AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34735


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34735.t1 MTR_8g468810 80.000 465 90 2 1 464 1 463 0.0 744
MS.gene34735.t1 MTR_8g468810 82.574 373 62 2 1 372 1 371 0.0 609
MS.gene34735.t1 MTR_8g058970 62.940 483 154 5 1 464 1 477 0.0 568
MS.gene34735.t1 MTR_8g468810 83.387 313 50 1 1 313 1 311 0.0 521
MS.gene34735.t1 MTR_8g468810 83.387 313 50 1 1 313 1 311 0.0 521
MS.gene34735.t1 MTR_8g468810 83.387 313 50 1 1 313 1 311 0.0 520
MS.gene34735.t1 MTR_2g083840 53.390 472 197 8 1 464 1 457 4.28e-156 451
MS.gene34735.t1 MTR_4g032730 47.718 482 206 10 11 463 2 466 3.37e-132 390
MS.gene34735.t1 MTR_8g062270 49.339 454 199 13 25 463 16 453 1.58e-125 372
MS.gene34735.t1 MTR_8g468760 49.893 467 171 15 11 463 1 418 8.58e-122 362
MS.gene34735.t1 MTR_5g092960 49.049 473 207 13 10 463 4 461 1.07e-120 360
MS.gene34735.t1 MTR_8g468840 48.438 448 210 10 24 462 13 448 3.91e-119 356
MS.gene34735.t1 MTR_8g467800 48.101 474 209 14 5 464 3 453 3.21e-118 354
MS.gene34735.t1 MTR_8g014260 44.000 475 228 17 2 464 3 451 3.53e-107 325
MS.gene34735.t1 MTR_8g445780 44.630 419 197 11 1 414 1 389 1.29e-93 288
MS.gene34735.t1 MTR_8g469020 41.087 460 236 13 25 464 7 451 1.07e-92 288
MS.gene34735.t1 MTR_8g058965 41.239 468 245 11 12 464 4 456 3.14e-92 287
MS.gene34735.t1 MTR_5g092960 49.602 377 167 10 10 372 4 371 1.27e-90 281
MS.gene34735.t1 MTR_8g070950 39.834 482 224 14 1 464 1 434 1.02e-89 280
MS.gene34735.t1 MTR_4g050250 43.155 431 203 12 2 406 4 418 1.73e-88 276
MS.gene34735.t1 MTR_8g062010 39.732 448 242 12 22 464 6 430 2.11e-80 256
MS.gene34735.t1 MTR_8g467800 51.420 317 138 8 5 316 3 308 4.27e-79 249
MS.gene34735.t1 MTR_8g062080 38.377 456 244 13 19 464 17 445 1.95e-78 251
MS.gene34735.t1 MTR_8g062310 36.853 464 249 14 4 464 6 428 3.35e-73 237
MS.gene34735.t1 MTR_8g062300 36.345 498 259 16 2 464 3 477 1.13e-70 232
MS.gene34735.t1 MTR_8g014160 34.934 458 225 12 16 464 32 425 2.53e-70 229
MS.gene34735.t1 MTR_8g467790 37.215 395 182 13 25 404 148 491 1.59e-59 203
MS.gene34735.t1 MTR_4g024710 42.193 301 160 8 167 464 58 347 8.33e-58 194
MS.gene34735.t1 MTR_4g024745 41.259 286 154 8 165 447 10 284 1.05e-47 166
MS.gene34735.t1 MTR_8g014210 43.568 241 126 6 224 464 1 231 6.74e-46 159
MS.gene34735.t1 MTR_8g077460 42.609 230 125 5 17 241 2 229 8.86e-46 163
MS.gene34735.t1 MTR_8g077460 33.209 268 150 9 205 464 129 375 7.46e-29 117
MS.gene34735.t1 MTR_5g021550 52.663 169 70 5 1 166 1 162 1.80e-43 150
MS.gene34735.t1 MTR_5g080710 29.490 451 276 16 25 463 33 453 2.96e-33 131
MS.gene34735.t1 MTR_8g014290 44.375 160 79 5 17 167 2 160 1.34e-32 122
MS.gene34735.t1 MTR_4g056040 30.556 468 255 19 20 438 4 450 2.35e-30 123
MS.gene34735.t1 MTR_5g084070 28.935 432 255 16 5 426 2 391 1.07e-28 117
MS.gene34735.t1 MTR_4g024720 39.572 187 81 8 1 166 1 176 2.46e-28 111
MS.gene34735.t1 MTR_2g086020 28.125 416 196 12 51 464 1 315 1.04e-25 107
MS.gene34735.t1 MTR_4g055990 28.092 477 267 17 20 439 4 461 1.63e-25 109
MS.gene34735.t1 MTR_4g055990 28.092 477 267 17 20 439 4 461 1.72e-25 109
MS.gene34735.t1 MTR_4g056070 28.855 454 243 16 20 414 4 436 3.62e-25 107
MS.gene34735.t1 MTR_4g056030 29.167 432 258 17 20 428 4 410 9.98e-25 106
MS.gene34735.t1 MTR_8g014220 36.279 215 75 7 2 211 3 160 1.20e-24 100
MS.gene34735.t1 MTR_4g056020 29.508 427 265 18 20 429 4 411 1.02e-23 103
MS.gene34735.t1 MTR_1g041245 35.714 196 108 5 25 216 11 192 1.46e-23 102
MS.gene34735.t1 MTR_7g115270 25.054 459 265 15 18 461 5 399 2.08e-23 102
MS.gene34735.t1 MTR_3g108150 26.407 462 243 16 18 463 6 386 8.17e-23 100
MS.gene34735.t1 MTR_7g098510 25.551 454 252 13 21 464 14 391 6.70e-22 97.8
MS.gene34735.t1 MTR_4g113810 36.471 170 101 5 107 271 1 168 1.72e-21 91.7
MS.gene34735.t1 MTR_4g055580 27.447 470 253 18 20 428 95 537 1.71e-20 94.7
MS.gene34735.t1 MTR_5g008950 25.721 451 236 19 27 464 1 365 2.38e-20 92.8
MS.gene34735.t1 MTR_1g038710 27.700 426 268 14 25 428 19 426 2.54e-20 93.6
MS.gene34735.t1 MTR_7g056447 33.624 229 121 11 20 237 4 212 4.56e-20 90.5
MS.gene34735.t1 MTR_3g108560 27.171 449 231 18 24 459 19 384 7.66e-20 91.7
MS.gene34735.t1 MTR_7g056430 25.951 447 228 16 22 458 6 359 1.47e-19 92.4
MS.gene34735.t1 MTR_7g056420 26.174 447 227 16 22 458 6 359 1.66e-19 92.4
MS.gene34735.t1 MTR_3g023630 26.949 449 229 17 22 457 5 367 2.04e-19 90.1
MS.gene34735.t1 MTR_3g107120 27.632 456 239 16 23 461 7 388 2.74e-19 90.1
MS.gene34735.t1 MTR_3g107160 24.561 456 254 16 21 464 6 383 6.49e-19 88.6
MS.gene34735.t1 MTR_7g032380 35.122 205 113 8 17 216 3 192 3.87e-18 85.9
MS.gene34735.t1 MTR_1089s0010 25.435 460 235 20 25 464 8 379 1.21e-17 84.7
MS.gene34735.t1 MTR_5g058100 25.778 450 262 15 18 463 2 383 1.50e-17 84.7
MS.gene34735.t1 MTR_6g022500 26.652 454 243 20 21 461 97 473 2.04e-17 84.7
MS.gene34735.t1 MTR_7g026500 24.473 474 263 13 1 461 1 392 3.83e-17 83.6
MS.gene34735.t1 MTR_3g107100 32.178 202 120 7 19 216 5 193 8.23e-17 82.4
MS.gene34735.t1 MTR_3g109982 27.766 479 280 22 24 457 12 469 7.61e-16 80.9
MS.gene34735.t1 MTR_8g085430 30.337 267 141 10 21 273 7 242 1.06e-15 78.6
MS.gene34735.t1 MTR_3g036250 31.472 197 117 5 25 216 5 188 1.10e-15 79.0
MS.gene34735.t1 MTR_7g034110 33.333 228 115 12 23 238 9 211 1.16e-15 78.6
MS.gene34735.t1 MTR_3g040700 28.365 208 131 5 14 216 32 226 1.26e-15 79.3
MS.gene34735.t1 MTR_2g072720 24.395 496 305 17 1 451 1 471 1.74e-15 79.0
MS.gene34735.t1 MTR_3g087260 26.501 483 275 19 24 463 11 456 1.84e-15 79.0
MS.gene34735.t1 MTR_2g007500 32.512 203 110 6 20 218 9 188 3.13e-15 77.0
MS.gene34735.t1 MTR_3g071850 25.734 443 259 16 22 456 21 401 3.52e-15 78.6
MS.gene34735.t1 MTR_5g073420 33.505 194 117 7 25 215 11 195 3.96e-15 77.4
MS.gene34735.t1 MTR_5g008920 34.000 200 110 8 22 215 6 189 4.68e-15 77.0
MS.gene34735.t1 MTR_2g008320 32.178 202 114 7 25 218 52 238 1.36e-14 75.9
MS.gene34735.t1 MTR_1g108820 26.351 444 252 17 25 461 8 383 2.42e-14 74.7
MS.gene34735.t1 MTR_7g034115 33.654 208 110 9 25 223 11 199 4.84e-14 73.9
MS.gene34735.t1 MTR_6g011460 25.272 459 258 17 15 464 39 421 1.14e-13 73.2
MS.gene34735.t1 MTR_4g093690 29.455 275 163 10 25 285 18 275 1.19e-13 71.6
MS.gene34735.t1 MTR_4g024770 51.429 70 24 2 2 71 10 69 2.85e-13 65.5
MS.gene34735.t1 MTR_7g056433 31.500 200 125 6 24 221 11 200 2.89e-13 71.6
MS.gene34735.t1 MTR_7g088260 30.806 211 131 5 6 215 72 268 3.55e-13 71.6
MS.gene34735.t1 MTR_2g008310 24.558 452 247 18 25 464 2 371 4.47e-13 71.2
MS.gene34735.t1 MTR_4g080773 26.316 437 265 17 25 427 19 432 4.54e-13 71.6
MS.gene34735.t1 MTR_4g098590 33.333 201 118 7 27 218 1 194 4.99e-13 70.9
MS.gene34735.t1 MTR_4g080773 26.712 438 262 18 25 427 19 432 6.33e-13 70.9
MS.gene34735.t1 MTR_6g045333 24.215 446 276 16 22 463 58 445 1.21e-12 70.1
MS.gene34735.t1 MTR_3g099830 28.365 208 114 8 18 218 5 184 1.31e-12 69.3
MS.gene34735.t1 MTR_7g114710 31.250 208 121 8 25 226 13 204 2.16e-12 68.6
MS.gene34735.t1 MTR_5g083890 31.776 214 118 8 24 218 5 209 4.28e-12 68.6
MS.gene34735.t1 MTR_8g014230 48.000 75 35 2 380 454 25 95 4.31e-12 62.8
MS.gene34735.t1 MTR_7g033990 31.132 212 117 9 20 220 6 199 4.85e-12 68.2
MS.gene34735.t1 MTR_2g100590 27.551 196 136 3 25 217 42 234 5.12e-12 67.8
MS.gene34735.t1 MTR_4g134150 30.085 236 127 10 24 244 13 225 5.66e-12 65.9
MS.gene34735.t1 MTR_6g044560 30.833 240 125 12 7 217 161 388 6.28e-12 68.2
MS.gene34735.t1 MTR_2g100590 27.551 196 136 3 25 217 42 234 6.35e-12 67.8
MS.gene34735.t1 MTR_2g100590 27.551 196 136 3 25 217 42 234 7.58e-12 67.8
MS.gene34735.t1 MTR_7g032370 33.333 183 105 7 37 216 2 170 9.21e-12 66.6
MS.gene34735.t1 MTR_3g048290 27.021 433 265 18 25 429 23 432 1.16e-11 67.0
MS.gene34735.t1 MTR_5g061680 32.474 194 117 7 25 215 11 193 4.52e-11 64.3
MS.gene34735.t1 MTR_6g044572 30.631 222 114 11 25 217 2 212 4.57e-11 64.7
MS.gene34735.t1 MTR_7g033945 31.892 185 101 7 20 195 6 174 4.74e-11 62.0
MS.gene34735.t1 MTR_4g080787 25.346 434 274 20 25 429 19 431 8.88e-11 64.3
MS.gene34735.t1 MTR_7g033915 30.151 199 106 7 23 217 9 178 8.96e-11 63.9
MS.gene34735.t1 MTR_5g087940 29.455 275 143 14 1 261 10 247 9.89e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34735.t1 AT1G16930 29.243 489 271 20 11 464 1 449 9.88e-34 132
MS.gene34735.t1 AT1G16930 29.243 489 271 20 11 464 1 449 9.88e-34 132
MS.gene34735.t1 AT1G16930 29.243 489 271 20 11 464 1 449 9.88e-34 132
MS.gene34735.t1 AT4G26340 29.736 454 269 17 25 464 2 419 6.92e-33 129
MS.gene34735.t1 AT1G78750 27.948 458 289 16 25 461 18 455 5.01e-30 122
MS.gene34735.t1 AT1G78750 27.948 458 289 16 25 461 18 455 5.01e-30 122
MS.gene34735.t1 AT1G78760 27.813 471 280 22 15 461 6 440 7.83e-28 115
MS.gene34735.t1 AT2G04230 29.535 430 250 17 23 430 11 409 2.10e-27 114
MS.gene34735.t1 AT5G56420 26.882 465 273 18 22 464 3 422 4.22e-27 113
MS.gene34735.t1 AT5G56420 26.882 465 273 18 22 464 3 422 4.22e-27 113
MS.gene34735.t1 AT5G56420 26.882 465 273 18 22 464 3 422 4.22e-27 113
MS.gene34735.t1 AT5G38590 28.537 417 245 15 25 426 2 380 2.20e-26 110
MS.gene34735.t1 AT4G10400 27.876 452 268 21 25 463 2 408 2.68e-26 110
MS.gene34735.t1 AT4G10400 27.876 452 268 21 25 463 2 408 2.68e-26 110
MS.gene34735.t1 AT4G10400 27.876 452 268 21 25 463 2 408 2.68e-26 110
MS.gene34735.t1 AT1G51370 28.355 462 260 23 24 461 18 432 8.17e-26 109
MS.gene34735.t1 AT4G13985 26.955 486 284 18 12 461 6 456 1.01e-25 109
MS.gene34735.t1 AT1G66300 28.310 491 278 22 2 461 6 453 1.05e-25 109
MS.gene34735.t1 AT5G60610 28.037 428 244 16 25 430 2 387 7.13e-25 106
MS.gene34735.t1 AT5G60610 28.037 428 244 16 25 430 2 387 7.13e-25 106
MS.gene34735.t1 AT5G22730 28.862 492 263 23 13 461 16 463 8.09e-25 107
MS.gene34735.t1 AT5G22730 28.862 492 263 23 13 461 16 463 8.09e-25 107
MS.gene34735.t1 AT3G50710 27.549 461 278 18 25 464 2 427 1.01e-24 106
MS.gene34735.t1 AT5G53635 26.915 457 281 17 27 463 2 425 2.14e-24 105
MS.gene34735.t1 AT5G38570 27.840 449 239 17 25 463 2 375 2.22e-24 104
MS.gene34735.t1 AT1G69630 27.158 475 279 24 17 461 11 448 3.05e-24 105
MS.gene34735.t1 AT5G56370 27.766 461 269 19 25 463 2 420 5.52e-24 104
MS.gene34735.t1 AT5G56370 27.766 461 269 19 25 463 2 420 5.52e-24 104
MS.gene34735.t1 AT1G32375 27.609 460 274 18 25 464 2 422 1.72e-23 102
MS.gene34735.t1 AT1G32375 27.609 460 274 18 25 464 2 422 1.72e-23 102
MS.gene34735.t1 AT2G26030 29.263 475 262 23 23 461 2 438 2.88e-23 102
MS.gene34735.t1 AT2G26030 29.263 475 262 23 23 461 2 438 2.88e-23 102
MS.gene34735.t1 AT1G80470 26.247 461 281 21 22 461 12 434 4.23e-23 102
MS.gene34735.t1 AT5G38590 31.579 266 160 10 25 283 2 252 6.73e-23 99.0
MS.gene34735.t1 AT5G22720 28.180 511 272 24 1 463 1 464 1.10e-22 100
MS.gene34735.t1 AT5G22670 31.090 431 240 22 22 426 8 407 1.70e-22 100
MS.gene34735.t1 AT5G62970 27.586 464 288 18 25 460 2 445 2.40e-22 99.8
MS.gene34735.t1 AT1G55660 25.983 458 297 18 25 461 53 489 3.76e-22 99.4
MS.gene34735.t1 AT5G53840 26.981 467 294 19 11 461 2 437 4.12e-22 99.0
MS.gene34735.t1 AT1G06630 30.719 306 184 11 24 316 11 301 4.71e-22 96.7
MS.gene34735.t1 AT3G58920 24.850 499 284 19 25 464 2 468 1.28e-21 97.8
MS.gene34735.t1 AT1G06630 29.363 361 221 13 24 369 11 352 1.34e-21 96.3
MS.gene34735.t1 AT1G06630 29.363 361 221 13 24 369 11 352 1.34e-21 96.3
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 11 353 1.48e-21 96.7
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 11 353 1.48e-21 96.7
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 11 353 1.48e-21 96.7
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 11 353 1.48e-21 96.7
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 11 353 1.57e-21 97.4
MS.gene34735.t1 AT1G06630 29.282 362 222 13 24 370 20 362 1.64e-21 96.7
MS.gene34735.t1 AT3G52680 28.355 462 276 20 24 464 20 447 2.36e-21 96.7
MS.gene34735.t1 AT4G00315 26.915 457 294 18 25 461 2 438 1.08e-20 94.7
MS.gene34735.t1 AT5G18780 28.270 474 273 23 17 461 3 438 1.29e-20 94.4
MS.gene34735.t1 AT5G18780 28.270 474 273 23 17 461 3 438 1.29e-20 94.4
MS.gene34735.t1 AT5G44950 29.252 441 241 22 24 430 3 406 1.77e-20 94.0
MS.gene34735.t1 AT4G00160 28.540 459 271 18 24 460 15 438 2.22e-20 94.0
MS.gene34735.t1 AT3G58940 24.891 458 277 17 25 451 2 423 2.33e-20 94.4
MS.gene34735.t1 AT3G58940 24.891 458 277 17 25 451 2 423 2.33e-20 94.4
MS.gene34735.t1 AT2G26860 27.828 442 250 19 25 435 2 405 2.56e-20 93.2
MS.gene34735.t1 AT2G26860 27.828 442 250 19 25 435 2 405 2.56e-20 93.2
MS.gene34735.t1 AT4G14096 28.278 389 242 14 24 394 7 376 2.93e-20 93.6
MS.gene34735.t1 AT4G14096 28.278 389 242 14 24 394 7 376 2.93e-20 93.6
MS.gene34735.t1 AT1G55660 30.864 243 155 8 25 262 53 287 3.07e-20 92.4
MS.gene34735.t1 AT5G56810 27.754 472 279 19 11 461 1 431 4.53e-20 92.8
MS.gene34735.t1 AT4G14103 32.130 277 159 11 21 284 4 264 7.45e-20 91.7
MS.gene34735.t1 AT4G14103 32.130 277 159 11 21 284 4 264 7.45e-20 91.7
MS.gene34735.t1 AT4G14103 32.364 275 157 11 23 284 6 264 1.02e-19 91.7
MS.gene34735.t1 AT5G56400 25.847 472 283 19 18 464 26 455 1.17e-19 91.7
MS.gene34735.t1 AT4G09920 31.457 302 172 17 25 314 2 280 2.78e-19 89.0
MS.gene34735.t1 AT4G09920 31.457 302 172 17 25 314 2 280 2.78e-19 89.0
MS.gene34735.t1 AT5G22660 26.860 484 274 21 15 461 3 443 2.87e-19 90.5
MS.gene34735.t1 AT4G15060 30.132 302 162 12 9 283 10 289 3.17e-19 90.1
MS.gene34735.t1 AT1G13780 28.153 444 251 20 25 430 10 423 3.37e-19 90.1
MS.gene34735.t1 AT1G66310 27.083 480 274 23 12 461 6 439 3.99e-19 90.1
MS.gene34735.t1 AT5G56440 26.030 461 286 19 25 463 2 429 4.45e-19 89.7
MS.gene34735.t1 AT4G09920 31.229 301 178 16 25 312 2 286 5.10e-19 87.8
MS.gene34735.t1 AT4G09920 31.229 301 178 16 25 312 2 286 5.10e-19 87.8
MS.gene34735.t1 AT4G09920 31.229 301 178 16 25 312 2 286 5.10e-19 87.8
MS.gene34735.t1 AT1G22000 26.781 407 234 16 26 406 30 398 8.10e-19 89.4
MS.gene34735.t1 AT1G05080 27.434 452 279 18 24 457 12 432 1.36e-18 88.2
MS.gene34735.t1 AT1G51370 27.569 399 229 20 24 402 18 376 1.65e-18 87.8
MS.gene34735.t1 AT5G41840 25.874 429 250 18 25 399 14 428 1.95e-18 88.2
MS.gene34735.t1 AT4G15060 30.769 286 149 12 25 283 172 435 4.17e-18 87.4
MS.gene34735.t1 AT5G56380 27.837 467 281 21 25 464 2 439 6.47e-18 86.3
MS.gene34735.t1 AT5G56380 27.837 467 281 21 25 464 2 439 6.47e-18 86.3
MS.gene34735.t1 AT5G27750 25.826 484 284 19 25 464 5 457 7.16e-18 86.3
MS.gene34735.t1 AT3G59200 29.304 273 166 12 23 282 5 263 1.08e-17 84.7
MS.gene34735.t1 AT3G49480 25.527 427 263 17 24 425 11 407 1.09e-17 85.5
MS.gene34735.t1 AT3G49030 25.330 454 266 17 24 463 20 414 1.17e-17 85.1
MS.gene34735.t1 AT3G59200 29.304 273 166 12 23 282 5 263 2.26e-17 85.1
MS.gene34735.t1 AT3G59190 28.084 381 224 19 21 369 8 370 2.80e-17 84.7
MS.gene34735.t1 AT3G59190 28.084 381 224 19 21 369 8 370 2.90e-17 84.0
MS.gene34735.t1 AT1G66320 26.446 484 286 23 7 461 12 454 4.92e-17 83.6
MS.gene34735.t1 AT5G56560 25.053 471 267 15 24 464 4 418 6.13e-17 83.2
MS.gene34735.t1 AT5G18780 28.989 376 212 18 17 368 3 347 6.38e-17 82.8
MS.gene34735.t1 AT5G18780 28.989 376 212 18 17 368 3 347 6.38e-17 82.8
MS.gene34735.t1 AT5G56370 29.630 270 166 10 25 288 2 253 1.40e-16 80.9
MS.gene34735.t1 AT5G22700 28.125 448 258 22 14 431 33 446 1.43e-16 82.4
MS.gene34735.t1 AT3G58860 24.541 436 296 14 25 447 7 422 1.65e-16 82.0
MS.gene34735.t1 AT4G13965 29.245 424 243 22 23 429 8 391 1.81e-16 81.6
MS.gene34735.t1 AT3G49030 24.726 457 291 18 24 463 20 440 2.15e-16 81.6
MS.gene34735.t1 AT5G22700 28.345 441 252 22 22 431 2 409 2.19e-16 81.6
MS.gene34735.t1 AT5G22700 28.345 441 252 22 22 431 2 409 2.19e-16 81.6
MS.gene34735.t1 AT5G22700 28.345 441 252 22 22 431 2 409 2.19e-16 81.6
MS.gene34735.t1 AT5G22700 28.345 441 252 22 22 431 2 409 2.19e-16 81.6
MS.gene34735.t1 AT4G26350 25.431 464 285 17 25 464 2 428 2.69e-16 81.3
MS.gene34735.t1 AT2G42720 32.117 274 152 13 25 283 2 256 2.74e-16 81.3
MS.gene34735.t1 AT3G54910 26.667 390 242 13 86 464 17 373 3.09e-16 80.5
MS.gene34735.t1 AT3G54910 26.667 390 242 13 86 464 17 373 3.09e-16 80.5
MS.gene34735.t1 AT3G54910 26.667 390 242 13 86 464 17 373 3.09e-16 80.5
MS.gene34735.t1 AT3G26922 30.696 316 178 15 18 315 7 299 8.44e-16 78.6
MS.gene34735.t1 AT3G26922 30.696 316 178 15 18 315 7 299 8.44e-16 78.6
MS.gene34735.t1 AT3G52680 32.870 216 124 9 23 231 19 220 1.61e-15 78.2
MS.gene34735.t1 AT1G60410 26.047 430 267 17 22 431 7 405 2.35e-15 78.2
MS.gene34735.t1 AT5G50270 26.267 434 270 17 25 439 2 404 4.64e-15 77.4
MS.gene34735.t1 AT3G59170 30.363 303 160 11 23 284 5 297 5.35e-15 77.4
MS.gene34735.t1 AT3G58930 25.676 444 275 17 25 427 2 431 7.87e-15 77.0
MS.gene34735.t1 AT3G58930 25.676 444 275 17 25 427 2 431 7.87e-15 77.0
MS.gene34735.t1 AT3G58930 25.676 444 275 17 25 427 2 431 7.87e-15 77.0
MS.gene34735.t1 AT5G22700 26.728 434 241 20 14 431 33 405 1.26e-14 76.3
MS.gene34735.t1 AT4G10420 25.723 346 222 13 127 463 2 321 3.05e-14 73.9
MS.gene34735.t1 AT5G56700 26.862 376 230 17 64 425 2 346 3.14e-14 74.3
MS.gene34735.t1 AT5G56410 25.229 436 255 18 32 430 10 411 3.46e-14 75.1
MS.gene34735.t1 AT1G13780 28.190 337 190 14 25 328 10 327 3.66e-14 73.9
MS.gene34735.t1 AT1G60400 25.722 381 234 13 22 381 11 363 4.90e-14 73.9
MS.gene34735.t1 AT5G56390 25.602 457 288 14 25 463 2 424 5.06e-14 74.3
MS.gene34735.t1 AT5G53640 28.372 215 128 8 6 215 3 196 5.18e-14 71.6
MS.gene34735.t1 AT1G51370 27.701 361 205 19 24 368 18 338 5.45e-14 73.6
MS.gene34735.t1 AT5G41830 26.790 377 230 12 24 369 12 373 1.06e-13 73.6
MS.gene34735.t1 AT3G44810 30.204 245 149 8 27 258 9 244 1.76e-13 72.8
MS.gene34735.t1 AT4G00320 24.474 380 241 13 21 369 9 373 1.81e-13 72.8
MS.gene34735.t1 AT5G38590 30.808 198 125 6 91 283 27 217 2.29e-13 70.5
MS.gene34735.t1 AT3G51530 26.269 453 256 21 9 430 11 416 2.86e-13 72.0
MS.gene34735.t1 AT5G22660 31.716 268 140 12 15 262 3 247 3.62e-13 70.9
MS.gene34735.t1 AT5G44980 27.273 429 267 21 23 430 2 406 4.58e-13 71.2
MS.gene34735.t1 AT5G44980 27.273 429 267 21 23 430 2 406 4.58e-13 71.2
MS.gene34735.t1 AT5G38386 24.882 422 242 16 25 430 2 364 6.08e-13 70.9
MS.gene34735.t1 AT5G38386 24.882 422 242 16 25 430 2 364 6.08e-13 70.9
MS.gene34735.t1 AT3G59210 29.101 378 218 15 21 369 3 359 9.25e-13 70.5
MS.gene34735.t1 AT3G59210 29.101 378 218 15 21 369 3 359 9.25e-13 70.5
MS.gene34735.t1 AT3G59210 29.101 378 218 15 21 369 3 359 9.25e-13 70.5
MS.gene34735.t1 AT3G59210 29.101 378 218 15 21 369 3 359 9.25e-13 70.5
MS.gene34735.t1 AT3G59210 29.101 378 218 15 21 369 3 359 9.25e-13 70.5
MS.gene34735.t1 AT5G38396 25.227 440 273 17 25 428 2 421 9.63e-13 70.5
MS.gene34735.t1 AT3G54160 25.359 418 254 17 74 462 36 424 7.76e-12 67.4
MS.gene34735.t1 AT5G56810 29.126 309 183 14 11 304 1 288 1.08e-11 66.2
MS.gene34735.t1 AT3G26920 27.954 347 216 15 128 463 16 339 1.24e-11 66.2
MS.gene34735.t1 AT3G26920 27.954 347 216 15 128 463 16 339 1.24e-11 66.2
MS.gene34735.t1 AT3G49480 26.829 287 176 11 153 425 1 267 1.57e-11 65.9
MS.gene34735.t1 AT3G42770 25.743 404 261 13 27 416 1 379 1.58e-11 67.0
MS.gene34735.t1 AT5G50270 28.413 271 170 10 25 285 2 258 2.86e-11 64.7
MS.gene34735.t1 AT1G58310 27.682 289 170 12 23 284 6 282 4.29e-11 65.5
MS.gene34735.t1 AT5G27750 25.714 385 220 15 25 368 5 364 5.66e-11 64.3
MS.gene34735.t1 AT3G49040 27.211 294 183 12 23 304 15 289 7.75e-11 63.5

Find 93 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCTATATCCACTTTAA+AGG 0.185801 8.1:+44961169 MS.gene34735:CDS
CGGTGAGATCTTTGTAGAAT+TGG 0.284338 8.1:+44960300 MS.gene34735:CDS
ACGTACCAAAAGAGATTATT+AGG 0.292927 8.1:+44960836 MS.gene34735:intron
CCTCTTCTCGTCTGAGGATC+AGG 0.298567 8.1:+44959499 MS.gene34735:CDS
CTTGATGTAGTCTCCTCTTC+TGG 0.309388 8.1:+44960637 MS.gene34735:CDS
CACCACATCAATTTGGTCTT+AGG 0.331226 8.1:+44961107 MS.gene34735:CDS
AAGTGGGATGCAAGACAATT+AGG 0.332413 8.1:-44961148 None:intergenic
CTGAATCTTTGGCCAAGCTT+AGG 0.379532 8.1:+44960455 MS.gene34735:CDS
GGCAGAGAGAAGGATATTAA+TGG 0.390004 8.1:-44960395 None:intergenic
TACGAAGGACCCGCGACATT+CGG 0.394870 8.1:+44959366 MS.gene34735:CDS
AGCAAAGTCTTTGAAATGTT+CGG 0.401003 8.1:-44959318 None:intergenic
AGTAAATTCAAAACTCTTCA+AGG 0.409402 8.1:-44960488 None:intergenic
GGTGAGATCTTTGTAGAATT+GGG 0.418728 8.1:+44960301 MS.gene34735:CDS
ACTCTCCTCCAAGCGCTCTC+TGG 0.418872 8.1:+44960685 MS.gene34735:CDS
TTCGGCCTCGCCGTCGACGC+CGG 0.419368 8.1:-44959300 None:intergenic
TGAATCTTTGGCCAAGCTTA+GGG 0.420723 8.1:+44960456 MS.gene34735:CDS
CGAAGTTATCAAGTTGAGAT+TGG 0.421124 8.1:-44959409 None:intergenic
TGGGAAGGAAGGAAAGTATA+TGG 0.423492 8.1:-44959181 None:intergenic
GATACAGCACCACATCAATT+TGG 0.425006 8.1:+44961100 MS.gene34735:CDS
AGCCTCACTGATATCACTAT+TGG 0.428235 8.1:+44960568 MS.gene34735:CDS
TCGGCCTCGCCGTCGACGCC+GGG 0.429312 8.1:-44959299 None:intergenic
CTCATAGGTATCTTCATCTC+TGG 0.436906 8.1:+44959237 MS.gene34735:CDS
GGCCAAAGATTCAGTTGAAA+AGG 0.438596 8.1:-44960446 None:intergenic
CAATGAGTCTTGTTTCTCAT+AGG 0.442368 8.1:+44959222 MS.gene34735:CDS
AGAGGAGGTTAGTGCATGAT+AGG 0.446173 8.1:-44959544 None:intergenic
CGTGGATTCGCACTGCCGTT+GGG 0.447263 8.1:+44959450 MS.gene34735:CDS
ATTATAAGAGCTTCAAGTAT+AGG 0.447586 8.1:-44960977 None:intergenic
AGTTTCAAAGTTTCTAAGAC+TGG 0.448465 8.1:-44960421 None:intergenic
ATTTAACTCCAGAGAGCGCT+TGG 0.458373 8.1:-44960693 None:intergenic
TTGGCGATGCCACTTCTGTT+GGG 0.460446 8.1:+44960587 MS.gene34735:CDS
ATCCTCTATATCCTTTAAAG+TGG 0.461419 8.1:-44961180 None:intergenic
ATCCACTTTAAAGGATATAG+AGG 0.462211 8.1:+44961178 MS.gene34735:CDS
TCAAAACTCTTCAAGGAAGA+TGG 0.465651 8.1:-44960481 None:intergenic
GCACTAACCTCCTCTCCATC+AGG 0.467643 8.1:+44959552 MS.gene34735:CDS
ATATGGCACAAGAGAGGGTC+TGG 0.470779 8.1:-44959164 None:intergenic
CTTGGAGGAGAGTGAGTAAA+GGG 0.475202 8.1:-44960675 None:intergenic
TTCTACAATGAGTACTCTCC+CGG 0.484115 8.1:+44959281 MS.gene34735:CDS
ATTGGCGATGCCACTTCTGT+TGG 0.491458 8.1:+44960586 MS.gene34735:CDS
TGTAGAATTGGGACAATCAT+CGG 0.493103 8.1:+44960312 MS.gene34735:CDS
CCAGTAGAAGAAGAAAATGA+TGG 0.495931 8.1:+44959101 MS.gene34735:CDS
ATATCCTTTAAAGTGGATAT+AGG 0.498926 8.1:-44961173 None:intergenic
CATTGTAGAAATGAAAAGCT+TGG 0.503238 8.1:-44959268 None:intergenic
CAAAGTTTCTAAGACTGGAC+AGG 0.505834 8.1:-44960416 None:intergenic
TTAAAGGATATAGAGGATGT+TGG 0.507552 8.1:+44961185 MS.gene34735:CDS
TAGAGGATGTTGGCTTGAGA+TGG 0.521759 8.1:+44961195 MS.gene34735:CDS
ACGTGGATTCGCACTGCCGT+TGG 0.524367 8.1:+44959449 MS.gene34735:CDS
AGTTGTAATCTCTTCAATGA+TGG 0.525654 8.1:-44960346 None:intergenic
TAGTGATATCAGTGAGGCTA+AGG 0.528202 8.1:-44960564 None:intergenic
TACAGAAAAGCGTCGAAAGT+AGG 0.534200 8.1:-44960935 None:intergenic
CTCTTCTCGTCTGAGGATCA+GGG 0.539018 8.1:+44959500 MS.gene34735:CDS
TGCCGTTGGGCCGTACCTTG+AGG 0.545155 8.1:+44959463 MS.gene34735:CDS
CCTGATCCTCAGACGAGAAG+AGG 0.554039 8.1:-44959499 None:intergenic
ACGCATCTTCCGAATGTCGC+GGG 0.555891 8.1:-44959375 None:intergenic
TGTAATGCACACAGTCTCTA+CGG 0.564381 8.1:+44960280 MS.gene34735:intron
ATCCTCAAGGTACGGCCCAA+CGG 0.565741 8.1:-44959465 None:intergenic
TCTCGACCTCTTCTCGTCTG+AGG 0.568024 8.1:+44959493 MS.gene34735:CDS
AACAGATTCACTTCCAGAAG+AGG 0.569559 8.1:-44960650 None:intergenic
CTGAACGCTCTGTTGACACG+TGG 0.571418 8.1:+44959432 MS.gene34735:CDS
TAACTCCAGAGAGCGCTTGG+AGG 0.571531 8.1:-44960690 None:intergenic
GCTTGGAGGAGAGTGAGTAA+AGG 0.575040 8.1:-44960676 None:intergenic
TAAAGTGGATATAGGTCAAG+TGG 0.575798 8.1:-44961165 None:intergenic
GGAAGATGGAACCCTAAGCT+TGG 0.579963 8.1:-44960467 None:intergenic
GTGCAAGTTCCCAACAGAAG+TGG 0.580230 8.1:-44960596 None:intergenic
AGACTGGACAGGCAGAGAGA+AGG 0.581233 8.1:-44960405 None:intergenic
AAAGTATATGGCACAAGAGA+GGG 0.581524 8.1:-44959169 None:intergenic
GAGTACTCTCCCGGCGTCGA+CGG 0.586422 8.1:+44959290 MS.gene34735:CDS
CAGTAGAAGAAGAAAATGAT+GGG 0.596665 8.1:+44959102 MS.gene34735:CDS
AGATGAAGATCCTCAAGGTA+CGG 0.599815 8.1:-44959473 None:intergenic
GAAAGTATATGGCACAAGAG+AGG 0.607034 8.1:-44959170 None:intergenic
AAGAGATTACAACTAGACAT+TGG 0.609472 8.1:+44960355 MS.gene34735:CDS
CGGAAGATGCGTCTCTCTTG+CGG 0.610368 8.1:+44959386 MS.gene34735:CDS
GAAGAAGAAAATGATGGGCA+AGG 0.611735 8.1:+44959107 MS.gene34735:CDS
GAACTTAGTCATATTTAACT+CGG 0.618369 8.1:-44961360 None:intergenic
GGGCTTCAAACTCCCTCTCG+CGG 0.620327 8.1:+44959520 MS.gene34735:CDS
ACAACTAGACATTGGTAATG+TGG 0.620834 8.1:+44960363 MS.gene34735:CDS
AAGGTAACCTGATGGAGAGG+AGG 0.620939 8.1:-44959559 None:intergenic
AGGCTAAGGTACTTGAGACC+AGG 0.622331 8.1:-44960550 None:intergenic
CTCTCCCGGCGTCGACGGCG+AGG 0.630012 8.1:+44959295 MS.gene34735:CDS
GACGCATCTTCCGAATGTCG+CGG 0.638940 8.1:-44959376 None:intergenic
AAAGTGGATATAGGTCAAGT+GGG 0.643217 8.1:-44961164 None:intergenic
ACGGCTTTCTCTCTTTACGA+AGG 0.645259 8.1:+44959351 MS.gene34735:CDS
GTTTAGTTGTAATACAACAA+TGG 0.648312 8.1:+44960723 MS.gene34735:CDS
TGTTGGGAACTTGCACAACG+TGG 0.655593 8.1:+44960603 MS.gene34735:CDS
TGCATGATAGGACCGCGAGA+GGG 0.662917 8.1:-44959532 None:intergenic
GTCCTAAGACCAAATTGATG+TGG 0.669559 8.1:-44961109 None:intergenic
GTGCATGATAGGACCGCGAG+AGG 0.674731 8.1:-44959533 None:intergenic
TGTCTTGAGATAGACACACC+TGG 0.677521 8.1:+44960532 MS.gene34735:CDS
TCTTATAATTCAGAATGACA+AGG 0.677636 8.1:+44960991 MS.gene34735:CDS
GGTCGAGATGAAGATCCTCA+AGG 0.701781 8.1:-44959478 None:intergenic
TGGGAACTTGCACAACGTGG+AGG 0.706891 8.1:+44960606 MS.gene34735:CDS
CGCCAATAGTGATATCAGTG+AGG 0.714173 8.1:-44960570 None:intergenic
CGGCAGACAGTAGATCCCCG+TGG 0.745934 8.1:-44961340 None:intergenic
AAAATTTCGTATATGCCACG+GGG 0.751789 8.1:+44961325 MS.gene34735:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAGGAATATATAATCA+TGG - chr8.1:44960768-44960787 None:intergenic 15.0%
!!! AATGTTTTTTTAGAAAGTTT+AGG - chr8.1:44959880-44959899 None:intergenic 15.0%
!!! TTGTCATATCTTTTATTAAT+TGG - chr8.1:44960018-44960037 None:intergenic 15.0%
!! AATATGAAGGGAAAAAAAAA+AGG - chr8.1:44959581-44959600 None:intergenic 20.0%
!! ACTAAAATACTCAAATATGA+AGG - chr8.1:44959594-44959613 None:intergenic 20.0%
!! CTAAAATACTCAAATATGAA+GGG - chr8.1:44959593-44959612 None:intergenic 20.0%
!! GAAGACTACTAAATATATAA+AGG - chr8.1:44960783-44960802 None:intergenic 20.0%
!!! ACGAAATTTTTTTGAGAAAA+TGG - chr8.1:44961315-44961334 None:intergenic 20.0%
!!! TTTTTATTCTACTATTGTAC+TGG + chr8.1:44960127-44960146 MS.gene34735:intron 20.0%
! AAAAAAAAAAGGTAACCTGA+TGG - chr8.1:44959570-44959589 None:intergenic 25.0%
! AAAAAATTTCGTATATGCCA+CGG + chr8.1:44961323-44961342 MS.gene34735:CDS 25.0%
! AGTAAATTCAAAACTCTTCA+AGG - chr8.1:44960491-44960510 None:intergenic 25.0%
! ATTATAAGAGCTTCAAGTAT+AGG - chr8.1:44960980-44960999 None:intergenic 25.0%
! GTTTAGTTGTAATACAACAA+TGG + chr8.1:44960723-44960742 MS.gene34735:CDS 25.0%
! TCTTATAATTCAGAATGACA+AGG + chr8.1:44960991-44961010 MS.gene34735:CDS 25.0%
! TGTTATATGAAAATAACTCG+AGG + chr8.1:44959911-44959930 MS.gene34735:intron 25.0%
!!! ATATCCTTTAAAGTGGATAT+AGG - chr8.1:44961176-44961195 None:intergenic 25.0%
!!! GTGTTGTTTGTTTGATTATT+TGG + chr8.1:44961053-44961072 MS.gene34735:intron 25.0%
!!! TTTTTCGAAAATGCACTTTT+CGG + chr8.1:44960877-44960896 MS.gene34735:CDS 25.0%
AAAAATTTCGTATATGCCAC+GGG + chr8.1:44961324-44961343 MS.gene34735:CDS 30.0%
AAAATAACTCGAGGAAAACT+AGG + chr8.1:44959920-44959939 MS.gene34735:intron 30.0%
AAGAGATTACAACTAGACAT+TGG + chr8.1:44960355-44960374 MS.gene34735:CDS 30.0%
ACGTACCAAAAGAGATTATT+AGG + chr8.1:44960836-44960855 MS.gene34735:intron 30.0%
AGTTGTAATCTCTTCAATGA+TGG - chr8.1:44960349-44960368 None:intergenic 30.0%
CAGTAGAAGAAGAAAATGAT+GGG + chr8.1:44959102-44959121 MS.gene34735:CDS 30.0%
CATTGTAGAAATGAAAAGCT+TGG - chr8.1:44959271-44959290 None:intergenic 30.0%
TACAGAGAGTTAGGTATAAT+GGG + chr8.1:44959638-44959657 MS.gene34735:intron 30.0%
TTAAAGGATATAGAGGATGT+TGG + chr8.1:44961185-44961204 MS.gene34735:CDS 30.0%
TTAGAAAGTTTAGGTGAGTT+GGG - chr8.1:44959871-44959890 None:intergenic 30.0%
TTGACCTATATCCACTTTAA+AGG + chr8.1:44961169-44961188 MS.gene34735:CDS 30.0%
TTTAGAAAGTTTAGGTGAGT+TGG - chr8.1:44959872-44959891 None:intergenic 30.0%
! AGACAATTAGGAACACTTTT+CGG - chr8.1:44961139-44961158 None:intergenic 30.0%
! ATCCACTTTAAAGGATATAG+AGG + chr8.1:44961178-44961197 MS.gene34735:CDS 30.0%
! ATCCTCTATATCCTTTAAAG+TGG - chr8.1:44961183-44961202 None:intergenic 30.0%
! GACTACCTAATAATCTCTTT+TGG - chr8.1:44960844-44960863 None:intergenic 30.0%
! GCTAGTTATGTTTTGCATTA+TGG + chr8.1:44961223-44961242 MS.gene34735:CDS 30.0%
! TTCCTTTTCAACTGAATCTT+TGG + chr8.1:44960444-44960463 MS.gene34735:CDS 30.0%
! TTGAAGAAAATGCGTTTTTC+TGG + chr8.1:44961253-44961272 MS.gene34735:CDS 30.0%
! TTTATTTGCTACAGAGAGTT+AGG + chr8.1:44959629-44959648 MS.gene34735:intron 30.0%
!! AGATATGACAAAACTTGCTA+AGG + chr8.1:44960027-44960046 MS.gene34735:intron 30.0%
!! AGCAAAGTCTTTGAAATGTT+CGG - chr8.1:44959321-44959340 None:intergenic 30.0%
!! AGTTTCAAAGTTTCTAAGAC+TGG - chr8.1:44960424-44960443 None:intergenic 30.0%
!! ATTGAGTTTAACTTGAGCTT+TGG + chr8.1:44961021-44961040 MS.gene34735:intron 30.0%
AAAATTTCGTATATGCCACG+GGG + chr8.1:44961325-44961344 MS.gene34735:CDS 35.0%
AAAGTATATGGCACAAGAGA+GGG - chr8.1:44959172-44959191 None:intergenic 35.0%
AAAGTGGATATAGGTCAAGT+GGG - chr8.1:44961167-44961186 None:intergenic 35.0%
AGAGATTCCTGCATCAATAA+TGG - chr8.1:44959778-44959797 None:intergenic 35.0%
AGTCTGTAAGTACGTTTGTT+GGG + chr8.1:44959803-44959822 MS.gene34735:intron 35.0%
ATCACCAATTACTACTCCAT+CGG - chr8.1:44959948-44959967 None:intergenic 35.0%
CCAGTAGAAGAAGAAAATGA+TGG + chr8.1:44959101-44959120 MS.gene34735:CDS 35.0%
CTACAGAGAGTTAGGTATAA+TGG + chr8.1:44959637-44959656 MS.gene34735:intron 35.0%
GAGATTCCTGCATCAATAAT+GGG - chr8.1:44959777-44959796 None:intergenic 35.0%
GGTGAGATCTTTGTAGAATT+GGG + chr8.1:44960301-44960320 MS.gene34735:CDS 35.0%
TAAAGTGGATATAGGTCAAG+TGG - chr8.1:44961168-44961187 None:intergenic 35.0%
TAGTCTGTAAGTACGTTTGT+TGG + chr8.1:44959802-44959821 MS.gene34735:intron 35.0%
TATTGATGCAGGAATCTCTT+TGG + chr8.1:44959779-44959798 MS.gene34735:intron 35.0%
TCAAAACTCTTCAAGGAAGA+TGG - chr8.1:44960484-44960503 None:intergenic 35.0%
TGTAGAATTGGGACAATCAT+CGG + chr8.1:44960312-44960331 MS.gene34735:CDS 35.0%
TTAGACATTCACTTGCAGAA+TGG + chr8.1:44960103-44960122 MS.gene34735:intron 35.0%
! CCATCATTTTCTTCTTCTAC+TGG - chr8.1:44959104-44959123 None:intergenic 35.0%
!! ACAACTAGACATTGGTAATG+TGG + chr8.1:44960363-44960382 MS.gene34735:CDS 35.0%
!! CAATGAGTCTTGTTTCTCAT+AGG + chr8.1:44959222-44959241 MS.gene34735:CDS 35.0%
!! CGAAGTTATCAAGTTGAGAT+TGG - chr8.1:44959412-44959431 None:intergenic 35.0%
!! GTACACACAGATGTTTTTGT+GGG - chr8.1:44959203-44959222 None:intergenic 35.0%
!! TGTACACACAGATGTTTTTG+TGG - chr8.1:44959204-44959223 None:intergenic 35.0%
!! TTTAACTTGAGCTTTGGTGT+GGG + chr8.1:44961027-44961046 MS.gene34735:intron 35.0%
!!! GACTTTGCTATTTTCGTCAA+CGG + chr8.1:44959332-44959351 MS.gene34735:CDS 35.0%
!!! GCGTTTTTCTGGTTTTTTGT+TGG + chr8.1:44961264-44961283 MS.gene34735:CDS 35.0%
AAAAAGGTAACCTGATGGAG+AGG - chr8.1:44959565-44959584 None:intergenic 40.0%
AACAGATTCACTTCCAGAAG+AGG - chr8.1:44960653-44960672 None:intergenic 40.0%
AAGTGGGATGCAAGACAATT+AGG - chr8.1:44961151-44961170 None:intergenic 40.0%
AGATGAAGATCCTCAAGGTA+CGG - chr8.1:44959476-44959495 None:intergenic 40.0%
AGCCTCACTGATATCACTAT+TGG + chr8.1:44960568-44960587 MS.gene34735:CDS 40.0%
CGGTGAGATCTTTGTAGAAT+TGG + chr8.1:44960300-44960319 MS.gene34735:CDS 40.0%
CTCATAGGTATCTTCATCTC+TGG + chr8.1:44959237-44959256 MS.gene34735:CDS 40.0%
GATACAGCACCACATCAATT+TGG + chr8.1:44961100-44961119 MS.gene34735:CDS 40.0%
GGCAGAGAGAAGGATATTAA+TGG - chr8.1:44960398-44960417 None:intergenic 40.0%
GGCCAAAGATTCAGTTGAAA+AGG - chr8.1:44960449-44960468 None:intergenic 40.0%
GGTACGTACAAAACAACAAG+TGG - chr8.1:44960823-44960842 None:intergenic 40.0%
GTCCTAAGACCAAATTGATG+TGG - chr8.1:44961112-44961131 None:intergenic 40.0%
TAGTGATATCAGTGAGGCTA+AGG - chr8.1:44960567-44960586 None:intergenic 40.0%
TCAACTCCCATTATTGATGC+AGG + chr8.1:44959768-44959787 MS.gene34735:intron 40.0%
TGAATCTTTGGCCAAGCTTA+GGG + chr8.1:44960456-44960475 MS.gene34735:CDS 40.0%
TGTAATGCACACAGTCTCTA+CGG + chr8.1:44960280-44960299 MS.gene34735:intron 40.0%
TTCTACAATGAGTACTCTCC+CGG + chr8.1:44959281-44959300 MS.gene34735:CDS 40.0%
! ACAATGAAAGTTGACTCCGT+TGG + chr8.1:44959715-44959734 MS.gene34735:intron 40.0%
! CACCACATCAATTTGGTCTT+AGG + chr8.1:44961107-44961126 MS.gene34735:CDS 40.0%
! GAAAGTATATGGCACAAGAG+AGG - chr8.1:44959173-44959192 None:intergenic 40.0%
! TGGGAAGGAAGGAAAGTATA+TGG - chr8.1:44959184-44959203 None:intergenic 40.0%
!! ACACAGATGTTTTTGTGGGA+AGG - chr8.1:44959199-44959218 None:intergenic 40.0%
!! AGATGTTTTTGTGGGAAGGA+AGG - chr8.1:44959195-44959214 None:intergenic 40.0%
!! CAAAGTTTCTAAGACTGGAC+AGG - chr8.1:44960419-44960438 None:intergenic 40.0%
!! GAAGAAGAAAATGATGGGCA+AGG + chr8.1:44959107-44959126 MS.gene34735:CDS 40.0%
!! GTTTAACTTGAGCTTTGGTG+TGG + chr8.1:44961026-44961045 MS.gene34735:intron 40.0%
!! TACAGAAAAGCGTCGAAAGT+AGG - chr8.1:44960938-44960957 None:intergenic 40.0%
ACGGCTTTCTCTCTTTACGA+AGG + chr8.1:44959351-44959370 MS.gene34735:CDS 45.0%
AGAGGAGGTTAGTGCATGAT+AGG - chr8.1:44959547-44959566 None:intergenic 45.0%
CGCCAATAGTGATATCAGTG+AGG - chr8.1:44960573-44960592 None:intergenic 45.0%
CTGAATCTTTGGCCAAGCTT+AGG + chr8.1:44960455-44960474 MS.gene34735:CDS 45.0%
CTTGATGTAGTCTCCTCTTC+TGG + chr8.1:44960637-44960656 MS.gene34735:CDS 45.0%
CTTGGAGGAGAGTGAGTAAA+GGG - chr8.1:44960678-44960697 None:intergenic 45.0%
GGATCCGATGGAGTAGTAAT+TGG + chr8.1:44959941-44959960 MS.gene34735:intron 45.0%
GGGTGAGTAAACTCTACCAA+CGG - chr8.1:44959734-44959753 None:intergenic 45.0%
TGTCTTGAGATAGACACACC+TGG + chr8.1:44960532-44960551 MS.gene34735:CDS 45.0%
! AGTTGTACCTTGTTTCCTGC+AGG + chr8.1:44961078-44961097 MS.gene34735:intron 45.0%
!! ATTTAACTCCAGAGAGCGCT+TGG - chr8.1:44960696-44960715 None:intergenic 45.0%
!! TAGAGGATGTTGGCTTGAGA+TGG + chr8.1:44961195-44961214 MS.gene34735:CDS 45.0%
AAGGTAACCTGATGGAGAGG+AGG - chr8.1:44959562-44959581 None:intergenic 50.0%
AGTTGATCTCACCACCTTGC+GGG - chr8.1:44959754-44959773 None:intergenic 50.0%
ATATGGCACAAGAGAGGGTC+TGG - chr8.1:44959167-44959186 None:intergenic 50.0%
CGAGGAAAACTAGGATCCGA+TGG + chr8.1:44959929-44959948 MS.gene34735:intron 50.0%
CTCTTCTCGTCTGAGGATCA+GGG + chr8.1:44959500-44959519 MS.gene34735:CDS 50.0%
GCTGTATCCTGCAGGAAACA+AGG - chr8.1:44961088-44961107 None:intergenic 50.0%
GCTTGGAGGAGAGTGAGTAA+AGG - chr8.1:44960679-44960698 None:intergenic 50.0%
GGAAGATGGAACCCTAAGCT+TGG - chr8.1:44960470-44960489 None:intergenic 50.0%
GGTCGAGATGAAGATCCTCA+AGG - chr8.1:44959481-44959500 None:intergenic 50.0%
GTAGAGTTTACTCACCCGCA+AGG + chr8.1:44959737-44959756 MS.gene34735:intron 50.0%
GTGCAAGTTCCCAACAGAAG+TGG - chr8.1:44960599-44960618 None:intergenic 50.0%
TGTTGGGAACTTGCACAACG+TGG + chr8.1:44960603-44960622 MS.gene34735:CDS 50.0%
! AGGCTAAGGTACTTGAGACC+AGG - chr8.1:44960553-44960572 None:intergenic 50.0%
! ATTGGCGATGCCACTTCTGT+TGG + chr8.1:44960586-44960605 MS.gene34735:CDS 50.0%
! GAGTTGATCTCACCACCTTG+CGG - chr8.1:44959755-44959774 None:intergenic 50.0%
! TTGGCGATGCCACTTCTGTT+GGG + chr8.1:44960587-44960606 MS.gene34735:CDS 50.0%
ACGCATCTTCCGAATGTCGC+GGG - chr8.1:44959378-44959397 None:intergenic 55.0%
AGACTGGACAGGCAGAGAGA+AGG - chr8.1:44960408-44960427 None:intergenic 55.0%
ATCCTCAAGGTACGGCCCAA+CGG - chr8.1:44959468-44959487 None:intergenic 55.0%
CCTCTTCTCGTCTGAGGATC+AGG + chr8.1:44959499-44959518 MS.gene34735:CDS 55.0%
CCTGATCCTCAGACGAGAAG+AGG - chr8.1:44959502-44959521 None:intergenic 55.0%
CGGAAGATGCGTCTCTCTTG+CGG + chr8.1:44959386-44959405 MS.gene34735:CDS 55.0%
CTGAACGCTCTGTTGACACG+TGG + chr8.1:44959432-44959451 MS.gene34735:CDS 55.0%
GACGCATCTTCCGAATGTCG+CGG - chr8.1:44959379-44959398 None:intergenic 55.0%
GAGTTTACTCACCCGCAAGG+TGG + chr8.1:44959740-44959759 MS.gene34735:intron 55.0%
GCACTAACCTCCTCTCCATC+AGG + chr8.1:44959552-44959571 MS.gene34735:CDS 55.0%
TACGAAGGACCCGCGACATT+CGG + chr8.1:44959366-44959385 MS.gene34735:CDS 55.0%
TCTCGACCTCTTCTCGTCTG+AGG + chr8.1:44959493-44959512 MS.gene34735:CDS 55.0%
TGCATGATAGGACCGCGAGA+GGG - chr8.1:44959535-44959554 None:intergenic 55.0%
TGGGAACTTGCACAACGTGG+AGG + chr8.1:44960606-44960625 MS.gene34735:CDS 55.0%
!! GATGTGGTGCTGTATCCTGC+AGG - chr8.1:44961096-44961115 None:intergenic 55.0%
!! TAACTCCAGAGAGCGCTTGG+AGG - chr8.1:44960693-44960712 None:intergenic 55.0%
ACGTGGATTCGCACTGCCGT+TGG + chr8.1:44959449-44959468 MS.gene34735:CDS 60.0%
ACTCTCCTCCAAGCGCTCTC+TGG + chr8.1:44960685-44960704 MS.gene34735:CDS 60.0%
AGAGACCTGCCTTGTCGCTC+GGG + chr8.1:44959834-44959853 MS.gene34735:intron 60.0%
CGTGGATTCGCACTGCCGTT+GGG + chr8.1:44959450-44959469 MS.gene34735:CDS 60.0%
GAGAGACCTGCCTTGTCGCT+CGG + chr8.1:44959833-44959852 MS.gene34735:intron 60.0%
GGGCTTCAAACTCCCTCTCG+CGG + chr8.1:44959520-44959539 MS.gene34735:CDS 60.0%
GTGCATGATAGGACCGCGAG+AGG - chr8.1:44959536-44959555 None:intergenic 60.0%
AAGCTCCCGAGCGACAAGGC+AGG - chr8.1:44959842-44959861 None:intergenic 65.0%
CCAGAAGCTCCCGAGCGACA+AGG - chr8.1:44959846-44959865 None:intergenic 65.0%
CCTTGTCGCTCGGGAGCTTC+TGG + chr8.1:44959843-44959862 MS.gene34735:intron 65.0%
CGGCAGACAGTAGATCCCCG+TGG - chr8.1:44961343-44961362 None:intergenic 65.0%
TGCCGTTGGGCCGTACCTTG+AGG + chr8.1:44959463-44959482 MS.gene34735:CDS 65.0%
! GAGTACTCTCCCGGCGTCGA+CGG + chr8.1:44959290-44959309 MS.gene34735:CDS 65.0%
TTCGGCCTCGCCGTCGACGC+CGG - chr8.1:44959303-44959322 None:intergenic 75.0%
! TCGGCCTCGCCGTCGACGCC+GGG - chr8.1:44959302-44959321 None:intergenic 80.0%
!!! CTCTCCCGGCGTCGACGGCG+AGG + chr8.1:44959295-44959314 MS.gene34735:CDS 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 44959074 44961378 44959074 ID=MS.gene34735
chr8.1 mRNA 44959074 44961378 44959074 ID=MS.gene34735.t1;Parent=MS.gene34735
chr8.1 exon 44959074 44959573 44959074 ID=MS.gene34735.t1.exon1;Parent=MS.gene34735.t1
chr8.1 CDS 44959074 44959573 44959074 ID=cds.MS.gene34735.t1;Parent=MS.gene34735.t1
chr8.1 exon 44960294 44960744 44960294 ID=MS.gene34735.t1.exon2;Parent=MS.gene34735.t1
chr8.1 CDS 44960294 44960744 44960294 ID=cds.MS.gene34735.t1;Parent=MS.gene34735.t1
chr8.1 exon 44960848 44961012 44960848 ID=MS.gene34735.t1.exon3;Parent=MS.gene34735.t1
chr8.1 CDS 44960848 44961012 44960848 ID=cds.MS.gene34735.t1;Parent=MS.gene34735.t1
chr8.1 exon 44961100 44961378 44961100 ID=MS.gene34735.t1.exon4;Parent=MS.gene34735.t1
chr8.1 CDS 44961100 44961378 44961100 ID=cds.MS.gene34735.t1;Parent=MS.gene34735.t1
Gene Sequence

>MS.gene34735

ATGGAGGAAAGTTCAAAGAGAAGAAAACCAGTAGAAGAAGAAAATGATGGGCAAGGCAGTAACAGTAACAAAGACAGATTAAGCAGTCTGCCAGACCCTCTCTTGTGCCATATACTTTCCTTCCTTCCCACAAAAACATCTGTGTGTACAATGAGTCTTGTTTCTCATAGGTATCTTCATCTCTGGAAATATCTCCAAGCTTTTCATTTCTACAATGAGTACTCTCCCGGCGTCGACGGCGAGGCCGAACATTTCAAAGACTTTGCTATTTTCGTCAACGGCTTTCTCTCTTTACGAAGGACCCGCGACATTCGGAAGATGCGTCTCTCTTGCGGCCAATCTCAACTTGATAACTTCGCTGAACGCTCTGTTGACACGTGGATTCGCACTGCCGTTGGGCCGTACCTTGAGGATCTTCATCTCGACCTCTTCTCGTCTGAGGATCAGGGCTTCAAACTCCCTCTCGCGGTCCTATCATGCACTAACCTCCTCTCCATCAGGTTACCTTTTTTTTTTCCCTTCATATTTGAGTATTTTAGTCTCTCATTTTCAATGTTTATTTGCTACAGAGAGTTAGGTATAATGGGATAACAAATTATTAAAATTATTTTATGAAAAAGTAACAAGATTTATTGATTTTAACAATGAAAGTTGACTCCGTTGGTAGAGTTTACTCACCCGCAAGGTGGTGAGATCAACTCCCATTATTGATGCAGGAATCTCTTTGGTAGTCTGTAAGTACGTTTGTTGGGTCTCACTGAGAGACCTGCCTTGTCGCTCGGGAGCTTCTGGAGCCCAACTCACCTAAACTTTCTAAAAAAACATTTATTGATTGTTTGTTATATGAAAATAACTCGAGGAAAACTAGGATCCGATGGAGTAGTAATTGGTGATTTTATTATTATTATGCTAATTAAGCAAAGACATTTTCAATTAACAAACCAATTAATAAAAGATATGACAAAACTTGCTAAGGAAAAGACACTATGTCATGTTTTGTAGCATTGTTACATACATTCAACATTATTCTTAGACATTCACTTGCAGAATGGCTTTTTATTCTACTATTGTACTGGTATTTATTTACAAAAATTACAGTCTTTTTTAGAGCTTCAAAGATATTTCTTTCAGTCATTTCTTTATTTATTATTTGCACACTTGTTCTTGTTAAATGTGACATGATAAATGATGATAACATAAGATTTGTGTAATGCACACAGTCTCTACGGTGAGATCTTTGTAGAATTGGGACAATCATCGGCTGTTTGTTTACCATCATTGAAGAGATTACAACTAGACATTGGTAATGTGGATGTGAATGCCATTAATATCCTTCTCTCTGCCTGTCCAGTCTTAGAAACTTTGAAACTTTCCTTTTCAACTGAATCTTTGGCCAAGCTTAGGGTTCCATCTTCCTTGAAGAGTTTTGAATTTACTGTAGAGAATGAAATTGAAGTTTGTCTTGAGATAGACACACCTGGTCTCAAGTACCTTAGCCTCACTGATATCACTATTGGCGATGCCACTTCTGTTGGGAACTTGCACAACGTGGAGGAAGCATATCTTGATGTAGTCTCCTCTTCTGGAAGTGAATCTGTTGACCCTTTACTCACTCTCCTCCAAGCGCTCTCTGGAGTTAAATGTCTAGTGTTTAGTTGTAATACAACAATGGTGAGTGCAATTTTCGTTATCCATGATTATATATTCCTTTATATATTTAGTAGTCTTCTGCTAATTCTTGTATCTCCACTTGTTGTTTTGTACGTACCAAAAGAGATTATTAGGTAGTCAACGTATTATAGATTTTTCGAAAATGCACTTTTCGGAATTTCGCTGTTTACTACATCTAGAGCTCATTCTTCCTACTTTCGACGCTTTTCTGTACGTCGTGCTTCAGAAATGTCCTATACTTGAAGCTCTTATAATTCAGAATGACAAGGTTCGTGAATTGAGTTTAACTTGAGCTTTGGTGTGGGTGTGTGTTGTTTGTTTGATTATTTGGTGAGTTGTACCTTGTTTCCTGCAGGATACAGCACCACATCAATTTGGTCTTAGGACAAAGCCGAAAAGTGTTCCTAATTGTCTTGCATCCCACTTGACCTATATCCACTTTAAAGGATATAGAGGATGTTGGCTTGAGATGGACTTTGCTAGTTATGTTTTGCATTATGGACTTGTTTTGAAGAAAATGCGTTTTTCTGGTTTTTTGTTGGATGAAAGAAAGAAGTCGACAAAGTACCATTTTCTCAAAAAAATTTCGTATATGCCACGGGGATCTACTGTCTGCCGAGTTAAATATGACTAA

Protein sequence

>MS.gene34735.t1

MEESSKRRKPVEEENDGQGSNSNKDRLSSLPDPLLCHILSFLPTKTSVCTMSLVSHRYLHLWKYLQAFHFYNEYSPGVDGEAEHFKDFAIFVNGFLSLRRTRDIRKMRLSCGQSQLDNFAERSVDTWIRTAVGPYLEDLHLDLFSSEDQGFKLPLAVLSCTNLLSISLYGEIFVELGQSSAVCLPSLKRLQLDIGNVDVNAINILLSACPVLETLKLSFSTESLAKLRVPSSLKSFEFTVENEIEVCLEIDTPGLKYLSLTDITIGDATSVGNLHNVEEAYLDVVSSSGSESVDPLLTLLQALSGVKCLVFSCNTTMRLLGSQRIIDFSKMHFSEFRCLLHLELILPTFDAFLYVVLQKCPILEALIIQNDKDTAPHQFGLRTKPKSVPNCLASHLTYIHFKGYRGCWLEMDFASYVLHYGLVLKKMRFSGFLLDERKKSTKYHFLKKISYMPRGSTVCRVKYD