Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72959.t1 | XP_013445781.1 | 79 | 415 | 84 | 2 | 1 | 414 | 51 | 463 | 1.80E-180 | 642.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72959.t1 | Q8H1R7 | 27.6 | 424 | 264 | 14 | 2 | 414 | 28 | 419 | 8.9e-24 | 112.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72959.t1 | A0A072TQY2 | 79.0 | 415 | 84 | 2 | 1 | 414 | 51 | 463 | 1.3e-180 | 642.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72959.t1 | MTR_8g468810 | 79.036 | 415 | 84 | 2 | 1 | 414 | 51 | 463 | 0.0 | 655 |
MS.gene72959.t1 | MTR_8g468810 | 81.734 | 323 | 56 | 2 | 1 | 322 | 51 | 371 | 0.0 | 521 |
MS.gene72959.t1 | MTR_8g058970 | 62.587 | 433 | 143 | 3 | 1 | 414 | 45 | 477 | 0.0 | 517 |
MS.gene72959.t1 | MTR_8g468810 | 82.510 | 263 | 44 | 1 | 1 | 263 | 51 | 311 | 1.82e-151 | 432 |
MS.gene72959.t1 | MTR_8g468810 | 82.510 | 263 | 44 | 1 | 1 | 263 | 51 | 311 | 3.15e-151 | 431 |
MS.gene72959.t1 | MTR_8g468810 | 82.510 | 263 | 44 | 1 | 1 | 263 | 51 | 311 | 5.56e-151 | 432 |
MS.gene72959.t1 | MTR_2g083840 | 54.306 | 418 | 180 | 6 | 1 | 414 | 47 | 457 | 1.47e-141 | 412 |
MS.gene72959.t1 | MTR_8g062270 | 47.552 | 429 | 193 | 11 | 1 | 413 | 41 | 453 | 1.19e-115 | 345 |
MS.gene72959.t1 | MTR_4g032730 | 47.045 | 440 | 188 | 9 | 3 | 413 | 43 | 466 | 2.47e-114 | 342 |
MS.gene72959.t1 | MTR_5g092960 | 49.767 | 430 | 182 | 13 | 3 | 413 | 47 | 461 | 1.12e-109 | 330 |
MS.gene72959.t1 | MTR_8g468840 | 47.619 | 420 | 200 | 9 | 2 | 412 | 40 | 448 | 2.19e-109 | 329 |
MS.gene72959.t1 | MTR_8g468760 | 48.712 | 427 | 163 | 13 | 1 | 413 | 34 | 418 | 5.49e-107 | 322 |
MS.gene72959.t1 | MTR_8g467800 | 48.009 | 427 | 189 | 12 | 2 | 414 | 46 | 453 | 1.47e-106 | 322 |
MS.gene72959.t1 | MTR_8g014260 | 43.735 | 423 | 211 | 15 | 4 | 414 | 44 | 451 | 3.49e-97 | 298 |
MS.gene72959.t1 | MTR_8g445780 | 44.536 | 366 | 181 | 9 | 4 | 364 | 41 | 389 | 2.18e-82 | 258 |
MS.gene72959.t1 | MTR_5g092960 | 50.599 | 334 | 142 | 10 | 3 | 322 | 47 | 371 | 1.36e-79 | 251 |
MS.gene72959.t1 | MTR_8g469020 | 38.337 | 433 | 232 | 12 | 2 | 414 | 34 | 451 | 4.58e-78 | 249 |
MS.gene72959.t1 | MTR_8g058965 | 39.019 | 428 | 235 | 10 | 2 | 414 | 40 | 456 | 3.93e-76 | 244 |
MS.gene72959.t1 | MTR_8g070950 | 37.875 | 433 | 211 | 15 | 1 | 414 | 41 | 434 | 1.62e-70 | 229 |
MS.gene72959.t1 | MTR_4g050250 | 40.576 | 382 | 191 | 10 | 1 | 356 | 47 | 418 | 5.20e-68 | 222 |
MS.gene72959.t1 | MTR_8g467800 | 51.852 | 270 | 118 | 6 | 2 | 266 | 46 | 308 | 1.08e-67 | 218 |
MS.gene72959.t1 | MTR_8g062080 | 36.706 | 425 | 230 | 14 | 1 | 414 | 49 | 445 | 7.84e-64 | 212 |
MS.gene72959.t1 | MTR_8g062010 | 36.993 | 419 | 236 | 12 | 1 | 414 | 35 | 430 | 8.12e-64 | 211 |
MS.gene72959.t1 | MTR_8g014160 | 33.886 | 422 | 207 | 11 | 2 | 414 | 67 | 425 | 1.08e-59 | 200 |
MS.gene72959.t1 | MTR_4g024710 | 42.193 | 301 | 160 | 8 | 117 | 414 | 58 | 347 | 2.13e-58 | 194 |
MS.gene72959.t1 | MTR_8g062310 | 35.817 | 416 | 221 | 14 | 4 | 414 | 54 | 428 | 1.43e-57 | 195 |
MS.gene72959.t1 | MTR_8g062300 | 34.744 | 449 | 235 | 16 | 1 | 414 | 52 | 477 | 2.64e-54 | 187 |
MS.gene72959.t1 | MTR_4g024745 | 41.259 | 286 | 154 | 8 | 115 | 397 | 10 | 284 | 3.40e-48 | 166 |
MS.gene72959.t1 | MTR_8g014210 | 43.568 | 241 | 126 | 6 | 174 | 414 | 1 | 231 | 2.16e-46 | 159 |
MS.gene72959.t1 | MTR_8g467790 | 34.417 | 369 | 176 | 13 | 1 | 354 | 174 | 491 | 8.08e-45 | 162 |
MS.gene72959.t1 | MTR_8g077460 | 41.969 | 193 | 106 | 4 | 4 | 191 | 38 | 229 | 1.01e-36 | 138 |
MS.gene72959.t1 | MTR_8g077460 | 33.209 | 268 | 150 | 9 | 155 | 414 | 129 | 375 | 3.17e-29 | 117 |
MS.gene72959.t1 | MTR_5g021550 | 50.000 | 116 | 55 | 3 | 4 | 116 | 47 | 162 | 2.50e-27 | 107 |
MS.gene72959.t1 | MTR_8g014290 | 43.548 | 124 | 59 | 5 | 4 | 117 | 38 | 160 | 1.19e-23 | 96.7 |
MS.gene72959.t1 | MTR_2g086020 | 28.297 | 417 | 194 | 14 | 1 | 414 | 1 | 315 | 1.38e-23 | 100 |
MS.gene72959.t1 | MTR_4g056040 | 29.630 | 405 | 237 | 16 | 13 | 388 | 65 | 450 | 5.76e-23 | 101 |
MS.gene72959.t1 | MTR_5g080710 | 27.594 | 424 | 266 | 15 | 2 | 413 | 59 | 453 | 6.21e-23 | 100 |
MS.gene72959.t1 | MTR_4g113810 | 36.471 | 170 | 101 | 5 | 57 | 221 | 1 | 168 | 1.70e-21 | 91.3 |
MS.gene72959.t1 | MTR_4g055990 | 28.610 | 374 | 224 | 14 | 41 | 389 | 106 | 461 | 1.04e-20 | 94.4 |
MS.gene72959.t1 | MTR_4g055990 | 28.610 | 374 | 224 | 14 | 41 | 389 | 106 | 461 | 1.16e-20 | 94.4 |
MS.gene72959.t1 | MTR_4g056070 | 29.600 | 375 | 213 | 16 | 17 | 364 | 86 | 436 | 1.76e-20 | 93.2 |
MS.gene72959.t1 | MTR_5g084070 | 27.273 | 385 | 238 | 14 | 2 | 376 | 39 | 391 | 1.07e-19 | 90.9 |
MS.gene72959.t1 | MTR_8g014220 | 42.975 | 121 | 57 | 5 | 46 | 161 | 47 | 160 | 1.99e-17 | 79.7 |
MS.gene72959.t1 | MTR_4g056030 | 28.493 | 365 | 211 | 15 | 41 | 378 | 69 | 410 | 2.72e-17 | 84.0 |
MS.gene72959.t1 | MTR_4g056020 | 28.371 | 356 | 225 | 14 | 41 | 379 | 69 | 411 | 2.37e-16 | 80.9 |
MS.gene72959.t1 | MTR_4g024720 | 36.567 | 134 | 62 | 6 | 4 | 116 | 45 | 176 | 5.12e-16 | 76.6 |
MS.gene72959.t1 | MTR_4g055580 | 27.671 | 365 | 208 | 14 | 44 | 378 | 199 | 537 | 2.06e-15 | 78.6 |
MS.gene72959.t1 | MTR_1g038710 | 26.705 | 352 | 227 | 11 | 48 | 378 | 85 | 426 | 4.01e-15 | 77.4 |
MS.gene72959.t1 | MTR_1g041245 | 32.544 | 169 | 97 | 4 | 2 | 166 | 37 | 192 | 2.30e-14 | 74.7 |
MS.gene72959.t1 | MTR_1g041245 | 32.609 | 138 | 80 | 4 | 286 | 414 | 253 | 386 | 9.08e-11 | 63.5 |
MS.gene72959.t1 | MTR_8g014230 | 48.000 | 75 | 35 | 2 | 330 | 404 | 25 | 95 | 3.41e-12 | 63.2 |
MS.gene72959.t1 | MTR_2g072720 | 23.666 | 431 | 274 | 14 | 2 | 401 | 65 | 471 | 1.66e-11 | 66.2 |
MS.gene72959.t1 | MTR_7g115270 | 22.353 | 425 | 252 | 14 | 2 | 411 | 38 | 399 | 4.17e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72959.t1 | AT4G26340 | 28.337 | 427 | 257 | 16 | 2 | 414 | 28 | 419 | 1.41e-26 | 110 |
MS.gene72959.t1 | AT1G78750 | 26.682 | 431 | 276 | 15 | 2 | 411 | 44 | 455 | 8.65e-23 | 100 |
MS.gene72959.t1 | AT1G78750 | 26.682 | 431 | 276 | 15 | 2 | 411 | 44 | 455 | 8.65e-23 | 100 |
MS.gene72959.t1 | AT5G38590 | 27.436 | 390 | 231 | 14 | 2 | 376 | 28 | 380 | 3.53e-20 | 92.4 |
MS.gene72959.t1 | AT1G66300 | 28.409 | 440 | 242 | 21 | 3 | 411 | 56 | 453 | 6.72e-20 | 91.7 |
MS.gene72959.t1 | AT4G13985 | 26.018 | 442 | 267 | 18 | 1 | 411 | 44 | 456 | 8.85e-20 | 91.7 |
MS.gene72959.t1 | AT1G51370 | 27.315 | 432 | 248 | 23 | 2 | 411 | 45 | 432 | 2.01e-19 | 90.1 |
MS.gene72959.t1 | AT5G56420 | 25.229 | 436 | 258 | 18 | 2 | 414 | 32 | 422 | 4.57e-19 | 89.0 |
MS.gene72959.t1 | AT5G56420 | 25.229 | 436 | 258 | 18 | 2 | 414 | 32 | 422 | 4.57e-19 | 89.0 |
MS.gene72959.t1 | AT5G56420 | 25.229 | 436 | 258 | 18 | 2 | 414 | 32 | 422 | 4.57e-19 | 89.0 |
MS.gene72959.t1 | AT1G66290 | 27.064 | 436 | 252 | 21 | 2 | 411 | 55 | 450 | 8.26e-19 | 88.6 |
MS.gene72959.t1 | AT5G56370 | 26.728 | 434 | 255 | 19 | 2 | 413 | 28 | 420 | 2.35e-18 | 87.0 |
MS.gene72959.t1 | AT5G56370 | 26.728 | 434 | 255 | 19 | 2 | 413 | 28 | 420 | 2.35e-18 | 87.0 |
MS.gene72959.t1 | AT3G50710 | 25.866 | 433 | 266 | 17 | 3 | 414 | 29 | 427 | 3.39e-18 | 86.7 |
MS.gene72959.t1 | AT5G22730 | 27.815 | 453 | 241 | 22 | 2 | 411 | 54 | 463 | 6.97e-18 | 85.9 |
MS.gene72959.t1 | AT5G22730 | 27.815 | 453 | 241 | 22 | 2 | 411 | 54 | 463 | 6.97e-18 | 85.9 |
MS.gene72959.t1 | AT1G32375 | 26.157 | 432 | 261 | 17 | 3 | 414 | 29 | 422 | 9.71e-18 | 85.1 |
MS.gene72959.t1 | AT1G32375 | 26.157 | 432 | 261 | 17 | 3 | 414 | 29 | 422 | 9.71e-18 | 85.1 |
MS.gene72959.t1 | AT5G38570 | 26.128 | 421 | 227 | 16 | 3 | 413 | 29 | 375 | 1.28e-17 | 84.3 |
MS.gene72959.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 2.58e-17 | 83.6 |
MS.gene72959.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 2.58e-17 | 83.6 |
MS.gene72959.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 2.58e-17 | 83.6 |
MS.gene72959.t1 | AT3G54910 | 26.923 | 390 | 241 | 13 | 36 | 414 | 17 | 373 | 5.58e-17 | 82.4 |
MS.gene72959.t1 | AT3G54910 | 26.923 | 390 | 241 | 13 | 36 | 414 | 17 | 373 | 5.58e-17 | 82.4 |
MS.gene72959.t1 | AT3G54910 | 26.923 | 390 | 241 | 13 | 36 | 414 | 17 | 373 | 5.58e-17 | 82.4 |
MS.gene72959.t1 | AT1G06630 | 29.496 | 278 | 169 | 10 | 2 | 266 | 38 | 301 | 1.56e-16 | 80.1 |
MS.gene72959.t1 | AT5G38590 | 30.126 | 239 | 146 | 9 | 2 | 233 | 28 | 252 | 1.59e-16 | 80.1 |
MS.gene72959.t1 | AT1G06630 | 28.228 | 333 | 206 | 12 | 2 | 319 | 38 | 352 | 1.73e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.228 | 333 | 206 | 12 | 2 | 319 | 38 | 352 | 1.73e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 47 | 362 | 2.32e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 38 | 353 | 2.42e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 38 | 353 | 2.42e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 38 | 353 | 2.42e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 38 | 353 | 2.42e-16 | 80.9 |
MS.gene72959.t1 | AT1G06630 | 28.144 | 334 | 207 | 12 | 2 | 320 | 38 | 353 | 3.05e-16 | 80.9 |
MS.gene72959.t1 | AT5G60610 | 25.935 | 401 | 234 | 15 | 2 | 380 | 28 | 387 | 3.47e-16 | 80.1 |
MS.gene72959.t1 | AT5G60610 | 25.935 | 401 | 234 | 15 | 2 | 380 | 28 | 387 | 3.47e-16 | 80.1 |
MS.gene72959.t1 | AT5G22720 | 27.174 | 460 | 243 | 22 | 2 | 413 | 49 | 464 | 1.49e-15 | 78.6 |
MS.gene72959.t1 | AT5G22670 | 29.759 | 373 | 213 | 19 | 30 | 376 | 58 | 407 | 2.33e-15 | 78.2 |
MS.gene72959.t1 | AT1G55660 | 24.130 | 431 | 286 | 17 | 2 | 411 | 79 | 489 | 4.03e-15 | 77.4 |
MS.gene72959.t1 | AT3G58920 | 23.729 | 472 | 270 | 18 | 2 | 414 | 28 | 468 | 6.58e-15 | 76.6 |
MS.gene72959.t1 | AT4G10420 | 25.723 | 346 | 222 | 13 | 77 | 413 | 2 | 321 | 1.69e-14 | 74.3 |
MS.gene72959.t1 | AT5G56700 | 26.862 | 376 | 230 | 17 | 14 | 375 | 2 | 346 | 1.82e-14 | 74.7 |
MS.gene72959.t1 | AT5G53840 | 24.764 | 424 | 275 | 17 | 2 | 411 | 44 | 437 | 3.59e-14 | 74.3 |
MS.gene72959.t1 | AT5G44950 | 27.970 | 404 | 239 | 20 | 2 | 380 | 30 | 406 | 6.62e-14 | 73.6 |
MS.gene72959.t1 | AT3G52680 | 25.172 | 437 | 267 | 18 | 2 | 414 | 47 | 447 | 6.69e-14 | 73.6 |
MS.gene72959.t1 | AT5G56440 | 24.654 | 434 | 273 | 18 | 2 | 413 | 28 | 429 | 1.08e-13 | 72.8 |
MS.gene72959.t1 | AT2G26030 | 26.829 | 451 | 252 | 23 | 2 | 411 | 30 | 443 | 1.74e-13 | 72.4 |
MS.gene72959.t1 | AT5G56810 | 26.914 | 431 | 254 | 18 | 2 | 411 | 41 | 431 | 1.86e-13 | 72.0 |
MS.gene72959.t1 | AT5G38590 | 30.808 | 198 | 125 | 6 | 41 | 233 | 27 | 217 | 2.15e-13 | 70.1 |
MS.gene72959.t1 | AT2G26860 | 25.899 | 417 | 237 | 19 | 2 | 385 | 28 | 405 | 2.52e-13 | 71.6 |
MS.gene72959.t1 | AT2G26860 | 25.899 | 417 | 237 | 19 | 2 | 385 | 28 | 405 | 2.52e-13 | 71.6 |
MS.gene72959.t1 | AT1G55660 | 27.778 | 216 | 144 | 7 | 2 | 212 | 79 | 287 | 3.79e-13 | 70.9 |
MS.gene72959.t1 | AT1G22000 | 25.459 | 381 | 221 | 15 | 2 | 356 | 55 | 398 | 4.17e-13 | 71.2 |
MS.gene72959.t1 | AT5G56390 | 24.709 | 429 | 271 | 14 | 3 | 413 | 30 | 424 | 4.64e-13 | 70.9 |
MS.gene72959.t1 | AT4G00315 | 24.884 | 430 | 284 | 17 | 2 | 411 | 28 | 438 | 6.00e-13 | 70.5 |
MS.gene72959.t1 | AT1G13780 | 26.585 | 410 | 248 | 19 | 2 | 380 | 36 | 423 | 6.37e-13 | 70.5 |
MS.gene72959.t1 | AT5G50270 | 25.123 | 406 | 254 | 17 | 3 | 389 | 30 | 404 | 2.43e-12 | 68.6 |
MS.gene72959.t1 | AT4G14096 | 26.316 | 361 | 230 | 13 | 2 | 344 | 34 | 376 | 3.29e-12 | 68.6 |
MS.gene72959.t1 | AT4G14096 | 26.316 | 361 | 230 | 13 | 2 | 344 | 34 | 376 | 3.29e-12 | 68.6 |
MS.gene72959.t1 | AT3G49480 | 26.115 | 314 | 194 | 12 | 80 | 375 | 114 | 407 | 3.89e-12 | 68.2 |
MS.gene72959.t1 | AT3G26920 | 27.954 | 347 | 216 | 15 | 78 | 413 | 16 | 339 | 5.43e-12 | 67.0 |
MS.gene72959.t1 | AT3G26920 | 27.954 | 347 | 216 | 15 | 78 | 413 | 16 | 339 | 5.43e-12 | 67.0 |
MS.gene72959.t1 | AT5G27750 | 24.289 | 457 | 272 | 18 | 2 | 414 | 31 | 457 | 7.93e-12 | 67.0 |
MS.gene72959.t1 | AT3G54160 | 25.359 | 418 | 254 | 17 | 24 | 412 | 36 | 424 | 7.98e-12 | 67.0 |
MS.gene72959.t1 | AT5G56400 | 24.771 | 436 | 261 | 19 | 4 | 414 | 62 | 455 | 9.14e-12 | 67.0 |
MS.gene72959.t1 | AT1G66310 | 25.455 | 440 | 253 | 22 | 2 | 411 | 45 | 439 | 1.14e-11 | 66.6 |
MS.gene72959.t1 | AT3G49480 | 26.829 | 287 | 176 | 11 | 103 | 375 | 1 | 267 | 1.31e-11 | 65.5 |
MS.gene72959.t1 | AT3G49030 | 25.058 | 431 | 241 | 17 | 2 | 413 | 47 | 414 | 2.63e-11 | 65.5 |
MS.gene72959.t1 | AT3G58860 | 23.227 | 409 | 282 | 13 | 2 | 397 | 33 | 422 | 4.26e-11 | 65.1 |
MS.gene72959.t1 | AT3G10750 | 28.000 | 300 | 169 | 14 | 3 | 295 | 2 | 261 | 4.53e-11 | 63.9 |
MS.gene72959.t1 | AT4G09920 | 29.091 | 275 | 161 | 16 | 2 | 264 | 28 | 280 | 4.83e-11 | 63.9 |
MS.gene72959.t1 | AT4G09920 | 29.091 | 275 | 161 | 16 | 2 | 264 | 28 | 280 | 4.83e-11 | 63.9 |
MS.gene72959.t1 | AT5G56370 | 27.372 | 274 | 168 | 11 | 2 | 269 | 28 | 276 | 6.32e-11 | 63.5 |
MS.gene72959.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 8.16e-11 | 63.2 |
MS.gene72959.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 8.16e-11 | 63.2 |
MS.gene72959.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 8.16e-11 | 63.2 |
MS.gene72959.t1 | AT4G00160 | 25.694 | 432 | 263 | 17 | 2 | 410 | 42 | 438 | 8.30e-11 | 63.9 |
Find 88 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGACCTATATCCACTTTAA+AGG | 0.185801 | 8.3:+41842916 | MS.gene72959:CDS |
CGGTGAGATCTTTGTAGAAT+TGG | 0.284338 | 8.3:+41842047 | MS.gene72959:CDS |
ACGTACCAAAAGAGATTATT+AGG | 0.292927 | 8.3:+41842583 | MS.gene72959:intron |
CCTCTTCTCGTCTGAGGATC+AGG | 0.298567 | 8.3:+41841198 | MS.gene72959:CDS |
CTTGATGTAGTCTCCTCTTC+TGG | 0.309388 | 8.3:+41842384 | MS.gene72959:CDS |
CACCACATCAATTTGGTCTT+AGG | 0.331226 | 8.3:+41842854 | MS.gene72959:CDS |
AAGTGGGATGCAAGACAATT+AGG | 0.332413 | 8.3:-41842895 | None:intergenic |
CTGAATCTTTGGCCAAGCTT+AGG | 0.379532 | 8.3:+41842202 | MS.gene72959:CDS |
GGCAGAGAGAAGGATATTAA+TGG | 0.390004 | 8.3:-41842142 | None:intergenic |
TACGAAGGACCCGCGACATT+CGG | 0.394870 | 8.3:+41841065 | MS.gene72959:CDS |
AGCAAAGTCTTTGAAATGTT+CGG | 0.401003 | 8.3:-41841017 | None:intergenic |
AGTAAATTCAAAACTCTTCA+AGG | 0.409402 | 8.3:-41842235 | None:intergenic |
GGTGAGATCTTTGTAGAATT+GGG | 0.418728 | 8.3:+41842048 | MS.gene72959:CDS |
ACTCTCCTCCAAGCGCTCTC+TGG | 0.418872 | 8.3:+41842432 | MS.gene72959:CDS |
TTCGGCCTCGCCGTCGACGC+CGG | 0.419368 | 8.3:-41840999 | None:intergenic |
TGAATCTTTGGCCAAGCTTA+GGG | 0.420723 | 8.3:+41842203 | MS.gene72959:CDS |
CGTGGATTCGCACCGCCGTT+GGG | 0.424276 | 8.3:+41841149 | MS.gene72959:CDS |
GATACAGCACCACATCAATT+TGG | 0.425006 | 8.3:+41842847 | MS.gene72959:CDS |
AGCCTCACTGATATCACTAT+TGG | 0.428235 | 8.3:+41842315 | MS.gene72959:CDS |
TCGGCCTCGCCGTCGACGCC+GGG | 0.429312 | 8.3:-41840998 | None:intergenic |
CTCATAGGTATCTTCATCTC+TGG | 0.437215 | 8.3:+41840936 | MS.gene72959:CDS |
GGCCAAAGATTCAGTTGAAA+AGG | 0.438596 | 8.3:-41842193 | None:intergenic |
TGAAGTTATCAAGTTGAGAT+TGG | 0.445049 | 8.3:-41841108 | None:intergenic |
AGAGGAGGTTAGTGCATGAT+AGG | 0.446173 | 8.3:-41841243 | None:intergenic |
ATTATAAGAGCTTCAAGTAT+AGG | 0.447586 | 8.3:-41842724 | None:intergenic |
AGTTTCAAAGTTTCTAAGAC+TGG | 0.448465 | 8.3:-41842168 | None:intergenic |
ATTTAACTCCAGAGAGCGCT+TGG | 0.458373 | 8.3:-41842440 | None:intergenic |
TTGGCGATGCCACTTCTGTT+GGG | 0.460446 | 8.3:+41842334 | MS.gene72959:CDS |
ATCCTCTATATCCTTTAAAG+TGG | 0.461419 | 8.3:-41842927 | None:intergenic |
ATCCACTTTAAAGGATATAG+AGG | 0.462211 | 8.3:+41842925 | MS.gene72959:CDS |
TCAAAACTCTTCAAGGAAGA+TGG | 0.465651 | 8.3:-41842228 | None:intergenic |
GCACTAACCTCCTCTCCATC+AGG | 0.467643 | 8.3:+41841251 | MS.gene72959:CDS |
CATCGTAGAAATCAAAAGCT+TGG | 0.471473 | 8.3:-41840967 | None:intergenic |
CAATGAGCCTTGTCTCTCAT+AGG | 0.474674 | 8.3:+41840921 | None:intergenic |
CTTGGAGGAGAGTGAGTAAA+GGG | 0.475202 | 8.3:-41842422 | None:intergenic |
ACGTGGATTCGCACCGCCGT+TGG | 0.482549 | 8.3:+41841148 | MS.gene72959:CDS |
ATTGGCGATGCCACTTCTGT+TGG | 0.491458 | 8.3:+41842333 | MS.gene72959:CDS |
TGTAGAATTGGGACAATCAT+CGG | 0.493103 | 8.3:+41842059 | MS.gene72959:CDS |
ATATCCTTTAAAGTGGATAT+AGG | 0.498926 | 8.3:-41842920 | None:intergenic |
CAAAGTTTCTAAGACTGGAC+AGG | 0.505834 | 8.3:-41842163 | None:intergenic |
TTAAAGGATATAGAGGATGT+TGG | 0.507552 | 8.3:+41842932 | MS.gene72959:CDS |
TAGAGGATGTTGGCTTGAGA+TGG | 0.521759 | 8.3:+41842942 | MS.gene72959:CDS |
AGTTGTAATCTCTTCAATGA+TGG | 0.525654 | 8.3:-41842093 | None:intergenic |
TAGTGATATCAGTGAGGCTA+AGG | 0.528202 | 8.3:-41842311 | None:intergenic |
TTCTACGATGAGTACTCTCC+CGG | 0.531961 | 8.3:+41840980 | MS.gene72959:CDS |
TACAGAAAAGCGTCGAAAGT+AGG | 0.534200 | 8.3:-41842682 | None:intergenic |
CTCTTCTCGTCTGAGGATCA+GGG | 0.539018 | 8.3:+41841199 | MS.gene72959:CDS |
ATCCTCAAGGTACGGCCCAA+CGG | 0.545220 | 8.3:-41841164 | None:intergenic |
CGCCGTTGGGCCGTACCTTG+AGG | 0.554002 | 8.3:+41841162 | MS.gene72959:CDS |
CCTGATCCTCAGACGAGAAG+AGG | 0.554039 | 8.3:-41841198 | None:intergenic |
ACGCATCTTCCGAATGTCGC+GGG | 0.555891 | 8.3:-41841074 | None:intergenic |
GAGTACTCTCCCGGCGTCGA+CGG | 0.563225 | 8.3:+41840989 | MS.gene72959:CDS |
TGTAATGCACACAGTCTCTA+CGG | 0.564381 | 8.3:+41842027 | MS.gene72959:intron |
TCTCGACCTCTTCTCGTCTG+AGG | 0.568024 | 8.3:+41841192 | MS.gene72959:CDS |
AACAGATTCACTTCCAGAAG+AGG | 0.569559 | 8.3:-41842397 | None:intergenic |
TAACTCCAGAGAGCGCTTGG+AGG | 0.571531 | 8.3:-41842437 | None:intergenic |
GCTTGGAGGAGAGTGAGTAA+AGG | 0.575040 | 8.3:-41842423 | None:intergenic |
TAAAGTGGATATAGGTCAAG+TGG | 0.575798 | 8.3:-41842912 | None:intergenic |
GGAAGATGGAACCCTAAGCT+TGG | 0.579963 | 8.3:-41842214 | None:intergenic |
GTGCAAGTTCCCAACAGAAG+TGG | 0.580230 | 8.3:-41842343 | None:intergenic |
AGACTGGACAGGCAGAGAGA+AGG | 0.581233 | 8.3:-41842152 | None:intergenic |
CTGAACGCTCTGTTGACACG+TGG | 0.585988 | 8.3:+41841131 | MS.gene72959:CDS |
AGATGAAGATCCTCAAGGTA+CGG | 0.599815 | 8.3:-41841172 | None:intergenic |
AAGAGATTACAACTAGACAT+TGG | 0.609472 | 8.3:+41842102 | MS.gene72959:CDS |
CGGAAGATGCGTCTCTCTTG+CGG | 0.610368 | 8.3:+41841085 | MS.gene72959:CDS |
GAACTTAGTCATATTTAACT+CGG | 0.618369 | 8.3:-41843107 | None:intergenic |
GGGCTTCAAACTCCCTCTCG+CGG | 0.620327 | 8.3:+41841219 | MS.gene72959:CDS |
ACAACTAGACATTGGTAATG+TGG | 0.620834 | 8.3:+41842110 | MS.gene72959:CDS |
AAGGTAACCTGATGGAGAGG+AGG | 0.620939 | 8.3:-41841258 | None:intergenic |
AGGCTAAGGTACTTGAGACC+AGG | 0.622331 | 8.3:-41842297 | None:intergenic |
CTCTCCCGGCGTCGACGGCG+AGG | 0.630012 | 8.3:+41840994 | MS.gene72959:CDS |
CTCAAGGTACGGCCCAACGG+CGG | 0.630217 | 8.3:-41841161 | None:intergenic |
GACGCATCTTCCGAATGTCG+CGG | 0.638940 | 8.3:-41841075 | None:intergenic |
AAAGTGGATATAGGTCAAGT+GGG | 0.643217 | 8.3:-41842911 | None:intergenic |
ACGGCTTTCTCTCTTTACGA+AGG | 0.645259 | 8.3:+41841050 | MS.gene72959:CDS |
GTTTAGTTGTAATACAACAA+TGG | 0.648312 | 8.3:+41842470 | MS.gene72959:CDS |
TCTTATAATTCAGAATGACA+AGG | 0.648619 | 8.3:+41842738 | MS.gene72959:CDS |
TGTTGGGAACTTGCACAACG+TGG | 0.655593 | 8.3:+41842350 | MS.gene72959:CDS |
TGCATGATAGGACCGCGAGA+GGG | 0.662917 | 8.3:-41841231 | None:intergenic |
GTCCTAAGACCAAATTGATG+TGG | 0.669559 | 8.3:-41842856 | None:intergenic |
GTGCATGATAGGACCGCGAG+AGG | 0.674731 | 8.3:-41841232 | None:intergenic |
TGTCTTGAGATAGACACACC+TGG | 0.677521 | 8.3:+41842279 | MS.gene72959:CDS |
GAAGATACCTATGAGAGACA+AGG | 0.684686 | 8.3:-41840928 | None:intergenic |
GGTCGAGATGAAGATCCTCA+AGG | 0.701781 | 8.3:-41841177 | None:intergenic |
TGGGAACTTGCACAACGTGG+AGG | 0.706891 | 8.3:+41842353 | MS.gene72959:CDS |
CGCCAATAGTGATATCAGTG+AGG | 0.714173 | 8.3:-41842317 | None:intergenic |
CGGCAGACAGTAGATCCCCG+TGG | 0.745934 | 8.3:-41843087 | None:intergenic |
AAAATTTCGTATATGCCACG+GGG | 0.751789 | 8.3:+41843072 | MS.gene72959:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAAAGGAATATATAATCA+TGG | - | chr8.3:41842515-41842534 | None:intergenic | 15.0% |
!!! | ATGTTTTTTTTAGAAAGTTT+AGG | - | chr8.3:41841626-41841645 | None:intergenic | 15.0% |
!!! | TTGTCATATCTTTTATTAAT+TGG | - | chr8.3:41841765-41841784 | None:intergenic | 15.0% |
!! | ACTAAAATACTCAAATATGA+AGG | - | chr8.3:41841297-41841316 | None:intergenic | 20.0% |
!! | CTAAAATACTCAAATATGAA+GGG | - | chr8.3:41841296-41841315 | None:intergenic | 20.0% |
!! | GAAGACTACTAAATATATAA+AGG | - | chr8.3:41842530-41842549 | None:intergenic | 20.0% |
!! | TGAAGGGAAAAAAAAAAAAA+AGG | - | chr8.3:41841280-41841299 | None:intergenic | 20.0% |
!!! | ACGAAATTTTTTTGAGAAAA+TGG | - | chr8.3:41843062-41843081 | None:intergenic | 20.0% |
!!! | TTTTTATTCTACTATTGTAC+TGG | + | chr8.3:41841874-41841893 | MS.gene72959:intron | 20.0% |
! | AAAAAAAAAAGGTAACCTGA+TGG | - | chr8.3:41841269-41841288 | None:intergenic | 25.0% |
! | AAAAAATTTCGTATATGCCA+CGG | + | chr8.3:41843070-41843089 | MS.gene72959:CDS | 25.0% |
! | AGTAAATTCAAAACTCTTCA+AGG | - | chr8.3:41842238-41842257 | None:intergenic | 25.0% |
! | ATTATAAGAGCTTCAAGTAT+AGG | - | chr8.3:41842727-41842746 | None:intergenic | 25.0% |
! | GTTTAGTTGTAATACAACAA+TGG | + | chr8.3:41842470-41842489 | MS.gene72959:CDS | 25.0% |
! | TCTTATAATTCAGAATGACA+AGG | + | chr8.3:41842738-41842757 | MS.gene72959:CDS | 25.0% |
! | TGTTATATGAAAATAACTCG+AGG | + | chr8.3:41841658-41841677 | MS.gene72959:intron | 25.0% |
!!! | ATATCCTTTAAAGTGGATAT+AGG | - | chr8.3:41842923-41842942 | None:intergenic | 25.0% |
!!! | GTGTTGTTTGTTTGATTATT+TGG | + | chr8.3:41842800-41842819 | MS.gene72959:intron | 25.0% |
!!! | TTTTTCGAAAATGCACTTTT+CGG | + | chr8.3:41842624-41842643 | MS.gene72959:CDS | 25.0% |
AAAAATTTCGTATATGCCAC+GGG | + | chr8.3:41843071-41843090 | MS.gene72959:CDS | 30.0% | |
AAAATAACTCGAGGAAAACT+AGG | + | chr8.3:41841667-41841686 | MS.gene72959:intron | 30.0% | |
AAGAGATTACAACTAGACAT+TGG | + | chr8.3:41842102-41842121 | MS.gene72959:CDS | 30.0% | |
ACGTACCAAAAGAGATTATT+AGG | + | chr8.3:41842583-41842602 | MS.gene72959:intron | 30.0% | |
AGTTGTAATCTCTTCAATGA+TGG | - | chr8.3:41842096-41842115 | None:intergenic | 30.0% | |
TACAGAGAGTTAGGTATAAT+GGG | + | chr8.3:41841341-41841360 | MS.gene72959:intron | 30.0% | |
TTAAAGGATATAGAGGATGT+TGG | + | chr8.3:41842932-41842951 | MS.gene72959:CDS | 30.0% | |
TTAGAAAGTTTAGGTGAGTT+GGG | - | chr8.3:41841617-41841636 | None:intergenic | 30.0% | |
TTGACCTATATCCACTTTAA+AGG | + | chr8.3:41842916-41842935 | MS.gene72959:CDS | 30.0% | |
TTTAGAAAGTTTAGGTGAGT+TGG | - | chr8.3:41841618-41841637 | None:intergenic | 30.0% | |
! | AGACAATTAGGAACACTTTT+CGG | - | chr8.3:41842886-41842905 | None:intergenic | 30.0% |
! | ATCCACTTTAAAGGATATAG+AGG | + | chr8.3:41842925-41842944 | MS.gene72959:CDS | 30.0% |
! | ATCCTCTATATCCTTTAAAG+TGG | - | chr8.3:41842930-41842949 | None:intergenic | 30.0% |
! | GACTACCTAATAATCTCTTT+TGG | - | chr8.3:41842591-41842610 | None:intergenic | 30.0% |
! | GCTAGTTATGTTTTGCATTA+TGG | + | chr8.3:41842970-41842989 | MS.gene72959:CDS | 30.0% |
! | TTCCTTTTCAACTGAATCTT+TGG | + | chr8.3:41842191-41842210 | MS.gene72959:CDS | 30.0% |
! | TTGAAGAAAATGCGTTTTTC+TGG | + | chr8.3:41843000-41843019 | MS.gene72959:CDS | 30.0% |
! | TTTATTTGCTACAGAGAGTT+AGG | + | chr8.3:41841332-41841351 | MS.gene72959:intron | 30.0% |
!! | AGATATGACAAAACTTGCTA+AGG | + | chr8.3:41841774-41841793 | MS.gene72959:intron | 30.0% |
!! | AGCAAAGTCTTTGAAATGTT+CGG | - | chr8.3:41841020-41841039 | None:intergenic | 30.0% |
!! | AGTTTCAAAGTTTCTAAGAC+TGG | - | chr8.3:41842171-41842190 | None:intergenic | 30.0% |
!! | ATTGAGTTTAACTTGAGCTT+TGG | + | chr8.3:41842768-41842787 | MS.gene72959:intron | 30.0% |
!! | TGAAGTTATCAAGTTGAGAT+TGG | - | chr8.3:41841111-41841130 | None:intergenic | 30.0% |
AAAATTTCGTATATGCCACG+GGG | + | chr8.3:41843072-41843091 | MS.gene72959:CDS | 35.0% | |
AAAGTGGATATAGGTCAAGT+GGG | - | chr8.3:41842914-41842933 | None:intergenic | 35.0% | |
AGAGATTCCTGCATCAATAA+TGG | - | chr8.3:41841520-41841539 | None:intergenic | 35.0% | |
ATCACCAATTACTACTCCAT+CGG | - | chr8.3:41841695-41841714 | None:intergenic | 35.0% | |
CATCGTAGAAATCAAAAGCT+TGG | - | chr8.3:41840970-41840989 | None:intergenic | 35.0% | |
CTACAGAGAGTTAGGTATAA+TGG | + | chr8.3:41841340-41841359 | MS.gene72959:intron | 35.0% | |
GAGATTCCTGCATCAATAAT+GGG | - | chr8.3:41841519-41841538 | None:intergenic | 35.0% | |
GATCTGTAAGTACGTTTGTT+GGG | + | chr8.3:41841549-41841568 | MS.gene72959:intron | 35.0% | |
GGTGAGATCTTTGTAGAATT+GGG | + | chr8.3:41842048-41842067 | MS.gene72959:CDS | 35.0% | |
TAAAGTGGATATAGGTCAAG+TGG | - | chr8.3:41842915-41842934 | None:intergenic | 35.0% | |
TATTGATGCAGGAATCTCTT+TGG | + | chr8.3:41841521-41841540 | MS.gene72959:intron | 35.0% | |
TCAAAACTCTTCAAGGAAGA+TGG | - | chr8.3:41842231-41842250 | None:intergenic | 35.0% | |
TGATCTGTAAGTACGTTTGT+TGG | + | chr8.3:41841548-41841567 | MS.gene72959:intron | 35.0% | |
TGTAGAATTGGGACAATCAT+CGG | + | chr8.3:41842059-41842078 | MS.gene72959:CDS | 35.0% | |
TTAGACATTCACTTGCAGAA+TGG | + | chr8.3:41841850-41841869 | MS.gene72959:intron | 35.0% | |
!! | ACAACTAGACATTGGTAATG+TGG | + | chr8.3:41842110-41842129 | MS.gene72959:CDS | 35.0% |
!! | TTTAACTTGAGCTTTGGTGT+GGG | + | chr8.3:41842774-41842793 | MS.gene72959:intron | 35.0% |
!!! | GACTTTGCTATTTTCGTCAA+CGG | + | chr8.3:41841031-41841050 | MS.gene72959:CDS | 35.0% |
!!! | GCGTTTTTCTGGTTTTTTGT+TGG | + | chr8.3:41843011-41843030 | MS.gene72959:CDS | 35.0% |
AAAAAGGTAACCTGATGGAG+AGG | - | chr8.3:41841264-41841283 | None:intergenic | 40.0% | |
AACAGATTCACTTCCAGAAG+AGG | - | chr8.3:41842400-41842419 | None:intergenic | 40.0% | |
AAGTGGGATGCAAGACAATT+AGG | - | chr8.3:41842898-41842917 | None:intergenic | 40.0% | |
ACAATGAAAGTTGACTGCGT+TGG | + | chr8.3:41841457-41841476 | MS.gene72959:intron | 40.0% | |
AGATGAAGATCCTCAAGGTA+CGG | - | chr8.3:41841175-41841194 | None:intergenic | 40.0% | |
AGCCTCACTGATATCACTAT+TGG | + | chr8.3:41842315-41842334 | MS.gene72959:CDS | 40.0% | |
CGGTGAGATCTTTGTAGAAT+TGG | + | chr8.3:41842047-41842066 | MS.gene72959:CDS | 40.0% | |
CTCATAGGTATCTTCATCTC+TGG | + | chr8.3:41840936-41840955 | MS.gene72959:CDS | 40.0% | |
GAAGATACCTATGAGAGACA+AGG | - | chr8.3:41840931-41840950 | None:intergenic | 40.0% | |
GATACAGCACCACATCAATT+TGG | + | chr8.3:41842847-41842866 | MS.gene72959:CDS | 40.0% | |
GGCAGAGAGAAGGATATTAA+TGG | - | chr8.3:41842145-41842164 | None:intergenic | 40.0% | |
GGCCAAAGATTCAGTTGAAA+AGG | - | chr8.3:41842196-41842215 | None:intergenic | 40.0% | |
GGTACGTACAAAACAACAAG+TGG | - | chr8.3:41842570-41842589 | None:intergenic | 40.0% | |
GTCCTAAGACCAAATTGATG+TGG | - | chr8.3:41842859-41842878 | None:intergenic | 40.0% | |
TAGTGATATCAGTGAGGCTA+AGG | - | chr8.3:41842314-41842333 | None:intergenic | 40.0% | |
TCAACTCCCATTATTGATGC+AGG | + | chr8.3:41841510-41841529 | MS.gene72959:intron | 40.0% | |
TGAATCTTTGGCCAAGCTTA+GGG | + | chr8.3:41842203-41842222 | MS.gene72959:CDS | 40.0% | |
TGTAATGCACACAGTCTCTA+CGG | + | chr8.3:41842027-41842046 | MS.gene72959:intron | 40.0% | |
! | CACCACATCAATTTGGTCTT+AGG | + | chr8.3:41842854-41842873 | MS.gene72959:CDS | 40.0% |
!! | CAAAGTTTCTAAGACTGGAC+AGG | - | chr8.3:41842166-41842185 | None:intergenic | 40.0% |
!! | GTTTAACTTGAGCTTTGGTG+TGG | + | chr8.3:41842773-41842792 | MS.gene72959:intron | 40.0% |
!! | TACAGAAAAGCGTCGAAAGT+AGG | - | chr8.3:41842685-41842704 | None:intergenic | 40.0% |
ACGGCTTTCTCTCTTTACGA+AGG | + | chr8.3:41841050-41841069 | MS.gene72959:CDS | 45.0% | |
AGAGGAGGTTAGTGCATGAT+AGG | - | chr8.3:41841246-41841265 | None:intergenic | 45.0% | |
CGCCAATAGTGATATCAGTG+AGG | - | chr8.3:41842320-41842339 | None:intergenic | 45.0% | |
CTGAATCTTTGGCCAAGCTT+AGG | + | chr8.3:41842202-41842221 | MS.gene72959:CDS | 45.0% | |
CTTGATGTAGTCTCCTCTTC+TGG | + | chr8.3:41842384-41842403 | MS.gene72959:CDS | 45.0% | |
CTTGGAGGAGAGTGAGTAAA+GGG | - | chr8.3:41842425-41842444 | None:intergenic | 45.0% | |
GGATCCGATGGAGTAGTAAT+TGG | + | chr8.3:41841688-41841707 | MS.gene72959:intron | 45.0% | |
GTAGAGTTTACTCACCAGCA+AGG | + | chr8.3:41841479-41841498 | MS.gene72959:intron | 45.0% | |
TGTCTTGAGATAGACACACC+TGG | + | chr8.3:41842279-41842298 | MS.gene72959:CDS | 45.0% | |
TTCTACGATGAGTACTCTCC+CGG | + | chr8.3:41840980-41840999 | MS.gene72959:CDS | 45.0% | |
! | AGTTGTACCTTGTTTCCTGC+AGG | + | chr8.3:41842825-41842844 | MS.gene72959:intron | 45.0% |
!! | ATTTAACTCCAGAGAGCGCT+TGG | - | chr8.3:41842443-41842462 | None:intergenic | 45.0% |
!! | TAGAGGATGTTGGCTTGAGA+TGG | + | chr8.3:41842942-41842961 | MS.gene72959:CDS | 45.0% |
!!! | TTTTTTTTTTTTTTTTTGAA+AGG | - | chr8.3:41841437-41841456 | None:intergenic | 5.0% |
AAGGTAACCTGATGGAGAGG+AGG | - | chr8.3:41841261-41841280 | None:intergenic | 50.0% | |
AGTTGATCTCACCACCTTGC+TGG | - | chr8.3:41841496-41841515 | None:intergenic | 50.0% | |
CGAGGAAAACTAGGATCCGA+TGG | + | chr8.3:41841676-41841695 | MS.gene72959:intron | 50.0% | |
CTCTTCTCGTCTGAGGATCA+GGG | + | chr8.3:41841199-41841218 | MS.gene72959:CDS | 50.0% | |
GAGTTTACTCACCAGCAAGG+TGG | + | chr8.3:41841482-41841501 | MS.gene72959:intron | 50.0% | |
GCTGTATCCTGCAGGAAACA+AGG | - | chr8.3:41842835-41842854 | None:intergenic | 50.0% | |
GCTTGGAGGAGAGTGAGTAA+AGG | - | chr8.3:41842426-41842445 | None:intergenic | 50.0% | |
GGAAGATGGAACCCTAAGCT+TGG | - | chr8.3:41842217-41842236 | None:intergenic | 50.0% | |
GGTCGAGATGAAGATCCTCA+AGG | - | chr8.3:41841180-41841199 | None:intergenic | 50.0% | |
GTGCAAGTTCCCAACAGAAG+TGG | - | chr8.3:41842346-41842365 | None:intergenic | 50.0% | |
TGTTGGGAACTTGCACAACG+TGG | + | chr8.3:41842350-41842369 | MS.gene72959:CDS | 50.0% | |
! | AGGCTAAGGTACTTGAGACC+AGG | - | chr8.3:41842300-41842319 | None:intergenic | 50.0% |
! | ATTGGCGATGCCACTTCTGT+TGG | + | chr8.3:41842333-41842352 | MS.gene72959:CDS | 50.0% |
! | TTGGCGATGCCACTTCTGTT+GGG | + | chr8.3:41842334-41842353 | MS.gene72959:CDS | 50.0% |
ACGCATCTTCCGAATGTCGC+GGG | - | chr8.3:41841077-41841096 | None:intergenic | 55.0% | |
AGACTGGACAGGCAGAGAGA+AGG | - | chr8.3:41842155-41842174 | None:intergenic | 55.0% | |
ATCCTCAAGGTACGGCCCAA+CGG | - | chr8.3:41841167-41841186 | None:intergenic | 55.0% | |
CCTCTTCTCGTCTGAGGATC+AGG | + | chr8.3:41841198-41841217 | MS.gene72959:CDS | 55.0% | |
CCTGATCCTCAGACGAGAAG+AGG | - | chr8.3:41841201-41841220 | None:intergenic | 55.0% | |
CGGAAGATGCGTCTCTCTTG+CGG | + | chr8.3:41841085-41841104 | MS.gene72959:CDS | 55.0% | |
CTGAACGCTCTGTTGACACG+TGG | + | chr8.3:41841131-41841150 | MS.gene72959:CDS | 55.0% | |
GACGCATCTTCCGAATGTCG+CGG | - | chr8.3:41841078-41841097 | None:intergenic | 55.0% | |
GCACTAACCTCCTCTCCATC+AGG | + | chr8.3:41841251-41841270 | MS.gene72959:CDS | 55.0% | |
TACGAAGGACCCGCGACATT+CGG | + | chr8.3:41841065-41841084 | MS.gene72959:CDS | 55.0% | |
TCTCGACCTCTTCTCGTCTG+AGG | + | chr8.3:41841192-41841211 | MS.gene72959:CDS | 55.0% | |
TGCATGATAGGACCGCGAGA+GGG | - | chr8.3:41841234-41841253 | None:intergenic | 55.0% | |
TGGGAACTTGCACAACGTGG+AGG | + | chr8.3:41842353-41842372 | MS.gene72959:CDS | 55.0% | |
!! | GATGTGGTGCTGTATCCTGC+AGG | - | chr8.3:41842843-41842862 | None:intergenic | 55.0% |
!! | TAACTCCAGAGAGCGCTTGG+AGG | - | chr8.3:41842440-41842459 | None:intergenic | 55.0% |
ACTCTCCTCCAAGCGCTCTC+TGG | + | chr8.3:41842432-41842451 | MS.gene72959:CDS | 60.0% | |
AGAGACCTGCCTTGTCGCTC+GGG | + | chr8.3:41841580-41841599 | MS.gene72959:intron | 60.0% | |
GAGAGACCTGCCTTGTCGCT+CGG | + | chr8.3:41841579-41841598 | MS.gene72959:intron | 60.0% | |
GGGCTTCAAACTCCCTCTCG+CGG | + | chr8.3:41841219-41841238 | MS.gene72959:CDS | 60.0% | |
GTGCATGATAGGACCGCGAG+AGG | - | chr8.3:41841235-41841254 | None:intergenic | 60.0% | |
AAGCTCCCGAGCGACAAGGC+AGG | - | chr8.3:41841588-41841607 | None:intergenic | 65.0% | |
ACGTGGATTCGCACCGCCGT+TGG | + | chr8.3:41841148-41841167 | MS.gene72959:CDS | 65.0% | |
CCAGAAGCTCCCGAGCGACA+AGG | - | chr8.3:41841592-41841611 | None:intergenic | 65.0% | |
CCTTGTCGCTCGGGAGCTTC+TGG | + | chr8.3:41841589-41841608 | MS.gene72959:intron | 65.0% | |
CGGCAGACAGTAGATCCCCG+TGG | - | chr8.3:41843090-41843109 | None:intergenic | 65.0% | |
CGTGGATTCGCACCGCCGTT+GGG | + | chr8.3:41841149-41841168 | MS.gene72959:CDS | 65.0% | |
CTCAAGGTACGGCCCAACGG+CGG | - | chr8.3:41841164-41841183 | None:intergenic | 65.0% | |
! | GAGTACTCTCCCGGCGTCGA+CGG | + | chr8.3:41840989-41841008 | MS.gene72959:CDS | 65.0% |
CGCCGTTGGGCCGTACCTTG+AGG | + | chr8.3:41841162-41841181 | MS.gene72959:CDS | 70.0% | |
TTCGGCCTCGCCGTCGACGC+CGG | - | chr8.3:41841002-41841021 | None:intergenic | 75.0% | |
! | TCGGCCTCGCCGTCGACGCC+GGG | - | chr8.3:41841001-41841020 | None:intergenic | 80.0% |
!!! | CTCTCCCGGCGTCGACGGCG+AGG | + | chr8.3:41840994-41841013 | MS.gene72959:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 41840923 | 41843125 | 41840923 | ID=MS.gene72959 |
chr8.3 | mRNA | 41840923 | 41843125 | 41840923 | ID=MS.gene72959.t1;Parent=MS.gene72959 |
chr8.3 | exon | 41840923 | 41841272 | 41840923 | ID=MS.gene72959.t1.exon1;Parent=MS.gene72959.t1 |
chr8.3 | CDS | 41840923 | 41841272 | 41840923 | ID=cds.MS.gene72959.t1;Parent=MS.gene72959.t1 |
chr8.3 | exon | 41842041 | 41842491 | 41842041 | ID=MS.gene72959.t1.exon2;Parent=MS.gene72959.t1 |
chr8.3 | CDS | 41842041 | 41842491 | 41842041 | ID=cds.MS.gene72959.t1;Parent=MS.gene72959.t1 |
chr8.3 | exon | 41842595 | 41842759 | 41842595 | ID=MS.gene72959.t1.exon3;Parent=MS.gene72959.t1 |
chr8.3 | CDS | 41842595 | 41842759 | 41842595 | ID=cds.MS.gene72959.t1;Parent=MS.gene72959.t1 |
chr8.3 | exon | 41842847 | 41843125 | 41842847 | ID=MS.gene72959.t1.exon4;Parent=MS.gene72959.t1 |
chr8.3 | CDS | 41842847 | 41843125 | 41842847 | ID=cds.MS.gene72959.t1;Parent=MS.gene72959.t1 |
Gene Sequence |
Protein sequence |