AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34733


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34733.t1 MTR_4g050250 50.256 390 156 7 1 359 1 383 1.00e-113 337
MS.gene34733.t1 MTR_8g058965 51.482 371 149 6 12 359 4 366 2.30e-112 335
MS.gene34733.t1 MTR_8g469020 51.923 364 141 9 21 359 7 361 4.58e-108 324
MS.gene34733.t1 MTR_8g070950 53.151 365 144 11 1 359 1 344 5.32e-103 310
MS.gene34733.t1 MTR_8g062010 49.713 348 150 7 21 359 9 340 7.37e-97 295
MS.gene34733.t1 MTR_8g062080 48.563 348 155 8 21 359 23 355 3.61e-94 288
MS.gene34733.t1 MTR_8g467790 48.997 349 131 9 21 359 148 459 1.31e-87 273
MS.gene34733.t1 MTR_8g062310 47.059 340 153 7 21 359 25 338 2.72e-86 267
MS.gene34733.t1 MTR_8g062300 42.506 407 166 15 1 359 1 387 1.69e-79 251
MS.gene34733.t1 MTR_2g083840 42.480 379 183 11 1 359 1 364 1.05e-72 233
MS.gene34733.t1 MTR_8g468810 40.731 383 191 13 1 359 1 371 2.77e-70 224
MS.gene34733.t1 MTR_8g468810 40.731 383 191 13 1 359 1 371 2.42e-69 224
MS.gene34733.t1 MTR_8g062270 41.880 351 178 9 21 354 16 357 2.23e-67 219
MS.gene34733.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 8.41e-63 203
MS.gene34733.t1 MTR_8g445780 42.373 354 172 13 21 359 13 349 8.71e-63 206
MS.gene34733.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 1.57e-62 203
MS.gene34733.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 2.02e-62 203
MS.gene34733.t1 MTR_8g058970 39.175 388 193 13 7 359 6 385 9.97e-61 202
MS.gene34733.t1 MTR_5g092960 39.142 373 197 8 9 359 7 371 1.91e-59 197
MS.gene34733.t1 MTR_5g092960 39.142 373 197 8 9 359 7 371 6.44e-59 197
MS.gene34733.t1 MTR_4g032730 37.912 364 202 11 11 359 2 356 1.62e-54 186
MS.gene34733.t1 MTR_8g467800 39.674 368 188 11 10 359 8 359 4.69e-54 184
MS.gene34733.t1 MTR_8g468840 39.045 356 194 9 19 359 12 359 8.87e-52 178
MS.gene34733.t1 MTR_8g014260 37.731 379 200 15 1 359 1 363 8.96e-52 178
MS.gene34733.t1 MTR_8g468760 39.776 357 156 13 12 351 2 316 4.33e-51 176
MS.gene34733.t1 MTR_8g014160 42.435 271 130 9 21 273 41 303 1.33e-47 167
MS.gene34733.t1 MTR_8g467800 41.275 298 145 10 10 289 8 293 5.29e-44 155
MS.gene34733.t1 MTR_5g021550 50.625 160 71 5 7 164 9 162 1.07e-38 135
MS.gene34733.t1 MTR_8g077460 40.724 221 121 8 21 234 10 227 5.53e-31 121
MS.gene34733.t1 MTR_8g014290 44.079 152 77 4 21 165 10 160 1.08e-29 112
MS.gene34733.t1 MTR_4g024720 39.011 182 87 5 1 164 1 176 1.29e-26 105
MS.gene34733.t1 MTR_2g086020 45.270 148 65 3 47 189 1 137 2.80e-25 104
MS.gene34733.t1 MTR_7g115270 33.790 219 118 8 13 218 4 208 2.50e-21 94.7
MS.gene34733.t1 MTR_7g032380 34.314 204 107 10 14 208 4 189 5.57e-20 90.1
MS.gene34733.t1 MTR_7g056447 35.122 205 112 7 20 220 8 195 1.79e-19 87.8
MS.gene34733.t1 MTR_1g041245 35.859 198 98 9 21 208 11 189 2.21e-19 89.0
MS.gene34733.t1 MTR_3g107120 31.224 237 140 10 21 242 9 237 2.05e-18 86.3
MS.gene34733.t1 MTR_4g024710 35.321 218 103 8 165 359 58 260 2.48e-18 85.5
MS.gene34733.t1 MTR_5g008950 31.050 219 113 9 23 230 1 192 6.24e-18 84.7
MS.gene34733.t1 MTR_8g085430 32.353 204 104 9 21 208 11 196 6.35e-18 84.0
MS.gene34733.t1 MTR_5g084070 27.957 372 213 18 1 355 1 334 1.20e-17 84.0
MS.gene34733.t1 MTR_5g073420 32.273 220 133 10 11 225 2 210 1.32e-17 83.6
MS.gene34733.t1 MTR_3g107160 31.222 221 135 9 21 235 10 219 4.74e-17 82.0
MS.gene34733.t1 MTR_5g008920 32.632 190 108 8 23 208 14 187 5.99e-17 81.6
MS.gene34733.t1 MTR_3g108150 33.503 197 109 7 21 213 13 191 6.38e-17 81.6
MS.gene34733.t1 MTR_5g061680 32.018 228 127 12 11 225 2 214 8.63e-17 80.5
MS.gene34733.t1 MTR_3g040700 31.163 215 121 8 4 208 26 223 1.15e-16 81.3
MS.gene34733.t1 MTR_2g007450 33.953 215 113 10 21 215 16 221 1.35e-16 80.9
MS.gene34733.t1 MTR_7g007080 32.579 221 127 7 21 232 4 211 2.52e-16 79.7
MS.gene34733.t1 MTR_7g026500 34.673 199 117 7 21 213 14 205 6.69e-16 78.6
MS.gene34733.t1 MTR_8g014220 33.962 212 82 6 1 206 1 160 7.75e-16 74.7
MS.gene34733.t1 MTR_5g080710 26.870 361 224 15 9 355 26 360 2.99e-15 77.0
MS.gene34733.t1 MTR_1g108820 33.628 226 125 10 21 242 8 212 3.63e-15 76.3
MS.gene34733.t1 MTR_7g098510 30.242 248 111 12 1 216 1 218 4.36e-15 76.3
MS.gene34733.t1 MTR_1g108820 33.628 226 125 10 21 242 8 212 5.93e-15 75.5
MS.gene34733.t1 MTR_2g007500 35.385 195 94 8 21 208 14 183 7.53e-15 75.1
MS.gene34733.t1 MTR_4g056030 34.562 217 106 10 21 219 9 207 8.12e-15 75.9
MS.gene34733.t1 MTR_4g024770 56.522 69 25 2 1 69 8 71 8.92e-15 69.3
MS.gene34733.t1 MTR_7g056433 31.776 214 125 7 21 227 12 211 1.08e-14 75.1
MS.gene34733.t1 MTR_7g033990 30.588 255 115 11 21 243 11 235 2.25e-14 74.3
MS.gene34733.t1 MTR_3g107100 29.808 208 128 8 21 223 11 205 2.59e-14 73.9
MS.gene34733.t1 MTR_3g036250 31.313 198 111 8 20 208 4 185 4.92e-14 72.8
MS.gene34733.t1 MTR_1g038710 33.019 212 114 8 21 220 19 214 5.03e-14 73.2
MS.gene34733.t1 MTR_4g056040 33.473 239 109 10 21 219 9 237 1.06e-13 72.4
MS.gene34733.t1 MTR_7g098570 29.412 204 128 4 8 208 7 197 1.10e-13 72.4
MS.gene34733.t1 MTR_7g034115 32.850 207 108 8 17 212 7 193 1.76e-13 71.2
MS.gene34733.t1 MTR_5g083890 31.304 230 105 9 21 218 6 214 4.27e-13 70.5
MS.gene34733.t1 MTR_7g034110 32.663 199 105 8 21 208 11 191 6.12e-13 69.3
MS.gene34733.t1 MTR_7g075820 32.407 216 107 8 21 210 6 208 6.94e-13 69.7
MS.gene34733.t1 MTR_2g005990 32.093 215 123 9 21 221 6 211 8.67e-13 69.3
MS.gene34733.t1 MTR_4g024745 33.182 220 109 8 163 359 10 214 1.35e-12 67.8
MS.gene34733.t1 MTR_4g080590 29.808 208 130 6 9 213 11 205 2.27e-12 67.8
MS.gene34733.t1 MTR_3g467400 28.155 206 122 8 19 208 1 196 2.41e-12 67.8
MS.gene34733.t1 MTR_1089s0010 31.282 195 111 9 21 208 8 186 2.67e-12 67.8
MS.gene34733.t1 MTR_2g007400 30.144 209 128 8 19 215 10 212 3.05e-12 67.8
MS.gene34733.t1 MTR_7g088260 30.000 210 127 6 8 213 78 271 4.14e-12 67.4
MS.gene34733.t1 MTR_4g080590 29.808 208 130 6 9 213 11 205 4.17e-12 67.4
MS.gene34733.t1 MTR_5g045170 29.245 212 126 6 11 214 4 199 5.51e-12 67.0
MS.gene34733.t1 MTR_2g008310 29.353 201 120 6 21 215 2 186 5.56e-12 67.0
MS.gene34733.t1 MTR_5g039970 28.365 208 137 5 8 212 6 204 8.94e-12 65.9
MS.gene34733.t1 MTR_8g014180 58.333 60 20 2 1 60 1 55 8.98e-12 60.1
MS.gene34733.t1 MTR_4g092430 26.110 383 236 14 3 359 25 386 9.74e-12 66.2
MS.gene34733.t1 MTR_7g034090 27.354 223 131 7 21 213 4 225 1.17e-11 65.9
MS.gene34733.t1 MTR_7g056287 30.244 205 128 7 19 219 1 194 1.68e-11 65.5
MS.gene34733.t1 MTR_7g033915 28.365 208 116 6 21 223 11 190 1.72e-11 65.1
MS.gene34733.t1 MTR_5g039950 30.876 217 114 10 1 208 1 190 2.62e-11 65.1
MS.gene34733.t1 MTR_7g098480 28.436 211 132 5 1 208 1 195 2.77e-11 65.1
MS.gene34733.t1 MTR_3g023630 32.323 198 107 9 20 208 7 186 2.81e-11 64.7
MS.gene34733.t1 MTR_4g134150 30.208 192 109 6 21 208 14 184 3.65e-11 62.8
MS.gene34733.t1 MTR_5g058100 29.048 210 124 7 14 215 2 194 3.90e-11 64.3
MS.gene34733.t1 MTR_7g056277 30.542 203 126 7 21 219 259 450 4.36e-11 64.7
MS.gene34733.t1 MTR_1g492880 50.000 66 22 3 11 72 2 60 4.72e-11 59.7
MS.gene34733.t1 MTR_1g053025 30.542 203 119 8 21 212 2 193 4.76e-11 63.9
MS.gene34733.t1 MTR_1g492880 50.000 66 22 3 11 72 2 60 4.86e-11 59.3
MS.gene34733.t1 MTR_4g092430 32.609 184 103 7 3 182 25 191 5.44e-11 63.9
MS.gene34733.t1 MTR_6g018560 27.528 356 203 13 6 330 18 349 6.67e-11 63.5
MS.gene34733.t1 MTR_6g040270 31.088 193 110 9 23 208 10 186 6.85e-11 63.5
MS.gene34733.t1 MTR_7g033945 32.620 187 82 9 21 189 11 171 7.71e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34733.t1 AT1G06630 30.028 353 224 10 21 359 12 355 2.44e-26 108
MS.gene34733.t1 AT1G06630 30.028 353 224 10 21 359 12 355 2.44e-26 108
MS.gene34733.t1 AT1G06630 31.818 286 178 8 21 293 12 293 3.26e-26 106
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 21 361 4.71e-26 108
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 12 352 6.31e-26 107
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 12 352 6.31e-26 107
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 12 352 6.31e-26 107
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 12 352 6.31e-26 107
MS.gene34733.t1 AT1G06630 30.000 350 222 10 21 356 12 352 2.24e-25 107
MS.gene34733.t1 AT4G14103 29.492 295 159 11 21 291 8 277 1.17e-21 95.9
MS.gene34733.t1 AT4G14103 29.153 295 160 11 21 291 8 277 1.41e-21 95.1
MS.gene34733.t1 AT4G14103 29.153 295 160 11 21 291 8 277 1.41e-21 95.1
MS.gene34733.t1 AT4G14096 30.435 276 147 10 21 272 8 262 2.01e-21 95.5
MS.gene34733.t1 AT4G14096 30.435 276 147 10 21 272 8 262 2.01e-21 95.5
MS.gene34733.t1 AT4G10400 35.354 198 111 8 21 214 2 186 2.65e-20 91.7
MS.gene34733.t1 AT4G10400 35.354 198 111 8 21 214 2 186 2.65e-20 91.7
MS.gene34733.t1 AT4G10400 35.354 198 111 8 21 214 2 186 2.65e-20 91.7
MS.gene34733.t1 AT3G59200 31.863 204 122 6 16 212 2 195 3.19e-20 91.3
MS.gene34733.t1 AT3G59200 31.863 204 122 6 16 212 2 195 4.05e-20 92.0
MS.gene34733.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.56e-19 88.6
MS.gene34733.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.56e-19 88.6
MS.gene34733.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.63e-19 87.8
MS.gene34733.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.63e-19 87.8
MS.gene34733.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.63e-19 87.8
MS.gene34733.t1 AT1G16930 34.466 206 98 8 20 212 14 195 1.30e-18 87.0
MS.gene34733.t1 AT1G16930 34.466 206 98 8 20 212 14 195 1.30e-18 87.0
MS.gene34733.t1 AT1G16930 34.466 206 98 8 20 212 14 195 1.30e-18 87.0
MS.gene34733.t1 AT3G59170 32.636 239 124 10 16 223 2 234 3.12e-18 86.3
MS.gene34733.t1 AT4G00160 37.000 200 111 7 17 212 11 199 3.36e-18 85.9
MS.gene34733.t1 AT3G59230 31.553 206 117 7 21 212 12 207 6.09e-18 85.5
MS.gene34733.t1 AT3G59210 35.468 203 106 7 21 212 7 195 1.71e-17 84.0
MS.gene34733.t1 AT3G59210 35.468 203 106 7 21 212 7 195 1.71e-17 84.0
MS.gene34733.t1 AT3G59210 35.468 203 106 7 21 212 7 195 1.71e-17 84.0
MS.gene34733.t1 AT3G59210 35.468 203 106 7 21 212 7 195 1.71e-17 84.0
MS.gene34733.t1 AT3G59210 35.468 203 106 7 21 212 7 195 1.71e-17 84.0
MS.gene34733.t1 AT3G44810 33.498 203 111 7 23 213 9 199 1.89e-17 83.6
MS.gene34733.t1 AT1G69630 32.751 229 127 10 1 223 1 208 1.90e-17 83.6
MS.gene34733.t1 AT3G58920 27.500 400 193 18 21 357 2 367 2.27e-17 83.6
MS.gene34733.t1 AT3G26922 30.702 228 129 9 8 224 1 210 2.90e-17 81.6
MS.gene34733.t1 AT3G26922 30.702 228 129 9 8 224 1 210 2.90e-17 81.6
MS.gene34733.t1 AT1G78750 33.962 212 113 10 21 221 18 213 3.56e-17 82.8
MS.gene34733.t1 AT1G78750 33.962 212 113 10 21 221 18 213 3.56e-17 82.8
MS.gene34733.t1 AT1G64540 29.537 281 135 13 21 272 5 251 1.25e-16 81.3
MS.gene34733.t1 AT1G64540 29.537 281 135 13 21 272 5 251 1.25e-16 81.3
MS.gene34733.t1 AT3G44060 32.308 195 111 5 26 212 4 185 6.11e-16 79.0
MS.gene34733.t1 AT5G56690 32.487 197 117 7 23 213 4 190 7.08e-16 78.6
MS.gene34733.t1 AT5G22720 29.858 211 113 10 21 219 23 210 8.72e-16 79.0
MS.gene34733.t1 AT2G42720 33.166 199 120 7 21 213 2 193 1.06e-15 78.6
MS.gene34733.t1 AT5G53840 31.429 210 111 8 9 212 13 195 1.16e-15 78.2
MS.gene34733.t1 AT3G59240 29.126 206 127 6 15 212 2 196 1.20e-15 78.6
MS.gene34733.t1 AT5G41840 28.774 212 124 10 18 212 11 212 3.22e-15 77.4
MS.gene34733.t1 AT4G00320 30.693 202 118 9 21 208 13 206 3.36e-15 77.0
MS.gene34733.t1 AT4G13965 31.429 210 113 8 12 212 1 188 3.44e-15 76.6
MS.gene34733.t1 AT5G38390 31.658 199 112 7 21 215 2 180 3.90e-15 76.6
MS.gene34733.t1 AT3G59160 25.926 324 173 12 21 296 13 317 4.10e-15 76.6
MS.gene34733.t1 AT4G13960 31.156 199 118 6 21 212 2 188 4.49e-15 76.6
MS.gene34733.t1 AT4G13960 31.156 199 118 6 21 212 2 188 4.49e-15 76.6
MS.gene34733.t1 AT5G60610 33.838 198 109 8 21 214 2 181 5.46e-15 75.9
MS.gene34733.t1 AT5G60610 33.838 198 109 8 21 214 2 181 5.46e-15 75.9
MS.gene34733.t1 AT1G58310 29.565 230 120 9 21 223 8 222 5.79e-15 76.3
MS.gene34733.t1 AT5G41830 29.060 234 141 9 21 235 13 240 8.79e-15 75.9
MS.gene34733.t1 AT5G38396 27.426 237 146 8 21 241 2 228 9.11e-15 75.5
MS.gene34733.t1 AT4G15060 32.420 219 132 8 1 213 4 212 1.07e-14 75.5
MS.gene34733.t1 AT4G13985 29.293 198 133 5 21 215 19 212 3.18e-14 73.9
MS.gene34733.t1 AT4G15060 32.487 197 119 7 21 213 172 358 4.02e-14 73.9
MS.gene34733.t1 AT3G49150 30.653 199 120 7 21 212 16 203 4.63e-14 73.6
MS.gene34733.t1 AT4G26340 32.000 200 112 6 21 213 2 184 4.76e-14 73.2
MS.gene34733.t1 AT5G56560 28.319 226 143 6 23 244 7 217 5.50e-14 73.2
MS.gene34733.t1 AT3G59190 27.451 204 124 6 21 212 12 203 6.85e-14 72.8
MS.gene34733.t1 AT2G26030 26.685 371 214 16 21 356 4 351 7.08e-14 72.8
MS.gene34733.t1 AT3G52680 34.951 206 106 10 17 212 16 203 8.00e-14 72.4
MS.gene34733.t1 AT3G59190 27.451 204 124 6 21 212 12 203 9.31e-14 72.8
MS.gene34733.t1 AT2G26030 26.757 370 213 16 21 355 4 350 1.18e-13 72.0
MS.gene34733.t1 AT2G26030 26.757 370 213 16 21 355 4 350 1.18e-13 72.0
MS.gene34733.t1 AT5G56440 34.597 211 91 11 21 212 2 184 1.19e-13 72.0
MS.gene34733.t1 AT1G51370 31.443 194 104 7 21 208 19 189 1.37e-13 71.6
MS.gene34733.t1 AT1G51370 31.443 194 104 7 21 208 19 189 1.86e-13 71.6
MS.gene34733.t1 AT1G51370 31.443 194 104 7 21 208 19 189 1.94e-13 71.2
MS.gene34733.t1 AT3G03030 28.780 205 121 8 21 212 2 194 1.96e-13 70.9
MS.gene34733.t1 AT5G22610 28.800 250 150 9 1 237 1 235 2.36e-13 71.2
MS.gene34733.t1 AT3G03030 28.293 205 122 7 21 212 2 194 2.53e-13 71.2
MS.gene34733.t1 AT3G58820 29.747 158 94 5 21 170 2 150 2.75e-13 70.9
MS.gene34733.t1 AT5G56410 29.756 205 115 7 28 213 10 204 3.53e-13 70.9
MS.gene34733.t1 AT5G56400 29.817 218 128 7 1 212 16 214 3.55e-13 70.9
MS.gene34733.t1 AT5G38392 28.571 203 126 7 21 212 2 196 3.99e-13 68.2
MS.gene34733.t1 AT1G66310 30.332 211 123 8 7 212 7 198 4.63e-13 70.5
MS.gene34733.t1 AT5G56370 33.333 195 109 8 21 210 2 180 5.97e-13 69.3
MS.gene34733.t1 AT5G18780 32.828 198 108 9 21 212 11 189 7.48e-13 69.7
MS.gene34733.t1 AT5G18780 32.828 198 108 9 21 212 11 189 7.48e-13 69.7
MS.gene34733.t1 AT1G60400 30.542 203 111 7 21 212 14 197 8.15e-13 69.3
MS.gene34733.t1 AT5G56370 28.625 269 154 11 21 272 2 249 8.26e-13 69.7
MS.gene34733.t1 AT5G56370 28.625 269 154 11 21 272 2 249 8.26e-13 69.7
MS.gene34733.t1 AT5G18780 32.828 198 108 9 21 212 11 189 1.03e-12 68.9
MS.gene34733.t1 AT5G18780 32.828 198 108 9 21 212 11 189 1.03e-12 68.9
MS.gene34733.t1 AT5G56560 29.897 194 118 5 23 213 7 185 1.29e-12 69.3
MS.gene34733.t1 AT3G50710 26.316 361 213 13 21 359 2 331 1.60e-12 68.6
MS.gene34733.t1 AT4G00315 32.487 197 120 7 21 213 2 189 2.41e-12 68.2
MS.gene34733.t1 AT5G22610 29.680 219 132 8 1 212 1 204 2.50e-12 68.2
MS.gene34733.t1 AT1G56610 32.653 196 108 9 26 212 15 195 2.79e-12 68.2
MS.gene34733.t1 AT5G35995 31.658 199 111 7 21 212 5 185 2.87e-12 68.2
MS.gene34733.t1 AT5G35995 31.658 199 111 7 21 212 5 185 2.87e-12 68.2
MS.gene34733.t1 AT1G55030 29.778 225 118 9 15 224 3 202 3.23e-12 67.8
MS.gene34733.t1 AT5G56380 32.381 210 118 10 21 221 2 196 3.94e-12 67.4
MS.gene34733.t1 AT5G56380 32.381 210 118 10 21 221 2 196 3.94e-12 67.4
MS.gene34733.t1 AT1G55030 29.778 225 118 9 15 224 13 212 4.05e-12 67.4
MS.gene34733.t1 AT1G56610 32.653 196 108 9 26 212 78 258 5.75e-12 67.4
MS.gene34733.t1 AT3G59150 31.868 182 100 8 20 192 12 178 1.17e-11 66.2
MS.gene34733.t1 AT3G26930 33.491 212 111 8 21 224 21 210 1.75e-11 65.5
MS.gene34733.t1 AT1G13570 30.204 245 122 13 21 252 6 214 2.19e-11 65.1
MS.gene34733.t1 AT1G13570 30.204 245 122 13 21 252 6 214 2.19e-11 65.1
MS.gene34733.t1 AT3G28410 27.041 196 121 4 20 213 27 202 3.38e-11 64.7
MS.gene34733.t1 AT1G13570 30.204 245 122 13 21 252 6 214 3.52e-11 63.9
MS.gene34733.t1 AT1G05080 30.841 214 123 8 21 224 13 211 4.60e-11 64.3
MS.gene34733.t1 AT3G51530 31.746 189 112 6 21 208 30 202 6.00e-11 63.9
MS.gene34733.t1 AT5G53640 29.469 207 113 8 15 212 16 198 6.37e-11 62.0
MS.gene34733.t1 AT5G25860 31.100 209 111 9 21 208 12 208 8.19e-11 63.5
MS.gene34733.t1 AT1G66300 27.919 197 120 6 21 212 29 208 9.52e-11 63.2
MS.gene34733.t1 AT3G62440 26.794 209 126 5 21 212 2 200 9.53e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGATGATGACATGTTTC+TGG 0.246801 8.1:-44999552 MS.gene34733:CDS
GATTGTTGATACGGAGGTTT+TGG 0.266033 8.1:+44999763 None:intergenic
GAAACTCCACCATGTCCTTT+TGG 0.274770 8.1:-44998314 MS.gene34733:CDS
CTCGCCGCTGGCGCCATCTC+TGG 0.310072 8.1:-44999730 MS.gene34733:CDS
CTTCATATATATCTCCATTT+CGG 0.317442 8.1:+44998011 None:intergenic
ATTGCTAAATTTCAAACTCT+TGG 0.321121 8.1:+44998192 None:intergenic
TTGCTAAATTTCAAACTCTT+GGG 0.322765 8.1:+44998193 None:intergenic
TGATGTAAATTGCAAAGTTC+TGG 0.338388 8.1:+44997820 None:intergenic
GAGCAAAAGATTCGAGTTAA+AGG 0.347067 8.1:+44997777 None:intergenic
TCAATTGTTGCCCTTCTCTC+TGG 0.354482 8.1:-44998289 MS.gene34733:CDS
TCTTCGCCCGCCGCGAGTCC+CGG 0.362569 8.1:-44999607 MS.gene34733:CDS
AATTCCTATGTCGGGATAAC+AGG 0.364711 8.1:+44998135 None:intergenic
TCTTATAATTCAGAGCAATA+AGG 0.365060 8.1:-44997722 None:intergenic
TTCGGAGGTTGTAGAGAATA+GGG 0.396639 8.1:+44998029 None:intergenic
ATGTGGCTCAATGCCGCTAA+TGG 0.398356 8.1:-44999515 MS.gene34733:CDS
TCTCTCTCGTTTCTCGCCGC+TGG 0.398888 8.1:-44999742 MS.gene34733:CDS
GTGCAGTTGAAGAGAGAAGA+AGG 0.423600 8.1:+44999428 None:intergenic
CGGGTGTTCGCAGTAACAAT+TGG 0.430664 8.1:+44999670 None:intergenic
TTTCGGAGGTTGTAGAGAAT+AGG 0.434072 8.1:+44998028 None:intergenic
TTGAAACACCGCAGTCTTGA+CGG 0.437699 8.1:-44998394 MS.gene34733:intron
ATTCTCTACAACCTCCGAAA+TGG 0.442564 8.1:-44998025 MS.gene34733:CDS
CTTCAGTGATGGAAAATAAA+CGG 0.451697 8.1:+44998342 None:intergenic
TGAAGAGAGAAGAAGGGAAA+AGG 0.452425 8.1:+44999435 None:intergenic
TGGCTAATTGCATTGATATG+TGG 0.457305 8.1:-44999532 MS.gene34733:CDS
TTATAAGAACTTGAAGCATA+TGG 0.458855 8.1:+44997737 None:intergenic
CTTCGCCCGCCGCGAGTCCC+GGG 0.459241 8.1:-44999606 MS.gene34733:CDS
CACGGGGCAGCCAGAGAGAA+GGG 0.476976 8.1:+44998279 None:intergenic
CAACAAATTTACTTTCAGAT+GGG 0.478832 8.1:+44998053 None:intergenic
TCAACAAATTTACTTTCAGA+TGG 0.480545 8.1:+44998052 None:intergenic
AATATCCCGGGACTCGCGGC+GGG 0.480745 8.1:+44999601 None:intergenic
GGACTCGCGGCGGGCGAAGA+CGG 0.487568 8.1:+44999610 None:intergenic
GCCAATGTAATTCCTATGTC+GGG 0.493069 8.1:+44998127 None:intergenic
GGGCAACAATTGAGTCCAAA+AGG 0.494834 8.1:+44998299 None:intergenic
TGCTAAATTTCAAACTCTTG+GGG 0.496640 8.1:+44998194 None:intergenic
TGCAGTTGAAGAGAGAAGAA+GGG 0.509530 8.1:+44999429 None:intergenic
AACGAGAGAGATTGTTGATA+CGG 0.510527 8.1:+44999754 None:intergenic
GCACCAACCTCGTCTCTCTC+AGG 0.511577 8.1:-44999409 MS.gene34733:intron
GCACGGGGCAGCCAGAGAGA+AGG 0.511707 8.1:+44998278 None:intergenic
AACAAATTTACTTTCAGATG+GGG 0.514411 8.1:+44998054 None:intergenic
AACAAGGTGGGGTCCATTAG+CGG 0.520731 8.1:+44999502 None:intergenic
ATTGAAGATGCTTCCAGAGA+TGG 0.526620 8.1:+44999717 None:intergenic
CAAAAGCTGCGTCTCAATTG+TGG 0.529093 8.1:-44999578 MS.gene34733:CDS
ATAGCAAAAGTTTCGAGCAC+GGG 0.532840 8.1:+44998262 None:intergenic
GAACAAAACGACGTCGTCAT+CGG 0.535611 8.1:-44999845 MS.gene34733:CDS
GGCCAATGTAATTCCTATGT+CGG 0.551371 8.1:+44998126 None:intergenic
CATATATATCTCCATTTCGG+AGG 0.553563 8.1:+44998014 None:intergenic
GCTAAATTTCAAACTCTTGG+GGG 0.558203 8.1:+44998195 None:intergenic
GTAACAATTGGAGTCGGAGT+CGG 0.559467 8.1:+44999682 None:intergenic
ATGTGGCAGAGTATAGAGTC+TGG 0.559921 8.1:+44999803 None:intergenic
CTAAATTTCAAACTCTTGGG+GGG 0.561878 8.1:+44998196 None:intergenic
TGACGGTGCAATCTATATGA+AGG 0.562681 8.1:-44998377 MS.gene34733:CDS
AGTTTCAGCATCTTCAGTGA+TGG 0.564437 8.1:+44998331 None:intergenic
GCTTCCAGAGATGGCGCCAG+CGG 0.565504 8.1:+44999726 None:intergenic
TTTGAATATCCCGGGACTCG+CGG 0.566592 8.1:+44999597 None:intergenic
GGGAGGTGGTGGTACACCAT+CGG 0.567550 8.1:+44998216 None:intergenic
TTAGCAATAACAATTTCACT+TGG 0.568586 8.1:-44998177 MS.gene34733:CDS
CCACGCTCTGCAAGTTGTCA+AGG 0.570001 8.1:+44998101 None:intergenic
GCTGCGTCATTCGACGTCAA+AGG 0.575927 8.1:-44997969 MS.gene34733:intron
CAAAAGATTCGAGTTAAAGG+AGG 0.581028 8.1:+44997780 None:intergenic
GAGAGACAGATCAACAAGGT+GGG 0.594284 8.1:+44999490 None:intergenic
GCAGAGTATAGAGTCTGGTA+AGG 0.599401 8.1:+44999808 None:intergenic
CCTTGACAACTTGCAGAGCG+TGG 0.603355 8.1:-44998101 MS.gene34733:CDS
TCCCGACATAGGAATTACAT+TGG 0.608308 8.1:-44998128 MS.gene34733:CDS
TTCTGGATAATTTAGAACTG+TGG 0.609020 8.1:+44997837 None:intergenic
CAATTGAGTCCAAAAGGACA+TGG 0.611473 8.1:+44998305 None:intergenic
AATAGCAAAAGTTTCGAGCA+CGG 0.613146 8.1:+44998261 None:intergenic
GAATATCCCGGGACTCGCGG+CGG 0.615196 8.1:+44999600 None:intergenic
GAGAGAGATTGTTGATACGG+AGG 0.615530 8.1:+44999757 None:intergenic
GACTCCTGTTATCCCGACAT+AGG 0.616754 8.1:-44998139 MS.gene34733:CDS
AGAGACAGATCAACAAGGTG+GGG 0.620971 8.1:+44999491 None:intergenic
TTCGCAGTAACAATTGGAGT+CGG 0.623591 8.1:+44999676 None:intergenic
TTGAGAGGAATGAAAGGATG+TGG 0.635310 8.1:+44999786 None:intergenic
TAGCAAAAGTTTCGAGCACG+GGG 0.637509 8.1:+44998263 None:intergenic
GGTGTTAACGAATGATGCAA+AGG 0.638395 8.1:+44999631 None:intergenic
AAAAGATTCGAGTTAAAGGA+GGG 0.641164 8.1:+44997781 None:intergenic
GCTCTGCAAGTTGTCAAGGA+CGG 0.642771 8.1:+44998105 None:intergenic
ATACCTGAGAGAGACGAGGT+TGG 0.651019 8.1:+44999406 None:intergenic
TGACAACTTGCAGAGCGTGG+TGG 0.655980 8.1:-44998098 MS.gene34733:CDS
TACACCATCGGTAAAAGATG+TGG 0.661373 8.1:+44998228 None:intergenic
TTTAGAACTGTGGTGTGAGG+TGG 0.668163 8.1:+44997847 None:intergenic
AAGAAAGAGAAACATTTATG+CGG 0.668329 8.1:-44997991 MS.gene34733:CDS
TAATTTAGAACTGTGGTGTG+AGG 0.669445 8.1:+44997844 None:intergenic
TTGAGTCCAAAAGGACATGG+TGG 0.681011 8.1:+44998308 None:intergenic
CGGTGAGAGACAGATCAACA+AGG 0.685615 8.1:+44999486 None:intergenic
TGAGAGACAGATCAACAAGG+TGG 0.688449 8.1:+44999489 None:intergenic
TAAGATACCTGAGAGAGACG+AGG 0.719847 8.1:+44999402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCTATCTTATAATTATGAA+AGG - chr8.1:44998428-44998447 MS.gene34733:intron 20.0%
! AAAAACATCTAGCGAATATA+AGG + chr8.1:44998701-44998720 None:intergenic 25.0%
! AACAAATTTACTTTCAGATG+GGG + chr8.1:44999553-44999572 None:intergenic 25.0%
! AAGAAAGAGAAACATTTATG+CGG - chr8.1:44999613-44999632 MS.gene34733:CDS 25.0%
! AATTCACATTAATTGTATCC+TGG - chr8.1:44998743-44998762 MS.gene34733:intron 25.0%
! ATTGCTAAATTTCAAACTCT+TGG + chr8.1:44999415-44999434 None:intergenic 25.0%
! CAACAAATTTACTTTCAGAT+GGG + chr8.1:44999554-44999573 None:intergenic 25.0%
! CTTCATATATATCTCCATTT+CGG + chr8.1:44999596-44999615 None:intergenic 25.0%
! TAAAAGATGATAATCTACCT+AGG + chr8.1:44999068-44999087 None:intergenic 25.0%
! TCAACAAATTTACTTTCAGA+TGG + chr8.1:44999555-44999574 None:intergenic 25.0%
! TTAGCAATAACAATTTCACT+TGG - chr8.1:44999427-44999446 MS.gene34733:CDS 25.0%
! TTATAAGAACTTGAAGCATA+TGG + chr8.1:44999870-44999889 None:intergenic 25.0%
! TTGCTAAATTTCAAACTCTT+GGG + chr8.1:44999414-44999433 None:intergenic 25.0%
!! AACAAAGCATTAATTGTCTA+AGG + chr8.1:44998274-44998293 None:intergenic 25.0%
!! GGTAGATTATCATCTTTTAA+AGG - chr8.1:44999069-44999088 MS.gene34733:intron 25.0%
!! GTGAAGTTTTACTGTTATTA+TGG - chr8.1:44999657-44999676 MS.gene34733:CDS 25.0%
!! TAGACAATTAATGCTTTGTT+TGG - chr8.1:44998274-44998293 MS.gene34733:CDS 25.0%
!! TATATTCGCTAGATGTTTTT+CGG - chr8.1:44998701-44998720 MS.gene34733:intron 25.0%
!!! AGATTATCATCTTTTAAAGG+TGG - chr8.1:44999072-44999091 MS.gene34733:intron 25.0%
!!! TTTTTCAATTAAGACCACAT+GGG - chr8.1:44998484-44998503 MS.gene34733:intron 25.0%
!!! TTTTTTCAATTAAGACCACA+TGG - chr8.1:44998483-44998502 MS.gene34733:intron 25.0%
AGAAAATGACGTTTACCAAA+CGG - chr8.1:44998608-44998627 MS.gene34733:intron 30.0%
GTATCCATGACAGTTAAAAA+CGG + chr8.1:44998141-44998160 None:intergenic 30.0%
TAAATTATTACCGTTGTCAG+CGG - chr8.1:44999012-44999031 MS.gene34733:intron 30.0%
TGATGTAAATTGCAAAGTTC+TGG + chr8.1:44999787-44999806 None:intergenic 30.0%
TGCTAAATTTCAAACTCTTG+GGG + chr8.1:44999413-44999432 None:intergenic 30.0%
TTAATGTGAATTGTCTATGC+TGG + chr8.1:44998735-44998754 None:intergenic 30.0%
! AAAAGATTCGAGTTAAAGGA+GGG + chr8.1:44999826-44999845 None:intergenic 30.0%
! AATATAAGGTTTGTTTGGCA+AGG + chr8.1:44998687-44998706 None:intergenic 30.0%
! ACTGCATTACATGGTAATTT+TGG + chr8.1:44999124-44999143 None:intergenic 30.0%
! CTTCAGTGATGGAAAATAAA+CGG + chr8.1:44999265-44999284 None:intergenic 30.0%
! TAGCGAATATAAGGTTTGTT+TGG + chr8.1:44998692-44998711 None:intergenic 30.0%
! TTATTCCAATTTTACCCATG+TGG + chr8.1:44998501-44998520 None:intergenic 30.0%
! TTCTGGATAATTTAGAACTG+TGG + chr8.1:44999770-44999789 None:intergenic 30.0%
AACGAGAGAGATTGTTGATA+CGG + chr8.1:44997853-44997872 None:intergenic 35.0%
AATAGCAAAAGTTTCGAGCA+CGG + chr8.1:44999346-44999365 None:intergenic 35.0%
AGTGATTGACAACACATCAT+TGG + chr8.1:44998860-44998879 None:intergenic 35.0%
ATAACGAGAACTGCATTACA+TGG + chr8.1:44999133-44999152 None:intergenic 35.0%
CATATATATCTCCATTTCGG+AGG + chr8.1:44999593-44999612 None:intergenic 35.0%
CTAAATTTCAAACTCTTGGG+GGG + chr8.1:44999411-44999430 None:intergenic 35.0%
CTCTCAGGTATCTTAATCTA+TGG - chr8.1:44998210-44998229 MS.gene34733:CDS 35.0%
GCTAAATTTCAAACTCTTGG+GGG + chr8.1:44999412-44999431 None:intergenic 35.0%
GTATCTGTTGTCTATAACCT+AGG - chr8.1:44999048-44999067 MS.gene34733:intron 35.0%
TAAGACCACATGGGTAAAAT+TGG - chr8.1:44998493-44998512 MS.gene34733:intron 35.0%
TCCACTATAAGCTACCTTAT+CGG + chr8.1:44998369-44998388 None:intergenic 35.0%
TCGCAACTCATTAATTGATG+CGG - chr8.1:44998902-44998921 MS.gene34733:intron 35.0%
TGGCAAAAACTAGGGAATAA+CGG - chr8.1:44998294-44998313 MS.gene34733:CDS 35.0%
! CAAAAGATTCGAGTTAAAGG+AGG + chr8.1:44999827-44999846 None:intergenic 35.0%
! GAGCAAAAGATTCGAGTTAA+AGG + chr8.1:44999830-44999849 None:intergenic 35.0%
! GTTTACCAAACGGATCTTTT+CGG - chr8.1:44998618-44998637 MS.gene34733:intron 35.0%
! TAATTTAGAACTGTGGTGTG+AGG + chr8.1:44999763-44999782 None:intergenic 35.0%
! TGGCTAATTGCATTGATATG+TGG - chr8.1:44998072-44998091 MS.gene34733:CDS 35.0%
!! AAAACTAGGGAATAACGGAT+AGG - chr8.1:44998299-44998318 MS.gene34733:CDS 35.0%
!! CGTTTTGTTCTTCTGCTTTT+TGG + chr8.1:44997749-44997768 None:intergenic 35.0%
!! GCTTTGTTTGGCAAAAACTA+GGG - chr8.1:44998286-44998305 MS.gene34733:CDS 35.0%
!! TGCTTTGTTTGGCAAAAACT+AGG - chr8.1:44998285-44998304 MS.gene34733:CDS 35.0%
!! TTTTGGTTGAGAGGAATGAA+AGG + chr8.1:44997827-44997846 None:intergenic 35.0%
!!! AAGGTTTTGAAGAGTTGTTG+CGG + chr8.1:44997957-44997976 None:intergenic 35.0%
AATTCCTATGTCGGGATAAC+AGG + chr8.1:44999472-44999491 None:intergenic 40.0%
ACTCATTAATTGATGCGGCA+AGG - chr8.1:44998907-44998926 MS.gene34733:intron 40.0%
AGTTTCAGCATCTTCAGTGA+TGG + chr8.1:44999276-44999295 None:intergenic 40.0%
ATAGCAAAAGTTTCGAGCAC+GGG + chr8.1:44999345-44999364 None:intergenic 40.0%
ATTCTCTACAACCTCCGAAA+TGG - chr8.1:44999579-44999598 MS.gene34733:CDS 40.0%
ATTGAAGATGCTTCCAGAGA+TGG + chr8.1:44997890-44997909 None:intergenic 40.0%
ATTGATACTACCGCTGACAA+CGG + chr8.1:44999025-44999044 None:intergenic 40.0%
CAATTGAGTCCAAAAGGACA+TGG + chr8.1:44999302-44999321 None:intergenic 40.0%
GCCAATGTAATTCCTATGTC+GGG + chr8.1:44999480-44999499 None:intergenic 40.0%
GGCCAATGTAATTCCTATGT+CGG + chr8.1:44999481-44999500 None:intergenic 40.0%
GGTGTTAACGAATGATGCAA+AGG + chr8.1:44997976-44997995 None:intergenic 40.0%
TACACCATCGGTAAAAGATG+TGG + chr8.1:44999379-44999398 None:intergenic 40.0%
TCCCGACATAGGAATTACAT+TGG - chr8.1:44999476-44999495 MS.gene34733:CDS 40.0%
TCCGCTACAAGCTAACTTAT+CGG + chr8.1:44998343-44998362 None:intergenic 40.0%
TGAAGAGAGAAGAAGGGAAA+AGG + chr8.1:44998172-44998191 None:intergenic 40.0%
TGACGGTGCAATCTATATGA+AGG - chr8.1:44999227-44999246 MS.gene34733:intron 40.0%
TGCAGATGATGACATGTTTC+TGG - chr8.1:44998052-44998071 MS.gene34733:CDS 40.0%
TGCAGTTGAAGAGAGAAGAA+GGG + chr8.1:44998178-44998197 None:intergenic 40.0%
TTCGCAGTAACAATTGGAGT+CGG + chr8.1:44997931-44997950 None:intergenic 40.0%
TTCGGAGGTTGTAGAGAATA+GGG + chr8.1:44999578-44999597 None:intergenic 40.0%
TTGAGAGGAATGAAAGGATG+TGG + chr8.1:44997821-44997840 None:intergenic 40.0%
TTTCGGAGGTTGTAGAGAAT+AGG + chr8.1:44999579-44999598 None:intergenic 40.0%
TTTGACCGAAAAGATCCGTT+TGG + chr8.1:44998626-44998645 None:intergenic 40.0%
! AGCTGACTGAATTTGTTTCG+TGG - chr8.1:44998402-44998421 MS.gene34733:intron 40.0%
! ATCACCACATCTTTTACCGA+TGG - chr8.1:44999372-44999391 MS.gene34733:intron 40.0%
! GATTGTTGATACGGAGGTTT+TGG + chr8.1:44997844-44997863 None:intergenic 40.0%
! TTGTTGTTGTGTACAAGCAG+TGG - chr8.1:44999734-44999753 MS.gene34733:CDS 40.0%
!! AGGTAGCTTATAGTGGATAG+TGG - chr8.1:44998372-44998391 MS.gene34733:CDS 40.0%
!! CTCACCGTTTTTAACTGTCA+TGG - chr8.1:44998134-44998153 MS.gene34733:CDS 40.0%
!!! AGGTTTTGAAGAGTTGTTGC+GGG + chr8.1:44997956-44997975 None:intergenic 40.0%
!!! CTTCTGCTTTTTGGAGTTTG+AGG + chr8.1:44997740-44997759 None:intergenic 40.0%
AATTTCAAACTCTTGGGGGG+AGG + chr8.1:44999408-44999427 None:intergenic 45.0%
AGAGACAGATCAACAAGGTG+GGG + chr8.1:44998116-44998135 None:intergenic 45.0%
ATGTGGCAGAGTATAGAGTC+TGG + chr8.1:44997804-44997823 None:intergenic 45.0%
CAAAAGCTGCGTCTCAATTG+TGG - chr8.1:44998026-44998045 MS.gene34733:CDS 45.0%
GAACAAAACGACGTCGTCAT+CGG - chr8.1:44997759-44997778 MS.gene34733:CDS 45.0%
GAGAGACAGATCAACAAGGT+GGG + chr8.1:44998117-44998136 None:intergenic 45.0%
GAGAGAGATTGTTGATACGG+AGG + chr8.1:44997850-44997869 None:intergenic 45.0%
GCAGAGTATAGAGTCTGGTA+AGG + chr8.1:44997799-44997818 None:intergenic 45.0%
GCCGATAAGGTAGCTTATAG+TGG - chr8.1:44998365-44998384 MS.gene34733:CDS 45.0%
GGGCAACAATTGAGTCCAAA+AGG + chr8.1:44999308-44999327 None:intergenic 45.0%
GTAACAATTGGAGTCGGAGT+CGG + chr8.1:44997925-44997944 None:intergenic 45.0%
GTGCAGTTGAAGAGAGAAGA+AGG + chr8.1:44998179-44998198 None:intergenic 45.0%
TAACTACATCCGTGATCCGT+CGG + chr8.1:44998783-44998802 None:intergenic 45.0%
TAAGATACCTGAGAGAGACG+AGG + chr8.1:44998205-44998224 None:intergenic 45.0%
TAGCAAAAGTTTCGAGCACG+GGG + chr8.1:44999344-44999363 None:intergenic 45.0%
TCAATTGTTGCCCTTCTCTC+TGG - chr8.1:44999315-44999334 MS.gene34733:intron 45.0%
TGAGAGACAGATCAACAAGG+TGG + chr8.1:44998118-44998137 None:intergenic 45.0%
TTGAAACACCGCAGTCTTGA+CGG - chr8.1:44999210-44999229 MS.gene34733:intron 45.0%
TTGAGTCCAAAAGGACATGG+TGG + chr8.1:44999299-44999318 None:intergenic 45.0%
! ACGCAGCTTTTGAATATCCC+GGG + chr8.1:44998018-44998037 None:intergenic 45.0%
! GAAACTCCACCATGTCCTTT+TGG - chr8.1:44999290-44999309 MS.gene34733:intron 45.0%
! GACGCAGCTTTTGAATATCC+CGG + chr8.1:44998019-44998038 None:intergenic 45.0%
! TTTAGAACTGTGGTGTGAGG+TGG + chr8.1:44999760-44999779 None:intergenic 45.0%
!! ACGGATAGGTTAGCTTGTAG+CGG - chr8.1:44998313-44998332 MS.gene34733:CDS 45.0%
!! GCCGATAAGTTAGCTTGTAG+CGG - chr8.1:44998339-44998358 MS.gene34733:CDS 45.0%
!!! ATACGGAGGTTTTGGTTGAG+AGG + chr8.1:44997836-44997855 None:intergenic 45.0%
AACAAGGTGGGGTCCATTAG+CGG + chr8.1:44998105-44998124 None:intergenic 50.0%
AGATTGCACCGTCAAGACTG+CGG + chr8.1:44999221-44999240 None:intergenic 50.0%
ATACCTGAGAGAGACGAGGT+TGG + chr8.1:44998201-44998220 None:intergenic 50.0%
ATGTGGCTCAATGCCGCTAA+TGG - chr8.1:44998089-44998108 MS.gene34733:CDS 50.0%
CGGGTGTTCGCAGTAACAAT+TGG + chr8.1:44997937-44997956 None:intergenic 50.0%
CGGTGAGAGACAGATCAACA+AGG + chr8.1:44998121-44998140 None:intergenic 50.0%
GACTCCTGTTATCCCGACAT+AGG - chr8.1:44999465-44999484 MS.gene34733:CDS 50.0%
GCTCTGCAAGTTGTCAAGGA+CGG + chr8.1:44999502-44999521 None:intergenic 50.0%
TTTGAATATCCCGGGACTCG+CGG + chr8.1:44998010-44998029 None:intergenic 50.0%
!! CTTGTAGCGGATAGCCGATA+AGG - chr8.1:44998326-44998345 MS.gene34733:CDS 50.0%
CCACGCTCTGCAAGTTGTCA+AGG + chr8.1:44999506-44999525 None:intergenic 55.0%
CCTTGACAACTTGCAGAGCG+TGG - chr8.1:44999503-44999522 MS.gene34733:CDS 55.0%
GCTGCGTCATTCGACGTCAA+AGG - chr8.1:44999635-44999654 MS.gene34733:CDS 55.0%
TGACAACTTGCAGAGCGTGG+TGG - chr8.1:44999506-44999525 MS.gene34733:CDS 55.0%
TTCAAACTCTTGGGGGGAGG+TGG + chr8.1:44999405-44999424 None:intergenic 55.0%
AAACTCTTGGGGGGAGGTGG+TGG + chr8.1:44999402-44999421 None:intergenic 60.0%
CTTCGACGACCGACGGATCA+CGG - chr8.1:44998771-44998790 MS.gene34733:intron 60.0%
GCACCAACCTCGTCTCTCTC+AGG - chr8.1:44998195-44998214 MS.gene34733:CDS 60.0%
GGTTCCACTTCGACGACCGA+CGG - chr8.1:44998764-44998783 MS.gene34733:intron 60.0%
TCGGTCGTCGAAGTGGAACC+AGG + chr8.1:44998764-44998783 None:intergenic 60.0%
TCTCTCTCGTTTCTCGCCGC+TGG - chr8.1:44997862-44997881 MS.gene34733:intron 60.0%
TGATCCGTCGGTCGTCGAAG+TGG + chr8.1:44998771-44998790 None:intergenic 60.0%
! GGGAGGTGGTGGTACACCAT+CGG + chr8.1:44999391-44999410 None:intergenic 60.0%
AATATCCCGGGACTCGCGGC+GGG + chr8.1:44998006-44998025 None:intergenic 65.0%
CACGGGGCAGCCAGAGAGAA+GGG + chr8.1:44999328-44999347 None:intergenic 65.0%
GAATATCCCGGGACTCGCGG+CGG + chr8.1:44998007-44998026 None:intergenic 65.0%
GCTTCCAGAGATGGCGCCAG+CGG + chr8.1:44997881-44997900 None:intergenic 65.0%
GCACGGGGCAGCCAGAGAGA+AGG + chr8.1:44999329-44999348 None:intergenic 70.0%
CTCGCCGCTGGCGCCATCTC+TGG - chr8.1:44997874-44997893 MS.gene34733:intron 75.0%
GGACTCGCGGCGGGCGAAGA+CGG + chr8.1:44997997-44998016 None:intergenic 75.0%
TCTTCGCCCGCCGCGAGTCC+CGG - chr8.1:44997997-44998016 MS.gene34733:CDS 75.0%
! CTTCGCCCGCCGCGAGTCCC+GGG - chr8.1:44997998-44998017 MS.gene34733:CDS 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 44997723 44999903 44997723 ID=MS.gene34733
chr8.1 mRNA 44997723 44999903 44997723 ID=MS.gene34733.t1;Parent=MS.gene34733
chr8.1 exon 44999410 44999903 44999410 ID=MS.gene34733.t1.exon1;Parent=MS.gene34733.t1
chr8.1 CDS 44999410 44999903 44999410 ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1
chr8.1 exon 44997970 44998402 44997970 ID=MS.gene34733.t1.exon2;Parent=MS.gene34733.t1
chr8.1 CDS 44997970 44998402 44997970 ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1
chr8.1 exon 44997723 44997872 44997723 ID=MS.gene34733.t1.exon3;Parent=MS.gene34733.t1
chr8.1 CDS 44997723 44997872 44997723 ID=cds.MS.gene34733.t1;Parent=MS.gene34733.t1
Gene Sequence

>MS.gene34733

ATGGCGGAGTCAATCCTCAAACTCCAAAAAGCAGAAGAACAAAACGACGTCGTCATCGGTGATATCATAAGCACCTTACCAGACTCTATACTCTGCCACATCCTTTCATTCCTCTCAACCAAAACCTCCGTATCAACAATCTCTCTCGTTTCTCGCCGCTGGCGCCATCTCTGGAAGCATCTTCAATCATTCAACTTCTCCGACTCCGACTCCAATTGTTACTGCGAACACCCGCAACAACTCTTCAAAACCTTTGCATCATTCGTTAACACCGTCTTCGCCCGCCGCGAGTCCCGGGATATTCAAAAGCTGCGTCTCAATTGTGGCATTGCAGATGATGACATGTTTCTGGCTAATTGCATTGATATGTGGCTCAATGCCGCTAATGGACCCCACCTTGTTGATCTGTCTCTCACCGTTTTTAACTGTCATGGATACACTAACTTCCTTTTCCCTTCTTCTCTCTTCAACTGCACCAACCTCGTCTCTCTCAGGTATCTTAATCTATGGCTTATATCGTACTAGATATTTTTTTTTATCACTATCTACCTTAGACAATTAATGCTTTGTTTGGCAAAAACTAGGGAATAACGGATAGGTTAGCTTGTAGCGGATAGCCGATAAGTTAGCTTGTAGCGGATAGCCGATAAGGTAGCTTATAGTGGATAGTGGATATGTTAGCTGACTGAATTTGTTTCGTGGTTGAGCTATCTTATAATTATGAAAGGACATAAATAAGATATATTTAATTAATATTTAATTTTTTCAATTAAGACCACATGGGTAAAATTGGAATAAAATAAGACATAAGTTTAAGCTATAAGCTAATTCAAGTAGCTTATCAAAAAATGTTGTAAGCTAGTAAAAATAAGACATAAGTTCATGAGAAAATGACGTTTACCAAACGGATCTTTTCGGTCAAATAAGCTTATAAGACATAAGCTATATGCTGAAAAAAGTGCCTTGCCAAACAAACCTTATATTCGCTAGATGTTTTTCGGATCACTATCCAGCATAGACAATTCACATTAATTGTATCCTGGTTCCACTTCGACGACCGACGGATCACGGATGTAGTTACACATTCAAATATGAGTTTAATTTATATAGTGTAGAAAAGTCTTACACATACATCCAATGATGTGTTGTCAATCACTTATTGAATTAAAGACTTGTTTGTCGCAACTCATTAATTGATGCGGCAAGGCAACACATAATTTGATGCATGTGTAAAACATTTGTGCGTTAACAGTGTATATAAATTAAACTTTTCAAATATTTCATTTTATTAAATTATTACCGTTGTCAGCGGTAGTATCAATATTGTATCTGTTGTCTATAACCTAGGTAGATTATCATCTTTTAAAGGTGGAGATGAAAAGTAAAATCAGTAATATACCAAAATTACCATGTAATGCAGTTCTCGTTATATTTTTAATTGACATGTAAAATTTTTTAGAATGCTTATTTATATAATAGCATATCTTTTGAAACACCGCAGTCTTGACGGTGCAATCTATATGAAGGTTCAAAATTCTTCCGTTTATTTTCCATCACTGAAGATGCTGAAACTCCACCATGTCCTTTTGGACTCAATTGTTGCCCTTCTCTCTGGCTGCCCCGTGCTCGAAACTTTTGCTATTGACTTTATCACCACATCTTTTACCGATGGTGTACCACCACCTCCCCCCAAGAGTTTGAAATTTAGCAATAACAATTTCACTTGGACTTACATTGAAGTAGACTCCTGTTATCCCGACATAGGAATTACATTGGCCGTCCTTGACAACTTGCAGAGCGTGGTGGAATCATATCTTGACGTCTTTTCCCCATCTGAAAGTAAATTTGTTGACCCTATTCTCTACAACCTCCGAAATGGAGATATATATGAAGAAAGAGAAACATTTATGCGGCTGCGTCATTCGACGTCAAAGGTGAAGTTTTACTGTTATTATGGTTTATAGTTTATATATATGTATGTAGTTTTATTATAATATTGAATCATCACTTGTTGTTGTTGTGTACAAGCAGTGGCCACCTCACACCACAGTTCTAAATTATCCAGAACTTTGCAATTTACATCATCTAAAGTTGATTCTACCCTCCTTTAACTCGAATCTTTTGCTCAACGTGCTTGAGAAATGCCATATGCTTCAAGTTCTTATAATTCAGAGCAATAAG

Protein sequence

>MS.gene34733.t1

MAESILKLQKAEEQNDVVIGDIISTLPDSILCHILSFLSTKTSVSTISLVSRRWRHLWKHLQSFNFSDSDSNCYCEHPQQLFKTFASFVNTVFARRESRDIQKLRLNCGIADDDMFLANCIDMWLNAANGPHLVDLSLTVFNCHGYTNFLFPSSLFNCTNLVSLSLDGAIYMKVQNSSVYFPSLKMLKLHHVLLDSIVALLSGCPVLETFAIDFITTSFTDGVPPPPPKSLKFSNNNFTWTYIEVDSCYPDIGITLAVLDNLQSVVESYLDVFSPSESKFVDPILYNLRNGDIYEERETFMRLRHSTSKWPPHTTVLNYPELCNLHHLKLILPSFNSNLLLNVLEKCHMLQVLIIQSNK