS.gene010866:CDS
TTGTCTTGGTGAACAAGTAT+AGG 0.396673 7.1:-53487644 None:intergenic
GATTTAGTGTTGCTTCTAGT+TGG 0.411307 7.1:-53489635 MS.gene010866:CDS
ATAAGCTTTCACACTCTTGA+AGG 0.415041 7.1:+53489549 None:intergenic
CTTGAGGTGGAAACTCTTGA+TGG 0.421122 7.1:+53489922 None:intergenic
GATAAAGTTCGCAGGTTTGT+TGG 0.436388 7.1:-53487685 MS.gene010866:CDS
ATATGGCCTAGAATGGTATC+TGG 0.439179 7.1:+53490148 None:intergenic
ACTATACATAGAACTAAATC+AGG 0.456804 7.1:-53489441 MS.gene010866:intron
ATGATAATCTGTGGTGCTAA+AGG 0.459754 7.1:-53487793 MS.gene010866:CDS
CGAAGAGATGGAGGCATCAA+TGG 0.465005 7.1:-53490078 MS.gene010866:CDS
CATTCCCAGTGTGGTCAAAT+GGG 0.469316 7.1:-53489864 MS.gene010866:CDS
TGGCAACAACCTCTTTGGTT+GGG 0.474325 7.1:+53490113 None:intergenic
CTTGTTTGCCATGTTTGTGA+AGG 0.496241 7.1:-53489729 MS.gene010866:CDS
TTGAAGGGTAAAAGAGTACT+TGG 0.496698 7.1:+53489565 None:intergenic
GTGGCAACAACCTCTTTGGT+TGG 0.498149 7.1:+53490112 None:intergenic
CATCAAGAGTTTCCACCTCA+AGG 0.500087 7.1:-53489921 MS.gene010866:CDS
GGAATCTAGCTTGAACAAAA+CGG 0.502084 7.1:+53489943 None:intergenic
TCAAAACCTTGAGCTGGATG+AGG 0.502341 7.1:-53488144 MS.gene010866:intron
TTTAGCACCACAGATTATCA+TGG 0.505123 7.1:+53487795 None:intergenic
GAGAATTATCGTTATGTCCA+AGG 0.511527 7.1:-53487756 MS.gene010866:CDS
AAGAGTTTCCACCTCAAGGT+TGG 0.517707 7.1:-53489917 MS.gene010866:CDS
GATCGTCATGAAATTTGTCT+TGG 0.518898 7.1:-53487658 MS.gene010866:CDS
AGAGAGAATATGGCCTAGAA+TGG 0.527418 7.1:+53490141 None:intergenic
CAACTTAGTCAAATTATGAA+AGG 0.528567 7.1:+53488232 None:intergenic
CAAACCTGCGAACTTTATCT+GGG 0.532633 7.1:+53487689 None:intergenic
TCACATGCAGGAGAGGCCCT+TGG 0.533974 7.1:+53487739 None:intergenic
TAAGCTTCAAAACCTTGAGC+TGG 0.538687 7.1:-53488150 MS.gene010866:CDS
TATTCATCATCCAATTCGAT+CGG 0.541608 7.1:+53489998 None:intergenic
CTAGCGTCCTATCGAAGAGA+TGG 0.541728 7.1:-53490090 MS.gene010866:CDS
TTAGTCAAATTATGAAAGGT+AGG 0.542842 7.1:+53488236 None:intergenic
ATTCATCATCCAATTCGATC+GGG 0.546581 7.1:+53489999 None:intergenic
TGACCACACTGGGAATGCTA+CGG 0.548803 7.1:+53489870 None:intergenic
TTGTTTGCCATGTTTGTGAA+GGG 0.553869 7.1:-53489728 MS.gene010866:CDS
TCAACCCATTTGACCACACT+GGG 0.554090 7.1:+53489860 None:intergenic
GTTAGTATAAGTTCACATGC+AGG 0.566475 7.1:+53487727 None:intergenic
TAAGCTTTCACACTCTTGAA+GGG 0.567141 7.1:+53489550 None:intergenic
AACAAACCTCATCCAGCTCA+AGG 0.572084 7.1:+53488138 None:intergenic
TTGACATAAGCTCGCCCTGT+TGG 0.574005 7.1:+53487854 None:intergenic
TTGACATAAGCTCGCCCTGT+TGG 0.574005 7.1:+53487923 None:intergenic
CAATACCATGTTGCACAACA+TGG 0.574646 7.1:+53489837 None:intergenic
AAAATATGTCCAGAAAATCT+GGG 0.575083 7.1:-53488016 MS.gene010866:CDS
GTCAACCCATTTGACCACAC+TGG 0.581562 7.1:+53489859 None:intergenic
CTTGATATCAACTTAACCAA+CGG 0.582550 7.1:-53490046 MS.gene010866:CDS
TACCATATCCAACCTTGAGG+TGG 0.584067 7.1:+53489909 None:intergenic
CAGAACTTCTTAGGCCAACA+GGG 0.589293 7.1:-53487868 MS.gene010866:CDS
CAGAACTTCTTAGGCCAACA+GGG 0.589293 7.1:-53487937 MS.gene010866:CDS
GATGCCTCCATCTCTTCGAT+AGG 0.594567 7.1:+53490083 None:intergenic
CAACATGGTATTGAGAGCCT+TGG 0.598576 7.1:-53489827 MS.gene010866:CDS
CTACAACTAAGAATGCTAGC+AGG 0.599304 7.1:+53489770 None:intergenic
AGAATTATCGTTATGTCCAA+GGG 0.599476 7.1:-53487755 MS.gene010866:CDS
TCTCCCCAGATAAAGTTCGC+AGG 0.605853 7.1:-53487693 MS.gene010866:CDS
TATAAGTTCACATGCAGGAG+AGG 0.608330 7.1:+53487732 None:intergenic
GCATTGTGAAGTGCTTTCAA+CGG 0.610515 7.1:+53489470 None:intergenic
GGGTAAAAGAGTACTTGGAG+TGG 0.620807 7.1:+53489570 None:intergenic
ACCAACGGCAAAGACAACAG+AGG 0.626712 7.1:-53490031 MS.gene010866:CDS
CCAACGGCAAAGACAACAGA+GGG 0.630942 7.1:-53490030 MS.gene010866:CDS
GCGTCCTATCGAAGAGATGG+AGG 0.636910 7.1:-53490087 MS.gene010866:CDS
TGTCATCAAGAAGAACAAGA+AGG 0.638376 7.1:-53490195 MS.gene010866:CDS
TCTCTTCGATAGGACGCTAG+TGG 0.659918 7.1:+53490093 None:intergenic
GTTGACCATGTTGTGCAACA+TGG 0.661674 7.1:-53489842 MS.gene010866:CDS
CAAACAAGTTGAGAACAACA+AGG 0.663917 7.1:+53489744 None:intergenic
CATCAAGAAGAACAAGAAGG+AGG 0.667905 7.1:-53490192 MS.gene010866:CDS
AAACCGTAGCATTCCCAGTG+TGG 0.678828 7.1:-53489873 MS.gene010866:CDS
TAGTGAAAAGAGTGAGACCA+AGG 0.682227 7.1:+53489810 None:intergenic
GTTGAAAGCACTTCACAATG+CGG 0.685027 7.1:-53489468 MS.gene010866:CDS
AATTACCATATCCAACCTTG+AGG 0.697138 7.1:+53489906 None:intergenic
AAACAAGTTGAGAACAACAA+GGG 0.705517 7.1:+53489745 None:intergenic
AAACCTGCGAACTTTATCTG+GGG 0.707100 7.1:+53487690 None:intergenic
TTGCAAACCATGATAATCTG+TGG 0.707485 7.1:-53487802 MS.gene010866:CDS
ATATGTCCAGAAAATCTGGG+TGG 0.713299 7.1:-53488013 MS.gene010866:CDS
AGGTGTAGTGGAAGGCACTG+CGG 0.725259 7.1:+53487976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTTAATGATAAATAATA+TGG + chr7.1:53489462-53489481 None:intergenic 10.0%
!! ATAACTTTATAAATTAAATG+AGG + chr7.1:53488686-53488705 None:intergenic 10.0%
!! ATTATTTATCATTAAATCTA+AGG - chr7.1:53489463-53489482 MS.gene010866:CDS 10.0%
!! TAATTCTATCTATATTAATA+GGG - chr7.1:53489781-53489800 MS.gene010866:CDS 10.0%
!! TTAATTCTATCTATATTAAT+AGG - chr7.1:53489780-53489799 MS.gene010866:CDS 10.0%
!! AATATATACAGTCAAAAATA+AGG + chr7.1:53488525-53488544 None:intergenic 15.0%
!! TATAAATTAAATGAGGAAAA+GGG + chr7.1:53488679-53488698 None:intergenic 15.0%
!! TTAATGATAAATAATATGGA+CGG + chr7.1:53489458-53489477 None:intergenic 15.0%
!! TTATAAATTAAATGAGGAAA+AGG + chr7.1:53488680-53488699 None:intergenic 15.0%
!!! AATCATCTTAAATTATTTCT+GGG + chr7.1:53488820-53488839 None:intergenic 15.0%
!! ATATGTAAATCTTCAAGAAT+TGG + chr7.1:53488236-53488255 None:intergenic 20.0%
!! ATGAACAAACTTCTAAATAA+AGG + chr7.1:53488172-53488191 None:intergenic 20.0%
!! CGATATATCTAAAAAAAACA+AGG + chr7.1:53489569-53489588 None:intergenic 20.0%
!! GAAAACAAACATAGAAATAT+AGG + chr7.1:53489547-53489566 None:intergenic 20.0%
!! GAATCATCTTAAATTATTTC+TGG + chr7.1:53488821-53488840 None:intergenic 20.0%
!! TTATAATATGCCAACTAAAT+CGG + chr7.1:53489157-53489176 None:intergenic 20.0%
!!! AATATAGGCAAATTTTAAGT+TGG + chr7.1:53489532-53489551 None:intergenic 20.0%
!!! CTAAATTTTGTTTGTATTGT+TGG + chr7.1:53489098-53489117 None:intergenic 20.0%
!!! CTCTAATTTTAAAACCAAAA+TGG - chr7.1:53489130-53489149 MS.gene010866:intron 20.0%
!!! TTCTAAATAAAGGATTTTGA+GGG + chr7.1:53488162-53488181 None:intergenic 20.0%
!!! TTTGACTGTATATATTTCTA+GGG - chr7.1:53488529-53488548 MS.gene010866:intron 20.0%
!!! TTTTATTCAACTTATACATC+AGG - chr7.1:53489412-53489431 MS.gene010866:intron 20.0%
!!! TTTTGACTGTATATATTTCT+AGG - chr7.1:53488528-53488547 MS.gene010866:intron 20.0%
! AAAATATGTCCAGAAAATCT+GGG - chr7.1:53489825-53489844 MS.gene010866:CDS 25.0%
! AAACTCGTTAAACCTAAAAA+GGG + chr7.1:53487871-53487890 None:intergenic 25.0%
! AAGATTTCCATTGAATTTCA+TGG + chr7.1:53488961-53488980 None:intergenic 25.0%
! ACACTAAATCTTGATCATTT+AGG + chr7.1:53488196-53488215 None:intergenic 25.0%
! ACTATACATAGAACTAAATC+AGG - chr7.1:53488400-53488419 MS.gene010866:intron 25.0%
! AGATTTCCATTGAATTTCAT+GGG + chr7.1:53488960-53488979 None:intergenic 25.0%
! AGGTATTATAACATGGATTT+GGG - chr7.1:53489250-53489269 MS.gene010866:intron 25.0%
! ATCTTAAAATCAAACCCAAT+TGG - chr7.1:53489001-53489020 MS.gene010866:intron 25.0%
! CAACTTAGTCAAATTATGAA+AGG + chr7.1:53489612-53489631 None:intergenic 25.0%
! TATAATATGCCAACTAAATC+GGG + chr7.1:53489156-53489175 None:intergenic 25.0%
! TTAATACCCATGAAATTCAA+TGG - chr7.1:53488951-53488970 MS.gene010866:intron 25.0%
! TTAGTCAAATTATGAAAGGT+AGG + chr7.1:53489608-53489627 None:intergenic 25.0%
!! AAGGTATTATAACATGGATT+TGG - chr7.1:53489249-53489268 MS.gene010866:intron 25.0%
!! ATATTTCTACCAAACCAATT+GGG + chr7.1:53489018-53489037 None:intergenic 25.0%
!! ATGATGAATATACCCTTTTT+AGG - chr7.1:53487856-53487875 MS.gene010866:CDS 25.0%
!! ATTTTCTGGACATATTTTCT+TGG + chr7.1:53489823-53489842 None:intergenic 25.0%
!! CTTCTAAATAAAGGATTTTG+AGG + chr7.1:53488163-53488182 None:intergenic 25.0%
!! TATATTTCTACCAAACCAAT+TGG + chr7.1:53489019-53489038 None:intergenic 25.0%
!!! TTTTGCAAGGTATTATAACA+TGG - chr7.1:53489243-53489262 MS.gene010866:intron 25.0%
AAAATCAAACCCAATTGGTT+TGG - chr7.1:53489006-53489025 MS.gene010866:intron 30.0%
AATTTACCAGATACCATTCT+AGG - chr7.1:53487687-53487706 MS.gene010866:CDS 30.0%
AGAATTATCGTTATGTCCAA+GGG - chr7.1:53490086-53490105 MS.gene010866:CDS 30.0%
ATCTCATGATATCTGTAAGT+TGG + chr7.1:53488722-53488741 None:intergenic 30.0%
ATCTTGTGAACATGTAATTC+TGG + chr7.1:53489349-53489368 None:intergenic 30.0%
CAAACTCGTTAAACCTAAAA+AGG + chr7.1:53487872-53487891 None:intergenic 30.0%
CTTGATATCAACTTAACCAA+CGG - chr7.1:53487795-53487814 MS.gene010866:CDS 30.0%
GAAAATATGTCCAGAAAATC+TGG - chr7.1:53489824-53489843 MS.gene010866:CDS 30.0%
TATTCATCATCCAATTCGAT+CGG + chr7.1:53487846-53487865 None:intergenic 30.0%
TCTTGTGAACATGTAATTCT+GGG + chr7.1:53489348-53489367 None:intergenic 30.0%
TTCACTCTATCAACTCTAAT+TGG - chr7.1:53489636-53489655 MS.gene010866:CDS 30.0%
TTGCTATATGAATACACCAA+TGG - chr7.1:53488437-53488456 MS.gene010866:intron 30.0%
! AAACAAGTTGAGAACAACAA+GGG + chr7.1:53488099-53488118 None:intergenic 30.0%
! AAAGTAAAGCATTTGTGCTT+TGG + chr7.1:53488339-53488358 None:intergenic 30.0%
! ACAGATATCATGAGATTTTG+AGG - chr7.1:53488726-53488745 MS.gene010866:intron 30.0%
! ATCTTTTATTCCATCACCAT+TGG + chr7.1:53488456-53488475 None:intergenic 30.0%
! TCTGAAAAATGCAAGTTTTG+AGG + chr7.1:53489888-53489907 None:intergenic 30.0%
!! AAATAAAGGATTTTGAGGGA+GGG + chr7.1:53488158-53488177 None:intergenic 30.0%
!! GATGAGGTTTGTTAAGTTTA+GGG - chr7.1:53489713-53489732 MS.gene010866:CDS 30.0%
!! TAAATAAAGGATTTTGAGGG+AGG + chr7.1:53488159-53488178 None:intergenic 30.0%
!! TGCATTTTTCAGAACTTCTT+AGG - chr7.1:53489895-53489914 MS.gene010866:CDS 30.0%
AACTTGGACCAGTTAAAAAC+TGG + chr7.1:53489489-53489508 None:intergenic 35.0%
AATATTGATGTGGAGCAGAA+GGG - chr7.1:53489300-53489319 MS.gene010866:intron 35.0%
AATTACCATATCCAACCTTG+AGG + chr7.1:53487938-53487957 None:intergenic 35.0%
ACTTGGACCAAAACATAAAC+TGG + chr7.1:53488570-53488589 None:intergenic 35.0%
AGAAAAACCCTTCACAAACA+TGG + chr7.1:53488123-53488142 None:intergenic 35.0%
AGAAAGTGAAGTCATGAAAC+AGG - chr7.1:53489215-53489234 MS.gene010866:intron 35.0%
ATAAGCTTTCACACTCTTGA+AGG + chr7.1:53488295-53488314 None:intergenic 35.0%
ATTCAGACATACACTAGGTT+TGG - chr7.1:53489388-53489407 MS.gene010866:intron 35.0%
ATTCATCATCCAATTCGATC+GGG + chr7.1:53487845-53487864 None:intergenic 35.0%
GAAAGTGAAGTCATGAAACA+GGG - chr7.1:53489216-53489235 MS.gene010866:intron 35.0%
GAGAATTATCGTTATGTCCA+AGG - chr7.1:53490085-53490104 MS.gene010866:CDS 35.0%
GATCGTCATGAAATTTGTCT+TGG - chr7.1:53490183-53490202 MS.gene010866:CDS 35.0%
GGTTATAAGGTGTATCGTAT+AGG + chr7.1:53488638-53488657 None:intergenic 35.0%
GTAATTTAACTGGTCCAACT+TGG + chr7.1:53488587-53488606 None:intergenic 35.0%
GTGATAGCAGGTAATTTAAC+TGG + chr7.1:53488597-53488616 None:intergenic 35.0%
GTTAAATTACCTGCTATCAC+AGG - chr7.1:53488597-53488616 MS.gene010866:intron 35.0%
GTTAGTATAAGTTCACATGC+AGG + chr7.1:53490117-53490136 None:intergenic 35.0%
TAAGCTTTCACACTCTTGAA+GGG + chr7.1:53488294-53488313 None:intergenic 35.0%
TAGCTATCAGAGAAGAAGAA+GGG + chr7.1:53488796-53488815 None:intergenic 35.0%
TATGAATACACCAATGGTGA+TGG - chr7.1:53488443-53488462 MS.gene010866:intron 35.0%
TGTCATCAAGAAGAACAAGA+AGG - chr7.1:53487646-53487665 MS.gene010866:CDS 35.0%
TTAGCTATCAGAGAAGAAGA+AGG + chr7.1:53488797-53488816 None:intergenic 35.0%
TTGCAAACCATGATAATCTG+TGG - chr7.1:53490039-53490058 MS.gene010866:CDS 35.0%
TTGGGAGAAAAGAGAGAATA+TGG + chr7.1:53487713-53487732 None:intergenic 35.0%
TTGTTTGCCATGTTTGTGAA+GGG - chr7.1:53488113-53488132 MS.gene010866:intron 35.0%
TTTAGCACCACAGATTATCA+TGG + chr7.1:53490049-53490068 None:intergenic 35.0%
! ATGATAATCTGTGGTGCTAA+AGG - chr7.1:53490048-53490067 MS.gene010866:CDS 35.0%
! CAAACAAGTTGAGAACAACA+AGG + chr7.1:53488100-53488119 None:intergenic 35.0%
! GGAATCTAGCTTGAACAAAA+CGG + chr7.1:53487901-53487920 None:intergenic 35.0%
! TCCACATCAATATTCTGGTT+CGG + chr7.1:53489294-53489313 None:intergenic 35.0%
! TGAAGGGTTTTTCTTCTGTT+AGG - chr7.1:53488129-53488148 MS.gene010866:intron 35.0%
!! AATAAAGGATTTTGAGGGAG+GGG + chr7.1:53488157-53488176 None:intergenic 35.0%
!! AGTTTTTAACTGGTCCAAGT+TGG - chr7.1:53489488-53489507 MS.gene010866:CDS 35.0%
!! ATCTAAGGCCAGTTTTTAAC+TGG - chr7.1:53489478-53489497 MS.gene010866:CDS 35.0%
!! GATTTAGTGTTGCTTCTAGT+TGG - chr7.1:53488206-53488225 MS.gene010866:CDS 35.0%
!! GGATGAGGTTTGTTAAGTTT+AGG - chr7.1:53489712-53489731 MS.gene010866:CDS 35.0%
!! TAGCTTGTTGTTGGGTTATA+AGG + chr7.1:53488651-53488670 None:intergenic 35.0%
!! TTGAAGGGTAAAAGAGTACT+TGG + chr7.1:53488279-53488298 None:intergenic 35.0%
!!! AGAGTTTTGGAAAGACGAAA+AGG + chr7.1:53488916-53488935 None:intergenic 35.0%
!!! ATTTTAAGTTGGACCAGTGA+AGG + chr7.1:53489521-53489540 None:intergenic 35.0%
!!! GAAACAGGGTTTATTTTGCA+AGG - chr7.1:53489230-53489249 MS.gene010866:intron 35.0%
!!! GTTTATGTTTTGGTCCAAGT+TGG - chr7.1:53488570-53488589 MS.gene010866:intron 35.0%
AAACCTGCGAACTTTATCTG+GGG + chr7.1:53490154-53490173 None:intergenic 40.0%
ACAAACCTGCGAACTTTATC+TGG + chr7.1:53490156-53490175 None:intergenic 40.0%
ACCGAACCAGAATATTGATG+TGG - chr7.1:53489290-53489309 MS.gene010866:intron 40.0%
AGAGAGAATATGGCCTAGAA+TGG + chr7.1:53487703-53487722 None:intergenic 40.0%
AGCTATCAGAGAAGAAGAAG+GGG + chr7.1:53488795-53488814 None:intergenic 40.0%
ATATGGCCTAGAATGGTATC+TGG + chr7.1:53487696-53487715 None:intergenic 40.0%
ATATGTCCAGAAAATCTGGG+TGG - chr7.1:53489828-53489847 MS.gene010866:CDS 40.0%
CAAACCTGCGAACTTTATCT+GGG + chr7.1:53490155-53490174 None:intergenic 40.0%
CAATACCATGTTGCACAACA+TGG + chr7.1:53488007-53488026 None:intergenic 40.0%
CATAAACTGGTCCAAGCTAA+AGG + chr7.1:53488557-53488576 None:intergenic 40.0%
CATCAAGAAGAACAAGAAGG+AGG - chr7.1:53487649-53487668 MS.gene010866:CDS 40.0%
CCAAAACTCTGTTTGTGTCA+AGG - chr7.1:53488926-53488945 MS.gene010866:intron 40.0%
CTACAACTAAGAATGCTAGC+AGG + chr7.1:53488074-53488093 None:intergenic 40.0%
CTGCTAGCATTCTTAGTTGT+AGG - chr7.1:53488072-53488091 MS.gene010866:intron 40.0%
CTTGTTTGCCATGTTTGTGA+AGG - chr7.1:53488112-53488131 MS.gene010866:intron 40.0%
GAATATTGATGTGGAGCAGA+AGG - chr7.1:53489299-53489318 MS.gene010866:intron 40.0%
GATAAAGTTCGCAGGTTTGT+TGG - chr7.1:53490156-53490175 MS.gene010866:CDS 40.0%
GGCGAACAGTGAAAATTCAA+TGG - chr7.1:53489066-53489085 MS.gene010866:intron 40.0%
TAAGCTTCAAAACCTTGAGC+TGG - chr7.1:53489691-53489710 MS.gene010866:CDS 40.0%
TAGTGAAAAGAGTGAGACCA+AGG + chr7.1:53488034-53488053 None:intergenic 40.0%
TATAAGTTCACATGCAGGAG+AGG + chr7.1:53490112-53490131 None:intergenic 40.0%
TCTGCATTCAGACATACACT+AGG - chr7.1:53489383-53489402 MS.gene010866:intron 40.0%
TCTGCTCCACATCAATATTC+TGG + chr7.1:53489299-53489318 None:intergenic 40.0%
! CCTTGACACAAACAGAGTTT+TGG + chr7.1:53488929-53488948 None:intergenic 40.0%
! GCATTGTGAAGTGCTTTCAA+CGG + chr7.1:53488374-53488393 None:intergenic 40.0%
! GCTTGGACCAGTTTATGTTT+TGG - chr7.1:53488560-53488579 MS.gene010866:intron 40.0%
!! ACATCAATATTCTGGTTCGG+TGG + chr7.1:53489291-53489310 None:intergenic 40.0%
!! AGGGTTTACTAGCTTGTTGT+TGG + chr7.1:53488660-53488679 None:intergenic 40.0%
!! GGGTTTACTAGCTTGTTGTT+GGG + chr7.1:53488659-53488678 None:intergenic 40.0%
!! GTTGAAAGCACTTCACAATG+CGG - chr7.1:53488373-53488392 MS.gene010866:intron 40.0%
!! TTTCTAGGGTTCCTTTAGCT+TGG - chr7.1:53488543-53488562 MS.gene010866:intron 40.0%
!!! AAGTTTTGAGGTGTAGTGGA+AGG + chr7.1:53489876-53489895 None:intergenic 40.0%
!!! AGCTCAAGGTTTTGAAGCTT+AGG + chr7.1:53489692-53489711 None:intergenic 40.0%
!!! ATGCAAGTTTTGAGGTGTAG+TGG + chr7.1:53489880-53489899 None:intergenic 40.0%
!!! GCTCAAGGTTTTGAAGCTTA+GGG + chr7.1:53489691-53489710 None:intergenic 40.0%
!!! GTTTTGGAAAGACGAAAAGG+CGG + chr7.1:53488913-53488932 None:intergenic 40.0%
AACAAACCTCATCCAGCTCA+AGG + chr7.1:53489706-53489725 None:intergenic 45.0%
AAGAGTTTCCACCTCAAGGT+TGG - chr7.1:53487924-53487943 MS.gene010866:CDS 45.0%
ATGTCTGAATGCAGAGTAGC+AGG + chr7.1:53489378-53489397 None:intergenic 45.0%
CACTGTTCGCCAAACCAATT+GGG + chr7.1:53489057-53489076 None:intergenic 45.0%
CAGAACTTCTTAGGCCAACA+GGG - chr7.1:53489904-53489923 MS.gene010866:CDS 45.0%
CATCAAGAGTTTCCACCTCA+AGG - chr7.1:53487920-53487939 MS.gene010866:CDS 45.0%
CATTCCCAGTGTGGTCAAAT+GGG - chr7.1:53487977-53487996 MS.gene010866:CDS 45.0%
CCAAAATGGCCCGATTTAGT+TGG - chr7.1:53489144-53489163 MS.gene010866:intron 45.0%
CTTGAGGTGGAAACTCTTGA+TGG + chr7.1:53487922-53487941 None:intergenic 45.0%
GAATTACGACCCGATCGAAT+TGG - chr7.1:53487833-53487852 MS.gene010866:CDS 45.0%
GACGGTTGTCATTGAGAGTT+TGG + chr7.1:53489440-53489459 None:intergenic 45.0%
GCTATCAGAGAAGAAGAAGG+GGG + chr7.1:53488794-53488813 None:intergenic 45.0%
GGTGAGTTATGAGAGACAAG+AGG + chr7.1:53488773-53488792 None:intergenic 45.0%
GGTGTATCGTATAGGACAAC+CGG + chr7.1:53488630-53488649 None:intergenic 45.0%
GTGAACATGTAATTCTGGGC+CGG + chr7.1:53489344-53489363 None:intergenic 45.0%
GTTGACCATGTTGTGCAACA+TGG - chr7.1:53487999-53488018 MS.gene010866:CDS 45.0%
TACCATATCCAACCTTGAGG+TGG + chr7.1:53487935-53487954 None:intergenic 45.0%
TCAAAACCTTGAGCTGGATG+AGG - chr7.1:53489697-53489716 MS.gene010866:CDS 45.0%
TCAACCCATTTGACCACACT+GGG + chr7.1:53487984-53488003 None:intergenic 45.0%
TCACTGTTCGCCAAACCAAT+TGG + chr7.1:53489058-53489077 None:intergenic 45.0%
TCAGAACTTCTTAGGCCAAC+AGG - chr7.1:53489903-53489922 MS.gene010866:CDS 45.0%
TGAACATGTAATTCTGGGCC+GGG + chr7.1:53489343-53489362 None:intergenic 45.0%
TGCTATCACAGGTTCTCTTC+CGG - chr7.1:53488608-53488627 MS.gene010866:intron 45.0%
TGGCAACAACCTCTTTGGTT+GGG + chr7.1:53487731-53487750 None:intergenic 45.0%
TTCCACCTCAAGGTTGGATA+TGG - chr7.1:53487930-53487949 MS.gene010866:CDS 45.0%
! CAACATGGTATTGAGAGCCT+TGG - chr7.1:53488014-53488033 MS.gene010866:CDS 45.0%
! CCAACTAAATCGGGCCATTT+TGG + chr7.1:53489147-53489166 None:intergenic 45.0%
! CTCTTTTCTCCCAACCAAAG+AGG - chr7.1:53487719-53487738 MS.gene010866:CDS 45.0%
! TAAGTTGGACCAGTGAAGGT+TGG + chr7.1:53489517-53489536 None:intergenic 45.0%
!! GGGTAAAAGAGTACTTGGAG+TGG + chr7.1:53488274-53488293 None:intergenic 45.0%
AAACCGTAGCATTCCCAGTG+TGG - chr7.1:53487968-53487987 MS.gene010866:CDS 50.0%
AATCTGGGTGGACCCGAAAT+TGG - chr7.1:53489840-53489859 MS.gene010866:CDS 50.0%
ACCAACGGCAAAGACAACAG+AGG - chr7.1:53487810-53487829 MS.gene010866:CDS 50.0%
AGTTGGAGACCAACCTTCAC+TGG - chr7.1:53489505-53489524 MS.gene010866:CDS 50.0%
CCAACGGCAAAGACAACAGA+GGG - chr7.1:53487811-53487830 MS.gene010866:CDS 50.0%
CTAGCGTCCTATCGAAGAGA+TGG - chr7.1:53487751-53487770 MS.gene010866:CDS 50.0%
GAAAAGGCGGCAACGGAAAA+TGG + chr7.1:53488900-53488919 None:intergenic 50.0%
GAAAGACGAAAAGGCGGCAA+CGG + chr7.1:53488907-53488926 None:intergenic 50.0%
GATGCCTCCATCTCTTCGAT+AGG + chr7.1:53487761-53487780 None:intergenic 50.0%
GCATTCCCAGTGTGGTCAAA+TGG - chr7.1:53487976-53487995 MS.gene010866:CDS 50.0%
GCTAGTGGCAACAACCTCTT+TGG + chr7.1:53487736-53487755 None:intergenic 50.0%
GGAAGAGAACCTGTGATAGC+AGG + chr7.1:53488609-53488628 None:intergenic 50.0%
GGCAACGGAAAATGGTGTGA+CGG + chr7.1:53488892-53488911 None:intergenic 50.0%
GTCAACCCATTTGACCACAC+TGG + chr7.1:53487985-53488004 None:intergenic 50.0%
GTGGCAACAACCTCTTTGGT+TGG + chr7.1:53487732-53487751 None:intergenic 50.0%
TCTCCCCAGATAAAGTTCGC+AGG - chr7.1:53490148-53490167 MS.gene010866:CDS 50.0%
TCTCTTCGATAGGACGCTAG+TGG + chr7.1:53487751-53487770 None:intergenic 50.0%
TGACCACACTGGGAATGCTA+CGG + chr7.1:53487974-53487993 None:intergenic 50.0%
TTGACATAAGCTCGCCCTGT+TGG + chr7.1:53489921-53489940 None:intergenic 50.0%
! AGGCACTGCGGAACCAATTT+CGG + chr7.1:53489856-53489875 None:intergenic 50.0%
! GGAAAATGGTGTGACGGAAG+AGG + chr7.1:53488886-53488905 None:intergenic 50.0%
!! CGAAGAGATGGAGGCATCAA+TGG - chr7.1:53487763-53487782 MS.gene010866:CDS 50.0%
!! GTGAAGGTTGGTCTCCAACT+TGG + chr7.1:53489505-53489524 None:intergenic 50.0%
CCCTCTGTTGTCTTTGCCGT+TGG + chr7.1:53487814-53487833 None:intergenic 55.0%
GCGTCCTATCGAAGAGATGG+AGG - chr7.1:53487754-53487773 MS.gene010866:CDS 55.0%
GGCACTGCGGAACCAATTTC+GGG + chr7.1:53489855-53489874 None:intergenic 55.0%
! GAGAGACCTGCTACTTGACC+CGG - chr7.1:53489322-53489341 MS.gene010866:intron 55.0%
! TCGGGTCCACCCAGATTTTC+TGG + chr7.1:53489837-53489856 None:intergenic 55.0%
!! AGGTGTAGTGGAAGGCACTG+CGG + chr7.1:53489868-53489887 None:intergenic 55.0%
TCACATGCAGGAGAGGCCCT+TGG + chr7.1:53490105-53490124 None:intergenic 60.0%
! ACGGAAGAGGAGTACGCTGC+CGG + chr7.1:53488873-53488892 None:intergenic 60.0%
AGTACGCTGCCGGAGGATGG+AGG + chr7.1:53488863-53488882 None:intergenic 65.0%
GTACGCTGCCGGAGGATGGA+GGG + chr7.1:53488862-53488881 None:intergenic 65.0%
TCTGGGCCGGGTCAAGTAGC+AGG + chr7.1:53489331-53489350 None:intergenic 65.0%
TGCCGGAGGATGGAGGGAGA+GGG + chr7.1:53488856-53488875 None:intergenic 65.0%
! AGGAGTACGCTGCCGGAGGA+TGG + chr7.1:53488866-53488885 None:intergenic 65.0%
! GAAGAGGAGTACGCTGCCGG+AGG + chr7.1:53488870-53488889 None:intergenic 65.0%
CCCCCTCTCCCTCCATCCTC+CGG - chr7.1:53488851-53488870 MS.gene010866:intron 70.0%
CCGGAGGATGGAGGGAGAGG+GGG + chr7.1:53488854-53488873 None:intergenic 70.0%
CTGCCGGAGGATGGAGGGAG+AGG + chr7.1:53488857-53488876 None:intergenic 70.0%
GAGGATGGAGGGAGAGGGGG+TGG + chr7.1:53488851-53488870 None:intergenic 70.0%
GCCGGAGGATGGAGGGAGAG+GGG + chr7.1:53488855-53488874 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 53487645 53490218 53487645 ID=MS.gene010866
chr7.1 mRNA 53487645 53490218 53487645 ID=MS.gene010866.t1;Parent=MS.gene010866
chr7.1 exon 53489442 53490218 53489442 ID=MS.gene010866.t1.exon1;Parent=MS.gene010866.t1
chr7.1 CDS 53489442 53490218 53489442 ID=cds.MS.gene010866.t1;Parent=MS.gene010866.t1
chr7.1 exon 53488145 53488282 53488145 ID=MS.gene010866.t1.exon2;Parent=MS.gene010866.t1
chr7.1 CDS 53488145 53488282 53488145 ID=cds.MS.gene010866.t1;Parent=MS.gene010866.t1
chr7.1 exon 53487645 53488061 53487645 ID=MS.gene010866.t1.exon3;Parent=MS.gene010866.t1
chr7.1 CDS 53487645 53488061 53487645 ID=cds.MS.gene010866.t1;Parent=MS.gene010866.t1
Gene Sequence

>MS.gene010866

ATGTCATCAAGAAGAACAAGAAGGAGGTATGACGTCATCAGCAATTTACCAGATACCATTCTAGGCCATATTCTCTCTTTTCTCCCAACCAAAGAGGTTGTTGCCACTAGCGTCCTATCGAAGAGATGGAGGCATCAATGGTGCTCAGTTCTTGATATCAACTTAACCAACGGCAAAGACAACAGAGGGAATTACGACCCGATCGAATTGGATGATGAATATACCCTTTTTAGGTTTAACGAGTTTGTGTTCTCCGTTTTGTTCAAGCTAGATTCCATCAAGAGTTTCCACCTCAAGGTTGGATATGGTAATTCTGCTCTTGAAAACCGTAGCATTCCCAGTGTGGTCAAATGGGTTGACCATGTTGTGCAACATGGTATTGAGAGCCTTGGTCTCACTCTTTTCACTAGCATTGATATGAAATTGCCTGCTAGCATTCTTAGTTGTAGGACCCTTGTTGTTCTCAACTTGTTTGCCATGTTTGTGAAGGGTTTTTCTTCTGTTAGGCTCCCCTCCCTCAAAATCCTTTATTTAGAAGTTTGTTCATTCCTAAATGATCAAGATTTAGTGTTGCTTCTAGTTGGATGTCCAATTCTTGAAGATTTACATATAGAACATTTAGAATTCCACTCCAAGTACTCTTTTACCCTTCAAGAGTGTGAAAGCTTATGCTTAAGCTTAAGCAAGTTGACCAAAGCACAAATGCTTTACTTTTATCGTCATTTTCCGTTGAAAGCACTTCACAATGCGGAGAAACTATACATAGAACTAAATCAGGTGTGAAATTTATTATTGCTATATGAATACACCAATGGTGATGGAATAAAAGATAAGAACATGTTGATTTTGTTTTTGCTTTGTTTTTGAATACTTTTTACCTTATTTTTGACTGTATATATTTCTAGGGTTCCTTTAGCTTGGACCAGTTTATGTTTTGGTCCAAGTTGGACCAGTTAAATTACCTGCTATCACAGGTTCTCTTCCGGTTGTCCTATACGATACACCTTATAACCCAACAACAAGCTAGTAAACCCTTTTCCTCATTTAATTTATAAAGTTATTATTTTTTCAGATCCAACTTACAGATATCATGAGATTTTGAGGAAACATTAAACATTAAACATTCCTCTTGTCTCTCATAACTCACCCCCTTCTTCTTCTCTGATAGCTAACCCAGAAATAATTTAAGATGATTCATCACTGCCACCCCCTCTCCCTCCATCCTCCGGCAGCGTACTCCTCTTCCGTCACACCATTTTCCGTTGCCGCCTTTTCGTCTTTCCAAAACTCTGTTTGTGTCAAGGTATTAATACCCATGAAATTCAATGGAAATCTTCAGATCATTAAGAAATATAAATCTTAAAATCAAACCCAATTGGTTTGGTAGAAATATAAATCTTAAAATCAAACCCAATTGGTTTGGCGAACAGTGAAAATTCAATGGAATCAACCAACAATACAAACAAAATTTAGCAAAATCTCTTTCTCTAATTTTAAAACCAAAATGGCCCGATTTAGTTGGCATATTATAAGATCTAAATTCAGTAAATGCAGTCATGAAACAAATAACAGAAAGTGAAGTCATGAAACAGGGTTTATTTTGCAAGGTATTATAACATGGATTTGGGTCAACGATAAATTAACCACCGAACCAGAATATTGATGTGGAGCAGAAGGGAGAGACCTGCTACTTGACCCGGCCCAGAATTACATGTTCACAAGATGACAGACCTGCTACTCTGCATTCAGACATACACTAGGTTTGGATTTTATTCAACTTATACATCAGGTTCCAAACTCTCAATGACAACCGTCCATATTATTTATCATTAAATCTAAGGCCAGTTTTTAACTGGTCCAAGTTGGAGACCAACCTTCACTGGTCCAACTTAAAATTTGCCTATATTTCTATGTTTGTTTTCCTTGTTTTTTTTAGATATATCGAAGTTTTGATGAGATTCCTACCTTTCATAATTTGACTAAGTTGAAACTTCACTCTATCAACTCTAATTGGAATTTGTTAGTGCAAGTGCTCAATCATTGCCCTAAGCTTCAAAACCTTGAGCTGGATGAGGTTTGTTAAGTTTAGGGATCATATCTTATTTTATTTTATCTTACATGCTTTTAAGATTTAATTAATTCTATCTATATTAATAGGGCTCGAGATATGCTGATCCAAGAAAATATGTCCAGAAAATCTGGGTGGACCCGAAATTGGTTCCGCAGTGCCTTCCACTACACCTCAAAACTTGCATTTTTCAGAACTTCTTAGGCCAACAGGGCGAGCTTATGTCAACAGTATATATTCTGAAGAATGCTTGCATTTTTCAGAACTTCTTAGGCCAACAGGGCGAGCTTATGTCAACAGTATATATTCTGAAGAATGCTAGAGTTTTGCAAACCATGATAATCTGTGGTGCTAAAGGTCTCAAAATTGAAAGAGAATTATCGTTATGTCCAAGGGCCTCTCCTGCATGTGAACTTATACTAACTGCAGATAAGATCTCCCCAGATAAAGTTCGCAGGTTTGTTGGTTTTGATCGTCATGAAATTTGTCTTGGTGAACAAGTATAG

Protein sequence

>MS.gene010866.t1

MSSRRTRRRYDVISNLPDTILGHILSFLPTKEVVATSVLSKRWRHQWCSVLDINLTNGKDNRGNYDPIELDDEYTLFRFNEFVFSVLFKLDSIKSFHLKVGYGNSALENRSIPSVVKWVDHVVQHGIESLGLTLFTSIDMKLPASILSCRTLVVLNLFAMFVKGFSSVRLPSLKILYLEVCSFLNDQDLVLLLVGCPILEDLHIEHLEFHSKYSFTLQECESLCLSLSKLTKAQMLYFYRHFPLKALHNAEKLYIELNQIYRSFDEIPTFHNLTKLKLHSINSNWNLLVQVLNHCPKLQNLELDEGSRYADPRKYVQKIWVDPKLVPQCLPLHLKTCIFQNFLGQQGELMSTVYILKNACIFQNFLGQQGELMSTVYILKNARVLQTMIICGAKGLKIERELSLCPRASPACELILTADKISPDKVRRFVGFDRHEICLGEQV