AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25412

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25412.t1 MTR_8g468810 82.192 365 44 4 1 360 51 399 0.0 587
MS.gene25412.t1 MTR_8g468810 84.320 338 36 3 1 337 51 372 0.0 559
MS.gene25412.t1 MTR_8g468810 83.986 281 29 2 1 281 51 315 9.41e-164 462
MS.gene25412.t1 MTR_8g468810 83.986 281 29 2 1 281 51 315 1.54e-163 462
MS.gene25412.t1 MTR_8g468810 83.986 281 29 2 1 281 51 315 2.16e-163 462
MS.gene25412.t1 MTR_8g058970 62.133 375 109 4 1 356 45 405 2.14e-147 426
MS.gene25412.t1 MTR_2g083840 50.789 380 149 9 1 363 47 405 1.89e-107 324
MS.gene25412.t1 MTR_8g062270 47.244 381 156 12 1 360 41 397 1.56e-94 291
MS.gene25412.t1 MTR_8g468840 48.760 363 159 7 2 356 40 383 7.47e-94 289
MS.gene25412.t1 MTR_4g032730 49.315 365 148 10 3 356 43 381 1.60e-93 288
MS.gene25412.t1 MTR_5g092960 48.352 364 163 10 3 356 47 395 9.09e-88 273
MS.gene25412.t1 MTR_8g468760 48.378 370 123 12 1 356 34 349 2.64e-86 268
MS.gene25412.t1 MTR_8g467800 48.238 369 149 11 2 356 46 386 6.06e-86 269
MS.gene25412.t1 MTR_5g092960 49.560 341 151 9 3 337 47 372 9.71e-85 264
MS.gene25412.t1 MTR_8g014260 42.308 364 175 12 4 357 44 382 1.07e-74 239
MS.gene25412.t1 MTR_8g467800 55.000 260 105 5 2 256 46 298 1.63e-73 233
MS.gene25412.t1 MTR_8g445780 41.341 358 174 10 4 356 41 367 8.81e-73 233
MS.gene25412.t1 MTR_4g050250 38.974 390 184 12 1 360 47 412 8.43e-61 202
MS.gene25412.t1 MTR_8g058965 39.687 383 179 15 2 360 40 394 1.00e-57 195
MS.gene25412.t1 MTR_8g469020 35.864 382 196 11 2 360 34 389 2.44e-57 194
MS.gene25412.t1 MTR_8g014160 37.143 315 168 9 2 301 67 366 1.14e-50 176
MS.gene25412.t1 MTR_8g070950 36.901 355 154 13 1 336 41 344 1.22e-48 171
MS.gene25412.t1 MTR_8g062010 35.484 372 190 15 1 360 35 368 1.84e-41 151
MS.gene25412.t1 MTR_8g062080 35.180 361 195 14 1 356 49 375 2.57e-41 151
MS.gene25412.t1 MTR_8g062310 34.366 355 181 12 4 356 54 358 2.92e-40 148
MS.gene25412.t1 MTR_8g077460 43.005 193 104 4 4 191 38 229 1.36e-37 140
MS.gene25412.t1 MTR_8g062300 33.505 388 206 13 1 360 52 415 1.02e-36 139
MS.gene25412.t1 MTR_4g024710 40.984 244 117 8 117 356 58 278 3.51e-35 132
MS.gene25412.t1 MTR_8g467790 35.570 298 157 13 1 277 174 457 4.82e-35 135
MS.gene25412.t1 MTR_5g021550 51.724 116 53 3 4 116 47 162 1.65e-29 112
MS.gene25412.t1 MTR_4g024745 37.652 247 127 7 115 357 10 233 2.80e-29 115
MS.gene25412.t1 MTR_8g014290 45.528 123 58 5 4 117 38 160 2.26e-25 101
MS.gene25412.t1 MTR_2g086020 42.857 154 69 6 1 147 1 142 1.49e-22 97.4
MS.gene25412.t1 MTR_8g014210 38.919 185 90 7 174 357 1 163 1.91e-21 92.4
MS.gene25412.t1 MTR_4g113810 33.143 175 100 6 57 221 1 168 2.99e-20 87.4
MS.gene25412.t1 MTR_4g024720 39.552 134 58 6 4 116 45 176 4.60e-20 88.2
MS.gene25412.t1 MTR_8g014220 43.089 123 58 5 44 161 45 160 2.38e-18 82.0
MS.gene25412.t1 MTR_1g041245 35.465 172 88 6 2 166 37 192 2.35e-15 77.4
MS.gene25412.t1 MTR_4g056070 29.080 337 187 14 41 356 109 414 2.72e-15 77.4
MS.gene25412.t1 MTR_4g056040 29.032 341 184 14 41 357 99 405 7.09e-15 76.6
MS.gene25412.t1 MTR_4g056030 27.811 338 192 13 41 357 69 375 2.13e-12 68.9
MS.gene25412.t1 MTR_7g032380 33.728 169 95 6 2 166 37 192 6.04e-12 67.0
MS.gene25412.t1 MTR_7g032370 34.524 168 94 7 2 166 16 170 1.84e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25412.t1 AT1G80470 25.723 346 213 15 2 335 41 354 1.81e-16 81.3
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 5.81e-14 73.2
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 5.81e-14 73.2
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 6.80e-14 72.4
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 47 289 8.04e-14 73.2
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 1.12e-13 72.4
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 1.12e-13 72.4
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 1.12e-13 72.4
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 1.12e-13 72.4
MS.gene25412.t1 AT4G26340 26.216 370 215 15 2 358 28 352 1.58e-13 72.0
MS.gene25412.t1 AT4G14103 27.386 241 157 9 2 234 34 264 3.35e-13 70.9
MS.gene25412.t1 AT4G14103 27.386 241 157 9 2 234 34 264 3.35e-13 70.9
MS.gene25412.t1 AT1G06630 28.346 254 160 8 2 244 38 280 4.13e-13 71.2
MS.gene25412.t1 AT4G14103 27.386 241 157 9 2 234 34 264 4.75e-13 70.9
MS.gene25412.t1 AT5G22670 26.708 322 195 15 30 335 58 354 3.20e-11 65.1
MS.gene25412.t1 AT4G13985 22.946 353 226 12 1 334 44 369 3.44e-11 65.1

Find 105 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACGAGTTTCATCATTTA+TGG 0.138506 8.2:+40422821 MS.gene25412:CDS
TTTGGCAATGCAACTTCTAT+TGG 0.243149 8.2:+40421154 MS.gene25412:CDS
CCTATTTCTGCTAACCAATA+GGG 0.277517 8.2:+40422848 MS.gene25412:CDS
AGTTCCAAAGTTTCTAAGAT+TGG 0.318329 8.2:-40420989 None:intergenic
TTCTGACACTATAACATATA+AGG 0.334332 8.2:-40422802 None:intergenic
TGCAGGTTATATCACCATTT+CGG 0.340552 8.2:+40421708 MS.gene25412:intron
GAGGACGGCATTGACGAATA+TGG 0.341114 8.2:-40419084 None:intergenic
TCGGCCTCGCCGTCGACATC+GGG 0.348507 8.2:-40419044 None:intergenic
TGGTGAGATCTTTACGGAAT+TGG 0.359966 8.2:+40420868 MS.gene25412:CDS
TTGGCAATGCAACTTCTATT+GGG 0.363130 8.2:+40421155 MS.gene25412:CDS
TGCATTGCCAAATGTGATAT+TGG 0.374879 8.2:-40421143 None:intergenic
AAGTGGGATACAAGACAATT+AGG 0.375798 8.2:-40421761 None:intergenic
TCTCTATGGTGAGATCTTTA+CGG 0.376816 8.2:+40420862 MS.gene25412:CDS
TCCTATTTCTGCTAACCAAT+AGG 0.384602 8.2:+40422847 MS.gene25412:CDS
CCGAATCTTTGGCCAAGCTT+AGG 0.388638 8.2:+40421023 MS.gene25412:CDS
GGCAGAGAGAAGGATATTAA+TGG 0.390004 8.2:-40420963 None:intergenic
CGAATCTTTGGCCAAGCTTA+GGG 0.393635 8.2:+40421024 MS.gene25412:CDS
CCCTATTGGTTAGCAGAAAT+AGG 0.394802 8.2:-40422848 None:intergenic
AGCCTCACCAATATCACATT+TGG 0.403388 8.2:+40421136 MS.gene25412:CDS
TACCTGATGGAGAGGAGGTT+AGG 0.408512 8.2:-40419299 None:intergenic
TTCGGCCTCGCCGTCGACAT+CGG 0.410886 8.2:-40419045 None:intergenic
GGCAAAGTCTTTGAAATGTT+CGG 0.419126 8.2:-40419063 None:intergenic
CGAAGTTATCAAGTTGAGAT+TGG 0.421124 8.2:-40419154 None:intergenic
CTCACAGGTATCTTCATCTC+TGG 0.428747 8.2:+40418982 MS.gene25412:CDS
AGAGGAGGTTAGGGCATGAT+AGG 0.429110 8.2:-40419289 None:intergenic
ACTCTCCTCCAAGCTCTCTC+TGG 0.432658 8.2:+40421253 MS.gene25412:CDS
ACTCTCCTCCAAGCTCTCTC+TGG 0.432658 8.2:+40421295 MS.gene25412:CDS
TGTAATGTACACAGTCTCTA+TGG 0.437747 8.2:+40420848 MS.gene25412:intron
GTTTAATGCCAGAGAGAGCT+TGG 0.438724 8.2:-40421303 None:intergenic
CCTAAGCTTGGCCAAAGATT+CGG 0.439078 8.2:-40421023 None:intergenic
GGCCAAAGATTCGGTTGAAA+AGG 0.442677 8.2:-40421014 None:intergenic
TACGAAGGACCCGCGACATT+CGG 0.443329 8.2:+40419111 MS.gene25412:CDS
TGAAGAACGTCGTACAGAAA+AGG 0.449207 8.2:-40421561 None:intergenic
CTGTCCAATCTTAGAAACTT+TGG 0.459587 8.2:+40420985 MS.gene25412:CDS
CTTGGAGGAGAGTGAGTAAA+GGG 0.461485 8.2:-40421243 None:intergenic
CTTGGAGGAGAGTGAGTAAA+GGG 0.461485 8.2:-40421285 None:intergenic
GCCCTAACCTCCTCTCCATC+AGG 0.465327 8.2:+40419297 MS.gene25412:CDS
ACCTGATGGAGAGGAGGTTA+GGG 0.466754 8.2:-40419298 None:intergenic
CTCGCTCTCTTCTCGTCTGA+GGG 0.467717 8.2:+40419239 MS.gene25412:CDS
CAACAATGCCAGAGAGAGCT+TGG 0.468513 8.2:-40421261 None:intergenic
ATTATGAGAGCTTGAAGTAT+AGG 0.476673 8.2:-40421591 None:intergenic
TACGGAATTGGAACAATCCT+CGG 0.476698 8.2:+40420880 MS.gene25412:CDS
ACGTGGATCCGCACCGCAGT+TGG 0.478191 8.2:+40419194 MS.gene25412:CDS
CGTGGATCCGCACCGCAGTT+GGG 0.478888 8.2:+40419195 MS.gene25412:CDS
CATCGTAGAAATCAAAAGCT+TGG 0.496050 8.2:-40419013 None:intergenic
GGATGGCGAGGAGCAGAGTA+AGG 0.498121 8.2:-40422781 None:intergenic
TCTCGCTCTCTTCTCGTCTG+AGG 0.498144 8.2:+40419238 MS.gene25412:CDS
GAAGAACGTCGTACAGAAAA+GGG 0.498849 8.2:-40421560 None:intergenic
CAAAGTTTCTAAGATTGGAC+AGG 0.500334 8.2:-40420984 None:intergenic
TCTTAGAAATTGTATCCGTC+TGG 0.500654 8.2:-40422754 None:intergenic
ATGTGATATTGGTGAGGCTA+AGG 0.505330 8.2:-40421132 None:intergenic
GCCGTGAGACTATACCGAAA+TGG 0.518013 8.2:-40421722 None:intergenic
CTCAAGGTGGGGCCCAACTG+CGG 0.518069 8.2:-40419207 None:intergenic
CAATGAGTCTTGTTTCTCAC+AGG 0.521437 8.2:+40418967 None:intergenic
TACAGAAAAGGGTCGAAAGT+AGG 0.524208 8.2:-40421549 None:intergenic
ACAGAAAAGGGTCGAAAGTA+GGG 0.524425 8.2:-40421548 None:intergenic
CTATTTCTGCTAACCAATAG+GGG 0.531475 8.2:+40422849 MS.gene25412:CDS
GCTTGGAGGAGAGTGAGTAA+AGG 0.536107 8.2:-40421244 None:intergenic
GCTTGGAGGAGAGTGAGTAA+AGG 0.536107 8.2:-40421286 None:intergenic
CGCAGTTGGGCCCCACCTTG+AGG 0.537223 8.2:+40419208 MS.gene25412:CDS
ATTAAACGTCTAGTGTTTCG+TGG 0.537844 8.2:+40421319 MS.gene25412:CDS
AGATGTAATCTCTTCAATGA+TGG 0.541081 8.2:-40420914 None:intergenic
ACGTAACAAAAGAGATTACT+TGG 0.550402 8.2:+40421450 MS.gene25412:intron
ACGCATCTTCCGAATGTCGC+GGG 0.555891 8.2:-40419120 None:intergenic
AACAGATTCACTTTCAGAAG+CGG 0.572108 8.2:-40421218 None:intergenic
CTCTTCTCGTCTGAGGGTGA+CGG 0.572937 8.2:+40419245 MS.gene25412:CDS
CAATGCCAGAGAGAGCTTGG+AGG 0.573365 8.2:-40421258 None:intergenic
GAATACTACCCCGATGTCGA+CGG 0.574728 8.2:+40419035 MS.gene25412:CDS
AGATTGGACAGGCAGAGAGA+AGG 0.579911 8.2:-40420973 None:intergenic
GGAAGATGGAACCCTAAGCT+TGG 0.579963 8.2:-40421035 None:intergenic
TAATGCCAGAGAGAGCTTGG+AGG 0.588199 8.2:-40421300 None:intergenic
GTAGACTTTCCTTCACCAGA+CGG 0.594200 8.2:+40422739 MS.gene25412:intron
AAATTGTATCCGTCTGGTGA+AGG 0.594658 8.2:-40422748 None:intergenic
GTTTCGTGGTTATACAGCAA+AGG 0.594947 8.2:+40421333 MS.gene25412:CDS
ACATCTAGACACTGGTAATG+TGG 0.599292 8.2:+40420931 MS.gene25412:CDS
ACCATTTCGGTATAGTCTCA+CGG 0.601373 8.2:+40421721 MS.gene25412:CDS
CTGAACGCTCTGTTGACACG+TGG 0.601980 8.2:+40419177 MS.gene25412:CDS
GAGATGAAGATCCTCAAGGT+GGG 0.607880 8.2:-40419219 None:intergenic
CGGAAGATGCGTCTCTCTTG+CGG 0.610368 8.2:+40419131 MS.gene25412:CDS
GACACTATAACATATAAGGA+TGG 0.619861 8.2:-40422798 None:intergenic
AGGCTAAGGTACTTGAGACC+AGG 0.622331 8.2:-40421118 None:intergenic
CGCGGGTCCTTCGTAGAGAG+AGG 0.630192 8.2:-40419103 None:intergenic
AGATGAAGATCCTCAAGGTG+GGG 0.631714 8.2:-40419218 None:intergenic
AAAGCGGTTACCTGATGGAG+AGG 0.634992 8.2:-40419307 None:intergenic
GACGCATCTTCCGAATGTCG+CGG 0.638940 8.2:-40419121 None:intergenic
GGGCATGATAGGACCGCGAG+AGG 0.644689 8.2:-40419278 None:intergenic
CGAGATGAAGATCCTCAAGG+TGG 0.647298 8.2:-40419220 None:intergenic
GGTCCTTCGTAGAGAGAGGA+CGG 0.648635 8.2:-40419099 None:intergenic
GAGCGAGATGAAGATCCTCA+AGG 0.648810 8.2:-40419223 None:intergenic
CGGCTTCAAACTCCCTCTCG+CGG 0.649691 8.2:+40419265 MS.gene25412:CDS
GCGGTTACCTGATGGAGAGG+AGG 0.652145 8.2:-40419304 None:intergenic
TGTCTTGAGATAAACACACC+TGG 0.659546 8.2:+40421100 MS.gene25412:CDS
ATGCCGTCCTCTCTCTACGA+AGG 0.660874 8.2:+40419096 MS.gene25412:CDS
GGTGGGGCCCAACTGCGGTG+CGG 0.661682 8.2:-40419202 None:intergenic
GGCATGATAGGACCGCGAGA+GGG 0.662917 8.2:-40419277 None:intergenic
AAGAGATTACATCTAGACAC+TGG 0.663342 8.2:+40420923 MS.gene25412:CDS
TATAACATATAAGGATGGCG+AGG 0.666801 8.2:-40422793 None:intergenic
TATTGGGAACTTGCACAACG+TGG 0.670170 8.2:+40421171 MS.gene25412:CDS
TGATGGTAAACAAACAGCCG+AGG 0.678095 8.2:-40420897 None:intergenic
TGGGAACTTGCACAACGTGG+AGG 0.687506 8.2:+40421174 MS.gene25412:CDS
TGCCAAATGTGATATTGGTG+AGG 0.688345 8.2:-40421138 None:intergenic
CGGCCTCGCCGTCGACATCG+GGG 0.702901 8.2:-40419043 None:intergenic
TCTCATAATTCAGTATGACA+AGG 0.711322 8.2:+40421605 MS.gene25412:CDS
CTACCCCGATGTCGACGGCG+AGG 0.714394 8.2:+40419040 MS.gene25412:CDS
GCTCTAGATGTAGTAAACAG+CGG 0.731159 8.2:-40421518 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAGAAAATAAAAAATA+TGG - chr8.2:40422569-40422588 None:intergenic 10.0%
!! AATTCATATCTTTAATTAAT+TGG - chr8.2:40419988-40420007 None:intergenic 10.0%
!! TATTGAATATAATTGATTAA+AGG + chr8.2:40420370-40420389 MS.gene25412:intron 10.0%
!!! AAATTTTTTACAAAAGTTAA+TGG - chr8.2:40419393-40419412 None:intergenic 10.0%
!! AATATAATTAGTAAACAAGA+AGG + chr8.2:40420722-40420741 MS.gene25412:intron 15.0%
!! ATTGAAAATGATAAGTAAAT+AGG - chr8.2:40419418-40419437 None:intergenic 15.0%
!! GTAAAAATAGTAGTAATAAT+AGG + chr8.2:40422416-40422435 MS.gene25412:intron 15.0%
!! TTATAAAGTTTAAATGAGTT+GGG - chr8.2:40419843-40419862 None:intergenic 15.0%
!! TTTATAAAGTTTAAATGAGT+TGG - chr8.2:40419844-40419863 None:intergenic 15.0%
!!! AAACAAATTTTTGTTTTAAC+CGG - chr8.2:40420114-40420133 None:intergenic 15.0%
!!! AGTAAATTTAAAACTTTTCA+AGG - chr8.2:40421059-40421078 None:intergenic 15.0%
!!! ATGAGTTAATTTGTAAAATT+AGG - chr8.2:40420548-40420567 None:intergenic 15.0%
!!! ATTCATTTCTATCATTTTAA+CGG - chr8.2:40422663-40422682 None:intergenic 15.0%
!!! TAAAACAAAAATTTGTTTCA+TGG + chr8.2:40420116-40420135 MS.gene25412:intron 15.0%
!!! TATGTTTTTGTTTGATTATT+TGG + chr8.2:40421666-40421685 MS.gene25412:intron 15.0%
!!! TCTACAAATGTATTTTATAT+AGG + chr8.2:40422588-40422607 MS.gene25412:intron 15.0%
!!! TTAAGAATTTTTTAACTTCT+GGG + chr8.2:40422538-40422557 MS.gene25412:intron 15.0%
!!! TTGAAAATTTTCTGATTATT+TGG - chr8.2:40421928-40421947 None:intergenic 15.0%
!! AATGGAATATATAATACACA+AGG - chr8.2:40421378-40421397 None:intergenic 20.0%
!! ACCAAGAAAAAAAAAAAAAC+TGG - chr8.2:40422442-40422461 None:intergenic 20.0%
!! AGAAAAATTAGATACATTGA+AGG - chr8.2:40422138-40422157 None:intergenic 20.0%
!! ATAATTGATTAAAGGATGAT+TGG + chr8.2:40420378-40420397 MS.gene25412:intron 20.0%
!! ATAGAAAAGTTATTATTCGT+TGG - chr8.2:40420295-40420314 None:intergenic 20.0%
!! ATATGAATAAGAAGAAAAAG+CGG - chr8.2:40419326-40419345 None:intergenic 20.0%
!! CACAAAACTATTACATATAA+TGG - chr8.2:40421396-40421415 None:intergenic 20.0%
!! GAAAAATTAGATACATTGAA+GGG - chr8.2:40422137-40422156 None:intergenic 20.0%
!! TGTTATATGAAAATAACTCA+AGG + chr8.2:40419884-40419903 MS.gene25412:intron 20.0%
!!! AAAATTTTCAAATATGCCAA+GGG + chr8.2:40421937-40421956 MS.gene25412:intron 20.0%
!!! AATACTCTTGTTTATTTGTT+AGG + chr8.2:40419455-40419474 MS.gene25412:intron 20.0%
!!! AGATTTTAGACTTATATTCA+AGG - chr8.2:40420196-40420215 None:intergenic 20.0%
!!! ATACTCTTGTTTATTTGTTA+GGG + chr8.2:40419456-40419475 MS.gene25412:intron 20.0%
!!! ATATCCTTTAAAGTGAATAT+AGG - chr8.2:40421789-40421808 None:intergenic 20.0%
!!! ATTTTCGAAAAATCTATAGA+AGG - chr8.2:40421483-40421502 None:intergenic 20.0%
!!! CTTTTAGTCCTTATAATTTA+GGG + chr8.2:40420023-40420042 MS.gene25412:intron 20.0%
!!! GCATATTTCTGTTTTTTTAT+CGG + chr8.2:40421877-40421896 MS.gene25412:intron 20.0%
!!! GTTAAGAATTTTTTAACTTC+TGG + chr8.2:40422537-40422556 MS.gene25412:intron 20.0%
!!! TCTTTTAGTCCTTATAATTT+AGG + chr8.2:40420022-40420041 MS.gene25412:intron 20.0%
!!! TTCATTTCTATCATTTTAAC+GGG - chr8.2:40422662-40422681 None:intergenic 20.0%
!!! TTTATTTGTTAGGTAGAAAT+AGG + chr8.2:40419588-40419607 MS.gene25412:intron 20.0%
!!! TTTTTACAAAAGTTAATGGA+GGG - chr8.2:40419389-40419408 None:intergenic 20.0%
!!! TTTTTTACAAAAGTTAATGG+AGG - chr8.2:40419390-40419409 None:intergenic 20.0%
! AAAATAACTCAAGGAAATCT+AGG + chr8.2:40419893-40419912 MS.gene25412:intron 25.0%
! AAATAGGTATGAAGTATGTT+GGG + chr8.2:40419481-40419500 MS.gene25412:intron 25.0%
! AAGTCTACAATAAATAACTC+AGG - chr8.2:40422727-40422746 None:intergenic 25.0%
! ATTAACTAAAAAGTGAGTAG+AGG + chr8.2:40420693-40420712 MS.gene25412:intron 25.0%
! CATTTAACTCAATTTAACCA+TGG + chr8.2:40422464-40422483 MS.gene25412:intron 25.0%
! CCAAGTTAATTCACAATAAA+TGG - chr8.2:40422341-40422360 None:intergenic 25.0%
! CCATTTATTGTGAATTAACT+TGG + chr8.2:40422338-40422357 MS.gene25412:intron 25.0%
! TACATGCTTACTAAATTTGA+AGG + chr8.2:40422289-40422308 MS.gene25412:intron 25.0%
! TAGGAAGTTATATTATGATG+TGG + chr8.2:40422607-40422626 MS.gene25412:intron 25.0%
! TCTCATAGTTAAACCTAATT+TGG + chr8.2:40422173-40422192 MS.gene25412:intron 25.0%
! TGACATGAATGTAAGAAAAA+GGG - chr8.2:40422070-40422089 None:intergenic 25.0%
! TGATGTATATGAACATATGT+TGG + chr8.2:40419774-40419793 MS.gene25412:intron 25.0%
! TTCTGACACTATAACATATA+AGG - chr8.2:40422805-40422824 None:intergenic 25.0%
! TTGACCTATATTCACTTTAA+AGG + chr8.2:40421782-40421801 MS.gene25412:intron 25.0%
! TTTAACAATGAAAGTTGACT+CGG + chr8.2:40419677-40419696 MS.gene25412:intron 25.0%
!! AAATTTTCAAATATGCCAAG+GGG + chr8.2:40421938-40421957 MS.gene25412:intron 25.0%
!! AAATTTTCAGATCTAGAAGA+AGG - chr8.2:40420243-40420262 None:intergenic 25.0%
!! ATTCACTTTAAAGGATATAG+AGG + chr8.2:40421791-40421810 MS.gene25412:intron 25.0%
!! ATTTTCGACCATGTTAATTT+TGG + chr8.2:40422094-40422113 MS.gene25412:intron 25.0%
!! GAAAATTTTCAAATATGCCA+AGG + chr8.2:40421936-40421955 MS.gene25412:intron 25.0%
!! TAACTTTTCTATGTAGAATG+AGG + chr8.2:40420303-40420322 MS.gene25412:intron 25.0%
!! TTTATTTGTTAGGGAGAAAT+AGG + chr8.2:40419465-40419484 MS.gene25412:intron 25.0%
!! TTTTACAAAAGTTAATGGAG+GGG - chr8.2:40419388-40419407 None:intergenic 25.0%
!! TTTTGTGTGTTTTATCTTGA+TGG + chr8.2:40420500-40420519 MS.gene25412:intron 25.0%
!!! AAAGAAGATTTTTTTTGCTG+TGG - chr8.2:40420144-40420163 None:intergenic 25.0%
!!! AAGAAGATTTTTTTTGCTGT+GGG - chr8.2:40420143-40420162 None:intergenic 25.0%
!!! GCCAGTTTTTTTTTTTTTCT+TGG + chr8.2:40422438-40422457 MS.gene25412:intron 25.0%
!!! TATCTTCGTAACACTTTTTT+TGG - chr8.2:40420456-40420475 None:intergenic 25.0%
!!! TTAAAACTTTTCAAGGAAGA+TGG - chr8.2:40421052-40421071 None:intergenic 25.0%
!!! TTTTTCGAAAATGCACTTTT+CGG + chr8.2:40421491-40421510 MS.gene25412:CDS 25.0%
AAAACACACAAAAAAACTCC+AGG - chr8.2:40420493-40420512 None:intergenic 30.0%
AAAGCACAGTAGAATAAAGA+TGG - chr8.2:40422008-40422027 None:intergenic 30.0%
AAAGTGAATATAGGTCAAGT+GGG - chr8.2:40421780-40421799 None:intergenic 30.0%
AATAACTCGTAAAAAGTGAC+CGG + chr8.2:40420591-40420610 MS.gene25412:intron 30.0%
AATTAACATGGTCGAAAATG+TGG - chr8.2:40422093-40422112 None:intergenic 30.0%
ACAATAAATGGCATGAAATC+GGG - chr8.2:40422329-40422348 None:intergenic 30.0%
ACGTAACAAAAGAGATTACT+TGG + chr8.2:40421450-40421469 MS.gene25412:intron 30.0%
AGAACGAGTTTCATCATTTA+TGG + chr8.2:40422821-40422840 MS.gene25412:CDS 30.0%
AGATGTAATCTCTTCAATGA+TGG - chr8.2:40420917-40420936 None:intergenic 30.0%
AGGGTAGAACTAGATTAATT+AGG - chr8.2:40422219-40422238 None:intergenic 30.0%
ATTATGAGAGCTTGAAGTAT+AGG - chr8.2:40421594-40421613 None:intergenic 30.0%
CAATTCCACCAAAATTAACA+TGG - chr8.2:40422105-40422124 None:intergenic 30.0%
CACAATAAATGGCATGAAAT+CGG - chr8.2:40422330-40422349 None:intergenic 30.0%
CGGGTTTCTATAGTAATATT+TGG - chr8.2:40422643-40422662 None:intergenic 30.0%
GAAATAGGTATGAAGTATGT+TGG + chr8.2:40419480-40419499 MS.gene25412:intron 30.0%
GACACTATAACATATAAGGA+TGG - chr8.2:40422801-40422820 None:intergenic 30.0%
GTGACATGAATGTAAGAAAA+AGG - chr8.2:40422071-40422090 None:intergenic 30.0%
TAAAATTGGGGACCATATTA+GGG + chr8.2:40420653-40420672 MS.gene25412:intron 30.0%
TAAAATTGGGGACCATATTA+GGG - chr8.2:40420672-40420653 None:intergenic 30.0%
TAAAGTGAATATAGGTCAAG+TGG - chr8.2:40421781-40421800 None:intergenic 30.0%
TAATTAGGTTTAGCAGATAG+AGG - chr8.2:40422204-40422223 None:intergenic 30.0%
TCACCTATTCGAATTTAAGT+TGG - chr8.2:40421976-40421995 None:intergenic 30.0%
TCTCATAATTCAGTATGACA+AGG + chr8.2:40421605-40421624 MS.gene25412:CDS 30.0%
TTAAAATTGGGGACCATATT+AGG + chr8.2:40420652-40420671 MS.gene25412:intron 30.0%
TTAAAATTGGGGACCATATT+AGG - chr8.2:40420671-40420652 None:intergenic 30.0%
TTAAAGGATATAGAGGATGT+TGG + chr8.2:40421798-40421817 MS.gene25412:intron 30.0%
TTAACTCAATTTAACCATGG+TGG + chr8.2:40422467-40422486 MS.gene25412:intron 30.0%
TTAATACTCGAATACAAGCA+TGG - chr8.2:40422247-40422266 None:intergenic 30.0%
TTTACAAAAGTTAATGGAGG+GGG - chr8.2:40419387-40419406 None:intergenic 30.0%
TTTATTCCTTTCCCATAAGA+TGG - chr8.2:40422498-40422517 None:intergenic 30.0%
! AATATGGTCCCCAATTTTAA+GGG + chr8.2:40420053-40420072 MS.gene25412:intron 30.0%
! AATATGGTCCCCAATTTTAA+GGG - chr8.2:40420072-40420053 None:intergenic 30.0%
! ATTGATGGACCCTTAAAATT+GGG - chr8.2:40420065-40420084 None:intergenic 30.0%
! GCTAGTTATGTTTTGCATTA+TGG + chr8.2:40421836-40421855 MS.gene25412:intron 30.0%
! TAATATGGTCCCCAATTTTA+AGG + chr8.2:40420052-40420071 MS.gene25412:intron 30.0%
! TAATATGGTCCCCAATTTTA+AGG - chr8.2:40420071-40420052 None:intergenic 30.0%
! TTTAACTTAAGCTTTAGCGT+GGG + chr8.2:40421641-40421660 MS.gene25412:intron 30.0%
!! ACGAGTTATTTTCTTCTTCT+TGG - chr8.2:40420581-40420600 None:intergenic 30.0%
!! AGTTCCAAAGTTTCTAAGAT+TGG - chr8.2:40420992-40421011 None:intergenic 30.0%
!!! TTTTTGTTTTAACCGGTTGT+AGG - chr8.2:40420107-40420126 None:intergenic 30.0%
AAAATTGGGGACCATATTAG+GGG + chr8.2:40420654-40420673 MS.gene25412:intron 35.0%
AAAATTGGGGACCATATTAG+GGG - chr8.2:40420673-40420654 None:intergenic 35.0%
AACAGATTCACTTTCAGAAG+CGG - chr8.2:40421221-40421240 None:intergenic 35.0%
AAGAGATTACATCTAGACAC+TGG + chr8.2:40420923-40420942 MS.gene25412:CDS 35.0%
AAGTGGGATACAAGACAATT+AGG - chr8.2:40421764-40421783 None:intergenic 35.0%
ATAAGATGGTAATACCACCA+TGG - chr8.2:40422484-40422503 None:intergenic 35.0%
ATGGTGGTATTACCATCTTA+TGG + chr8.2:40422483-40422502 MS.gene25412:intron 35.0%
ATTAAACGTCTAGTGTTTCG+TGG + chr8.2:40421319-40421338 MS.gene25412:CDS 35.0%
CATCGTAGAAATCAAAAGCT+TGG - chr8.2:40419016-40419035 None:intergenic 35.0%
CTGCCAACTTAAATTCGAAT+AGG + chr8.2:40421970-40421989 MS.gene25412:intron 35.0%
CTGTCCAATCTTAGAAACTT+TGG + chr8.2:40420985-40421004 MS.gene25412:CDS 35.0%
GAATACAAGCATGGATACAA+GGG - chr8.2:40422238-40422257 None:intergenic 35.0%
GATAGAGGCAAATCCAAATT+AGG - chr8.2:40422189-40422208 None:intergenic 35.0%
GATTGTCATGAGGAATTGAA+TGG - chr8.2:40420273-40420292 None:intergenic 35.0%
GTATTACCATCTTATGGGAA+AGG + chr8.2:40422489-40422508 MS.gene25412:intron 35.0%
GTTGTAGGAGGTAAGTTAAA+GGG - chr8.2:40420092-40420111 None:intergenic 35.0%
TACGAAGATACACAAACAGT+TGG + chr8.2:40420466-40420485 MS.gene25412:intron 35.0%
TATAACATATAAGGATGGCG+AGG - chr8.2:40422796-40422815 None:intergenic 35.0%
TCTCTATGGTGAGATCTTTA+CGG + chr8.2:40420862-40420881 MS.gene25412:CDS 35.0%
TCTTAGAAATTGTATCCGTC+TGG - chr8.2:40422757-40422776 None:intergenic 35.0%
TGCAGGTTATATCACCATTT+CGG + chr8.2:40421708-40421727 MS.gene25412:intron 35.0%
TGCATTGCCAAATGTGATAT+TGG - chr8.2:40421146-40421165 None:intergenic 35.0%
TGGTGGTATTACCATCTTAT+GGG + chr8.2:40422484-40422503 MS.gene25412:intron 35.0%
TGTAATGTACACAGTCTCTA+TGG + chr8.2:40420848-40420867 MS.gene25412:intron 35.0%
TTATTCGTTGGATTGTCATG+AGG - chr8.2:40420283-40420302 None:intergenic 35.0%
TTGGCAATGCAACTTCTATT+GGG + chr8.2:40421155-40421174 MS.gene25412:CDS 35.0%
TTGGTATGGAGTTGACTAAT+CGG + chr8.2:40419700-40419719 MS.gene25412:intron 35.0%
TTGTAGGAGGTAAGTTAAAG+GGG - chr8.2:40420091-40420110 None:intergenic 35.0%
TTTGGCAATGCAACTTCTAT+TGG + chr8.2:40421154-40421173 MS.gene25412:CDS 35.0%
! CATTGATGGACCCTTAAAAT+TGG - chr8.2:40420066-40420085 None:intergenic 35.0%
! GTTTAACTTAAGCTTTAGCG+TGG + chr8.2:40421640-40421659 MS.gene25412:intron 35.0%
! TTCCTTTTCAACCGAATCTT+TGG + chr8.2:40421012-40421031 MS.gene25412:CDS 35.0%
! TTCGACCATGTTAATTTTGG+TGG + chr8.2:40422097-40422116 MS.gene25412:intron 35.0%
! TTGATGGACCCTTAAAATTG+GGG - chr8.2:40420064-40420083 None:intergenic 35.0%
! TTTAACTTACCTCCTACAAC+CGG + chr8.2:40420092-40420111 MS.gene25412:intron 35.0%
!! CAAAGTTTCTAAGATTGGAC+AGG - chr8.2:40420987-40421006 None:intergenic 35.0%
!! CAATTTTAAGGGTCCATCAA+TGG + chr8.2:40420064-40420083 MS.gene25412:intron 35.0%
!! CGAAGTTATCAAGTTGAGAT+TGG - chr8.2:40419157-40419176 None:intergenic 35.0%
!! GGCAAAGTCTTTGAAATGTT+CGG - chr8.2:40419066-40419085 None:intergenic 35.0%
!!! AGACAATTAGGAGCACTTTT+CGG - chr8.2:40421752-40421771 None:intergenic 35.0%
AAATTGTATCCGTCTGGTGA+AGG - chr8.2:40422751-40422770 None:intergenic 40.0%
AAGAAAAAGCGGTTACCTGA+TGG - chr8.2:40419315-40419334 None:intergenic 40.0%
AAGTTAAAGGGGACCATTGA+TGG - chr8.2:40420080-40420099 None:intergenic 40.0%
AATTTAGGGAGCCCCTAATA+TGG + chr8.2:40420037-40420056 MS.gene25412:intron 40.0%
ACAGAAAAGGGTCGAAAGTA+GGG - chr8.2:40421551-40421570 None:intergenic 40.0%
ACCATTTCGGTATAGTCTCA+CGG + chr8.2:40421721-40421740 MS.gene25412:CDS 40.0%
ACGTACACAACAACAACAAG+TGG - chr8.2:40421434-40421453 None:intergenic 40.0%
AGCCTCACCAATATCACATT+TGG + chr8.2:40421136-40421155 MS.gene25412:CDS 40.0%
ATAAATGGCATGAAATCGGG+AGG - chr8.2:40422326-40422345 None:intergenic 40.0%
ATCTAGAAGAAGGAATGCTC+TGG - chr8.2:40420233-40420252 None:intergenic 40.0%
ATGTGATATTGGTGAGGCTA+AGG - chr8.2:40421135-40421154 None:intergenic 40.0%
ATTATAGGGAGCCCCTAATA+TGG - chr8.2:40420668-40420687 None:intergenic 40.0%
CGAATACAAGCATGGATACA+AGG - chr8.2:40422239-40422258 None:intergenic 40.0%
GAAATGGTGATATAACCTGC+AGG - chr8.2:40421709-40421728 None:intergenic 40.0%
GAAGAACGTCGTACAGAAAA+GGG - chr8.2:40421563-40421582 None:intergenic 40.0%
GATATAACCTGCAGGAAACA+AGG - chr8.2:40421701-40421720 None:intergenic 40.0%
GGCAGAGAGAAGGATATTAA+TGG - chr8.2:40420966-40420985 None:intergenic 40.0%
GGTTGTAGGAGGTAAGTTAA+AGG - chr8.2:40420093-40420112 None:intergenic 40.0%
GTTTCGTGGTTATACAGCAA+AGG + chr8.2:40421333-40421352 MS.gene25412:CDS 40.0%
TAACAGTGTTTGCGAAGGAA+AGG + chr8.2:40420425-40420444 MS.gene25412:intron 40.0%
TACAGAAAAGGGTCGAAAGT+AGG - chr8.2:40421552-40421571 None:intergenic 40.0%
TACGGAATTGGAACAATCCT+CGG + chr8.2:40420880-40420899 MS.gene25412:CDS 40.0%
TAGCTTAACAGTGTTTGCGA+AGG + chr8.2:40420420-40420439 MS.gene25412:intron 40.0%
TAGGGGCTCCCTAAATTATA+AGG - chr8.2:40420034-40420053 None:intergenic 40.0%
TGAAGAACGTCGTACAGAAA+AGG - chr8.2:40421564-40421583 None:intergenic 40.0%
TGCCAAATGTGATATTGGTG+AGG - chr8.2:40421141-40421160 None:intergenic 40.0%
TGGTGAGATCTTTACGGAAT+TGG + chr8.2:40420868-40420887 MS.gene25412:CDS 40.0%
TGTCTTGAGATAAACACACC+TGG + chr8.2:40421100-40421119 MS.gene25412:CDS 40.0%
! ACATCTAGACACTGGTAATG+TGG + chr8.2:40420931-40420950 MS.gene25412:CDS 40.0%
! AGTTTAAATGAGTTGGGCTC+CGG - chr8.2:40419837-40419856 None:intergenic 40.0%
! CAAGGAAATCTAGGATCTGA+GGG + chr8.2:40419902-40419921 MS.gene25412:intron 40.0%
! GCTCTAGATGTAGTAAACAG+CGG - chr8.2:40421521-40421540 None:intergenic 40.0%
! TCAAGGAAATCTAGGATCTG+AGG + chr8.2:40419901-40419920 MS.gene25412:intron 40.0%
!! ACAATGAAAGTTGACTCGGT+TGG + chr8.2:40419681-40419700 MS.gene25412:intron 40.0%
!!! TTGTTTTAACCGGTTGTAGG+AGG - chr8.2:40420104-40420123 None:intergenic 40.0%
AAAAAGTGACCGGCTGTAGT+GGG + chr8.2:40420601-40420620 MS.gene25412:intron 45.0%
ACCGGTGGACCCTTAAAATT+GGG + chr8.2:40420640-40420659 MS.gene25412:intron 45.0%
AGATGAAGATCCTCAAGGTG+GGG - chr8.2:40419221-40419240 None:intergenic 45.0%
ATGGAGTTGACTAATCGGCA+AGG + chr8.2:40419705-40419724 MS.gene25412:intron 45.0%
CACCAAAAAGATCCCCACAT+CGG - chr8.2:40419752-40419771 None:intergenic 45.0%
CCTAAGCTTGGCCAAAGATT+CGG - chr8.2:40421026-40421045 None:intergenic 45.0%
CGAATCTTTGGCCAAGCTTA+GGG + chr8.2:40421024-40421043 MS.gene25412:CDS 45.0%
CTCACAGGTATCTTCATCTC+TGG + chr8.2:40418982-40419001 MS.gene25412:CDS 45.0%
CTTGGAGGAGAGTGAGTAAA+GGG - chr8.2:40421246-40421265 None:intergenic 45.0%
GAGATGAAGATCCTCAAGGT+GGG - chr8.2:40419222-40419241 None:intergenic 45.0%
GATACACAAACAGTTGGACC+TGG + chr8.2:40420472-40420491 MS.gene25412:intron 45.0%
GGATCTGAGGGAGTAGTAAT+TGG + chr8.2:40419914-40419933 MS.gene25412:intron 45.0%
GTAGACTTTCCTTCACCAGA+CGG + chr8.2:40422739-40422758 MS.gene25412:intron 45.0%
GTTTAATGCCAGAGAGAGCT+TGG - chr8.2:40421306-40421325 None:intergenic 45.0%
TAAAAAGTGACCGGCTGTAG+TGG + chr8.2:40420600-40420619 MS.gene25412:intron 45.0%
TATTGGGAACTTGCACAACG+TGG + chr8.2:40421171-40421190 MS.gene25412:CDS 45.0%
TGATGGTAAACAAACAGCCG+AGG - chr8.2:40420900-40420919 None:intergenic 45.0%
TTCAAAGAACCCACTACAGC+CGG - chr8.2:40420613-40420632 None:intergenic 45.0%
! AACATATGTTGGTGCTCCCT+GGG + chr8.2:40419785-40419804 MS.gene25412:intron 45.0%
! AGTTGTACCTTGTTTCCTGC+AGG + chr8.2:40421691-40421710 MS.gene25412:intron 45.0%
! GGCCAAAGATTCGGTTGAAA+AGG - chr8.2:40421017-40421036 None:intergenic 45.0%
! GGTTCTTTGAAGAGGTTCAC+CGG + chr8.2:40420622-40420641 MS.gene25412:intron 45.0%
! TCTTGATGGCTTGATGCAGT+TGG + chr8.2:40420514-40420533 MS.gene25412:intron 45.0%
!! CTGTAGTGGGTTCTTTGAAG+AGG + chr8.2:40420614-40420633 MS.gene25412:intron 45.0%
!! GAAAGTTGACTCGGTTGGTA+TGG + chr8.2:40419686-40419705 MS.gene25412:intron 45.0%
!! TTAGTTAATAATAAATTATA+GGG - chr8.2:40420682-40420701 None:intergenic 5.0%
!! TTTAGTTAATAATAAATTAT+AGG - chr8.2:40420683-40420702 None:intergenic 5.0%
AAAGCGGTTACCTGATGGAG+AGG - chr8.2:40419310-40419329 None:intergenic 50.0%
ACCTGATGGAGAGGAGGTTA+GGG - chr8.2:40419301-40419320 None:intergenic 50.0%
AGAGGAGGTTAGGGCATGAT+AGG - chr8.2:40419292-40419311 None:intergenic 50.0%
AGATTGGACAGGCAGAGAGA+AGG - chr8.2:40420976-40420995 None:intergenic 50.0%
CAACAATGCCAGAGAGAGCT+TGG - chr8.2:40421264-40421283 None:intergenic 50.0%
CACCGGTGGACCCTTAAAAT+TGG + chr8.2:40420639-40420658 MS.gene25412:intron 50.0%
CCGAATCTTTGGCCAAGCTT+AGG + chr8.2:40421023-40421042 MS.gene25412:CDS 50.0%
CCGGTGGACCCTTAAAATTG+GGG + chr8.2:40420641-40420660 MS.gene25412:intron 50.0%
CGAGATGAAGATCCTCAAGG+TGG - chr8.2:40419223-40419242 None:intergenic 50.0%
GAATACTACCCCGATGTCGA+CGG + chr8.2:40419035-40419054 MS.gene25412:CDS 50.0%
GAGCGAGATGAAGATCCTCA+AGG - chr8.2:40419226-40419245 None:intergenic 50.0%
GCCGTGAGACTATACCGAAA+TGG - chr8.2:40421725-40421744 None:intergenic 50.0%
GCTTGGAGGAGAGTGAGTAA+AGG - chr8.2:40421247-40421266 None:intergenic 50.0%
GGAAGATGGAACCCTAAGCT+TGG - chr8.2:40421038-40421057 None:intergenic 50.0%
TAATGCCAGAGAGAGCTTGG+AGG - chr8.2:40421303-40421322 None:intergenic 50.0%
TACCTGATGGAGAGGAGGTT+AGG - chr8.2:40419302-40419321 None:intergenic 50.0%
TAGAGGATGTTGGCGTGAGA+TGG + chr8.2:40421808-40421827 MS.gene25412:intron 50.0%
! AGGCTAAGGTACTTGAGACC+AGG - chr8.2:40421121-40421140 None:intergenic 50.0%
! CGATGTGGGGATCTTTTTGG+TGG + chr8.2:40419750-40419769 MS.gene25412:intron 50.0%
! GAACATATGTTGGTGCTCCC+TGG + chr8.2:40419784-40419803 MS.gene25412:intron 50.0%
! TCTTTGAAGAGGTTCACCGG+TGG + chr8.2:40420625-40420644 MS.gene25412:intron 50.0%
!! CCCCAATTTTAAGGGTCCAC+CGG - chr8.2:40420644-40420663 None:intergenic 50.0%
!! GAGGACGGCATTGACGAATA+TGG - chr8.2:40419087-40419106 None:intergenic 50.0%
AAAGATCCCCACATCGGCCA+TGG - chr8.2:40419746-40419765 None:intergenic 55.0%
AAGATCCCCACATCGGCCAT+GGG - chr8.2:40419745-40419764 None:intergenic 55.0%
AAGCTCACCGACATCAACGC+AGG - chr8.2:40419814-40419833 None:intergenic 55.0%
ACATCAACGCAGGTCACCCA+GGG - chr8.2:40419804-40419823 None:intergenic 55.0%
ACGCATCTTCCGAATGTCGC+GGG - chr8.2:40419123-40419142 None:intergenic 55.0%
ACTCTCCTCCAAGCTCTCTC+TGG + chr8.2:40421253-40421272 MS.gene25412:CDS 55.0%
ATCAACTCCCATGGCCGATG+TGG + chr8.2:40419735-40419754 MS.gene25412:intron 55.0%
ATGCCGTCCTCTCTCTACGA+AGG + chr8.2:40419096-40419115 MS.gene25412:CDS 55.0%
CAATGCCAGAGAGAGCTTGG+AGG - chr8.2:40421261-40421280 None:intergenic 55.0%
CGGAAGATGCGTCTCTCTTG+CGG + chr8.2:40419131-40419150 MS.gene25412:CDS 55.0%
CGTTGATGTCGGTGAGCTTC+CGG + chr8.2:40419815-40419834 MS.gene25412:intron 55.0%
CTCGCTCTCTTCTCGTCTGA+GGG + chr8.2:40419239-40419258 MS.gene25412:CDS 55.0%
CTCTTCTCGTCTGAGGGTGA+CGG + chr8.2:40419245-40419264 MS.gene25412:CDS 55.0%
CTGAACGCTCTGTTGACACG+TGG + chr8.2:40419177-40419196 MS.gene25412:CDS 55.0%
GACGCATCTTCCGAATGTCG+CGG - chr8.2:40419124-40419143 None:intergenic 55.0%
GGTCCTTCGTAGAGAGAGGA+CGG - chr8.2:40419102-40419121 None:intergenic 55.0%
TACGAAGGACCCGCGACATT+CGG + chr8.2:40419111-40419130 MS.gene25412:CDS 55.0%
TCAACTCCCATGGCCGATGT+GGG + chr8.2:40419736-40419755 MS.gene25412:intron 55.0%
TCTCGCTCTCTTCTCGTCTG+AGG + chr8.2:40419238-40419257 MS.gene25412:CDS 55.0%
TGGCAGACAGTAGATCCCCT+TGG - chr8.2:40421956-40421975 None:intergenic 55.0%
TGGGAACTTGCACAACGTGG+AGG + chr8.2:40421174-40421193 MS.gene25412:CDS 55.0%
! GGCCATGGGAGTTGATCTCA+CGG - chr8.2:40419731-40419750 None:intergenic 55.0%
! GGCCGATGTGGGGATCTTTT+TGG + chr8.2:40419747-40419766 MS.gene25412:intron 55.0%
! TGGGTGACCTGCGTTGATGT+CGG + chr8.2:40419804-40419823 MS.gene25412:intron 55.0%
CAACTCCCATGGCCGATGTG+GGG + chr8.2:40419737-40419756 MS.gene25412:intron 60.0%
CGGCTTCAAACTCCCTCTCG+CGG + chr8.2:40419265-40419284 MS.gene25412:CDS 60.0%
GACATCAACGCAGGTCACCC+AGG - chr8.2:40419805-40419824 None:intergenic 60.0%
GCCCTAACCTCCTCTCCATC+AGG + chr8.2:40419297-40419316 MS.gene25412:CDS 60.0%
GCGGTTACCTGATGGAGAGG+AGG - chr8.2:40419307-40419326 None:intergenic 60.0%
GGATGGCGAGGAGCAGAGTA+AGG - chr8.2:40422784-40422803 None:intergenic 60.0%
GGCATGATAGGACCGCGAGA+GGG - chr8.2:40419280-40419299 None:intergenic 60.0%
GGCCGTGAGATCAACTCCCA+TGG + chr8.2:40419726-40419745 MS.gene25412:intron 60.0%
ACGTGGATCCGCACCGCAGT+TGG + chr8.2:40419194-40419213 MS.gene25412:CDS 65.0%
CGCGGGTCCTTCGTAGAGAG+AGG - chr8.2:40419106-40419125 None:intergenic 65.0%
CGTGGATCCGCACCGCAGTT+GGG + chr8.2:40419195-40419214 MS.gene25412:CDS 65.0%
CTCAAGGTGGGGCCCAACTG+CGG - chr8.2:40419210-40419229 None:intergenic 65.0%
GGGCATGATAGGACCGCGAG+AGG - chr8.2:40419281-40419300 None:intergenic 65.0%
TTCGGCCTCGCCGTCGACAT+CGG - chr8.2:40419048-40419067 None:intergenic 65.0%
CGCAGTTGGGCCCCACCTTG+AGG + chr8.2:40419208-40419227 MS.gene25412:CDS 70.0%
CTACCCCGATGTCGACGGCG+AGG + chr8.2:40419040-40419059 MS.gene25412:CDS 70.0%
TCGGCCTCGCCGTCGACATC+GGG - chr8.2:40419047-40419066 None:intergenic 70.0%
CGGCCTCGCCGTCGACATCG+GGG - chr8.2:40419046-40419065 None:intergenic 75.0%
GGTGGGGCCCAACTGCGGTG+CGG - chr8.2:40419205-40419224 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 40418969 40422868 40418969 ID=MS.gene25412
chr8.2 mRNA 40418969 40422868 40418969 ID=MS.gene25412.t1;Parent=MS.gene25412
chr8.2 exon 40418969 40419318 40418969 ID=MS.gene25412.t1.exon1;Parent=MS.gene25412.t1
chr8.2 CDS 40418969 40419318 40418969 ID=cds.MS.gene25412.t1;Parent=MS.gene25412.t1
chr8.2 exon 40420862 40421354 40420862 ID=MS.gene25412.t1.exon2;Parent=MS.gene25412.t1
chr8.2 CDS 40420862 40421354 40420862 ID=cds.MS.gene25412.t1;Parent=MS.gene25412.t1
chr8.2 exon 40421462 40421626 40421462 ID=MS.gene25412.t1.exon3;Parent=MS.gene25412.t1
chr8.2 CDS 40421462 40421626 40421462 ID=cds.MS.gene25412.t1;Parent=MS.gene25412.t1
chr8.2 exon 40421713 40421772 40421713 ID=MS.gene25412.t1.exon4;Parent=MS.gene25412.t1
chr8.2 CDS 40421713 40421772 40421713 ID=cds.MS.gene25412.t1;Parent=MS.gene25412.t1
chr8.2 exon 40422743 40422868 40422743 ID=MS.gene25412.t1.exon5;Parent=MS.gene25412.t1
chr8.2 CDS 40422743 40422868 40422743 ID=cds.MS.gene25412.t1;Parent=MS.gene25412.t1
Gene Sequence

>MS.gene25412

ATGAGTCTTGTTTCTCACAGGTATCTTCATCTCTGGAAACATCTCCAAGCTTTTGATTTCTACGATGAATACTACCCCGATGTCGACGGCGAGGCCGAACATTTCAAAGACTTTGCCATATTCGTCAATGCCGTCCTCTCTCTACGAAGGACCCGCGACATTCGGAAGATGCGTCTCTCTTGCGGCCAATCTCAACTTGATAACTTCGCTGAACGCTCTGTTGACACGTGGATCCGCACCGCAGTTGGGCCCCACCTTGAGGATCTTCATCTCGCTCTCTTCTCGTCTGAGGGTGACGGCTTCAAACTCCCTCTCGCGGTCCTATCATGCCCTAACCTCCTCTCCATCAGGTAACCGCTTTTTCTTCTTATTCATATTTGAGTAATAACAGTATTTATTTTAGTCTTTTTTATAACCCCCTCCATTAACTTTTGTAAAAAATTTCTCCTATTTACTTATCATTTTCAATGTCATTGTTTTCGCAATAATACTCTTGTTTATTTGTTAGGGAGAAATAGGTATGAAGTATGTTGGGATAACAAATGATTAAAATTATTTTATGAAAAAGTAACAAGATTTATTGATTATTTTCAATGTTGTTTTCTCAATAATACTCTTGTTTATTTGTTAGGTAGAAATAGGTATGAAGTATGATGCGATAACAAATGATTAAAATTATTTTATGAAAAAGTAACAAGATTTATTGATTTTAACAATGAAAGTTGACTCGGTTGGTATGGAGTTGACTAATCGGCAAGGCCGTGAGATCAACTCCCATGGCCGATGTGGGGATCTTTTTGGTGGTTGATGTATATGAACATATGTTGGTGCTCCCTGGGTGACCTGCGTTGATGTCGGTGAGCTTCCGGAGCCCAACTCATTTAAACTTTATAAAAAAACATTTATTGATTGTTTTGTTATATGAAAATAACTCAAGGAAATCTAGGATCTGAGGGAGTAGTAATTGGTGATTTTATGATTATACTAGTGAAGCAAAGACATTTTCAATTAACAAACCAATTAATTAAAGATATGAATTTACAAAAATTACAGTCTTTTAGTCCTTATAATTTAGGGAGCCCCTAATATGGTCCCCAATTTTAAGGGTCCATCAATGGTCCCCTTTAACTTACCTCCTACAACCGGTTAAAACAAAAATTTGTTTCATGGTCCCACAGCAAAAAAAATCTTCTTTAAAGCAAGTATGAGCTATTACTTTTATGTCCTTGAATATAAGTCTAAAATCTCTATCTGTTGATGTCCAGAGCATTCCTTCTTCTAGATCTGAAAATTTTCAGTAGCCATTCAATTCCTCATGACAATCCAACGAATAATAACTTTTCTATGTAGAATGAGGTGAATAAACTTGTTGTTGTGAAAAGAGAAACAAAAGATTGTGAATATTGAATATAATTGATTAAAGGATGATTGGTCTGAAAATATGATAACAATAGCTTAACAGTGTTTGCGAAGGAAAGGCAAGTCCAAAAAAAGTGTTACGAAGATACACAAACAGTTGGACCTGGAGTTTTTTTGTGTGTTTTATCTTGATGGCTTGATGCAGTTGGATTTTATTCCTAATTTTACAAATTAACTCATAAAATTGTAACCAAGAAGAAGAAAATAACTCGTAAAAAGTGACCGGCTGTAGTGGGTTCTTTGAAGAGGTTCACCGGTGGACCCTTAAAATTGGGGACCATATTAGGGGCTCCCTATAATTTATTATTAACTAAAAAGTGAGTAGAGGCTTAGAAATATAATTAGTAAACAAGAAGGTAATTTAGAGCTACAAAGATATTTCAGTCATTTTTTTTACTTATTATTTGCAAACTTGTTCTTGTTAAATGTGACATGATAAATGATGATAACATAAGATTTGTGTAATGTACACAGTCTCTATGGTGAGATCTTTACGGAATTGGAACAATCCTCGGCTGTTTGTTTACCATCATTGAAGAGATTACATCTAGACACTGGTAATGTGGATGTGAATGCCATTAATATCCTTCTCTCTGCCTGTCCAATCTTAGAAACTTTGGAACTTTCCTTTTCAACCGAATCTTTGGCCAAGCTTAGGGTTCCATCTTCCTTGAAAAGTTTTAAATTTACTATAGAGAATGACATTGAAGTTTGTCTTGAGATAAACACACCTGGTCTCAAGTACCTTAGCCTCACCAATATCACATTTGGCAATGCAACTTCTATTGGGAACTTGCACAACGTGGAGGAAGCATATCTTGATGTACTCTCCGCTTCTGAAAGTGAATCTGTTGACCCTTTACTCACTCTCCTCCAAGCTCTCTCTGGCATTGTTGACCCTTTACTCACTCTCCTCCAAGCTCTCTCTGGCATTAAACGTCTAGTGTTTCGTGGTTATACAGCAAAGGTGAGTGATATTTTCATTATCCTTGTGTATTATATATTCCATTATATGTAATAGTTTTGTGCTAATTCTTGTATCTCCACTTGTTGTTGTTGTGTACGTAACAAAAGAGATTACTTGGTAGTCAACCTTCTATAGATTTTTCGAAAATGCACTTTTCGGAATTCCGCTGTTTACTACATCTAGAGCTCATTGTCCCTACTTTCGACCCTTTTCTGTACGACGTTCTTCAGAAATGTCCTATACTTCAAGCTCTCATAATTCAGTATGACAAGGTTCGTAAATAGAGTTTAACTTAAGCTTTAGCGTGGGTGTATGTTTTTGTTTGATTATTTGGTGAGTTGTACCTTGTTTCCTGCAGGTTATATCACCATTTCGGTATAGTCTCACGGCAAAGCCGAAAAGTGCTCCTAATTGTCTTGTATCCCACTTGACCTATATTCACTTTAAAGGATATAGAGGATGTTGGCGTGAGATGGACTTTGCTAGTTATGTTTTGCATTATGGACTTGTTTTGAAGACAATGCATATTTCTGTTTTTTTATCGGATGAAAGCAAGAAGTCGACAAAGTACCAAATAATCAGAAAATTTTCAAATATGCCAAGGGGATCTACTGTCTGCCAACTTAAATTCGAATAGGTGAGAACTCTCACCATCTTTATTCTACTGTGCTTTCTGAATAAAAAAATGATGTTTAATTCGCACAATTAGTTTCCCTTTTTCTTACATTCATGTCACCACATTTTCGACCATGTTAATTTTGGTGGAATTGCAATGCATACCCTTCAATGTATCTAATTTTTCTATGATCTAGTTATTTTCTCATAGTTAAACCTAATTTGGATTTGCCTCTATCTGCTAAACCTAATTAATCTAGTTCTACCCTTGTATCCATGCTTGTATTCGAGTATTAAGATCATAGAAAATTATGACATTTACATGCTTACTAAATTTGAAGGAATTTGTTTTTCCTCCCGATTTCATGCCATTTATTGTGAATTAACTTGGTAATTTTGCATTGTGAGTTCTTTTTTGTAATTAGTAATAATAGTAGTATATCTGTGTAAAAATAGTAGTAATAATAGGCCAGTTTTTTTTTTTTTCTTGGTTGCATTTAACTCAATTTAACCATGGTGGTATTACCATCTTATGGGAAAGGAATAAATTTTTATGTTCATGTATCAGTTAAGAATTTTTTAACTTCTGGGTTCTACCATATTTTTTATTTTCTACTTTCTACAAATGTATTTTATATAGGAAGTTATATTATGATGTGGTTGTCATTGACCAAATATTACTATAGAAACCCGTTAAAATGATAGAAATGAATGAAAATATAGACTGATCTTTACTGATGAGCTAAAAGAATTACCTGAGTTATTTATTGTAGACTTTCCTTCACCAGACGGATACAATTTCTAAGATATTCCTTACTCTGCTCCTCGCCATCCTTATATGTTATAGTGTCAGAACGAGTTTCATCATTTATGGCTCTCCTATTTCTGCTAACCAATAG
Protein sequence

>MS.gene25412.t1

MSLVSHRYLHLWKHLQAFDFYDEYYPDVDGEAEHFKDFAIFVNAVLSLRRTRDIRKMRLSCGQSQLDNFAERSVDTWIRTAVGPHLEDLHLALFSSEGDGFKLPLAVLSCPNLLSISLYGEIFTELEQSSAVCLPSLKRLHLDTGNVDVNAINILLSACPILETLELSFSTESLAKLRVPSSLKSFKFTIENDIEVCLEINTPGLKYLSLTNITFGNATSIGNLHNVEEAYLDVLSASESESVDPLLTLLQALSGIVDPLLTLLQALSGIKRLVFRGYTAKRLLGSQPSIDFSKMHFSEFRCLLHLELIVPTFDPFLYDVLQKCPILQALIIQYDKVISPFRYSLTAKPKSAPNCLTFLHQTDTISKIFLTLLLAILICYSVRTSFIIYGSPISANQ