Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34733.t1 | XP_004509921.2 | 56.9 | 360 | 138 | 8 | 7 | 359 | 15 | 364 | 3.20E-98 | 368.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34733.t1 | Q94B46 | 30.4 | 276 | 147 | 10 | 21 | 272 | 8 | 262 | 7.5e-19 | 96.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34733.t1 | A0A392M1I8 | 53.5 | 370 | 151 | 3 | 7 | 359 | 4 | 369 | 9.5e-100 | 373.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34733.t1 | MTR_4g050250 | 50.256 | 390 | 156 | 7 | 1 | 359 | 1 | 383 | 1.00e-113 | 337 |
MS.gene34733.t1 | MTR_8g058965 | 51.482 | 371 | 149 | 6 | 12 | 359 | 4 | 366 | 2.30e-112 | 335 |
MS.gene34733.t1 | MTR_8g469020 | 51.923 | 364 | 141 | 9 | 21 | 359 | 7 | 361 | 4.58e-108 | 324 |
MS.gene34733.t1 | MTR_8g070950 | 53.151 | 365 | 144 | 11 | 1 | 359 | 1 | 344 | 5.32e-103 | 310 |
MS.gene34733.t1 | MTR_8g062010 | 49.713 | 348 | 150 | 7 | 21 | 359 | 9 | 340 | 7.37e-97 | 295 |
MS.gene34733.t1 | MTR_8g062080 | 48.563 | 348 | 155 | 8 | 21 | 359 | 23 | 355 | 3.61e-94 | 288 |
MS.gene34733.t1 | MTR_8g467790 | 48.997 | 349 | 131 | 9 | 21 | 359 | 148 | 459 | 1.31e-87 | 273 |
MS.gene34733.t1 | MTR_8g062310 | 47.059 | 340 | 153 | 7 | 21 | 359 | 25 | 338 | 2.72e-86 | 267 |
MS.gene34733.t1 | MTR_8g062300 | 42.506 | 407 | 166 | 15 | 1 | 359 | 1 | 387 | 1.69e-79 | 251 |
MS.gene34733.t1 | MTR_2g083840 | 42.480 | 379 | 183 | 11 | 1 | 359 | 1 | 364 | 1.05e-72 | 233 |
MS.gene34733.t1 | MTR_8g468810 | 40.731 | 383 | 191 | 13 | 1 | 359 | 1 | 371 | 2.77e-70 | 224 |
MS.gene34733.t1 | MTR_8g468810 | 40.731 | 383 | 191 | 13 | 1 | 359 | 1 | 371 | 2.42e-69 | 224 |
MS.gene34733.t1 | MTR_8g062270 | 41.880 | 351 | 178 | 9 | 21 | 354 | 16 | 357 | 2.23e-67 | 219 |
MS.gene34733.t1 | MTR_8g468810 | 43.750 | 304 | 143 | 10 | 1 | 285 | 1 | 295 | 8.41e-63 | 203 |
MS.gene34733.t1 | MTR_8g445780 | 42.373 | 354 | 172 | 13 | 21 | 359 | 13 | 349 | 8.71e-63 | 206 |
MS.gene34733.t1 | MTR_8g468810 | 43.750 | 304 | 143 | 10 | 1 | 285 | 1 | 295 | 1.57e-62 | 203 |
MS.gene34733.t1 | MTR_8g468810 | 43.750 | 304 | 143 | 10 | 1 | 285 | 1 | 295 | 2.02e-62 | 203 |
MS.gene34733.t1 | MTR_8g058970 | 39.175 | 388 | 193 | 13 | 7 | 359 | 6 | 385 | 9.97e-61 | 202 |
MS.gene34733.t1 | MTR_5g092960 | 39.142 | 373 | 197 | 8 | 9 | 359 | 7 | 371 | 1.91e-59 | 197 |
MS.gene34733.t1 | MTR_5g092960 | 39.142 | 373 | 197 | 8 | 9 | 359 | 7 | 371 | 6.44e-59 | 197 |
MS.gene34733.t1 | MTR_4g032730 | 37.912 | 364 | 202 | 11 | 11 | 359 | 2 | 356 | 1.62e-54 | 186 |
MS.gene34733.t1 | MTR_8g467800 | 39.674 | 368 | 188 | 11 | 10 | 359 | 8 | 359 | 4.69e-54 | 184 |
MS.gene34733.t1 | MTR_8g468840 | 39.045 | 356 | 194 | 9 | 19 | 359 | 12 | 359 | 8.87e-52 | 178 |
MS.gene34733.t1 | MTR_8g014260 | 37.731 | 379 | 200 | 15 | 1 | 359 | 1 | 363 | 8.96e-52 | 178 |
MS.gene34733.t1 | MTR_8g468760 | 39.776 | 357 | 156 | 13 | 12 | 351 | 2 | 316 | 4.33e-51 | 176 |
MS.gene34733.t1 | MTR_8g014160 | 42.435 | 271 | 130 | 9 | 21 | 273 | 41 | 303 | 1.33e-47 | 167 |
MS.gene34733.t1 | MTR_8g467800 | 41.275 | 298 | 145 | 10 | 10 | 289 | 8 | 293 | 5.29e-44 | 155 |
MS.gene34733.t1 | MTR_5g021550 | 50.625 | 160 | 71 | 5 | 7 | 164 | 9 | 162 | 1.07e-38 | 135 |
MS.gene34733.t1 | MTR_8g077460 | 40.724 | 221 | 121 | 8 | 21 | 234 | 10 | 227 | 5.53e-31 | 121 |
MS.gene34733.t1 | MTR_8g014290 | 44.079 | 152 | 77 | 4 | 21 | 165 | 10 | 160 | 1.08e-29 | 112 |
MS.gene34733.t1 | MTR_4g024720 | 39.011 | 182 | 87 | 5 | 1 | 164 | 1 | 176 | 1.29e-26 | 105 |
MS.gene34733.t1 | MTR_2g086020 | 45.270 | 148 | 65 | 3 | 47 | 189 | 1 | 137 | 2.80e-25 | 104 |
MS.gene34733.t1 | MTR_7g115270 | 33.790 | 219 | 118 | 8 | 13 | 218 | 4 | 208 | 2.50e-21 | 94.7 |
MS.gene34733.t1 | MTR_7g032380 | 34.314 | 204 | 107 | 10 | 14 | 208 | 4 | 189 | 5.57e-20 | 90.1 |
MS.gene34733.t1 | MTR_7g056447 | 35.122 | 205 | 112 | 7 | 20 | 220 | 8 | 195 | 1.79e-19 | 87.8 |
MS.gene34733.t1 | MTR_1g041245 | 35.859 | 198 | 98 | 9 | 21 | 208 | 11 | 189 | 2.21e-19 | 89.0 |
MS.gene34733.t1 | MTR_3g107120 | 31.224 | 237 | 140 | 10 | 21 | 242 | 9 | 237 | 2.05e-18 | 86.3 |
MS.gene34733.t1 | MTR_4g024710 | 35.321 | 218 | 103 | 8 | 165 | 359 | 58 | 260 | 2.48e-18 | 85.5 |
MS.gene34733.t1 | MTR_5g008950 | 31.050 | 219 | 113 | 9 | 23 | 230 | 1 | 192 | 6.24e-18 | 84.7 |
MS.gene34733.t1 | MTR_8g085430 | 32.353 | 204 | 104 | 9 | 21 | 208 | 11 | 196 | 6.35e-18 | 84.0 |
MS.gene34733.t1 | MTR_5g084070 | 27.957 | 372 | 213 | 18 | 1 | 355 | 1 | 334 | 1.20e-17 | 84.0 |
MS.gene34733.t1 | MTR_5g073420 | 32.273 | 220 | 133 | 10 | 11 | 225 | 2 | 210 | 1.32e-17 | 83.6 |
MS.gene34733.t1 | MTR_3g107160 | 31.222 | 221 | 135 | 9 | 21 | 235 | 10 | 219 | 4.74e-17 | 82.0 |
MS.gene34733.t1 | MTR_5g008920 | 32.632 | 190 | 108 | 8 | 23 | 208 | 14 | 187 | 5.99e-17 | 81.6 |
MS.gene34733.t1 | MTR_3g108150 | 33.503 | 197 | 109 | 7 | 21 | 213 | 13 | 191 | 6.38e-17 | 81.6 |
MS.gene34733.t1 | MTR_5g061680 | 32.018 | 228 | 127 | 12 | 11 | 225 | 2 | 214 | 8.63e-17 | 80.5 |
MS.gene34733.t1 | MTR_3g040700 | 31.163 | 215 | 121 | 8 | 4 | 208 | 26 | 223 | 1.15e-16 | 81.3 |
MS.gene34733.t1 | MTR_2g007450 | 33.953 | 215 | 113 | 10 | 21 | 215 | 16 | 221 | 1.35e-16 | 80.9 |
MS.gene34733.t1 | MTR_7g007080 | 32.579 | 221 | 127 | 7 | 21 | 232 | 4 | 211 | 2.52e-16 | 79.7 |
MS.gene34733.t1 | MTR_7g026500 | 34.673 | 199 | 117 | 7 | 21 | 213 | 14 | 205 | 6.69e-16 | 78.6 |
MS.gene34733.t1 | MTR_8g014220 | 33.962 | 212 | 82 | 6 | 1 | 206 | 1 | 160 | 7.75e-16 | 74.7 |
MS.gene34733.t1 | MTR_5g080710 | 26.870 | 361 | 224 | 15 | 9 | 355 | 26 | 360 | 2.99e-15 | 77.0 |
MS.gene34733.t1 | MTR_1g108820 | 33.628 | 226 | 125 | 10 | 21 | 242 | 8 | 212 | 3.63e-15 | 76.3 |
MS.gene34733.t1 | MTR_7g098510 | 30.242 | 248 | 111 | 12 | 1 | 216 | 1 | 218 | 4.36e-15 | 76.3 |
MS.gene34733.t1 | MTR_1g108820 | 33.628 | 226 | 125 | 10 | 21 | 242 | 8 | 212 | 5.93e-15 | 75.5 |
MS.gene34733.t1 | MTR_2g007500 | 35.385 | 195 | 94 | 8 | 21 | 208 | 14 | 183 | 7.53e-15 | 75.1 |
MS.gene34733.t1 | MTR_4g056030 | 34.562 | 217 | 106 | 10 | 21 | 219 | 9 | 207 | 8.12e-15 | 75.9 |
MS.gene34733.t1 | MTR_4g024770 | 56.522 | 69 | 25 | 2 | 1 | 69 | 8 | 71 | 8.92e-15 | 69.3 |
MS.gene34733.t1 | MTR_7g056433 | 31.776 | 214 | 125 | 7 | 21 | 227 | 12 | 211 | 1.08e-14 | 75.1 |
MS.gene34733.t1 | MTR_7g033990 | 30.588 | 255 | 115 | 11 | 21 | 243 | 11 | 235 | 2.25e-14 | 74.3 |
MS.gene34733.t1 | MTR_3g107100 | 29.808 | 208 | 128 | 8 | 21 | 223 | 11 | 205 | 2.59e-14 | 73.9 |
MS.gene34733.t1 | MTR_3g036250 | 31.313 | 198 | 111 | 8 | 20 | 208 | 4 | 185 | 4.92e-14 | 72.8 |
MS.gene34733.t1 | MTR_1g038710 | 33.019 | 212 | 114 | 8 | 21 | 220 | 19 | 214 | 5.03e-14 | 73.2 |
MS.gene34733.t1 | MTR_4g056040 | 33.473 | 239 | 109 | 10 | 21 | 219 | 9 | 237 | 1.06e-13 | 72.4 |
MS.gene34733.t1 | MTR_7g098570 | 29.412 | 204 | 128 | 4 | 8 | 208 | 7 | 197 | 1.10e-13 | 72.4 |
MS.gene34733.t1 | MTR_7g034115 | 32.850 | 207 | 108 | 8 | 17 | 212 | 7 | 193 | 1.76e-13 | 71.2 |
MS.gene34733.t1 | MTR_5g083890 | 31.304 | 230 | 105 | 9 | 21 | 218 | 6 | 214 | 4.27e-13 | 70.5 |
MS.gene34733.t1 | MTR_7g034110 | 32.663 | 199 | 105 | 8 | 21 | 208 | 11 | 191 | 6.12e-13 | 69.3 |
MS.gene34733.t1 | MTR_7g075820 | 32.407 | 216 | 107 | 8 | 21 | 210 | 6 | 208 | 6.94e-13 | 69.7 |
MS.gene34733.t1 | MTR_2g005990 | 32.093 | 215 | 123 | 9 | 21 | 221 | 6 | 211 | 8.67e-13 | 69.3 |
MS.gene34733.t1 | MTR_4g024745 | 33.182 | 220 | 109 | 8 | 163 | 359 | 10 | 214 | 1.35e-12 | 67.8 |
MS.gene34733.t1 | MTR_4g080590 | 29.808 | 208 | 130 | 6 | 9 | 213 | 11 | 205 | 2.27e-12 | 67.8 |
MS.gene34733.t1 | MTR_3g467400 | 28.155 | 206 | 122 | 8 | 19 | 208 | 1 | 196 | 2.41e-12 | 67.8 |
MS.gene34733.t1 | MTR_1089s0010 | 31.282 | 195 | 111 | 9 | 21 | 208 | 8 | 186 | 2.67e-12 | 67.8 |
MS.gene34733.t1 | MTR_2g007400 | 30.144 | 209 | 128 | 8 | 19 | 215 | 10 | 212 | 3.05e-12 | 67.8 |
MS.gene34733.t1 | MTR_7g088260 | 30.000 | 210 | 127 | 6 | 8 | 213 | 78 | 271 | 4.14e-12 | 67.4 |
MS.gene34733.t1 | MTR_4g080590 | 29.808 | 208 | 130 | 6 | 9 | 213 | 11 | 205 | 4.17e-12 | 67.4 |
MS.gene34733.t1 | MTR_5g045170 | 29.245 | 212 | 126 | 6 | 11 | 214 | 4 | 199 | 5.51e-12 | 67.0 |
MS.gene34733.t1 | MTR_2g008310 | 29.353 | 201 | 120 | 6 | 21 | 215 | 2 | 186 | 5.56e-12 | 67.0 |
MS.gene34733.t1 | MTR_5g039970 | 28.365 | 208 | 137 | 5 | 8 | 212 | 6 | 204 | 8.94e-12 | 65.9 |
MS.gene34733.t1 | MTR_8g014180 | 58.333 | 60 | 20 | 2 | 1 | 60 | 1 | 55 | 8.98e-12 | 60.1 |
MS.gene34733.t1 | MTR_4g092430 | 26.110 | 383 | 236 | 14 | 3 | 359 | 25 | 386 | 9.74e-12 | 66.2 |
MS.gene34733.t1 | MTR_7g034090 | 27.354 | 223 | 131 | 7 | 21 | 213 | 4 | 225 | 1.17e-11 | 65.9 |
MS.gene34733.t1 | MTR_7g056287 | 30.244 | 205 | 128 | 7 | 19 | 219 | 1 | 194 | 1.68e-11 | 65.5 |
MS.gene34733.t1 | MTR_7g033915 | 28.365 | 208 | 116 | 6 | 21 | 223 | 11 | 190 | 1.72e-11 | 65.1 |
MS.gene34733.t1 | MTR_5g039950 | 30.876 | 217 | 114 | 10 | 1 | 208 | 1 | 190 | 2.62e-11 | 65.1 |
MS.gene34733.t1 | MTR_7g098480 | 28.436 | 211 | 132 | 5 | 1 | 208 | 1 | 195 | 2.77e-11 | 65.1 |
MS.gene34733.t1 | MTR_3g023630 | 32.323 | 198 | 107 | 9 | 20 | 208 | 7 | 186 | 2.81e-11 | 64.7 |
MS.gene34733.t1 | MTR_4g134150 | 30.208 | 192 | 109 | 6 | 21 | 208 | 14 | 184 | 3.65e-11 | 62.8 |
MS.gene34733.t1 | MTR_5g058100 | 29.048 | 210 | 124 | 7 | 14 | 215 | 2 | 194 | 3.90e-11 | 64.3 |
MS.gene34733.t1 | MTR_7g056277 | 30.542 | 203 | 126 | 7 | 21 | 219 | 259 | 450 | 4.36e-11 | 64.7 |
MS.gene34733.t1 | MTR_1g492880 | 50.000 | 66 | 22 | 3 | 11 | 72 | 2 | 60 | 4.72e-11 | 59.7 |
MS.gene34733.t1 | MTR_1g053025 | 30.542 | 203 | 119 | 8 | 21 | 212 | 2 | 193 | 4.76e-11 | 63.9 |
MS.gene34733.t1 | MTR_1g492880 | 50.000 | 66 | 22 | 3 | 11 | 72 | 2 | 60 | 4.86e-11 | 59.3 |
MS.gene34733.t1 | MTR_4g092430 | 32.609 | 184 | 103 | 7 | 3 | 182 | 25 | 191 | 5.44e-11 | 63.9 |
MS.gene34733.t1 | MTR_6g018560 | 27.528 | 356 | 203 | 13 | 6 | 330 | 18 | 349 | 6.67e-11 | 63.5 |
MS.gene34733.t1 | MTR_6g040270 | 31.088 | 193 | 110 | 9 | 23 | 208 | 10 | 186 | 6.85e-11 | 63.5 |
MS.gene34733.t1 | MTR_7g033945 | 32.620 | 187 | 82 | 9 | 21 | 189 | 11 | 171 | 7.71e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34733.t1 | AT1G06630 | 30.028 | 353 | 224 | 10 | 21 | 359 | 12 | 355 | 2.44e-26 | 108 |
MS.gene34733.t1 | AT1G06630 | 30.028 | 353 | 224 | 10 | 21 | 359 | 12 | 355 | 2.44e-26 | 108 |
MS.gene34733.t1 | AT1G06630 | 31.818 | 286 | 178 | 8 | 21 | 293 | 12 | 293 | 3.26e-26 | 106 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 21 | 361 | 4.71e-26 | 108 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 12 | 352 | 6.31e-26 | 107 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 12 | 352 | 6.31e-26 | 107 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 12 | 352 | 6.31e-26 | 107 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 12 | 352 | 6.31e-26 | 107 |
MS.gene34733.t1 | AT1G06630 | 30.000 | 350 | 222 | 10 | 21 | 356 | 12 | 352 | 2.24e-25 | 107 |
MS.gene34733.t1 | AT4G14103 | 29.492 | 295 | 159 | 11 | 21 | 291 | 8 | 277 | 1.17e-21 | 95.9 |
MS.gene34733.t1 | AT4G14103 | 29.153 | 295 | 160 | 11 | 21 | 291 | 8 | 277 | 1.41e-21 | 95.1 |
MS.gene34733.t1 | AT4G14103 | 29.153 | 295 | 160 | 11 | 21 | 291 | 8 | 277 | 1.41e-21 | 95.1 |
MS.gene34733.t1 | AT4G14096 | 30.435 | 276 | 147 | 10 | 21 | 272 | 8 | 262 | 2.01e-21 | 95.5 |
MS.gene34733.t1 | AT4G14096 | 30.435 | 276 | 147 | 10 | 21 | 272 | 8 | 262 | 2.01e-21 | 95.5 |
MS.gene34733.t1 | AT4G10400 | 35.354 | 198 | 111 | 8 | 21 | 214 | 2 | 186 | 2.65e-20 | 91.7 |
MS.gene34733.t1 | AT4G10400 | 35.354 | 198 | 111 | 8 | 21 | 214 | 2 | 186 | 2.65e-20 | 91.7 |
MS.gene34733.t1 | AT4G10400 | 35.354 | 198 | 111 | 8 | 21 | 214 | 2 | 186 | 2.65e-20 | 91.7 |
MS.gene34733.t1 | AT3G59200 | 31.863 | 204 | 122 | 6 | 16 | 212 | 2 | 195 | 3.19e-20 | 91.3 |
MS.gene34733.t1 | AT3G59200 | 31.863 | 204 | 122 | 6 | 16 | 212 | 2 | 195 | 4.05e-20 | 92.0 |
MS.gene34733.t1 | AT4G09920 | 34.375 | 192 | 109 | 7 | 21 | 208 | 2 | 180 | 1.56e-19 | 88.6 |
MS.gene34733.t1 | AT4G09920 | 34.375 | 192 | 109 | 7 | 21 | 208 | 2 | 180 | 1.56e-19 | 88.6 |
MS.gene34733.t1 | AT4G09920 | 34.375 | 192 | 109 | 7 | 21 | 208 | 2 | 180 | 1.63e-19 | 87.8 |
MS.gene34733.t1 | AT4G09920 | 34.375 | 192 | 109 | 7 | 21 | 208 | 2 | 180 | 1.63e-19 | 87.8 |
MS.gene34733.t1 | AT4G09920 | 34.375 | 192 | 109 | 7 | 21 | 208 | 2 | 180 | 1.63e-19 | 87.8 |
MS.gene34733.t1 | AT1G16930 | 34.466 | 206 | 98 | 8 | 20 | 212 | 14 | 195 | 1.30e-18 | 87.0 |
MS.gene34733.t1 | AT1G16930 | 34.466 | 206 | 98 | 8 | 20 | 212 | 14 | 195 | 1.30e-18 | 87.0 |
MS.gene34733.t1 | AT1G16930 | 34.466 | 206 | 98 | 8 | 20 | 212 | 14 | 195 | 1.30e-18 | 87.0 |
MS.gene34733.t1 | AT3G59170 | 32.636 | 239 | 124 | 10 | 16 | 223 | 2 | 234 | 3.12e-18 | 86.3 |
MS.gene34733.t1 | AT4G00160 | 37.000 | 200 | 111 | 7 | 17 | 212 | 11 | 199 | 3.36e-18 | 85.9 |
MS.gene34733.t1 | AT3G59230 | 31.553 | 206 | 117 | 7 | 21 | 212 | 12 | 207 | 6.09e-18 | 85.5 |
MS.gene34733.t1 | AT3G59210 | 35.468 | 203 | 106 | 7 | 21 | 212 | 7 | 195 | 1.71e-17 | 84.0 |
MS.gene34733.t1 | AT3G59210 | 35.468 | 203 | 106 | 7 | 21 | 212 | 7 | 195 | 1.71e-17 | 84.0 |
MS.gene34733.t1 | AT3G59210 | 35.468 | 203 | 106 | 7 | 21 | 212 | 7 | 195 | 1.71e-17 | 84.0 |
MS.gene34733.t1 | AT3G59210 | 35.468 | 203 | 106 | 7 | 21 | 212 | 7 | 195 | 1.71e-17 | 84.0 |
MS.gene34733.t1 | AT3G59210 | 35.468 | 203 | 106 | 7 | 21 | 212 | 7 | 195 | 1.71e-17 | 84.0 |
MS.gene34733.t1 | AT3G44810 | 33.498 | 203 | 111 | 7 | 23 | 213 | 9 | 199 | 1.89e-17 | 83.6 |
MS.gene34733.t1 | AT1G69630 | 32.751 | 229 | 127 | 10 | 1 | 223 | 1 | 208 | 1.90e-17 | 83.6 |
MS.gene34733.t1 | AT3G58920 | 27.500 | 400 | 193 | 18 | 21 | 357 | 2 | 367 | 2.27e-17 | 83.6 |
MS.gene34733.t1 | AT3G26922 | 30.702 | 228 | 129 | 9 | 8 | 224 | 1 | 210 | 2.90e-17 | 81.6 |
MS.gene34733.t1 | AT3G26922 | 30.702 | 228 | 129 | 9 | 8 | 224 | 1 | 210 | 2.90e-17 | 81.6 |
MS.gene34733.t1 | AT1G78750 | 33.962 | 212 | 113 | 10 | 21 | 221 | 18 | 213 | 3.56e-17 | 82.8 |
MS.gene34733.t1 | AT1G78750 | 33.962 | 212 | 113 | 10 | 21 | 221 | 18 | 213 | 3.56e-17 | 82.8 |
MS.gene34733.t1 | AT1G64540 | 29.537 | 281 | 135 | 13 | 21 | 272 | 5 | 251 | 1.25e-16 | 81.3 |
MS.gene34733.t1 | AT1G64540 | 29.537 | 281 | 135 | 13 | 21 | 272 | 5 | 251 | 1.25e-16 | 81.3 |
MS.gene34733.t1 | AT3G44060 | 32.308 | 195 | 111 | 5 | 26 | 212 | 4 | 185 | 6.11e-16 | 79.0 |
MS.gene34733.t1 | AT5G56690 | 32.487 | 197 | 117 | 7 | 23 | 213 | 4 | 190 | 7.08e-16 | 78.6 |
MS.gene34733.t1 | AT5G22720 | 29.858 | 211 | 113 | 10 | 21 | 219 | 23 | 210 | 8.72e-16 | 79.0 |
MS.gene34733.t1 | AT2G42720 | 33.166 | 199 | 120 | 7 | 21 | 213 | 2 | 193 | 1.06e-15 | 78.6 |
MS.gene34733.t1 | AT5G53840 | 31.429 | 210 | 111 | 8 | 9 | 212 | 13 | 195 | 1.16e-15 | 78.2 |
MS.gene34733.t1 | AT3G59240 | 29.126 | 206 | 127 | 6 | 15 | 212 | 2 | 196 | 1.20e-15 | 78.6 |
MS.gene34733.t1 | AT5G41840 | 28.774 | 212 | 124 | 10 | 18 | 212 | 11 | 212 | 3.22e-15 | 77.4 |
MS.gene34733.t1 | AT4G00320 | 30.693 | 202 | 118 | 9 | 21 | 208 | 13 | 206 | 3.36e-15 | 77.0 |
MS.gene34733.t1 | AT4G13965 | 31.429 | 210 | 113 | 8 | 12 | 212 | 1 | 188 | 3.44e-15 | 76.6 |
MS.gene34733.t1 | AT5G38390 | 31.658 | 199 | 112 | 7 | 21 | 215 | 2 | 180 | 3.90e-15 | 76.6 |
MS.gene34733.t1 | AT3G59160 | 25.926 | 324 | 173 | 12 | 21 | 296 | 13 | 317 | 4.10e-15 | 76.6 |
MS.gene34733.t1 | AT4G13960 | 31.156 | 199 | 118 | 6 | 21 | 212 | 2 | 188 | 4.49e-15 | 76.6 |
MS.gene34733.t1 | AT4G13960 | 31.156 | 199 | 118 | 6 | 21 | 212 | 2 | 188 | 4.49e-15 | 76.6 |
MS.gene34733.t1 | AT5G60610 | 33.838 | 198 | 109 | 8 | 21 | 214 | 2 | 181 | 5.46e-15 | 75.9 |
MS.gene34733.t1 | AT5G60610 | 33.838 | 198 | 109 | 8 | 21 | 214 | 2 | 181 | 5.46e-15 | 75.9 |
MS.gene34733.t1 | AT1G58310 | 29.565 | 230 | 120 | 9 | 21 | 223 | 8 | 222 | 5.79e-15 | 76.3 |
MS.gene34733.t1 | AT5G41830 | 29.060 | 234 | 141 | 9 | 21 | 235 | 13 | 240 | 8.79e-15 | 75.9 |
MS.gene34733.t1 | AT5G38396 | 27.426 | 237 | 146 | 8 | 21 | 241 | 2 | 228 | 9.11e-15 | 75.5 |
MS.gene34733.t1 | AT4G15060 | 32.420 | 219 | 132 | 8 | 1 | 213 | 4 | 212 | 1.07e-14 | 75.5 |
MS.gene34733.t1 | AT4G13985 | 29.293 | 198 | 133 | 5 | 21 | 215 | 19 | 212 | 3.18e-14 | 73.9 |
MS.gene34733.t1 | AT4G15060 | 32.487 | 197 | 119 | 7 | 21 | 213 | 172 | 358 | 4.02e-14 | 73.9 |
MS.gene34733.t1 | AT3G49150 | 30.653 | 199 | 120 | 7 | 21 | 212 | 16 | 203 | 4.63e-14 | 73.6 |
MS.gene34733.t1 | AT4G26340 | 32.000 | 200 | 112 | 6 | 21 | 213 | 2 | 184 | 4.76e-14 | 73.2 |
MS.gene34733.t1 | AT5G56560 | 28.319 | 226 | 143 | 6 | 23 | 244 | 7 | 217 | 5.50e-14 | 73.2 |
MS.gene34733.t1 | AT3G59190 | 27.451 | 204 | 124 | 6 | 21 | 212 | 12 | 203 | 6.85e-14 | 72.8 |
MS.gene34733.t1 | AT2G26030 | 26.685 | 371 | 214 | 16 | 21 | 356 | 4 | 351 | 7.08e-14 | 72.8 |
MS.gene34733.t1 | AT3G52680 | 34.951 | 206 | 106 | 10 | 17 | 212 | 16 | 203 | 8.00e-14 | 72.4 |
MS.gene34733.t1 | AT3G59190 | 27.451 | 204 | 124 | 6 | 21 | 212 | 12 | 203 | 9.31e-14 | 72.8 |
MS.gene34733.t1 | AT2G26030 | 26.757 | 370 | 213 | 16 | 21 | 355 | 4 | 350 | 1.18e-13 | 72.0 |
MS.gene34733.t1 | AT2G26030 | 26.757 | 370 | 213 | 16 | 21 | 355 | 4 | 350 | 1.18e-13 | 72.0 |
MS.gene34733.t1 | AT5G56440 | 34.597 | 211 | 91 | 11 | 21 | 212 | 2 | 184 | 1.19e-13 | 72.0 |
MS.gene34733.t1 | AT1G51370 | 31.443 | 194 | 104 | 7 | 21 | 208 | 19 | 189 | 1.37e-13 | 71.6 |
MS.gene34733.t1 | AT1G51370 | 31.443 | 194 | 104 | 7 | 21 | 208 | 19 | 189 | 1.86e-13 | 71.6 |
MS.gene34733.t1 | AT1G51370 | 31.443 | 194 | 104 | 7 | 21 | 208 | 19 | 189 | 1.94e-13 | 71.2 |
MS.gene34733.t1 | AT3G03030 | 28.780 | 205 | 121 | 8 | 21 | 212 | 2 | 194 | 1.96e-13 | 70.9 |
MS.gene34733.t1 | AT5G22610 | 28.800 | 250 | 150 | 9 | 1 | 237 | 1 | 235 | 2.36e-13 | 71.2 |
MS.gene34733.t1 | AT3G03030 | 28.293 | 205 | 122 | 7 | 21 | 212 | 2 | 194 | 2.53e-13 | 71.2 |
MS.gene34733.t1 | AT3G58820 | 29.747 | 158 | 94 | 5 | 21 | 170 | 2 | 150 | 2.75e-13 | 70.9 |
MS.gene34733.t1 | AT5G56410 | 29.756 | 205 | 115 | 7 | 28 | 213 | 10 | 204 | 3.53e-13 | 70.9 |
MS.gene34733.t1 | AT5G56400 | 29.817 | 218 | 128 | 7 | 1 | 212 | 16 | 214 | 3.55e-13 | 70.9 |
MS.gene34733.t1 | AT5G38392 | 28.571 | 203 | 126 | 7 | 21 | 212 | 2 | 196 | 3.99e-13 | 68.2 |
MS.gene34733.t1 | AT1G66310 | 30.332 | 211 | 123 | 8 | 7 | 212 | 7 | 198 | 4.63e-13 | 70.5 |
MS.gene34733.t1 | AT5G56370 | 33.333 | 195 | 109 | 8 | 21 | 210 | 2 | 180 | 5.97e-13 | 69.3 |
MS.gene34733.t1 | AT5G18780 | 32.828 | 198 | 108 | 9 | 21 | 212 | 11 | 189 | 7.48e-13 | 69.7 |
MS.gene34733.t1 | AT5G18780 | 32.828 | 198 | 108 | 9 | 21 | 212 | 11 | 189 | 7.48e-13 | 69.7 |
MS.gene34733.t1 | AT1G60400 | 30.542 | 203 | 111 | 7 | 21 | 212 | 14 | 197 | 8.15e-13 | 69.3 |
MS.gene34733.t1 | AT5G56370 | 28.625 | 269 | 154 | 11 | 21 | 272 | 2 | 249 | 8.26e-13 | 69.7 |
MS.gene34733.t1 | AT5G56370 | 28.625 | 269 | 154 | 11 | 21 | 272 | 2 | 249 | 8.26e-13 | 69.7 |
MS.gene34733.t1 | AT5G18780 | 32.828 | 198 | 108 | 9 | 21 | 212 | 11 | 189 | 1.03e-12 | 68.9 |
MS.gene34733.t1 | AT5G18780 | 32.828 | 198 | 108 | 9 | 21 | 212 | 11 | 189 | 1.03e-12 | 68.9 |
MS.gene34733.t1 | AT5G56560 | 29.897 | 194 | 118 | 5 | 23 | 213 | 7 | 185 | 1.29e-12 | 69.3 |
MS.gene34733.t1 | AT3G50710 | 26.316 | 361 | 213 | 13 | 21 | 359 | 2 | 331 | 1.60e-12 | 68.6 |
MS.gene34733.t1 | AT4G00315 | 32.487 | 197 | 120 | 7 | 21 | 213 | 2 | 189 | 2.41e-12 | 68.2 |
MS.gene34733.t1 | AT5G22610 | 29.680 | 219 | 132 | 8 | 1 | 212 | 1 | 204 | 2.50e-12 | 68.2 |
MS.gene34733.t1 | AT1G56610 | 32.653 | 196 | 108 | 9 | 26 | 212 | 15 | 195 | 2.79e-12 | 68.2 |
MS.gene34733.t1 | AT5G35995 | 31.658 | 199 | 111 | 7 | 21 | 212 | 5 | 185 | 2.87e-12 | 68.2 |
MS.gene34733.t1 | AT5G35995 | 31.658 | 199 | 111 | 7 | 21 | 212 | 5 | 185 | 2.87e-12 | 68.2 |
MS.gene34733.t1 | AT1G55030 | 29.778 | 225 | 118 | 9 | 15 | 224 | 3 | 202 | 3.23e-12 | 67.8 |
MS.gene34733.t1 | AT5G56380 | 32.381 | 210 | 118 | 10 | 21 | 221 | 2 | 196 | 3.94e-12 | 67.4 |
MS.gene34733.t1 | AT5G56380 | 32.381 | 210 | 118 | 10 | 21 | 221 | 2 | 196 | 3.94e-12 | 67.4 |
MS.gene34733.t1 | AT1G55030 | 29.778 | 225 | 118 | 9 | 15 | 224 | 13 | 212 | 4.05e-12 | 67.4 |
MS.gene34733.t1 | AT1G56610 | 32.653 | 196 | 108 | 9 | 26 | 212 | 78 | 258 | 5.75e-12 | 67.4 |
MS.gene34733.t1 | AT3G59150 | 31.868 | 182 | 100 | 8 | 20 | 192 | 12 | 178 | 1.17e-11 | 66.2 |
MS.gene34733.t1 | AT3G26930 | 33.491 | 212 | 111 | 8 | 21 | 224 | 21 | 210 | 1.75e-11 | 65.5 |
MS.gene34733.t1 | AT1G13570 | 30.204 | 245 | 122 | 13 | 21 | 252 | 6 | 214 | 2.19e-11 | 65.1 |
MS.gene34733.t1 | AT1G13570 | 30.204 | 245 | 122 | 13 | 21 | 252 | 6 | 214 | 2.19e-11 | 65.1 |
MS.gene34733.t1 | AT3G28410 | 27.041 | 196 | 121 | 4 | 20 | 213 | 27 | 202 | 3.38e-11 | 64.7 |
MS.gene34733.t1 | AT1G13570 | 30.204 | 245 | 122 | 13 | 21 | 252 | 6 | 214 | 3.52e-11 | 63.9 |
MS.gene34733.t1 | AT1G05080 | 30.841 | 214 | 123 | 8 | 21 | 224 | 13 | 211 | 4.60e-11 | 64.3 |
MS.gene34733.t1 | AT3G51530 | 31.746 | 189 | 112 | 6 | 21 | 208 | 30 | 202 | 6.00e-11 | 63.9 |
MS.gene34733.t1 | AT5G53640 | 29.469 | 207 | 113 | 8 | 15 | 212 | 16 | 198 | 6.37e-11 | 62.0 |
MS.gene34733.t1 | AT5G25860 | 31.100 | 209 | 111 | 9 | 21 | 208 | 12 | 208 | 8.19e-11 | 63.5 |
MS.gene34733.t1 | AT1G66300 | 27.919 | 197 | 120 | 6 | 21 | 212 | 29 | 208 | 9.52e-11 | 63.2 |
MS.gene34733.t1 | AT3G62440 | 26.794 | 209 | 126 | 5 | 21 | 212 | 2 | 200 | 9.53e-11 | 63.2 |
Find 86 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAGATGATGACATGTTTC+TGG | 0.246801 | 8.1:-44999552 | MS.gene34733:CDS |
GATTGTTGATACGGAGGTTT+TGG | 0.266033 | 8.1:+44999763 | None:intergenic |
GAAACTCCACCATGTCCTTT+TGG | 0.274770 | 8.1:-44998314 | MS.gene34733:CDS |
CTCGCCGCTGGCGCCATCTC+TGG | 0.310072 | 8.1:-44999730 | MS.gene34733:CDS |
CTTCATATATATCTCCATTT+CGG | 0.317442 | 8.1:+44998011 | None:intergenic |
ATTGCTAAATTTCAAACTCT+TGG | 0.321121 | 8.1:+44998192 | None:intergenic |
TTGCTAAATTTCAAACTCTT+GGG | 0.322765 | 8.1:+44998193 | None:intergenic |
TGATGTAAATTGCAAAGTTC+TGG | 0.338388 | 8.1:+44997820 | None:intergenic |
GAGCAAAAGATTCGAGTTAA+AGG | 0.347067 | 8.1:+44997777 | None:intergenic |
TCAATTGTTGCCCTTCTCTC+TGG | 0.354482 | 8.1:-44998289 | MS.gene34733:CDS |
TCTTCGCCCGCCGCGAGTCC+CGG | 0.362569 | 8.1:-44999607 | MS.gene34733:CDS |
AATTCCTATGTCGGGATAAC+AGG | 0.364711 | 8.1:+44998135 | None:intergenic |
TCTTATAATTCAGAGCAATA+AGG | 0.365060 | 8.1:-44997722 | None:intergenic |
TTCGGAGGTTGTAGAGAATA+GGG | 0.396639 | 8.1:+44998029 | None:intergenic |
ATGTGGCTCAATGCCGCTAA+TGG | 0.398356 | 8.1:-44999515 | MS.gene34733:CDS |
TCTCTCTCGTTTCTCGCCGC+TGG | 0.398888 | 8.1:-44999742 | MS.gene34733:CDS |
GTGCAGTTGAAGAGAGAAGA+AGG | 0.423600 | 8.1:+44999428 | None:intergenic |
CGGGTGTTCGCAGTAACAAT+TGG | 0.430664 | 8.1:+44999670 | None:intergenic |
TTTCGGAGGTTGTAGAGAAT+AGG | 0.434072 | 8.1:+44998028 | None:intergenic |
TTGAAACACCGCAGTCTTGA+CGG | 0.437699 | 8.1:-44998394 | MS.gene34733:intron |
ATTCTCTACAACCTCCGAAA+TGG | 0.442564 | 8.1:-44998025 | MS.gene34733:CDS |
CTTCAGTGATGGAAAATAAA+CGG | 0.451697 | 8.1:+44998342 | None:intergenic |
TGAAGAGAGAAGAAGGGAAA+AGG | 0.452425 | 8.1:+44999435 | None:intergenic |
TGGCTAATTGCATTGATATG+TGG | 0.457305 | 8.1:-44999532 | MS.gene34733:CDS |
TTATAAGAACTTGAAGCATA+TGG | 0.458855 | 8.1:+44997737 | None:intergenic |
CTTCGCCCGCCGCGAGTCCC+GGG | 0.459241 | 8.1:-44999606 | MS.gene34733:CDS |
CACGGGGCAGCCAGAGAGAA+GGG | 0.476976 | 8.1:+44998279 | None:intergenic |
CAACAAATTTACTTTCAGAT+GGG | 0.478832 | 8.1:+44998053 | None:intergenic |
TCAACAAATTTACTTTCAGA+TGG | 0.480545 | 8.1:+44998052 | None:intergenic |
AATATCCCGGGACTCGCGGC+GGG | 0.480745 | 8.1:+44999601 | None:intergenic |
GGACTCGCGGCGGGCGAAGA+CGG | 0.487568 | 8.1:+44999610 | None:intergenic |
GCCAATGTAATTCCTATGTC+GGG | 0.493069 | 8.1:+44998127 | None:intergenic |
GGGCAACAATTGAGTCCAAA+AGG | 0.494834 | 8.1:+44998299 | None:intergenic |
TGCTAAATTTCAAACTCTTG+GGG | 0.496640 | 8.1:+44998194 | None:intergenic |
TGCAGTTGAAGAGAGAAGAA+GGG | 0.509530 | 8.1:+44999429 | None:intergenic |
AACGAGAGAGATTGTTGATA+CGG | 0.510527 | 8.1:+44999754 | None:intergenic |
GCACCAACCTCGTCTCTCTC+AGG | 0.511577 | 8.1:-44999409 | MS.gene34733:intron |
GCACGGGGCAGCCAGAGAGA+AGG | 0.511707 | 8.1:+44998278 | None:intergenic |
AACAAATTTACTTTCAGATG+GGG | 0.514411 | 8.1:+44998054 | None:intergenic |
AACAAGGTGGGGTCCATTAG+CGG | 0.520731 | 8.1:+44999502 | None:intergenic |
ATTGAAGATGCTTCCAGAGA+TGG | 0.526620 | 8.1:+44999717 | None:intergenic |
CAAAAGCTGCGTCTCAATTG+TGG | 0.529093 | 8.1:-44999578 | MS.gene34733:CDS |
ATAGCAAAAGTTTCGAGCAC+GGG | 0.532840 | 8.1:+44998262 | None:intergenic |
GAACAAAACGACGTCGTCAT+CGG | 0.535611 | 8.1:-44999845 | MS.gene34733:CDS |
GGCCAATGTAATTCCTATGT+CGG | 0.551371 | 8.1:+44998126 | None:intergenic |
CATATATATCTCCATTTCGG+AGG | 0.553563 | 8.1:+44998014 | None:intergenic |
GCTAAATTTCAAACTCTTGG+GGG | 0.558203 | 8.1:+44998195 | None:intergenic |
GTAACAATTGGAGTCGGAGT+CGG | 0.559467 | 8.1:+44999682 | None:intergenic |
ATGTGGCAGAGTATAGAGTC+TGG | 0.559921 | 8.1:+44999803 | None:intergenic |
CTAAATTTCAAACTCTTGGG+GGG | 0.561878 | 8.1:+44998196 | None:intergenic |
TGACGGTGCAATCTATATGA+AGG | 0.562681 | 8.1:-44998377 | MS.gene34733:CDS |
AGTTTCAGCATCTTCAGTGA+TGG | 0.564437 | 8.1:+44998331 | None:intergenic |
GCTTCCAGAGATGGCGCCAG+CGG | 0.565504 | 8.1:+44999726 | None:intergenic |
TTTGAATATCCCGGGACTCG+CGG | 0.566592 | 8.1:+44999597 | None:intergenic |
GGGAGGTGGTGGTACACCAT+CGG | 0.567550 | 8.1:+44998216 | None:intergenic |
TTAGCAATAACAATTTCACT+TGG | 0.568586 | 8.1:-44998177 | MS.gene34733:CDS |
CCACGCTCTGCAAGTTGTCA+AGG | 0.570001 | 8.1:+44998101 | None:intergenic |
GCTGCGTCATTCGACGTCAA+AGG | 0.575927 | 8.1:-44997969 | MS.gene34733:intron |
CAAAAGATTCGAGTTAAAGG+AGG | 0.581028 | 8.1:+44997780 | None:intergenic |
GAGAGACAGATCAACAAGGT+GGG | 0.594284 | 8.1:+44999490 | None:intergenic |
GCAGAGTATAGAGTCTGGTA+AGG | 0.599401 | 8.1:+44999808 | None:intergenic |
CCTTGACAACTTGCAGAGCG+TGG | 0.603355 | 8.1:-44998101 | MS.gene34733:CDS |
TCCCGACATAGGAATTACAT+TGG | 0.608308 | 8.1:-44998128 | MS.gene34733:CDS |
TTCTGGATAATTTAGAACTG+TGG | 0.609020 | 8.1:+44997837 | None:intergenic |
CAATTGAGTCCAAAAGGACA+TGG | 0.611473 | 8.1:+44998305 | None:intergenic |
AATAGCAAAAGTTTCGAGCA+CGG | 0.613146 | 8.1:+44998261 | None:intergenic |
GAATATCCCGGGACTCGCGG+CGG | 0.615196 | 8.1:+44999600 | None:intergenic |
GAGAGAGATTGTTGATACGG+AGG | 0.615530 | 8.1:+44999757 | None:intergenic |
GACTCCTGTTATCCCGACAT+AGG | 0.616754 | 8.1:-44998139 | MS.gene34733:CDS |
AGAGACAGATCAACAAGGTG+GGG | 0.620971 | 8.1:+44999491 | None:intergenic |
TTCGCAGTAACAATTGGAGT+CGG | 0.623591 | 8.1:+44999676 | None:intergenic |
TTGAGAGGAATGAAAGGATG+TGG | 0.635310 | 8.1:+44999786 | None:intergenic |
TAGCAAAAGTTTCGAGCACG+GGG | 0.637509 | 8.1:+44998263 | None:intergenic |
GGTGTTAACGAATGATGCAA+AGG | 0.638395 | 8.1:+44999631 | None:intergenic |
AAAAGATTCGAGTTAAAGGA+GGG | 0.641164 | 8.1:+44997781 | None:intergenic |
GCTCTGCAAGTTGTCAAGGA+CGG | 0.642771 | 8.1:+44998105 | None:intergenic |
ATACCTGAGAGAGACGAGGT+TGG | 0.651019 | 8.1:+44999406 | None:intergenic |
TGACAACTTGCAGAGCGTGG+TGG | 0.655980 | 8.1:-44998098 | MS.gene34733:CDS |
TACACCATCGGTAAAAGATG+TGG | 0.661373 | 8.1:+44998228 | None:intergenic |
TTTAGAACTGTGGTGTGAGG+TGG | 0.668163 | 8.1:+44997847 | None:intergenic |
AAGAAAGAGAAACATTTATG+CGG | 0.668329 | 8.1:-44997991 | MS.gene34733:CDS |
TAATTTAGAACTGTGGTGTG+AGG | 0.669445 | 8.1:+44997844 | None:intergenic |
TTGAGTCCAAAAGGACATGG+TGG | 0.681011 | 8.1:+44998308 | None:intergenic |
CGGTGAGAGACAGATCAACA+AGG | 0.685615 | 8.1:+44999486 | None:intergenic |
TGAGAGACAGATCAACAAGG+TGG | 0.688449 | 8.1:+44999489 | None:intergenic |
TAAGATACCTGAGAGAGACG+AGG | 0.719847 | 8.1:+44999402 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGCTATCTTATAATTATGAA+AGG | - | chr8.1:44998428-44998447 | MS.gene34733:intron | 20.0% |
! | AAAAACATCTAGCGAATATA+AGG | + | chr8.1:44998701-44998720 | None:intergenic | 25.0% |
! | AACAAATTTACTTTCAGATG+GGG | + | chr8.1:44999553-44999572 | None:intergenic | 25.0% |
! | AAGAAAGAGAAACATTTATG+CGG | - | chr8.1:44999613-44999632 | MS.gene34733:CDS | 25.0% |
! | AATTCACATTAATTGTATCC+TGG | - | chr8.1:44998743-44998762 | MS.gene34733:intron | 25.0% |
! | ATTGCTAAATTTCAAACTCT+TGG | + | chr8.1:44999415-44999434 | None:intergenic | 25.0% |
! | CAACAAATTTACTTTCAGAT+GGG | + | chr8.1:44999554-44999573 | None:intergenic | 25.0% |
! | CTTCATATATATCTCCATTT+CGG | + | chr8.1:44999596-44999615 | None:intergenic | 25.0% |
! | TAAAAGATGATAATCTACCT+AGG | + | chr8.1:44999068-44999087 | None:intergenic | 25.0% |
! | TCAACAAATTTACTTTCAGA+TGG | + | chr8.1:44999555-44999574 | None:intergenic | 25.0% |
! | TTAGCAATAACAATTTCACT+TGG | - | chr8.1:44999427-44999446 | MS.gene34733:CDS | 25.0% |
! | TTATAAGAACTTGAAGCATA+TGG | + | chr8.1:44999870-44999889 | None:intergenic | 25.0% |
! | TTGCTAAATTTCAAACTCTT+GGG | + | chr8.1:44999414-44999433 | None:intergenic | 25.0% |
!! | AACAAAGCATTAATTGTCTA+AGG | + | chr8.1:44998274-44998293 | None:intergenic | 25.0% |
!! | GGTAGATTATCATCTTTTAA+AGG | - | chr8.1:44999069-44999088 | MS.gene34733:intron | 25.0% |
!! | GTGAAGTTTTACTGTTATTA+TGG | - | chr8.1:44999657-44999676 | MS.gene34733:CDS | 25.0% |
!! | TAGACAATTAATGCTTTGTT+TGG | - | chr8.1:44998274-44998293 | MS.gene34733:CDS | 25.0% |
!! | TATATTCGCTAGATGTTTTT+CGG | - | chr8.1:44998701-44998720 | MS.gene34733:intron | 25.0% |
!!! | AGATTATCATCTTTTAAAGG+TGG | - | chr8.1:44999072-44999091 | MS.gene34733:intron | 25.0% |
!!! | TTTTTCAATTAAGACCACAT+GGG | - | chr8.1:44998484-44998503 | MS.gene34733:intron | 25.0% |
!!! | TTTTTTCAATTAAGACCACA+TGG | - | chr8.1:44998483-44998502 | MS.gene34733:intron | 25.0% |
AGAAAATGACGTTTACCAAA+CGG | - | chr8.1:44998608-44998627 | MS.gene34733:intron | 30.0% | |
GTATCCATGACAGTTAAAAA+CGG | + | chr8.1:44998141-44998160 | None:intergenic | 30.0% | |
TAAATTATTACCGTTGTCAG+CGG | - | chr8.1:44999012-44999031 | MS.gene34733:intron | 30.0% | |
TGATGTAAATTGCAAAGTTC+TGG | + | chr8.1:44999787-44999806 | None:intergenic | 30.0% | |
TGCTAAATTTCAAACTCTTG+GGG | + | chr8.1:44999413-44999432 | None:intergenic | 30.0% | |
TTAATGTGAATTGTCTATGC+TGG | + | chr8.1:44998735-44998754 | None:intergenic | 30.0% | |
! | AAAAGATTCGAGTTAAAGGA+GGG | + | chr8.1:44999826-44999845 | None:intergenic | 30.0% |
! | AATATAAGGTTTGTTTGGCA+AGG | + | chr8.1:44998687-44998706 | None:intergenic | 30.0% |
! | ACTGCATTACATGGTAATTT+TGG | + | chr8.1:44999124-44999143 | None:intergenic | 30.0% |
! | CTTCAGTGATGGAAAATAAA+CGG | + | chr8.1:44999265-44999284 | None:intergenic | 30.0% |
! | TAGCGAATATAAGGTTTGTT+TGG | + | chr8.1:44998692-44998711 | None:intergenic | 30.0% |
! | TTATTCCAATTTTACCCATG+TGG | + | chr8.1:44998501-44998520 | None:intergenic | 30.0% |
! | TTCTGGATAATTTAGAACTG+TGG | + | chr8.1:44999770-44999789 | None:intergenic | 30.0% |
AACGAGAGAGATTGTTGATA+CGG | + | chr8.1:44997853-44997872 | None:intergenic | 35.0% | |
AATAGCAAAAGTTTCGAGCA+CGG | + | chr8.1:44999346-44999365 | None:intergenic | 35.0% | |
AGTGATTGACAACACATCAT+TGG | + | chr8.1:44998860-44998879 | None:intergenic | 35.0% | |
ATAACGAGAACTGCATTACA+TGG | + | chr8.1:44999133-44999152 | None:intergenic | 35.0% | |
CATATATATCTCCATTTCGG+AGG | + | chr8.1:44999593-44999612 | None:intergenic | 35.0% | |
CTAAATTTCAAACTCTTGGG+GGG | + | chr8.1:44999411-44999430 | None:intergenic | 35.0% | |
CTCTCAGGTATCTTAATCTA+TGG | - | chr8.1:44998210-44998229 | MS.gene34733:CDS | 35.0% | |
GCTAAATTTCAAACTCTTGG+GGG | + | chr8.1:44999412-44999431 | None:intergenic | 35.0% | |
GTATCTGTTGTCTATAACCT+AGG | - | chr8.1:44999048-44999067 | MS.gene34733:intron | 35.0% | |
TAAGACCACATGGGTAAAAT+TGG | - | chr8.1:44998493-44998512 | MS.gene34733:intron | 35.0% | |
TCCACTATAAGCTACCTTAT+CGG | + | chr8.1:44998369-44998388 | None:intergenic | 35.0% | |
TCGCAACTCATTAATTGATG+CGG | - | chr8.1:44998902-44998921 | MS.gene34733:intron | 35.0% | |
TGGCAAAAACTAGGGAATAA+CGG | - | chr8.1:44998294-44998313 | MS.gene34733:CDS | 35.0% | |
! | CAAAAGATTCGAGTTAAAGG+AGG | + | chr8.1:44999827-44999846 | None:intergenic | 35.0% |
! | GAGCAAAAGATTCGAGTTAA+AGG | + | chr8.1:44999830-44999849 | None:intergenic | 35.0% |
! | GTTTACCAAACGGATCTTTT+CGG | - | chr8.1:44998618-44998637 | MS.gene34733:intron | 35.0% |
! | TAATTTAGAACTGTGGTGTG+AGG | + | chr8.1:44999763-44999782 | None:intergenic | 35.0% |
! | TGGCTAATTGCATTGATATG+TGG | - | chr8.1:44998072-44998091 | MS.gene34733:CDS | 35.0% |
!! | AAAACTAGGGAATAACGGAT+AGG | - | chr8.1:44998299-44998318 | MS.gene34733:CDS | 35.0% |
!! | CGTTTTGTTCTTCTGCTTTT+TGG | + | chr8.1:44997749-44997768 | None:intergenic | 35.0% |
!! | GCTTTGTTTGGCAAAAACTA+GGG | - | chr8.1:44998286-44998305 | MS.gene34733:CDS | 35.0% |
!! | TGCTTTGTTTGGCAAAAACT+AGG | - | chr8.1:44998285-44998304 | MS.gene34733:CDS | 35.0% |
!! | TTTTGGTTGAGAGGAATGAA+AGG | + | chr8.1:44997827-44997846 | None:intergenic | 35.0% |
!!! | AAGGTTTTGAAGAGTTGTTG+CGG | + | chr8.1:44997957-44997976 | None:intergenic | 35.0% |
AATTCCTATGTCGGGATAAC+AGG | + | chr8.1:44999472-44999491 | None:intergenic | 40.0% | |
ACTCATTAATTGATGCGGCA+AGG | - | chr8.1:44998907-44998926 | MS.gene34733:intron | 40.0% | |
AGTTTCAGCATCTTCAGTGA+TGG | + | chr8.1:44999276-44999295 | None:intergenic | 40.0% | |
ATAGCAAAAGTTTCGAGCAC+GGG | + | chr8.1:44999345-44999364 | None:intergenic | 40.0% | |
ATTCTCTACAACCTCCGAAA+TGG | - | chr8.1:44999579-44999598 | MS.gene34733:CDS | 40.0% | |
ATTGAAGATGCTTCCAGAGA+TGG | + | chr8.1:44997890-44997909 | None:intergenic | 40.0% | |
ATTGATACTACCGCTGACAA+CGG | + | chr8.1:44999025-44999044 | None:intergenic | 40.0% | |
CAATTGAGTCCAAAAGGACA+TGG | + | chr8.1:44999302-44999321 | None:intergenic | 40.0% | |
GCCAATGTAATTCCTATGTC+GGG | + | chr8.1:44999480-44999499 | None:intergenic | 40.0% | |
GGCCAATGTAATTCCTATGT+CGG | + | chr8.1:44999481-44999500 | None:intergenic | 40.0% | |
GGTGTTAACGAATGATGCAA+AGG | + | chr8.1:44997976-44997995 | None:intergenic | 40.0% | |
TACACCATCGGTAAAAGATG+TGG | + | chr8.1:44999379-44999398 | None:intergenic | 40.0% | |
TCCCGACATAGGAATTACAT+TGG | - | chr8.1:44999476-44999495 | MS.gene34733:CDS | 40.0% | |
TCCGCTACAAGCTAACTTAT+CGG | + | chr8.1:44998343-44998362 | None:intergenic | 40.0% | |
TGAAGAGAGAAGAAGGGAAA+AGG | + | chr8.1:44998172-44998191 | None:intergenic | 40.0% | |
TGACGGTGCAATCTATATGA+AGG | - | chr8.1:44999227-44999246 | MS.gene34733:intron | 40.0% | |
TGCAGATGATGACATGTTTC+TGG | - | chr8.1:44998052-44998071 | MS.gene34733:CDS | 40.0% | |
TGCAGTTGAAGAGAGAAGAA+GGG | + | chr8.1:44998178-44998197 | None:intergenic | 40.0% | |
TTCGCAGTAACAATTGGAGT+CGG | + | chr8.1:44997931-44997950 | None:intergenic | 40.0% | |
TTCGGAGGTTGTAGAGAATA+GGG | + | chr8.1:44999578-44999597 | None:intergenic | 40.0% | |
TTGAGAGGAATGAAAGGATG+TGG | + | chr8.1:44997821-44997840 | None:intergenic | 40.0% | |
TTTCGGAGGTTGTAGAGAAT+AGG | + | chr8.1:44999579-44999598 | None:intergenic | 40.0% | |
TTTGACCGAAAAGATCCGTT+TGG | + | chr8.1:44998626-44998645 | None:intergenic | 40.0% | |
! | AGCTGACTGAATTTGTTTCG+TGG | - | chr8.1:44998402-44998421 | MS.gene34733:intron | 40.0% |
! | ATCACCACATCTTTTACCGA+TGG | - | chr8.1:44999372-44999391 | MS.gene34733:intron | 40.0% |
! | GATTGTTGATACGGAGGTTT+TGG | + | chr8.1:44997844-44997863 | None:intergenic | 40.0% |
! | TTGTTGTTGTGTACAAGCAG+TGG | - | chr8.1:44999734-44999753 | MS.gene34733:CDS | 40.0% |
!! | AGGTAGCTTATAGTGGATAG+TGG | - | chr8.1:44998372-44998391 | MS.gene34733:CDS | 40.0% |
!! | CTCACCGTTTTTAACTGTCA+TGG | - | chr8.1:44998134-44998153 | MS.gene34733:CDS | 40.0% |
!!! | AGGTTTTGAAGAGTTGTTGC+GGG | + | chr8.1:44997956-44997975 | None:intergenic | 40.0% |
!!! | CTTCTGCTTTTTGGAGTTTG+AGG | + | chr8.1:44997740-44997759 | None:intergenic | 40.0% |
AATTTCAAACTCTTGGGGGG+AGG | + | chr8.1:44999408-44999427 | None:intergenic | 45.0% | |
AGAGACAGATCAACAAGGTG+GGG | + | chr8.1:44998116-44998135 | None:intergenic | 45.0% | |
ATGTGGCAGAGTATAGAGTC+TGG | + | chr8.1:44997804-44997823 | None:intergenic | 45.0% | |
CAAAAGCTGCGTCTCAATTG+TGG | - | chr8.1:44998026-44998045 | MS.gene34733:CDS | 45.0% | |
GAACAAAACGACGTCGTCAT+CGG | - | chr8.1:44997759-44997778 | MS.gene34733:CDS | 45.0% | |
GAGAGACAGATCAACAAGGT+GGG | + | chr8.1:44998117-44998136 | None:intergenic | 45.0% | |
GAGAGAGATTGTTGATACGG+AGG | + | chr8.1:44997850-44997869 | None:intergenic | 45.0% | |
GCAGAGTATAGAGTCTGGTA+AGG | + | chr8.1:44997799-44997818 | None:intergenic | 45.0% | |
GCCGATAAGGTAGCTTATAG+TGG | - | chr8.1:44998365-44998384 | MS.gene34733:CDS | 45.0% | |
GGGCAACAATTGAGTCCAAA+AGG | + | chr8.1:44999308-44999327 | None:intergenic | 45.0% | |
GTAACAATTGGAGTCGGAGT+CGG | + | chr8.1:44997925-44997944 | None:intergenic | 45.0% | |
GTGCAGTTGAAGAGAGAAGA+AGG | + | chr8.1:44998179-44998198 | None:intergenic | 45.0% | |
TAACTACATCCGTGATCCGT+CGG | + | chr8.1:44998783-44998802 | None:intergenic | 45.0% | |
TAAGATACCTGAGAGAGACG+AGG | + | chr8.1:44998205-44998224 | None:intergenic | 45.0% | |
TAGCAAAAGTTTCGAGCACG+GGG | + | chr8.1:44999344-44999363 | None:intergenic | 45.0% | |
TCAATTGTTGCCCTTCTCTC+TGG | - | chr8.1:44999315-44999334 | MS.gene34733:intron | 45.0% | |
TGAGAGACAGATCAACAAGG+TGG | + | chr8.1:44998118-44998137 | None:intergenic | 45.0% | |
TTGAAACACCGCAGTCTTGA+CGG | - | chr8.1:44999210-44999229 | MS.gene34733:intron | 45.0% | |
TTGAGTCCAAAAGGACATGG+TGG | + | chr8.1:44999299-44999318 | None:intergenic | 45.0% | |
! | ACGCAGCTTTTGAATATCCC+GGG | + | chr8.1:44998018-44998037 | None:intergenic | 45.0% |
! | GAAACTCCACCATGTCCTTT+TGG | - | chr8.1:44999290-44999309 | MS.gene34733:intron | 45.0% |
! | GACGCAGCTTTTGAATATCC+CGG | + | chr8.1:44998019-44998038 | None:intergenic | 45.0% |
! | TTTAGAACTGTGGTGTGAGG+TGG | + | chr8.1:44999760-44999779 | None:intergenic | 45.0% |
!! | ACGGATAGGTTAGCTTGTAG+CGG | - | chr8.1:44998313-44998332 | MS.gene34733:CDS | 45.0% |
!! | GCCGATAAGTTAGCTTGTAG+CGG | - | chr8.1:44998339-44998358 | MS.gene34733:CDS | 45.0% |
!!! | ATACGGAGGTTTTGGTTGAG+AGG | + | chr8.1:44997836-44997855 | None:intergenic | 45.0% |
AACAAGGTGGGGTCCATTAG+CGG | + | chr8.1:44998105-44998124 | None:intergenic | 50.0% | |
AGATTGCACCGTCAAGACTG+CGG | + | chr8.1:44999221-44999240 | None:intergenic | 50.0% | |
ATACCTGAGAGAGACGAGGT+TGG | + | chr8.1:44998201-44998220 | None:intergenic | 50.0% | |
ATGTGGCTCAATGCCGCTAA+TGG | - | chr8.1:44998089-44998108 | MS.gene34733:CDS | 50.0% | |
CGGGTGTTCGCAGTAACAAT+TGG | + | chr8.1:44997937-44997956 | None:intergenic | 50.0% | |
CGGTGAGAGACAGATCAACA+AGG | + | chr8.1:44998121-44998140 | None:intergenic | 50.0% | |
GACTCCTGTTATCCCGACAT+AGG | - | chr8.1:44999465-44999484 | MS.gene34733:CDS | 50.0% | |
GCTCTGCAAGTTGTCAAGGA+CGG | + | chr8.1:44999502-44999521 | None:intergenic | 50.0% | |
TTTGAATATCCCGGGACTCG+CGG | + | chr8.1:44998010-44998029 | None:intergenic | 50.0% | |
!! | CTTGTAGCGGATAGCCGATA+AGG | - | chr8.1:44998326-44998345 | MS.gene34733:CDS | 50.0% |
CCACGCTCTGCAAGTTGTCA+AGG | + | chr8.1:44999506-44999525 | None:intergenic | 55.0% | |
CCTTGACAACTTGCAGAGCG+TGG | - | chr8.1:44999503-44999522 | MS.gene34733:CDS | 55.0% | |
GCTGCGTCATTCGACGTCAA+AGG | - | chr8.1:44999635-44999654 | MS.gene34733:CDS | 55.0% | |
TGACAACTTGCAGAGCGTGG+TGG | - | chr8.1:44999506-44999525 | MS.gene34733:CDS | 55.0% | |
TTCAAACTCTTGGGGGGAGG+TGG | + | chr8.1:44999405-44999424 | None:intergenic | 55.0% | |
AAACTCTTGGGGGGAGGTGG+TGG | + | chr8.1:44999402-44999421 | None:intergenic | 60.0% | |
CTTCGACGACCGACGGATCA+CGG | - | chr8.1:44998771-44998790 | MS.gene34733:intron | 60.0% | |
GCACCAACCTCGTCTCTCTC+AGG | - | chr8.1:44998195-44998214 | MS.gene34733:CDS | 60.0% | |
GGTTCCACTTCGACGACCGA+CGG | - | chr8.1:44998764-44998783 | MS.gene34733:intron | 60.0% | |
TCGGTCGTCGAAGTGGAACC+AGG | + | chr8.1:44998764-44998783 | None:intergenic | 60.0% | |
TCTCTCTCGTTTCTCGCCGC+TGG | - | chr8.1:44997862-44997881 | MS.gene34733:intron | 60.0% | |
TGATCCGTCGGTCGTCGAAG+TGG | + | chr8.1:44998771-44998790 | None:intergenic | 60.0% | |
! | GGGAGGTGGTGGTACACCAT+CGG | + | chr8.1:44999391-44999410 | None:intergenic | 60.0% |
AATATCCCGGGACTCGCGGC+GGG | + | chr8.1:44998006-44998025 | None:intergenic | 65.0% | |
CACGGGGCAGCCAGAGAGAA+GGG | + | chr8.1:44999328-44999347 | None:intergenic | 65.0% | |
GAATATCCCGGGACTCGCGG+CGG | + | chr8.1:44998007-44998026 | None:intergenic | 65.0% | |
GCTTCCAGAGATGGCGCCAG+CGG | + | chr8.1:44997881-44997900 | None:intergenic | 65.0% | |
GCACGGGGCAGCCAGAGAGA+AGG | + | chr8.1:44999329-44999348 | None:intergenic | 70.0% | |
CTCGCCGCTGGCGCCATCTC+TGG | - | chr8.1:44997874-44997893 | MS.gene34733:intron | 75.0% | |
GGACTCGCGGCGGGCGAAGA+CGG | + | chr8.1:44997997-44998016 | None:intergenic | 75.0% | |
TCTTCGCCCGCCGCGAGTCC+CGG | - | chr8.1:44997997-44998016 | MS.gene34733:CDS | 75.0% | |
! | CTTCGCCCGCCGCGAGTCCC+GGG | - | chr8.1:44997998-44998017 | MS.gene34733:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 44997723 | 44999903 | 44997723 | ID=MS.gene34733 |
chr8.1 | mRNA | 44997723 | 44999903 | 44997723 | ID=MS.gene34733.t1;Parent=MS.gene34733 |
chr8.1 | exon | 44999410 | 44999903 | 44999410 | ID=MS.gene34733.t1.exon1;Parent=MS.gene34733.t1 |
chr8.1 | CDS | 44999410 | 44999903 | 44999410 | ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1 |
chr8.1 | exon | 44997970 | 44998402 | 44997970 | ID=MS.gene34733.t1.exon2;Parent=MS.gene34733.t1 |
chr8.1 | CDS | 44997970 | 44998402 | 44997970 | ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1 |
chr8.1 | exon | 44997723 | 44997872 | 44997723 | ID=MS.gene34733.t1.exon3;Parent=MS.gene34733.t1 |
chr8.1 | CDS | 44997723 | 44997872 | 44997723 | ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1 |
Gene Sequence |
Protein sequence |