AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34753


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34753.t1 MTR_8g469020 92.105 456 36 0 1 456 1 456 0.0 853
MS.gene34753.t1 MTR_8g058965 66.000 450 150 2 7 455 13 460 0.0 573
MS.gene34753.t1 MTR_4g050250 63.119 404 136 7 5 397 19 420 2.99e-165 472
MS.gene34753.t1 MTR_8g070950 55.246 467 150 10 7 456 15 439 4.20e-158 455
MS.gene34753.t1 MTR_8g062010 53.275 458 173 7 7 455 9 434 9.22e-151 436
MS.gene34753.t1 MTR_8g062080 51.386 469 176 13 2 455 18 449 2.18e-142 415
MS.gene34753.t1 MTR_8g062310 52.423 454 167 11 7 456 25 433 3.66e-140 409
MS.gene34753.t1 MTR_8g062300 47.131 488 187 11 7 455 26 481 2.29e-126 375
MS.gene34753.t1 MTR_2g083840 44.371 453 232 7 5 451 19 457 9.10e-102 311
MS.gene34753.t1 MTR_8g467790 46.269 402 147 13 7 395 148 493 2.81e-98 304
MS.gene34753.t1 MTR_4g032730 40.506 474 230 12 7 450 15 466 1.67e-93 290
MS.gene34753.t1 MTR_8g468810 41.901 463 227 16 7 451 25 463 4.00e-92 287
MS.gene34753.t1 MTR_8g058970 41.719 477 228 17 7 451 19 477 6.42e-92 287
MS.gene34753.t1 MTR_8g062270 40.305 459 238 11 7 450 16 453 2.41e-89 279
MS.gene34753.t1 MTR_8g468840 41.150 452 240 9 7 449 14 448 1.01e-86 273
MS.gene34753.t1 MTR_8g467800 42.060 466 227 12 7 456 20 458 3.76e-86 271
MS.gene34753.t1 MTR_5g092960 39.130 460 247 8 7 450 19 461 2.17e-83 264
MS.gene34753.t1 MTR_8g014260 39.427 454 248 14 7 451 16 451 8.48e-78 249
MS.gene34753.t1 MTR_8g468760 38.780 459 217 13 7 450 9 418 1.37e-70 229
MS.gene34753.t1 MTR_8g468810 41.240 371 178 13 7 361 25 371 1.54e-66 218
MS.gene34753.t1 MTR_8g445780 39.409 406 210 13 7 404 13 390 1.44e-63 211
MS.gene34753.t1 MTR_2g086020 69.863 146 44 0 311 456 175 320 3.29e-63 207
MS.gene34753.t1 MTR_2g086020 46.358 151 65 4 34 178 2 142 5.72e-30 119
MS.gene34753.t1 MTR_8g014160 37.446 462 207 19 1 451 35 425 5.68e-63 210
MS.gene34753.t1 MTR_8g468810 42.345 307 146 9 7 305 25 308 7.39e-57 191
MS.gene34753.t1 MTR_8g468810 42.345 307 146 9 7 305 25 308 1.21e-56 191
MS.gene34753.t1 MTR_5g092960 38.420 367 200 6 7 361 19 371 1.54e-56 192
MS.gene34753.t1 MTR_8g468810 42.345 307 146 9 7 305 25 308 1.83e-56 191
MS.gene34753.t1 MTR_8g467800 40.836 311 157 8 7 311 20 309 1.94e-42 153
MS.gene34753.t1 MTR_4g024710 37.785 307 170 11 149 451 58 347 5.08e-41 150
MS.gene34753.t1 MTR_8g014210 39.574 235 130 8 222 451 4 231 8.13e-37 135
MS.gene34753.t1 MTR_5g021550 52.055 146 64 6 7 148 19 162 1.57e-33 124
MS.gene34753.t1 MTR_4g024745 36.806 288 159 11 147 429 10 279 3.08e-33 127
MS.gene34753.t1 MTR_1g041245 29.130 460 233 19 4 451 8 386 2.05e-32 127
MS.gene34753.t1 MTR_5g080710 29.911 448 269 17 7 443 33 446 4.53e-31 124
MS.gene34753.t1 MTR_8g077460 38.889 234 121 7 7 234 10 227 7.00e-31 122
MS.gene34753.t1 MTR_8g077460 45.833 144 74 4 309 451 235 375 1.16e-29 119
MS.gene34753.t1 MTR_5g084070 26.622 447 280 15 6 443 12 419 3.62e-30 122
MS.gene34753.t1 MTR_3g099800 58.621 87 35 1 363 448 19 105 6.83e-28 107
MS.gene34753.t1 MTR_3g108150 26.856 458 249 16 1 450 7 386 9.46e-26 108
MS.gene34753.t1 MTR_6g022500 29.103 457 231 16 7 451 101 476 3.50e-25 108
MS.gene34753.t1 MTR_4g024720 49.123 114 52 4 7 116 17 128 1.04e-24 101
MS.gene34753.t1 MTR_7g056433 26.211 454 254 15 5 451 10 389 5.66e-24 103
MS.gene34753.t1 MTR_7g115270 26.096 456 261 17 4 448 9 399 1.71e-23 102
MS.gene34753.t1 MTR_8g014290 42.857 154 74 5 7 149 10 160 5.65e-23 95.5
MS.gene34753.t1 MTR_2g036470 26.754 456 252 18 5 450 12 395 4.41e-21 95.1
MS.gene34753.t1 MTR_7g026500 27.233 459 253 17 3 452 10 396 6.00e-21 94.7
MS.gene34753.t1 MTR_3g023630 25.778 450 244 18 5 448 6 371 2.99e-20 92.4
MS.gene34753.t1 MTR_7g032370 24.541 436 243 16 18 451 1 352 1.94e-19 89.7
MS.gene34753.t1 MTR_7g034115 25.618 445 249 18 4 443 8 375 9.66e-19 88.2
MS.gene34753.t1 MTR_3g087260 26.694 487 272 16 7 450 12 456 4.22e-18 86.7
MS.gene34753.t1 MTR_1g108820 27.876 452 246 20 4 448 5 383 6.19e-18 85.9
MS.gene34753.t1 MTR_7g033990 26.457 446 244 14 5 444 9 376 6.27e-18 85.9
MS.gene34753.t1 MTR_7g056447 31.905 210 110 8 4 209 6 186 1.00e-17 84.0
MS.gene34753.t1 MTR_3g107160 26.444 450 250 19 7 451 10 383 2.08e-17 84.3
MS.gene34753.t1 MTR_2g007500 30.047 213 111 6 2 211 9 186 2.97e-17 83.2
MS.gene34753.t1 MTR_6g011460 26.724 464 233 19 7 451 46 421 4.17e-17 83.6
MS.gene34753.t1 MTR_1g038710 26.897 435 271 16 7 419 19 428 5.23e-17 83.6
MS.gene34753.t1 MTR_4g093690 31.293 294 143 15 7 289 18 263 5.43e-17 81.3
MS.gene34753.t1 MTR_7g032380 31.905 210 116 8 4 211 8 192 2.03e-16 80.9
MS.gene34753.t1 MTR_7g032380 30.573 157 95 4 301 451 208 356 1.96e-11 65.9
MS.gene34753.t1 MTR_5g007410 26.222 450 258 16 12 455 31 412 5.04e-16 80.5
MS.gene34753.t1 MTR_4g098590 25.059 423 235 15 9 418 1 354 1.03e-15 79.0
MS.gene34753.t1 MTR_8g014230 44.048 84 45 2 361 444 17 98 1.23e-15 72.8
MS.gene34753.t1 MTR_5g060570 29.183 257 140 12 7 252 17 242 1.85e-15 76.6
MS.gene34753.t1 MTR_5g073420 30.952 210 122 8 3 210 7 195 1.95e-15 78.2
MS.gene34753.t1 MTR_4g039440 26.596 470 231 20 6 451 33 412 3.42e-15 77.8
MS.gene34753.t1 MTR_7g088260 25.612 449 253 18 7 451 91 462 4.38e-15 77.4
MS.gene34753.t1 MTR_8g085430 29.817 218 117 9 4 211 8 199 1.27e-14 75.1
MS.gene34753.t1 MTR_4g055990 27.673 477 250 21 7 419 9 454 1.35e-14 76.3
MS.gene34753.t1 MTR_7g021630 27.434 339 199 12 7 331 17 322 1.58e-14 75.1
MS.gene34753.t1 MTR_4g056030 32.524 206 118 7 7 211 9 194 1.65e-14 75.9
MS.gene34753.t1 MTR_7g021630 27.434 339 199 12 7 331 17 322 1.82e-14 75.1
MS.gene34753.t1 MTR_7g055943 32.710 214 106 9 5 210 38 221 1.99e-14 75.5
MS.gene34753.t1 MTR_4g055990 27.673 477 250 21 7 419 9 454 3.05e-14 75.1
MS.gene34753.t1 MTR_4g056020 25.223 448 264 13 7 423 9 416 3.82e-14 74.7
MS.gene34753.t1 MTR_5g083890 24.396 455 251 19 4 433 3 389 4.16e-14 74.7
MS.gene34753.t1 MTR_5g008920 31.754 211 113 8 5 211 7 190 5.75e-14 73.6
MS.gene34753.t1 MTR_7g034110 30.137 219 114 9 4 213 8 196 6.33e-14 73.2
MS.gene34753.t1 MTR_5g087940 34.389 221 113 10 7 220 26 221 1.02e-13 73.2
MS.gene34753.t1 MTR_2g007400 24.008 479 261 18 1 454 6 406 1.53e-13 72.4
MS.gene34753.t1 MTR_1g053025 25.546 458 252 20 7 448 2 386 1.55e-13 72.4
MS.gene34753.t1 MTR_3g107120 25.541 462 250 17 7 452 9 392 1.65e-13 72.4
MS.gene34753.t1 MTR_3g099830 25.536 466 221 21 5 448 10 371 1.86e-13 72.0
MS.gene34753.t1 MTR_5g058100 30.415 217 120 7 2 214 4 193 3.09e-13 71.6
MS.gene34753.t1 MTR_7g098570 29.911 224 120 9 7 222 20 214 8.05e-13 70.5
MS.gene34753.t1 MTR_6g022360 32.524 206 102 8 6 210 42 211 1.21e-12 69.7
MS.gene34753.t1 MTR_3g105060 26.577 222 132 6 4 223 11 203 1.22e-12 69.7
MS.gene34753.t1 MTR_5g058000 30.244 205 111 8 7 207 8 184 1.73e-12 68.9
MS.gene34753.t1 MTR_3g107100 33.010 206 114 8 7 211 11 193 2.27e-12 68.9
MS.gene34753.t1 MTR_4g080590 24.590 427 279 14 7 419 23 420 2.39e-12 68.9
MS.gene34753.t1 MTR_2g005990 29.358 218 121 9 5 210 4 200 3.62e-12 68.2
MS.gene34753.t1 MTR_7g075820 28.899 218 128 6 4 208 3 206 5.85e-12 67.4
MS.gene34753.t1 MTR_3g115430 36.937 111 64 3 342 451 20 125 6.20e-12 63.2
MS.gene34753.t1 MTR_6g022390 35.714 126 73 4 7 126 5 128 7.79e-12 63.5
MS.gene34753.t1 MTR_6g044560 30.645 248 131 10 7 230 178 408 8.65e-12 67.8
MS.gene34753.t1 MTR_0543s0010 31.132 212 113 10 1 211 80 259 8.70e-12 67.4
MS.gene34753.t1 MTR_0492s0020 31.132 212 113 10 1 211 80 259 8.92e-12 67.0
MS.gene34753.t1 MTR_6g044572 32.301 226 114 9 7 210 2 210 9.75e-12 67.0
MS.gene34753.t1 MTR_5g008950 28.251 223 122 9 9 226 1 190 1.05e-11 66.6
MS.gene34753.t1 MTR_2g007450 29.493 217 124 7 7 210 16 216 1.26e-11 66.6
MS.gene34753.t1 MTR_5g045170 32.381 210 104 13 9 210 16 195 1.61e-11 66.2
MS.gene34753.t1 MTR_1g095750 43.529 85 40 3 2 85 41 118 2.29e-11 62.0
MS.gene34753.t1 MTR_3g110010 33.981 206 107 10 7 211 13 190 2.69e-11 66.2
MS.gene34753.t1 MTR_3g036250 29.665 209 118 8 6 210 4 187 3.05e-11 65.1
MS.gene34753.t1 MTR_1089s0010 24.130 460 246 19 7 451 8 379 3.18e-11 65.1
MS.gene34753.t1 MTR_3g109982 33.816 207 108 10 7 212 13 191 3.86e-11 65.9
MS.gene34753.t1 MTR_1g107385 24.622 463 258 18 5 448 30 420 4.32e-11 65.1
MS.gene34753.t1 MTR_7g098510 27.014 211 118 7 7 211 18 198 5.77e-11 64.3
MS.gene34753.t1 MTR_5g061680 30.288 208 116 8 7 210 11 193 8.28e-11 63.5
MS.gene34753.t1 MTR_2g082850 27.315 216 141 7 1 214 16 217 8.96e-11 63.9
MS.gene34753.t1 MTR_3g467400 41.558 77 38 2 6 82 2 71 9.12e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34753.t1 AT4G10400 29.759 457 258 20 7 450 2 408 7.22e-26 109
MS.gene34753.t1 AT4G10400 29.759 457 258 20 7 450 2 408 7.22e-26 109
MS.gene34753.t1 AT4G10400 29.759 457 258 20 7 450 2 408 7.22e-26 109
MS.gene34753.t1 AT5G56420 27.706 462 272 17 7 451 6 422 2.88e-25 107
MS.gene34753.t1 AT5G56420 27.706 462 272 17 7 451 6 422 2.88e-25 107
MS.gene34753.t1 AT5G56420 27.706 462 272 17 7 451 6 422 2.88e-25 107
MS.gene34753.t1 AT4G26340 28.139 462 271 16 7 451 2 419 3.80e-24 104
MS.gene34753.t1 AT1G16930 27.651 481 270 18 5 451 13 449 6.34e-24 104
MS.gene34753.t1 AT1G16930 27.651 481 270 18 5 451 13 449 6.34e-24 104
MS.gene34753.t1 AT1G16930 27.651 481 270 18 5 451 13 449 6.34e-24 104
MS.gene34753.t1 AT5G53840 27.837 467 273 18 7 452 18 441 1.61e-22 100
MS.gene34753.t1 AT4G09920 34.061 229 126 8 7 233 2 207 2.14e-22 97.4
MS.gene34753.t1 AT4G09920 34.061 229 126 8 7 233 2 207 2.14e-22 97.4
MS.gene34753.t1 AT4G09920 34.061 229 126 8 7 233 2 207 2.14e-22 97.4
MS.gene34753.t1 AT4G09920 34.783 230 123 9 7 233 2 207 2.65e-22 97.4
MS.gene34753.t1 AT4G09920 34.783 230 123 9 7 233 2 207 2.65e-22 97.4
MS.gene34753.t1 AT2G26860 29.274 427 239 16 7 410 2 388 6.20e-19 89.0
MS.gene34753.t1 AT2G26860 29.274 427 239 16 7 410 2 388 6.20e-19 89.0
MS.gene34753.t1 AT1G78750 25.053 471 293 16 6 448 17 455 6.26e-19 89.4
MS.gene34753.t1 AT1G78750 25.053 471 293 16 6 448 17 455 6.26e-19 89.4
MS.gene34753.t1 AT3G50710 25.690 471 279 17 7 451 2 427 8.53e-19 88.6
MS.gene34753.t1 AT1G69630 25.482 467 289 17 6 448 17 448 9.54e-19 89.0
MS.gene34753.t1 AT5G56440 27.021 470 275 17 7 450 2 429 1.05e-18 88.6
MS.gene34753.t1 AT5G22730 25.263 475 283 19 7 448 28 463 1.14e-18 88.6
MS.gene34753.t1 AT5G22730 25.263 475 283 19 7 448 28 463 1.14e-18 88.6
MS.gene34753.t1 AT5G60610 27.078 421 256 15 7 415 2 383 1.41e-18 87.8
MS.gene34753.t1 AT5G60610 27.078 421 256 15 7 415 2 383 1.41e-18 87.8
MS.gene34753.t1 AT1G06630 27.005 374 224 13 7 361 12 355 1.41e-18 87.4
MS.gene34753.t1 AT1G06630 27.005 374 224 13 7 361 12 355 1.41e-18 87.4
MS.gene34753.t1 AT1G06630 30.435 230 141 6 7 233 12 225 1.77e-18 86.3
MS.gene34753.t1 AT5G22720 25.470 479 285 17 7 450 23 464 1.94e-18 87.8
MS.gene34753.t1 AT3G59200 33.649 211 109 8 7 210 7 193 2.96e-18 86.7
MS.gene34753.t1 AT3G42770 27.373 453 287 13 9 449 1 423 3.69e-18 87.4
MS.gene34753.t1 AT1G06630 27.224 371 233 11 7 364 12 358 4.69e-18 86.3
MS.gene34753.t1 AT1G06630 27.224 371 233 11 7 364 12 358 4.69e-18 86.3
MS.gene34753.t1 AT1G06630 27.224 371 233 11 7 364 12 358 4.69e-18 86.3
MS.gene34753.t1 AT1G06630 27.224 371 233 11 7 364 12 358 4.69e-18 86.3
MS.gene34753.t1 AT1G06630 26.790 377 227 13 7 364 21 367 4.85e-18 86.3
MS.gene34753.t1 AT1G06630 27.397 365 228 11 7 358 12 352 6.63e-18 86.3
MS.gene34753.t1 AT3G59200 32.547 212 114 7 5 210 5 193 6.76e-18 86.7
MS.gene34753.t1 AT5G56400 25.161 465 290 17 5 451 31 455 1.49e-17 85.1
MS.gene34753.t1 AT5G22610 24.043 470 289 16 7 455 18 440 2.55e-17 84.7
MS.gene34753.t1 AT3G44810 33.333 252 138 12 1 242 1 232 9.36e-17 82.8
MS.gene34753.t1 AT5G56560 26.154 455 283 16 8 451 6 418 1.56e-16 81.6
MS.gene34753.t1 AT4G00160 27.848 474 272 21 7 453 16 446 3.33e-16 80.9
MS.gene34753.t1 AT3G44060 30.198 202 122 5 9 210 1 183 3.92e-16 80.5
MS.gene34753.t1 AT5G53635 25.212 472 275 19 9 450 2 425 4.63e-16 80.5
MS.gene34753.t1 AT4G13985 24.583 480 284 19 6 448 18 456 5.11e-16 80.5
MS.gene34753.t1 AT5G44950 25.758 462 282 21 7 442 4 430 6.91e-16 80.1
MS.gene34753.t1 AT1G13780 23.950 476 301 17 4 448 7 452 1.70e-15 79.0
MS.gene34753.t1 AT5G22610 24.230 487 297 18 7 455 18 470 2.46e-15 78.6
MS.gene34753.t1 AT4G00315 26.582 474 283 17 7 450 2 440 2.68e-15 78.2
MS.gene34753.t1 AT5G56410 27.189 434 254 16 14 418 10 410 3.86e-15 77.8
MS.gene34753.t1 AT1G32375 24.625 467 284 20 7 451 2 422 3.87e-15 77.4
MS.gene34753.t1 AT1G32375 24.625 467 284 20 7 451 2 422 3.87e-15 77.4
MS.gene34753.t1 AT5G50270 27.972 429 256 17 7 418 2 394 7.94e-15 76.6
MS.gene34753.t1 AT2G04230 27.546 432 241 24 7 410 13 400 9.62e-15 76.6
MS.gene34753.t1 AT3G60040 27.358 424 237 18 7 400 230 612 1.16e-14 77.0
MS.gene34753.t1 AT3G60040 27.358 424 237 18 7 400 232 614 1.23e-14 76.6
MS.gene34753.t1 AT3G60040 27.230 426 239 18 5 400 231 615 1.37e-14 76.6
MS.gene34753.t1 AT3G60040 27.230 426 239 18 5 400 230 614 1.46e-14 76.6
MS.gene34753.t1 AT3G60040 27.230 426 239 18 5 400 11 395 1.53e-14 76.3
MS.gene34753.t1 AT5G22670 25.785 446 245 17 5 413 9 405 1.71e-14 75.9
MS.gene34753.t1 AT3G59190 33.333 180 107 5 1 175 6 177 2.05e-14 75.1
MS.gene34753.t1 AT3G59190 33.333 180 107 5 1 175 6 177 2.54e-14 75.5
MS.gene34753.t1 AT4G13965 26.797 459 273 20 6 448 9 420 3.94e-14 74.3
MS.gene34753.t1 AT5G22700 24.099 444 253 15 7 413 6 402 6.95e-14 73.9
MS.gene34753.t1 AT5G22700 24.099 444 253 15 7 413 6 402 6.95e-14 73.9
MS.gene34753.t1 AT5G22700 24.099 444 253 15 7 413 6 402 6.95e-14 73.9
MS.gene34753.t1 AT5G22700 24.099 444 253 15 7 413 6 402 6.95e-14 73.9
MS.gene34753.t1 AT5G56370 24.947 469 277 17 7 450 2 420 8.62e-14 73.6
MS.gene34753.t1 AT5G56370 24.947 469 277 17 7 450 2 420 8.62e-14 73.6
MS.gene34753.t1 AT5G22700 24.099 444 253 15 7 413 43 439 9.78e-14 73.6
MS.gene34753.t1 AT5G22660 24.583 480 275 18 7 448 13 443 1.38e-13 72.8
MS.gene34753.t1 AT1G05080 25.427 468 283 17 7 450 13 438 1.57e-13 72.8
MS.gene34753.t1 AT3G52680 27.893 484 257 19 7 453 21 449 2.39e-13 72.4
MS.gene34753.t1 AT4G14103 30.126 239 135 9 7 240 8 219 2.55e-13 72.0
MS.gene34753.t1 AT5G44940 25.870 460 239 23 7 451 5 377 2.81e-13 71.6
MS.gene34753.t1 AT4G14103 30.126 239 135 9 7 240 8 219 3.54e-13 71.2
MS.gene34753.t1 AT4G14103 30.126 239 135 9 7 240 8 219 3.54e-13 71.2
MS.gene34753.t1 AT3G59160 31.466 232 120 8 1 210 7 221 3.62e-13 71.6
MS.gene34753.t1 AT4G26350 32.683 205 112 7 7 210 2 181 4.66e-13 71.2
MS.gene34753.t1 AT5G56380 25.847 472 289 18 7 451 2 439 5.43e-13 70.9
MS.gene34753.t1 AT5G56380 25.847 472 289 18 7 451 2 439 5.43e-13 70.9
MS.gene34753.t1 AT5G22700 24.455 413 249 16 7 413 43 398 7.88e-13 70.5
MS.gene34753.t1 AT2G42720 33.019 212 111 8 7 210 2 190 1.55e-12 69.7
MS.gene34753.t1 AT3G58920 24.748 497 292 20 7 451 2 468 2.03e-12 69.3
MS.gene34753.t1 AT5G62970 24.449 454 269 16 14 429 10 427 2.35e-12 68.9
MS.gene34753.t1 AT3G52680 34.466 206 108 9 7 210 21 201 3.03e-12 68.2
MS.gene34753.t1 AT5G38590 24.672 458 259 19 7 436 2 401 3.79e-12 68.2
MS.gene34753.t1 AT5G41840 28.241 216 128 8 5 210 12 210 1.03e-11 67.4
MS.gene34753.t1 AT3G26922 30.288 208 112 8 7 210 14 192 3.85e-11 64.3
MS.gene34753.t1 AT3G26922 30.288 208 112 8 7 210 14 192 3.85e-11 64.3
MS.gene34753.t1 AT5G22730 25.459 381 221 16 7 357 28 375 4.11e-11 65.1
MS.gene34753.t1 AT5G18780 24.784 464 291 17 7 448 11 438 4.56e-11 65.1
MS.gene34753.t1 AT5G18780 24.784 464 291 17 7 448 11 438 4.56e-11 65.1
MS.gene34753.t1 AT5G38590 27.211 294 151 13 7 279 2 253 4.90e-11 63.9
MS.gene34753.t1 AT5G41630 26.977 215 125 8 7 210 12 205 8.86e-11 64.3

Find 110 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTCCCATGTTCTTAA+AGG 0.198525 8.3:-41269315 None:intergenic
TGATGTAAATTGCAAAATTC+TGG 0.267891 8.3:-41269075 None:intergenic
GCAAACCTTCTGAACATTCT+TGG 0.269966 8.3:-41267452 None:intergenic
CGTCGTCGCCACGGAGGTTT+TGG 0.271508 8.3:-41267342 None:intergenic
AGGTGGGATTTGAAACATTT+AGG 0.290253 8.3:-41269351 None:intergenic
TAGAACAGTTCTTGTTAGTT+AGG 0.297797 8.3:-41269494 None:intergenic
TCATTACTTGTCTTTCTCTC+TGG 0.347561 8.3:+41268608 MS.gene34753:CDS
CTCAGCTACCTCCGAGATAA+TGG 0.363017 8.3:+41268896 MS.gene34753:CDS
TTCAAGAGGTTGAAATTAAC+CGG 0.370371 8.3:+41268704 MS.gene34753:CDS
CTGACCTTTATTCACATAGA+AGG 0.373907 8.3:+41269372 MS.gene34753:CDS
GTAGCGACTGCTTCGAGGTA+TGG 0.375512 8.3:+41267567 MS.gene34753:CDS
TAACCGGCGTAAATTTCTCT+TGG 0.385560 8.3:+41268720 MS.gene34753:CDS
AATTCTGGATAATTTAGAAC+AGG 0.399159 8.3:-41269060 None:intergenic
ATATCCTTCTATGTGAATAA+AGG 0.410094 8.3:-41269376 None:intergenic
GTATGGGTTCGTGCTGCCAT+TGG 0.410202 8.3:+41267584 MS.gene34753:CDS
CCGCCGTGAAAGTGAATTTG+TGG 0.411438 8.3:+41268865 MS.gene34753:CDS
TTAGGAACTGTTGTTGACTT+TGG 0.424286 8.3:-41269333 None:intergenic
GGAAGGAGAGTATATGTAAG+AGG 0.424715 8.3:-41267313 None:intergenic
AAAACCACATTGGGCATCAT+TGG 0.426834 8.3:+41268800 MS.gene34753:CDS
TATGGGTTCGTGCTGCCATT+GGG 0.427675 8.3:+41267585 MS.gene34753:CDS
GATTCAGCTGTGTCTCCATA+AGG 0.432456 8.3:+41269570 MS.gene34753:CDS
TAGCGACTGCTTCGAGGTAT+GGG 0.439254 8.3:+41267568 MS.gene34753:CDS
ATTCACATAGAAGGATATCA+AGG 0.454447 8.3:+41269381 MS.gene34753:CDS
CAGAAGACTCATGTTGAAGC+TGG 0.456434 8.3:-41269115 None:intergenic
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8.3:-41269309 None:intergenic
TTGAATACTGCGATCAAGAC+TGG 0.461632 8.3:+41267636 MS.gene34753:CDS
CAGCTGAATCAAATTTAAGT+TGG 0.465585 8.3:-41269557 None:intergenic
AATTTCAACCTCTTGAAGAA+AGG 0.468007 8.3:-41268698 None:intergenic
AGTTTCAACATCTTCAATGA+TGG 0.468079 8.3:-41268518 None:intergenic
GTTTCGTAGCGACTGCTTCG+AGG 0.468425 8.3:+41267562 MS.gene34753:CDS
TTACCTGAGGGAAACGAGAT+AGG 0.470101 8.3:-41267693 None:intergenic
CTCGCAGGTGGCGAAATCTC+TGG 0.470853 8.3:+41267375 MS.gene34753:CDS
CCGTGTCACCTTTCTTCAAG+AGG 0.472204 8.3:+41268690 MS.gene34753:CDS
CACAAATTCACTTTCACGGC+GGG 0.472683 8.3:-41268864 None:intergenic
GTCGGTGGTCGGCGGCGCCA+TGG 0.472690 8.3:-41267264 None:intergenic
AGAGTATATGTAAGAGGAGT+GGG 0.472743 8.3:-41267307 None:intergenic
CGTCGGAGAATTCGAAGGCT+TGG 0.481486 8.3:-41267406 None:intergenic
AGCACGGGCAAAACCACATT+GGG 0.482216 8.3:+41268791 MS.gene34753:CDS
GTGCAATCAAGGAGAGAAGA+AGG 0.488566 8.3:-41267671 None:intergenic
CGATCAAGACTGGCAAGTGC+TGG 0.498646 8.3:+41267646 MS.gene34753:CDS
CTTCTATGTGAATAAAGGTC+AGG 0.500493 8.3:-41269371 None:intergenic
GTCTTGATCGCAGTATTCAA+TGG 0.501413 8.3:-41267633 None:intergenic
GCACCTATCTCGTTTCCCTC+AGG 0.503100 8.3:+41267690 MS.gene34753:CDS
GGTCCACAAATTCACTTTCA+CGG 0.507858 8.3:-41268868 None:intergenic
TCATTGAAGATGTTGAAACT+TGG 0.513074 8.3:+41268521 MS.gene34753:CDS
GCCGTCTTCGTGTGAGTCGT+CGG 0.517366 8.3:-41267423 None:intergenic
GAGAGTATATGTAAGAGGAG+TGG 0.518690 8.3:-41267308 None:intergenic
AAACGAGATAGGTGCAATCA+AGG 0.522795 8.3:-41267682 None:intergenic
GAAAGGTGACACGGGAACAT+TGG 0.528334 8.3:-41268681 None:intergenic
TCTCGGAGGTAGCTGAGCAC+AGG 0.529483 8.3:-41268890 None:intergenic
ATATGTAAGAGGAGTGGGTC+CGG 0.532379 8.3:-41267302 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8.3:+41269398 MS.gene34753:CDS
CAATCTAGAGTTTCGAGTAC+GGG 0.535175 8.3:-41268635 None:intergenic
GTTGTATATCACCATTATCT+CGG 0.540702 8.3:-41268907 None:intergenic
CGGTAGAGTGCTTAATCTGT+CGG 0.544699 8.3:-41267282 None:intergenic
ACAATCTAGAGTTTCGAGTA+CGG 0.545191 8.3:-41268636 None:intergenic
TTCTTCAAGTTGAGGCCCAA+TGG 0.546289 8.3:-41267600 None:intergenic
TATGCATCATTTCACATCAA+AGG 0.548174 8.3:+41268934 MS.gene34753:CDS
GTCTTCAAATAGATTCTGAC+TGG 0.552656 8.3:+41268747 MS.gene34753:CDS
AACCATCACCTTTAAGAACA+TGG 0.553947 8.3:+41269307 MS.gene34753:CDS
CGACAGATTAAGCACTCTAC+CGG 0.566165 8.3:+41267283 MS.gene34753:CDS
CATTGGAAACTTGCAGAGTG+TGG 0.571216 8.3:+41268817 MS.gene34753:CDS
GATGGAAGATGAATTGAAGA+AGG 0.577459 8.3:-41268500 None:intergenic
CTTAATCTGTCGGTGGTCGG+CGG 0.577807 8.3:-41267272 None:intergenic
AGAAGACTCATGTTGAAGCT+GGG 0.577975 8.3:-41269114 None:intergenic
GTGCTTAATCTGTCGGTGGT+CGG 0.579525 8.3:-41267275 None:intergenic
CGACGAGTCTCATCTCTCGC+AGG 0.586679 8.3:+41267360 MS.gene34753:CDS
ACAAACAGTTCTTCAAGTTG+AGG 0.586776 8.3:-41267608 None:intergenic
TGATGTCGCGGGATCGACGG+AGG 0.589319 8.3:-41267499 None:intergenic
GCGGTCTGTTGAATGATGAC+TGG 0.590052 8.3:+41267540 MS.gene34753:CDS
CTCGGAGGTAGCTGAGCACA+GGG 0.592614 8.3:-41268889 None:intergenic
AACGTCCAAGAATGTTCAGA+AGG 0.592677 8.3:+41267447 MS.gene34753:CDS
CTATGTGAATAAAGGTCAGG+TGG 0.594985 8.3:-41269368 None:intergenic
ACCATCACCTTTAAGAACAT+GGG 0.597069 8.3:+41269308 MS.gene34753:CDS
CCTCTTGAAGAAAGGTGACA+CGG 0.598686 8.3:-41268690 None:intergenic
TGGCATCTGACAGAGCCCCT+TGG 0.599355 8.3:-41269537 None:intergenic
TCTCTTAATTCAGAGTAGCA+AGG 0.599848 8.3:+41269173 MS.gene34753:CDS
AAGATTAACTGATATACCAA+GGG 0.602286 8.3:+41269521 MS.gene34753:CDS
GAAACTTGGCGCAGGCGTTG+TGG 0.603091 8.3:+41268535 MS.gene34753:CDS
GTCATCATTCAACAGACCGC+TGG 0.604489 8.3:-41267537 None:intergenic
GTAGACGACAGTCGTAGCAC+GGG 0.604782 8.3:+41268776 MS.gene34753:CDS
TGTAGACGACAGTCGTAGCA+CGG 0.604863 8.3:+41268775 MS.gene34753:CDS
TAGCACGGGCAAAACCACAT+TGG 0.607098 8.3:+41268790 MS.gene34753:CDS
AAGATGTTGAAACTTGGCGC+AGG 0.609787 8.3:+41268527 MS.gene34753:CDS
CTCTTGAAGAAAGGTGACAC+GGG 0.612206 8.3:-41268689 None:intergenic
GATGTCGCGGGATCGACGGA+GGG 0.612679 8.3:-41267498 None:intergenic
GAAGATTAACTGATATACCA+AGG 0.613068 8.3:+41269520 MS.gene34753:CDS
GATGAGACTCGTCGTCGCCA+CGG 0.614766 8.3:-41267351 None:intergenic
GGATCGACGGAGGGAGAGCA+CGG 0.617495 8.3:-41267489 None:intergenic
TTCTGGATAATTTAGAACAG+GGG 0.624941 8.3:-41269058 None:intergenic
ATTCTGGATAATTTAGAACA+GGG 0.628560 8.3:-41269059 None:intergenic
GGCGTTGTGGAATTCGACAT+AGG 0.638702 8.3:+41268548 MS.gene34753:CDS
TATGTGAATAAAGGTCAGGT+GGG 0.640734 8.3:-41269367 None:intergenic
TTTAGAACAGGGGTGCGAAG+TGG 0.642724 8.3:-41269048 None:intergenic
TGAGTCGTCGGAGAATTCGA+AGG 0.644607 8.3:-41267411 None:intergenic
TGGAAACTTGCAGAGTGTGG+AGG 0.645099 8.3:+41268820 MS.gene34753:CDS
GTTTCCAATGATGCCCAATG+TGG 0.653602 8.3:-41268804 None:intergenic
TTAAGAGAACTTGAAGCACA+TGG 0.655061 8.3:-41269158 None:intergenic
TCCGACGACTCACACGAAGA+CGG 0.655154 8.3:+41267422 MS.gene34753:CDS
AATCTAGAGTTTCGAGTACG+GGG 0.656709 8.3:-41268634 None:intergenic
TAGAGTGCTTAATCTGTCGG+TGG 0.661153 8.3:-41267279 None:intergenic
CGAGTCTCATCTCTCGCAGG+TGG 0.671427 8.3:+41267363 MS.gene34753:CDS
CCTCCCAACCAAAACCTCCG+TGG 0.681514 8.3:+41267334 MS.gene34753:CDS
GTATATCACCATTATCTCGG+AGG 0.699336 8.3:-41268904 None:intergenic
AGTCCAAGAGAAATTTACGC+CGG 0.700247 8.3:-41268723 None:intergenic
CCACAAATTCACTTTCACGG+CGG 0.708942 8.3:-41268865 None:intergenic
AGATTAACTGATATACCAAG+GGG 0.721766 8.3:+41269522 MS.gene34753:CDS
ATTCGACAACATAGACACTG+TGG 0.735102 8.3:+41268583 MS.gene34753:CDS
ATTCGACATAGGCAACACTG+TGG 0.759166 8.3:+41268559 MS.gene34753:CDS
GAGACTCGTCGTCGCCACGG+AGG 0.766610 8.3:-41267348 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTATCTGTAAAATT+AGG + chr8.3:41267849-41267868 MS.gene34753:intron 10.0%
!!! GCTTTATTTAAATTAATTTT+TGG + chr8.3:41269199-41269218 MS.gene34753:intron 10.0%
!!! TTTTAATAATATCCAAAATA+TGG + chr8.3:41268364-41268383 MS.gene34753:intron 10.0%
!! TATTTACCAACATAAAAAAT+AGG - chr8.3:41268136-41268155 None:intergenic 15.0%
!! TGAAACTAAAAAAAACTAAA+AGG + chr8.3:41268061-41268080 MS.gene34753:intron 15.0%
!!! ACTTGATTTTATAATGTTAT+TGG + chr8.3:41267820-41267839 MS.gene34753:intron 15.0%
!!! AGTTTTTTTTAGTTTCAAAT+TGG - chr8.3:41268058-41268077 None:intergenic 15.0%
!!! TTTATGTTGGTAAATAAAAA+TGG + chr8.3:41268140-41268159 MS.gene34753:intron 15.0%
!! TGTAAAATTAGGATTGAATT+GGG + chr8.3:41267860-41267879 MS.gene34753:intron 20.0%
! AAAAACTAAAAGGACTAATC+TGG + chr8.3:41268071-41268090 MS.gene34753:intron 25.0%
! AAGATTAACTGATATACCAA+GGG + chr8.3:41269521-41269540 MS.gene34753:CDS 25.0%
! ATATCCTTCTATGTGAATAA+AGG - chr8.3:41269379-41269398 None:intergenic 25.0%
! CTGTAAAATTAGGATTGAAT+TGG + chr8.3:41267859-41267878 MS.gene34753:intron 25.0%
! GAAAATGTATGTAAGTAATC+AGG + chr8.3:41267895-41267914 MS.gene34753:intron 25.0%
! TGATGTAAATTGCAAAATTC+TGG - chr8.3:41269078-41269097 None:intergenic 25.0%
! TTGATTTAGAAACTGATCAT+GGG - chr8.3:41268260-41268279 None:intergenic 25.0%
!! AATTCTGGATAATTTAGAAC+AGG - chr8.3:41269063-41269082 None:intergenic 25.0%
!! ATTCTGGATAATTTAGAACA+GGG - chr8.3:41269062-41269081 None:intergenic 25.0%
!!! AAGGTGAAGTTTTATCATTA+TGG + chr8.3:41268953-41268972 MS.gene34753:intron 25.0%
!!! ACATTTGATTTGCCATATTT+TGG - chr8.3:41268379-41268398 None:intergenic 25.0%
!!! ATTTCGCCTATTTTTTATGT+TGG + chr8.3:41268127-41268146 MS.gene34753:intron 25.0%
!!! TCCACATAAACACTTTTTAA+CGG - chr8.3:41267750-41267769 None:intergenic 25.0%
!!! TTGCTATTTTTGAAAGTATG+TGG + chr8.3:41268167-41268186 MS.gene34753:intron 25.0%
AATTTCAACCTCTTGAAGAA+AGG - chr8.3:41268701-41268720 None:intergenic 30.0%
AGAATCTTGCCAAATTCTTA+AGG - chr8.3:41268340-41268359 None:intergenic 30.0%
AGATTAACTGATATACCAAG+GGG + chr8.3:41269522-41269541 MS.gene34753:CDS 30.0%
AGTTTCAACATCTTCAATGA+TGG - chr8.3:41268521-41268540 None:intergenic 30.0%
ATTCACATAGAAGGATATCA+AGG + chr8.3:41269381-41269400 MS.gene34753:CDS 30.0%
CAGCTGAATCAAATTTAAGT+TGG - chr8.3:41269560-41269579 None:intergenic 30.0%
GAAGATTAACTGATATACCA+AGG + chr8.3:41269520-41269539 MS.gene34753:CDS 30.0%
GATCAGTTTCTAAATCAACA+GGG + chr8.3:41268262-41268281 MS.gene34753:intron 30.0%
GTTGTATATCACCATTATCT+CGG - chr8.3:41268910-41268929 None:intergenic 30.0%
TAGAACAGTTCTTGTTAGTT+AGG - chr8.3:41269497-41269516 None:intergenic 30.0%
TATGCATCATTTCACATCAA+AGG + chr8.3:41268934-41268953 MS.gene34753:CDS 30.0%
TCAAATGCACCTTAAGAATT+TGG + chr8.3:41268328-41268347 MS.gene34753:intron 30.0%
TCATTGAAGATGTTGAAACT+TGG + chr8.3:41268521-41268540 MS.gene34753:CDS 30.0%
TGATCAGTTTCTAAATCAAC+AGG + chr8.3:41268261-41268280 MS.gene34753:intron 30.0%
TGTATGTAAGTAATCAGGTT+TGG + chr8.3:41267900-41267919 MS.gene34753:intron 30.0%
TTCAAGAGGTTGAAATTAAC+CGG + chr8.3:41268704-41268723 MS.gene34753:CDS 30.0%
! CGTTCTAAGTCAACTTTAAA+AGG + chr8.3:41267943-41267962 MS.gene34753:intron 30.0%
! GTTGATTTAGAAACTGATCA+TGG - chr8.3:41268261-41268280 None:intergenic 30.0%
! TTCTGGATAATTTAGAACAG+GGG - chr8.3:41269061-41269080 None:intergenic 30.0%
!! CATTTGCTGAATATGTTTTG+CGG + chr8.3:41269421-41269440 MS.gene34753:CDS 30.0%
!! CTTTTTAACGGAGTTAGTTT+CGG - chr8.3:41267738-41267757 None:intergenic 30.0%
!! TATTTTTGAAAGTATGTGGC+AGG + chr8.3:41268171-41268190 MS.gene34753:intron 30.0%
!! TCCGTTAAAAAGTGTTTATG+TGG + chr8.3:41267746-41267765 MS.gene34753:intron 30.0%
!!! AAACTCTCTAAGATGCATTT+TGG + chr8.3:41268104-41268123 MS.gene34753:intron 30.0%
!!! CGTTTTTTTCGATACATCAA+TGG + chr8.3:41269470-41269489 MS.gene34753:CDS 30.0%
AGAGAGAGATATACATACAC+AGG - chr8.3:41269233-41269252 None:intergenic 35.0%
AGAGTATATGTAAGAGGAGT+GGG - chr8.3:41267310-41267329 None:intergenic 35.0%
CTGACCTTTATTCACATAGA+AGG + chr8.3:41269372-41269391 MS.gene34753:CDS 35.0%
CTTCTATGTGAATAAAGGTC+AGG - chr8.3:41269374-41269393 None:intergenic 35.0%
GATGGAAGATGAATTGAAGA+AGG - chr8.3:41268503-41268522 None:intergenic 35.0%
GTCTTCAAATAGATTCTGAC+TGG + chr8.3:41268747-41268766 MS.gene34753:CDS 35.0%
TATGTGAATAAAGGTCAGGT+GGG - chr8.3:41269370-41269389 None:intergenic 35.0%
TCATTACTTGTCTTTCTCTC+TGG + chr8.3:41268608-41268627 MS.gene34753:CDS 35.0%
TCTCTTAATTCAGAGTAGCA+AGG + chr8.3:41269173-41269192 MS.gene34753:CDS 35.0%
TTAAGAGAACTTGAAGCACA+TGG - chr8.3:41269161-41269180 None:intergenic 35.0%
! AACCATCACCTTTAAGAACA+TGG + chr8.3:41269307-41269326 MS.gene34753:CDS 35.0%
! ACAATCTAGAGTTTCGAGTA+CGG - chr8.3:41268639-41268658 None:intergenic 35.0%
! ACCATCACCTTTAAGAACAT+GGG + chr8.3:41269308-41269327 MS.gene34753:CDS 35.0%
! AGGTGGGATTTGAAACATTT+AGG - chr8.3:41269354-41269373 None:intergenic 35.0%
! TGAAAAAACTGCAGTCTTGT+TGG + chr8.3:41268455-41268474 MS.gene34753:intron 35.0%
!! ACAAACAGTTCTTCAAGTTG+AGG - chr8.3:41267611-41267630 None:intergenic 35.0%
!! ACGATTATTGCTAAGTTGGT+AGG + chr8.3:41267769-41267788 MS.gene34753:intron 35.0%
!! TGTCTTTTGTGCTAGTTTCT+TGG + chr8.3:41268658-41268677 MS.gene34753:CDS 35.0%
!! TTAGGAACTGTTGTTGACTT+TGG - chr8.3:41269336-41269355 None:intergenic 35.0%
AAAAAGTTTCGTCTCACCAG+CGG + chr8.3:41267521-41267540 MS.gene34753:CDS 40.0%
AAAACCACATTGGGCATCAT+TGG + chr8.3:41268800-41268819 MS.gene34753:CDS 40.0%
AAACGAGATAGGTGCAATCA+AGG - chr8.3:41267685-41267704 None:intergenic 40.0%
AACGTCCAAGAATGTTCAGA+AGG + chr8.3:41267447-41267466 MS.gene34753:CDS 40.0%
ACAACAAGTAGACTTACCTG+AGG - chr8.3:41267709-41267728 None:intergenic 40.0%
AGAAGACTCATGTTGAAGCT+GGG - chr8.3:41269117-41269136 None:intergenic 40.0%
AGTCCAAGAGAAATTTACGC+CGG - chr8.3:41268726-41268745 None:intergenic 40.0%
ATTCGACAACATAGACACTG+TGG + chr8.3:41268583-41268602 MS.gene34753:CDS 40.0%
CAACAAGTAGACTTACCTGA+GGG - chr8.3:41267708-41267727 None:intergenic 40.0%
CTATGTGAATAAAGGTCAGG+TGG - chr8.3:41269371-41269390 None:intergenic 40.0%
GCAAACCTTCTGAACATTCT+TGG - chr8.3:41267455-41267474 None:intergenic 40.0%
GGTCCACAAATTCACTTTCA+CGG - chr8.3:41268871-41268890 None:intergenic 40.0%
GTACGCATAATCACAAGTGA+TGG - chr8.3:41269019-41269038 None:intergenic 40.0%
GTATATCACCATTATCTCGG+AGG - chr8.3:41268907-41268926 None:intergenic 40.0%
GTCTTGATCGCAGTATTCAA+TGG - chr8.3:41267636-41267655 None:intergenic 40.0%
GTGGACGATTATTGCTAAGT+TGG + chr8.3:41267765-41267784 MS.gene34753:intron 40.0%
TAACCGGCGTAAATTTCTCT+TGG + chr8.3:41268720-41268739 MS.gene34753:CDS 40.0%
TCAAGGATTTGAAGATGAGC+TGG + chr8.3:41269398-41269417 MS.gene34753:CDS 40.0%
TCCCATGTTCTTAAAGGTGA+TGG - chr8.3:41269312-41269331 None:intergenic 40.0%
TTAGAAACTGATCATGGGAC+TGG - chr8.3:41268255-41268274 None:intergenic 40.0%
TTGAATACTGCGATCAAGAC+TGG + chr8.3:41267636-41267655 MS.gene34753:CDS 40.0%
! AATCTAGAGTTTCGAGTACG+GGG - chr8.3:41268637-41268656 None:intergenic 40.0%
! ACGAAACTTTTTGATGTCGC+GGG - chr8.3:41267513-41267532 None:intergenic 40.0%
! CAATCTAGAGTTTCGAGTAC+GGG - chr8.3:41268638-41268657 None:intergenic 40.0%
! GACGAAACTTTTTGATGTCG+CGG - chr8.3:41267514-41267533 None:intergenic 40.0%
! GAGAGTATATGTAAGAGGAG+TGG - chr8.3:41267311-41267330 None:intergenic 40.0%
! GCTGAATATGTTTTGCGGAA+CGG + chr8.3:41269426-41269445 MS.gene34753:CDS 40.0%
! GGAAGGAGAGTATATGTAAG+AGG - chr8.3:41267316-41267335 None:intergenic 40.0%
! TTTGGCTCCCATGTTCTTAA+AGG - chr8.3:41269318-41269337 None:intergenic 40.0%
!! TTGGTGTCATAGACACTTTC+TGG + chr8.3:41267919-41267938 MS.gene34753:intron 40.0%
AAGATGTTGAAACTTGGCGC+AGG + chr8.3:41268527-41268546 MS.gene34753:CDS 45.0%
ATATGTAAGAGGAGTGGGTC+CGG - chr8.3:41267305-41267324 None:intergenic 45.0%
ATTCGACATAGGCAACACTG+TGG + chr8.3:41268559-41268578 MS.gene34753:CDS 45.0%
CACAAATTCACTTTCACGGC+GGG - chr8.3:41268867-41268886 None:intergenic 45.0%
CAGAAGACTCATGTTGAAGC+TGG - chr8.3:41269118-41269137 None:intergenic 45.0%
CAGGTACTCTGATCAAAACG+TGG + chr8.3:41268190-41268209 MS.gene34753:intron 45.0%
CATTGGAAACTTGCAGAGTG+TGG + chr8.3:41268817-41268836 MS.gene34753:CDS 45.0%
CCACAAATTCACTTTCACGG+CGG - chr8.3:41268868-41268887 None:intergenic 45.0%
CCTCTTGAAGAAAGGTGACA+CGG - chr8.3:41268693-41268712 None:intergenic 45.0%
CGACAGATTAAGCACTCTAC+CGG + chr8.3:41267283-41267302 MS.gene34753:CDS 45.0%
CTCTTGAAGAAAGGTGACAC+GGG - chr8.3:41268692-41268711 None:intergenic 45.0%
CTGATCAAAACGTGGTCACT+TGG + chr8.3:41268198-41268217 MS.gene34753:intron 45.0%
GTGATTATGCGTACAAGCAG+TGG + chr8.3:41269025-41269044 MS.gene34753:intron 45.0%
GTGCAATCAAGGAGAGAAGA+AGG - chr8.3:41267674-41267693 None:intergenic 45.0%
GTTTCCAATGATGCCCAATG+TGG - chr8.3:41268807-41268826 None:intergenic 45.0%
TTACCTGAGGGAAACGAGAT+AGG - chr8.3:41267696-41267715 None:intergenic 45.0%
! CGGTAGAGTGCTTAATCTGT+CGG - chr8.3:41267285-41267304 None:intergenic 45.0%
! TAGAGTGCTTAATCTGTCGG+TGG - chr8.3:41267282-41267301 None:intergenic 45.0%
!! TTCTTCAAGTTGAGGCCCAA+TGG - chr8.3:41267603-41267622 None:intergenic 45.0%
AGCACGGGCAAAACCACATT+GGG + chr8.3:41268791-41268810 MS.gene34753:CDS 50.0%
CCGCCGTGAAAGTGAATTTG+TGG + chr8.3:41268865-41268884 MS.gene34753:CDS 50.0%
CCGTGTCACCTTTCTTCAAG+AGG + chr8.3:41268690-41268709 MS.gene34753:CDS 50.0%
CTCAGCTACCTCCGAGATAA+TGG + chr8.3:41268896-41268915 MS.gene34753:CDS 50.0%
GAAAGGTGACACGGGAACAT+TGG - chr8.3:41268684-41268703 None:intergenic 50.0%
GCGGTCTGTTGAATGATGAC+TGG + chr8.3:41267540-41267559 MS.gene34753:CDS 50.0%
GGCGTTGTGGAATTCGACAT+AGG + chr8.3:41268548-41268567 MS.gene34753:CDS 50.0%
GTCATCATTCAACAGACCGC+TGG - chr8.3:41267540-41267559 None:intergenic 50.0%
GTGCTTAATCTGTCGGTGGT+CGG - chr8.3:41267278-41267297 None:intergenic 50.0%
GTTCCTCCTAGCAGCAACAA+GGG - chr8.3:41269290-41269309 None:intergenic 50.0%
TAGCACGGGCAAAACCACAT+TGG + chr8.3:41268790-41268809 MS.gene34753:CDS 50.0%
TAGCGACTGCTTCGAGGTAT+GGG + chr8.3:41267568-41267587 MS.gene34753:CDS 50.0%
TATGGGTTCGTGCTGCCATT+GGG + chr8.3:41267585-41267604 MS.gene34753:CDS 50.0%
TGAGTCGTCGGAGAATTCGA+AGG - chr8.3:41267414-41267433 None:intergenic 50.0%
TGGAAACTTGCAGAGTGTGG+AGG + chr8.3:41268820-41268839 MS.gene34753:CDS 50.0%
TGTAGACGACAGTCGTAGCA+CGG + chr8.3:41268775-41268794 MS.gene34753:CDS 50.0%
TTGTGTCCCTTGTTGCTGCT+AGG + chr8.3:41269281-41269300 MS.gene34753:intron 50.0%
! TTTAGAACAGGGGTGCGAAG+TGG - chr8.3:41269051-41269070 None:intergenic 50.0%
! TTTTGATGTCGCGGGATCGA+CGG - chr8.3:41267505-41267524 None:intergenic 50.0%
CGATCAAGACTGGCAAGTGC+TGG + chr8.3:41267646-41267665 MS.gene34753:CDS 55.0%
CGTCGGAGAATTCGAAGGCT+TGG - chr8.3:41267409-41267428 None:intergenic 55.0%
CTTAATCTGTCGGTGGTCGG+CGG - chr8.3:41267275-41267294 None:intergenic 55.0%
GCACCTATCTCGTTTCCCTC+AGG + chr8.3:41267690-41267709 MS.gene34753:CDS 55.0%
GGTTCCTCCTAGCAGCAACA+AGG - chr8.3:41269291-41269310 None:intergenic 55.0%
GTAGACGACAGTCGTAGCAC+GGG + chr8.3:41268776-41268795 MS.gene34753:CDS 55.0%
GTAGCGACTGCTTCGAGGTA+TGG + chr8.3:41267567-41267586 MS.gene34753:CDS 55.0%
GTATGGGTTCGTGCTGCCAT+TGG + chr8.3:41267584-41267603 MS.gene34753:CDS 55.0%
GTTTCGTAGCGACTGCTTCG+AGG + chr8.3:41267562-41267581 MS.gene34753:CDS 55.0%
TCCGACGACTCACACGAAGA+CGG + chr8.3:41267422-41267441 MS.gene34753:CDS 55.0%
TGTCCCTTGTTGCTGCTAGG+AGG + chr8.3:41269284-41269303 MS.gene34753:intron 55.0%
!!! GGAGGTTTTGGTTGGGAGGA+AGG - chr8.3:41267333-41267352 None:intergenic 55.0%
!!! TCGCCACGGAGGTTTTGGTT+GGG - chr8.3:41267340-41267359 None:intergenic 55.0%
CCTCCCAACCAAAACCTCCG+TGG + chr8.3:41267334-41267353 MS.gene34753:CDS 60.0%
CGACGAGTCTCATCTCTCGC+AGG + chr8.3:41267360-41267379 MS.gene34753:CDS 60.0%
CGAGTCTCATCTCTCGCAGG+TGG + chr8.3:41267363-41267382 MS.gene34753:CDS 60.0%
CTCGCAGGTGGCGAAATCTC+TGG + chr8.3:41267375-41267394 MS.gene34753:CDS 60.0%
CTCGGAGGTAGCTGAGCACA+GGG - chr8.3:41268892-41268911 None:intergenic 60.0%
GATGAGACTCGTCGTCGCCA+CGG - chr8.3:41267354-41267373 None:intergenic 60.0%
GCCGTCTTCGTGTGAGTCGT+CGG - chr8.3:41267426-41267445 None:intergenic 60.0%
TCTCGGAGGTAGCTGAGCAC+AGG - chr8.3:41268893-41268912 None:intergenic 60.0%
TGGCATCTGACAGAGCCCCT+TGG - chr8.3:41269540-41269559 None:intergenic 60.0%
! GAAACTTGGCGCAGGCGTTG+TGG + chr8.3:41268535-41268554 MS.gene34753:CDS 60.0%
!! GTCGCCACGGAGGTTTTGGT+TGG - chr8.3:41267341-41267360 None:intergenic 60.0%
!!! CCACGGAGGTTTTGGTTGGG+AGG - chr8.3:41267337-41267356 None:intergenic 60.0%
GATGTCGCGGGATCGACGGA+GGG - chr8.3:41267501-41267520 None:intergenic 65.0%
GGATCGACGGAGGGAGAGCA+CGG - chr8.3:41267492-41267511 None:intergenic 65.0%
TGATGTCGCGGGATCGACGG+AGG - chr8.3:41267502-41267521 None:intergenic 65.0%
! CGTCGTCGCCACGGAGGTTT+TGG - chr8.3:41267345-41267364 None:intergenic 65.0%
GAGACTCGTCGTCGCCACGG+AGG - chr8.3:41267351-41267370 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 41267266 41269590 41267266 ID=MS.gene34753
chr8.3 mRNA 41267266 41269590 41267266 ID=MS.gene34753.t1;Parent=MS.gene34753
chr8.3 exon 41267266 41267711 41267266 ID=MS.gene34753.t1.exon1;Parent=MS.gene34753.t1
chr8.3 CDS 41267266 41267711 41267266 ID=cds.MS.gene34753.t1;Parent=MS.gene34753.t1
chr8.3 exon 41268469 41268955 41268469 ID=MS.gene34753.t1.exon2;Parent=MS.gene34753.t1
chr8.3 CDS 41268469 41268955 41268469 ID=cds.MS.gene34753.t1;Parent=MS.gene34753.t1
chr8.3 exon 41269045 41269194 41269045 ID=MS.gene34753.t1.exon3;Parent=MS.gene34753.t1
chr8.3 CDS 41269045 41269194 41269045 ID=cds.MS.gene34753.t1;Parent=MS.gene34753.t1
chr8.3 exon 41269303 41269590 41269303 ID=MS.gene34753.t1.exon4;Parent=MS.gene34753.t1
chr8.3 CDS 41269303 41269590 41269303 ID=cds.MS.gene34753.t1;Parent=MS.gene34753.t1
Gene Sequence

>MS.gene34753

ATGGCGCCGCCGACCACCGACAGATTAAGCACTCTACCGGACCCACTCCTCTTACATATACTCTCCTTCCTCCCAACCAAAACCTCCGTGGCGACGACGAGTCTCATCTCTCGCAGGTGGCGAAATCTCTGGCAGAATCTCCAAGCCTTCGAATTCTCCGACGACTCACACGAAGACGGCAAACGTCCAAGAATGTTCAGAAGGTTTGCATTCTTCGTCAACGCCGTGCTCTCCCTCCGTCGATCCCGCGACATCAAAAAGTTTCGTCTCACCAGCGGTCTGTTGAATGATGACTGGTTTCGTAGCGACTGCTTCGAGGTATGGGTTCGTGCTGCCATTGGGCCTCAACTTGAAGAACTGTTTGTTTCCATTGAATACTGCGATCAAGACTGGCAAGTGCTGGTTCCTTCTTCTCTCCTTGATTGCACCTATCTCGTTTCCCTCAGGTAAGTCTACTTGTTGTAAGTTACCGAAACTAACTCCGTTAAAAAGTGTTTATGTGGACGATTATTGCTAAGTTGGTAGGTCTAAATTCACTGCTCACAAAATTGATTACTTGATTTTATAATGTTATTGGTGAAATATTTATTTATCTGTAAAATTAGGATTGAATTGGGAAACAATGAGAAGAAAATGTATGTAAGTAATCAGGTTTGGTGTCATAGACACTTTCTGGACGTTCTAAGTCAACTTTAAAAGGTTATGCAAGCACTTTTTAACAAAGTTTGATGAAAAAATGATCAATATGTTACAAAAAAGAAAATTAAATGTCTAAGTTGTTCAATTTTACCAATTTGAAACTAAAAAAAACTAAAAGGACTAATCTGGCAAAAACGTTAAACTCTCTAAGATGCATTTTGGATTTCGCCTATTTTTTATGTTGGTAAATAAAAATGGTATTTTGCTATTTTTGAAAGTATGTGGCAGGTACTCTGATCAAAACGTGGTCACTTGGTTTAGCGAGTGACAAGAGTTCTTGTTTTTGTCCAGTCCCATGATCAGTTTCTAAATCAACAGGGTACAGAAAAAGTTGTACAGTTCAGTTCTCTGTATTTTAGCAAATCAAATGCACCTTAAGAATTTGGCAAGATTCTCACGTTTTAATAATATCCAAAATATGGCAAATCAAATGTTCAGTTCTCTCTCTGTTTTTAATATGTATATATAGAATGTTATGTAACATGTGTTTTGAAAAAACTGCAGTCTTGTTGGTGCAATTCATATAATGTTTCAACCTTCTTCAATTCATCTTCCATCATTGAAGATGTTGAAACTTGGCGCAGGCGTTGTGGAATTCGACATAGGCAACACTGTGGAATTCGACAACATAGACACTGTGGATTCATTACTTGTCTTTCTCTCTGGCTGCCCCGTACTCGAAACTCTAGATTGTGTCTTTTGTGCTAGTTTCTTGGCCAATGTTCCCGTGTCACCTTTCTTCAAGAGGTTGAAATTAACCGGCGTAAATTTCTCTTGGACTCGTCTTCAAATAGATTCTGACTGGCTCTGTGTAGACGACAGTCGTAGCACGGGCAAAACCACATTGGGCATCATTGGAAACTTGCAGAGTGTGGAGGAAGCATATTTTGATGTCTTTTCCCGCCGTGAAAGTGAATTTGTGGACCCTGTGCTCAGCTACCTCCGAGATAATGGTGATATACAACTACTTATGCATCATTTCACATCAAAGGTGAAGTTTTATCATTATGGTTTATATGTATTATATATGTACTTCTGTACTAATGTTGTGCCATCACTTGTGATTATGCGTACAAGCAGTGGCCACTTCGCACCCCTGTTCTAAATTATCCAGAATTTTGCAATTTACATCATCTAAAGTTCATTCTTCCCAGCTTCAACATGAGTCTTCTGCTCAACGTGCTTGAGAAATGCCATGTGCTTCAAGTTCTCTTAATTCAGAGTAGCAAGGTTTGCTTTATTTAAATTAATTTTTGGTCTATCTACCTGTGTATGTATATCTCTCTCTCTATATACACACAAATATAATTGAGTCATTGTGTCCCTTGTTGCTGCTAGGAGGAACCATCACCTTTAAGAACATGGGAGCCAAAGTCAACAACAGTTCCTAAATGTTTCAAATCCCACCTGACCTTTATTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGCTGAATATGTTTTGCGGAACGGACTTGTTTTACACACAATGCTCGTTTTTTTCGATACATCAATGGACCTAACTAACAAGAACTGTTCTATCAGAAGATTAACTGATATACCAAGGGGCTCTGTCAGATGCCAACTTAAATTTGATTCAGCTGTGTCTCCATAA

Protein sequence

>MS.gene34753.t1

MAPPTTDRLSTLPDPLLLHILSFLPTKTSVATTSLISRRWRNLWQNLQAFEFSDDSHEDGKRPRMFRRFAFFVNAVLSLRRSRDIKKFRLTSGLLNDDWFRSDCFEVWVRAAIGPQLEELFVSIEYCDQDWQVLVPSSLLDCTYLVSLSLVGAIHIMFQPSSIHLPSLKMLKLGAGVVEFDIGNTVEFDNIDTVDSLLVFLSGCPVLETLDCVFCASFLANVPVSPFFKRLKLTGVNFSWTRLQIDSDWLCVDDSRSTGKTTLGIIGNLQSVEEAYFDVFSRRESEFVDPVLSYLRDNGDIQLLMHHFTSKWPLRTPVLNYPEFCNLHHLKFILPSFNMSLLLNVLEKCHVLQVLLIQSSKEEPSPLRTWEPKSTTVPKCFKSHLTFIHIEGYQGFEDELAFAEYVLRNGLVLHTMLVFFDTSMDLTNKNCSIRRLTDIPRGSVRCQLKFDSAVSP