AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022912


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022912.t1 MTR_7g056420 75.304 247 35 2 1 246 1 222 4.77e-113 351
MS.gene022912.t1 MTR_7g056430 75.304 247 35 2 1 246 1 222 2.36e-112 350
MS.gene022912.t1 MTR_7g115270 53.614 332 92 5 4 273 7 338 2.45e-101 302
MS.gene022912.t1 MTR_7g056433 45.732 328 113 5 3 273 6 325 1.84e-77 241
MS.gene022912.t1 MTR_7g056447 58.824 204 80 2 1 203 1 201 9.58e-74 228
MS.gene022912.t1 MTR_7g032380 42.810 306 145 10 4 288 6 302 2.35e-61 198
MS.gene022912.t1 MTR_5g013500 39.818 329 113 8 1 273 1 300 8.66e-60 194
MS.gene022912.t1 MTR_8g085430 42.177 294 130 10 7 288 9 274 6.90e-58 189
MS.gene022912.t1 MTR_1g041245 44.141 256 127 5 4 254 6 250 2.28e-56 186
MS.gene022912.t1 MTR_3g040700 38.835 309 147 6 4 273 38 343 5.59e-52 176
MS.gene022912.t1 MTR_3g036250 37.931 319 149 7 9 287 5 314 1.52e-51 173
MS.gene022912.t1 MTR_7g032370 39.934 303 139 10 21 283 2 301 5.18e-50 169
MS.gene022912.t1 MTR_3g108150 44.796 221 107 5 4 220 8 217 5.58e-48 164
MS.gene022912.t1 MTR_7g033915 36.391 327 125 10 4 275 6 304 7.19e-47 161
MS.gene022912.t1 MTR_7g033990 37.888 322 145 7 4 275 6 322 1.34e-46 162
MS.gene022912.t1 MTR_7g088260 46.154 221 104 4 4 220 86 295 1.51e-46 162
MS.gene022912.t1 MTR_7g098510 36.991 319 144 7 6 273 15 327 1.35e-45 158
MS.gene022912.t1 MTR_7g098480 38.050 318 140 8 6 273 15 325 4.95e-45 159
MS.gene022912.t1 MTR_7g033945 52.381 168 69 4 4 162 6 171 2.40e-44 149
MS.gene022912.t1 MTR_3g023630 34.675 323 145 9 5 273 4 314 3.02e-44 154
MS.gene022912.t1 MTR_7g034115 36.119 335 157 10 4 290 6 331 5.23e-44 154
MS.gene022912.t1 MTR_0492s0020 43.578 218 113 4 4 221 81 288 4.77e-43 152
MS.gene022912.t1 MTR_0492s0020 62.000 50 19 0 8 57 11 60 4.18e-13 69.3
MS.gene022912.t1 MTR_0543s0010 43.578 218 113 4 4 221 81 288 8.74e-43 152
MS.gene022912.t1 MTR_0543s0010 62.000 50 19 0 8 57 11 60 4.54e-13 69.3
MS.gene022912.t1 MTR_7g114710 38.255 298 154 9 4 273 8 303 1.14e-42 150
MS.gene022912.t1 MTR_7g098570 35.714 322 138 8 9 273 20 329 5.43e-42 150
MS.gene022912.t1 MTR_4g134150 46.316 190 87 7 5 189 10 189 6.36e-42 144
MS.gene022912.t1 MTR_7g056417 59.848 132 50 2 118 246 1 132 7.81e-42 142
MS.gene022912.t1 MTR_3g467400 35.987 314 139 11 9 273 3 303 1.05e-41 147
MS.gene022912.t1 MTR_7g034110 38.112 286 155 7 4 275 6 283 1.14e-41 147
MS.gene022912.t1 MTR_3g105060 32.907 313 159 7 4 273 9 313 8.02e-41 145
MS.gene022912.t1 MTR_3g108560 43.850 187 100 2 8 194 19 200 2.76e-40 142
MS.gene022912.t1 MTR_3g108560 33.538 325 161 8 8 283 19 337 2.98e-40 144
MS.gene022912.t1 MTR_3g109982 44.385 187 99 3 4 188 8 191 8.34e-39 145
MS.gene022912.t1 MTR_3g110010 44.149 188 100 3 4 189 8 192 1.09e-38 144
MS.gene022912.t1 MTR_3g087260 42.009 219 103 6 8 221 11 210 1.17e-37 139
MS.gene022912.t1 MTR_3g087260 38.710 124 64 4 106 224 181 297 3.09e-11 63.9
MS.gene022912.t1 MTR_7g033940 57.273 110 47 0 11 120 96 205 1.52e-37 133
MS.gene022912.t1 MTR_5g008920 32.927 328 160 9 1 275 1 321 3.08e-36 134
MS.gene022912.t1 MTR_5g012840 37.063 286 130 12 27 287 4 264 7.16e-36 131
MS.gene022912.t1 MTR_3g082890 34.242 330 149 8 9 273 97 423 2.02e-34 130
MS.gene022912.t1 MTR_3g082890 40.435 230 119 4 9 223 17 243 2.57e-34 129
MS.gene022912.t1 MTR_1g107385 38.683 243 127 7 4 225 27 268 1.42e-33 127
MS.gene022912.t1 MTR_5g008950 29.467 319 155 7 11 274 1 304 1.03e-32 124
MS.gene022912.t1 MTR_5g058100 37.500 224 129 5 1 218 1 219 2.35e-32 123
MS.gene022912.t1 MTR_7g007080 33.739 329 145 9 8 273 3 321 2.74e-32 123
MS.gene022912.t1 MTR_5g073420 36.652 221 121 6 9 221 11 220 5.28e-32 122
MS.gene022912.t1 MTR_2g007450 30.168 358 161 11 1 273 8 361 4.65e-31 120
MS.gene022912.t1 MTR_5g083890 33.628 339 150 12 8 273 5 341 5.99e-31 121
MS.gene022912.t1 MTR_3g107100 31.343 335 166 10 8 288 10 334 1.01e-30 119
MS.gene022912.t1 MTR_6g011460 38.739 222 120 7 9 222 46 259 3.25e-29 115
MS.gene022912.t1 MTR_7g056287 35.294 221 129 6 8 221 2 215 1.24e-28 113
MS.gene022912.t1 MTR_3g107120 33.041 342 151 15 1 273 1 333 3.73e-28 112
MS.gene022912.t1 MTR_2g005990 30.659 349 173 10 9 293 6 349 7.53e-28 111
MS.gene022912.t1 MTR_5g061680 36.818 220 128 6 9 222 11 225 1.42e-27 109
MS.gene022912.t1 MTR_1089s0010 39.572 187 102 6 9 188 8 190 2.03e-27 110
MS.gene022912.t1 MTR_7g056277 34.842 221 130 6 8 221 258 471 2.50e-27 111
MS.gene022912.t1 MTR_5g045510 30.312 320 171 10 7 283 10 320 3.17e-27 109
MS.gene022912.t1 MTR_7g075820 34.404 218 105 7 1 188 1 210 3.52e-27 109
MS.gene022912.t1 MTR_7g060470 34.328 268 144 9 8 250 2 262 4.85e-27 108
MS.gene022912.t1 MTR_2g008320 30.395 329 178 7 9 287 52 379 2.32e-26 107
MS.gene022912.t1 MTR_4g039440 36.937 222 132 5 9 225 34 252 2.92e-26 107
MS.gene022912.t1 MTR_5g045170 41.081 185 101 4 11 189 16 198 3.31e-26 107
MS.gene022912.t1 MTR_7g026500 29.641 334 150 12 9 272 14 332 4.95e-26 106
MS.gene022912.t1 MTR_6g022500 36.607 224 125 10 9 223 101 316 7.22e-26 106
MS.gene022912.t1 MTR_1g108820 29.063 320 167 9 9 273 8 322 1.10e-25 105
MS.gene022912.t1 MTR_1g108820 33.071 254 152 7 9 249 8 256 1.52e-25 104
MS.gene022912.t1 MTR_3g107160 31.385 325 158 12 9 275 10 327 1.62e-25 104
MS.gene022912.t1 MTR_2g007400 31.751 337 161 12 4 273 7 341 2.61e-25 104
MS.gene022912.t1 MTR_2g008310 31.447 318 156 9 9 273 2 310 4.23e-25 103
MS.gene022912.t1 MTR_1g085120 35.938 192 115 6 8 193 178 367 1.28e-24 103
MS.gene022912.t1 MTR_7g034120 33.077 260 107 10 73 275 2 251 1.49e-24 100
MS.gene022912.t1 MTR_1g085120 35.938 192 115 6 8 193 91 280 1.82e-24 102
MS.gene022912.t1 MTR_1g085120 35.938 192 115 6 8 193 166 355 2.02e-24 103
MS.gene022912.t1 MTR_1g095750 52.000 100 46 1 4 101 41 140 3.18e-24 95.9
MS.gene022912.t1 MTR_3g114200 44.118 136 71 3 9 140 19 153 8.80e-24 95.1
MS.gene022912.t1 MTR_5g058000 36.264 182 110 3 9 186 8 187 1.02e-23 99.8
MS.gene022912.t1 MTR_2g007500 28.701 331 166 8 1 273 6 324 2.20e-23 98.2
MS.gene022912.t1 MTR_1g066830 35.789 190 111 6 6 188 5 190 3.71e-23 98.2
MS.gene022912.t1 MTR_8g058965 35.122 205 107 6 9 188 13 216 6.75e-23 98.2
MS.gene022912.t1 MTR_0009s0080 28.286 350 181 13 1 283 2 348 1.21e-22 97.1
MS.gene022912.t1 MTR_7g034090 29.617 287 147 11 8 273 3 255 1.26e-22 97.1
MS.gene022912.t1 MTR_6g040270 36.058 208 120 7 11 212 10 210 1.55e-22 96.3
MS.gene022912.t1 MTR_3g095600 36.649 191 92 6 9 192 4 172 2.90e-22 94.4
MS.gene022912.t1 MTR_7g098590 49.524 105 47 2 6 106 15 117 4.02e-22 90.1
MS.gene022912.t1 MTR_5g007410 34.404 218 129 6 11 220 28 239 1.46e-21 94.4
MS.gene022912.t1 MTR_6g045333 35.841 226 134 7 2 220 54 275 2.05e-21 94.0
MS.gene022912.t1 MTR_5g065100 29.642 307 168 11 2 276 3 293 3.01e-21 93.2
MS.gene022912.t1 MTR_7g055943 32.567 261 151 9 6 249 37 289 3.12e-21 93.2
MS.gene022912.t1 MTR_2g020170 49.123 114 54 3 9 119 22 134 3.48e-21 87.8
MS.gene022912.t1 MTR_5g073370 27.358 318 173 6 9 273 5 317 1.01e-20 91.3
MS.gene022912.t1 MTR_8g062310 35.263 190 99 6 9 187 25 201 1.18e-20 91.7
MS.gene022912.t1 MTR_6g044572 27.640 322 172 10 9 273 2 319 1.48e-20 90.9
MS.gene022912.t1 MTR_4g098590 36.082 194 107 6 11 188 1 193 2.29e-20 90.1
MS.gene022912.t1 MTR_6g044560 27.640 322 172 10 9 273 178 495 3.16e-20 90.9
MS.gene022912.t1 MTR_8g070950 35.751 193 103 8 8 187 14 198 3.47e-20 90.5
MS.gene022912.t1 MTR_1g108800 29.836 305 137 10 9 271 8 277 1.34e-19 87.8
MS.gene022912.t1 MTR_3g071850 33.790 219 134 6 9 220 24 238 1.38e-19 89.4
MS.gene022912.t1 MTR_5g039490 29.355 310 165 12 6 274 17 313 8.91e-19 85.9
MS.gene022912.t1 MTR_5g058350 34.637 179 94 4 9 187 8 163 9.99e-19 82.0
MS.gene022912.t1 MTR_5g061410 30.688 189 104 4 5 189 1 166 1.35e-18 84.0
MS.gene022912.t1 MTR_6g022360 37.696 191 90 7 9 189 43 214 1.49e-18 85.5
MS.gene022912.t1 MTR_3g026920 30.400 250 124 7 4 222 14 244 2.27e-18 84.7
MS.gene022912.t1 MTR_8g062080 33.000 200 117 8 1 187 15 210 3.65e-18 84.3
MS.gene022912.t1 MTR_8g445780 34.184 196 108 6 6 187 10 198 4.04e-18 84.0
MS.gene022912.t1 MTR_7g068570 31.429 140 91 3 5 140 1 139 4.65e-18 80.5
MS.gene022912.t1 MTR_5g031970 36.413 184 100 5 9 188 16 186 5.07e-18 83.6
MS.gene022912.t1 MTR_3g095640 37.107 159 87 6 9 155 18 175 5.26e-18 80.1
MS.gene022912.t1 MTR_3g099830 33.649 211 124 4 4 210 7 205 8.41e-18 82.8
MS.gene022912.t1 MTR_8g014160 35.323 201 109 7 6 187 38 236 1.07e-17 83.2
MS.gene022912.t1 MTR_8g467790 31.658 199 110 7 9 188 148 339 1.88e-17 82.4
MS.gene022912.t1 MTR_5g084070 33.871 186 110 6 9 189 13 190 2.04e-17 82.4
MS.gene022912.t1 MTR_7g083740 26.453 344 148 10 9 290 17 317 2.10e-17 81.6
MS.gene022912.t1 MTR_7g007340 29.552 335 154 13 3 288 5 306 2.66e-17 81.6
MS.gene022912.t1 MTR_5g073340 33.516 182 96 4 9 189 8 165 4.32e-17 80.1
MS.gene022912.t1 MTR_6g022390 38.525 122 63 3 9 118 5 126 2.50e-16 75.1
MS.gene022912.t1 MTR_7g056020 32.287 223 124 6 3 221 10 209 3.38e-16 79.0
MS.gene022912.t1 MTR_5g063950 32.973 185 91 6 9 186 8 166 3.95e-16 78.2
MS.gene022912.t1 MTR_8g467800 35.450 189 110 6 8 187 19 204 5.06e-16 77.4
MS.gene022912.t1 MTR_2g007360 34.359 195 88 7 4 187 7 172 5.46e-16 77.8
MS.gene022912.t1 MTR_5g087940 40.299 134 74 2 7 139 24 152 7.43e-16 77.4
MS.gene022912.t1 MTR_7g023310 29.032 217 129 7 8 212 25 228 8.46e-16 77.4
MS.gene022912.t1 MTR_4g050250 29.302 215 110 7 9 188 21 228 9.63e-16 77.4
MS.gene022912.t1 MTR_8g467800 35.450 189 110 6 8 187 19 204 1.22e-15 77.0
MS.gene022912.t1 MTR_5g039470 34.731 167 100 5 26 187 2 164 1.67e-15 75.9
MS.gene022912.t1 MTR_2g036470 33.333 189 116 5 6 186 11 197 1.76e-15 76.3
MS.gene022912.t1 MTR_8g469020 28.636 220 115 9 1 187 1 211 1.85e-15 76.6
MS.gene022912.t1 MTR_4g050930 39.706 136 73 5 8 139 28 158 2.21e-15 76.3
MS.gene022912.t1 MTR_1g067190 35.075 134 84 2 7 139 13 144 2.80e-15 75.5
MS.gene022912.t1 MTR_4g050930 39.706 136 73 5 8 139 28 158 3.49e-15 75.9
MS.gene022912.t1 MTR_2g099980 31.447 159 98 3 4 156 33 186 5.05e-15 75.1
MS.gene022912.t1 MTR_3g099900 36.943 157 93 4 7 162 16 167 5.81e-15 74.7
MS.gene022912.t1 MTR_7g021630 37.037 135 70 4 8 139 16 138 6.67e-15 74.3
MS.gene022912.t1 MTR_7g021630 37.037 135 70 4 8 139 16 138 6.75e-15 74.3
MS.gene022912.t1 MTR_3g113782 61.538 52 20 0 5 56 13 64 6.91e-15 69.3
MS.gene022912.t1 MTR_4g092430 36.646 161 92 6 7 162 41 196 1.07e-14 74.3
MS.gene022912.t1 MTR_7g084080 31.658 199 125 5 7 199 15 208 1.08e-14 73.2
MS.gene022912.t1 MTR_4g092430 36.646 161 92 6 7 162 41 196 1.14e-14 74.3
MS.gene022912.t1 MTR_1g038710 34.000 200 121 5 1 189 11 210 1.19e-14 74.3
MS.gene022912.t1 MTR_4g014260 34.591 159 93 6 7 162 24 174 1.21e-14 74.3
MS.gene022912.t1 MTR_7g081290 42.991 107 56 3 9 112 18 122 1.52e-14 72.4
MS.gene022912.t1 MTR_8g062010 32.663 199 111 10 1 184 1 191 1.54e-14 73.9
MS.gene022912.t1 MTR_4g014260 34.591 159 93 6 7 162 24 174 1.60e-14 73.6
MS.gene022912.t1 MTR_2g007550 26.471 306 163 10 2 275 7 282 2.09e-14 72.8
MS.gene022912.t1 MTR_5g080710 33.862 189 112 7 9 189 33 216 2.51e-14 73.2
MS.gene022912.t1 MTR_1g053025 32.743 226 139 6 9 222 2 226 2.70e-14 72.8
MS.gene022912.t1 MTR_1g492880 47.619 84 42 1 8 89 5 88 3.50e-14 67.4
MS.gene022912.t1 MTR_8g017280 34.228 149 90 4 8 149 35 182 3.58e-14 71.6
MS.gene022912.t1 MTR_1g492880 47.619 84 42 1 8 89 5 88 3.79e-14 67.8
MS.gene022912.t1 MTR_4g093690 33.158 190 109 7 9 186 18 201 3.81e-14 71.2
MS.gene022912.t1 MTR_3g007830 34.965 143 84 4 8 147 10 146 5.33e-14 72.0
MS.gene022912.t1 MTR_3g008050 34.161 161 94 5 8 162 10 164 5.36e-14 72.0
MS.gene022912.t1 MTR_8g017280 34.228 149 90 4 8 149 35 182 7.23e-14 71.6
MS.gene022912.t1 MTR_3g007790 34.161 161 94 5 8 162 24 178 7.41e-14 71.6
MS.gene022912.t1 MTR_8g066650 34.815 135 83 3 7 139 78 209 8.19e-14 71.6
MS.gene022912.t1 MTR_5g039450 30.000 220 124 6 9 221 6 202 8.41e-14 71.2
MS.gene022912.t1 MTR_6g018660 33.140 172 99 4 7 162 18 189 9.44e-14 71.2
MS.gene022912.t1 MTR_5g060570 37.143 140 72 5 8 139 16 147 1.00e-13 70.1
MS.gene022912.t1 MTR_4g080610 30.568 229 113 7 1 221 1 191 1.33e-13 70.5
MS.gene022912.t1 MTR_8g468810 32.161 199 118 7 4 187 20 216 1.41e-13 70.5
MS.gene022912.t1 MTR_3g023270 30.909 165 110 3 8 171 11 172 1.42e-13 70.5
MS.gene022912.t1 MTR_0571s0010 48.611 72 35 1 4 73 27 98 1.45e-13 66.2
MS.gene022912.t1 MTR_4g056030 34.500 200 112 8 1 187 1 194 1.56e-13 70.9
MS.gene022912.t1 MTR_8g468810 32.161 199 118 7 4 187 20 216 1.65e-13 70.1
MS.gene022912.t1 MTR_5g021550 33.557 149 78 4 7 137 17 162 1.79e-13 67.4
MS.gene022912.t1 MTR_8g468810 32.161 199 118 7 4 187 20 216 1.80e-13 70.1
MS.gene022912.t1 MTR_3g023330 34.884 172 92 7 7 167 13 175 2.72e-13 69.7
MS.gene022912.t1 MTR_8g468810 32.161 199 118 7 4 187 20 216 2.73e-13 69.7
MS.gene022912.t1 MTR_3g023470 34.591 159 97 5 8 165 14 166 3.29e-13 69.7
MS.gene022912.t1 MTR_8g014260 29.412 204 122 5 4 187 11 212 3.42e-13 69.7
MS.gene022912.t1 MTR_8g468810 32.161 199 118 7 4 187 20 216 4.12e-13 69.7
MS.gene022912.t1 MTR_2g007530 32.222 180 86 5 4 147 14 193 4.48e-13 68.9
MS.gene022912.t1 MTR_4g032730 31.122 196 117 6 9 187 15 209 5.99e-13 68.9
MS.gene022912.t1 MTR_2g047858 29.474 190 120 5 9 187 115 301 7.23e-13 68.9
MS.gene022912.t1 MTR_7g021930 28.662 314 166 14 8 289 9 296 7.98e-13 68.2
MS.gene022912.t1 MTR_7g021970 28.662 314 166 14 8 289 9 296 7.98e-13 68.2
MS.gene022912.t1 MTR_3g048290 29.474 190 124 3 9 189 23 211 1.02e-12 68.6
MS.gene022912.t1 MTR_2g047872 29.255 188 121 5 9 187 23 207 1.23e-12 68.2
MS.gene022912.t1 MTR_7g022060 29.577 284 156 12 8 273 9 266 1.26e-12 67.4
MS.gene022912.t1 MTR_3g463830 34.815 135 83 3 8 139 62 194 2.09e-12 67.0
MS.gene022912.t1 MTR_3g052940 30.682 176 113 4 1 170 20 192 4.15e-12 66.6
MS.gene022912.t1 MTR_3g052940 30.682 176 113 4 1 170 20 192 4.57e-12 66.6
MS.gene022912.t1 MTR_4g092440 26.293 232 135 6 7 210 30 253 4.69e-12 66.2
MS.gene022912.t1 MTR_1g013580 32.292 192 112 6 9 186 19 206 4.92e-12 66.2
MS.gene022912.t1 MTR_3g052940 30.682 176 113 4 1 170 20 192 5.12e-12 66.2
MS.gene022912.t1 MTR_6g018600 34.307 137 81 3 7 139 50 181 5.38e-12 66.2
MS.gene022912.t1 MTR_6g013160 58.333 48 20 0 1 48 1 48 6.27e-12 65.9
MS.gene022912.t1 MTR_1g094760 30.814 172 111 5 7 174 24 191 6.30e-12 66.2
MS.gene022912.t1 MTR_3g005980 31.056 161 102 3 8 162 16 173 6.74e-12 65.5
MS.gene022912.t1 MTR_4g092440 26.293 232 135 6 7 210 30 253 7.17e-12 65.9
MS.gene022912.t1 MTR_7g056280 35.461 141 82 4 8 139 5 145 8.08e-12 65.9
MS.gene022912.t1 MTR_8g015830 28.821 229 130 9 8 207 7 231 1.09e-11 65.5
MS.gene022912.t1 MTR_8g014290 31.579 152 81 4 8 137 9 159 1.13e-11 62.4
MS.gene022912.t1 MTR_1g077420 28.866 194 127 6 8 193 3 193 1.34e-11 63.9
MS.gene022912.t1 MTR_2g047848 30.476 210 121 8 9 203 7 206 1.44e-11 64.7
MS.gene022912.t1 MTR_8g468840 29.932 147 87 5 8 139 13 158 1.51e-11 64.7
MS.gene022912.t1 MTR_3g006580 29.592 196 125 5 11 197 35 226 1.70e-11 64.7
MS.gene022912.t1 MTR_3g052990 30.114 176 114 4 1 170 20 192 2.39e-11 64.3
MS.gene022912.t1 MTR_5g092960 31.122 196 116 8 9 187 19 212 2.45e-11 64.3
MS.gene022912.t1 MTR_8g015830 28.821 229 130 9 8 207 7 231 2.53e-11 64.3
MS.gene022912.t1 MTR_5g066560 33.333 141 87 3 8 145 8 144 2.62e-11 63.9
MS.gene022912.t1 MTR_5g092960 31.122 196 116 8 9 187 19 212 2.90e-11 63.9
MS.gene022912.t1 MTR_2g007090 55.072 69 31 0 5 73 6 74 3.50e-11 63.2
MS.gene022912.t1 MTR_4g051640 42.683 82 43 2 8 87 29 108 3.61e-11 60.8
MS.gene022912.t1 MTR_4g056020 31.980 197 119 7 1 186 1 193 5.63e-11 63.2
MS.gene022912.t1 MTR_2g103680 58.333 48 20 0 1 48 1 48 5.95e-11 59.3
MS.gene022912.t1 MTR_5g044800 30.814 172 110 6 8 174 29 196 6.43e-11 62.8
MS.gene022912.t1 MTR_0227s0010 31.122 196 112 7 9 189 15 202 6.75e-11 62.4
MS.gene022912.t1 MTR_8g077460 32.161 199 107 8 8 184 9 201 7.62e-11 62.4
MS.gene022912.t1 MTR_3g463820 38.144 97 56 2 7 101 11 105 8.81e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022912.t1 AT5G41840 35.909 220 101 9 9 201 14 220 1.96e-24 103
MS.gene022912.t1 AT3G59200 35.749 207 107 9 7 198 5 200 7.79e-24 99.8
MS.gene022912.t1 AT4G14103 35.122 205 115 6 6 200 5 201 1.30e-23 99.4
MS.gene022912.t1 AT4G14103 35.122 205 115 6 6 200 5 201 1.30e-23 99.4
MS.gene022912.t1 AT4G14103 35.122 205 115 6 6 200 5 201 1.64e-23 99.8
MS.gene022912.t1 AT5G56440 37.500 184 106 4 9 186 2 182 1.92e-23 99.8
MS.gene022912.t1 AT3G59200 35.749 207 107 9 7 198 5 200 5.80e-23 99.0
MS.gene022912.t1 AT3G58940 35.185 216 101 8 9 198 2 204 9.72e-21 92.4
MS.gene022912.t1 AT3G58940 35.185 216 101 8 9 198 2 204 9.72e-21 92.4
MS.gene022912.t1 AT3G58860 34.975 203 110 6 9 198 7 200 5.25e-20 90.1
MS.gene022912.t1 AT3G58930 33.488 215 105 8 9 198 2 203 5.39e-20 90.1
MS.gene022912.t1 AT3G58930 33.488 215 105 8 9 198 2 203 5.39e-20 90.1
MS.gene022912.t1 AT3G58930 33.488 215 105 8 9 198 2 203 5.39e-20 90.1
MS.gene022912.t1 AT4G10400 37.097 186 104 6 9 186 2 182 6.77e-20 89.4
MS.gene022912.t1 AT4G10400 37.097 186 104 6 9 186 2 182 6.77e-20 89.4
MS.gene022912.t1 AT4G10400 37.097 186 104 6 9 186 2 182 6.77e-20 89.4
MS.gene022912.t1 AT3G58980 36.634 202 105 8 9 198 2 192 7.16e-20 90.1
MS.gene022912.t1 AT4G00320 33.824 204 107 7 6 186 10 208 7.27e-20 89.7
MS.gene022912.t1 AT3G59240 33.503 197 112 7 4 186 3 194 7.57e-20 89.7
MS.gene022912.t1 AT4G14096 36.702 188 104 6 9 186 8 190 1.34e-19 89.0
MS.gene022912.t1 AT4G14096 36.702 188 104 6 9 186 8 190 1.34e-19 89.0
MS.gene022912.t1 AT4G09920 28.481 316 170 11 9 277 2 308 2.66e-19 86.7
MS.gene022912.t1 AT4G09920 28.481 316 170 11 9 277 2 308 2.66e-19 86.7
MS.gene022912.t1 AT4G09920 36.559 186 105 6 9 186 2 182 3.92e-19 85.9
MS.gene022912.t1 AT4G09920 36.559 186 105 6 9 186 2 182 3.92e-19 85.9
MS.gene022912.t1 AT4G09920 36.559 186 105 6 9 186 2 182 3.92e-19 85.9
MS.gene022912.t1 AT5G38590 32.653 196 119 5 9 197 2 191 4.63e-19 85.5
MS.gene022912.t1 AT4G00160 37.037 189 109 5 5 186 12 197 5.15e-19 87.0
MS.gene022912.t1 AT5G41830 33.831 201 105 7 9 186 13 208 8.45e-19 86.7
MS.gene022912.t1 AT5G38590 32.653 196 119 5 9 197 2 191 1.35e-18 85.5
MS.gene022912.t1 AT4G00315 33.171 205 110 6 9 196 2 196 2.43e-18 85.1
MS.gene022912.t1 AT5G56380 35.052 194 103 6 9 186 2 188 2.73e-18 84.7
MS.gene022912.t1 AT5G56380 35.052 194 103 6 9 186 2 188 2.73e-18 84.7
MS.gene022912.t1 AT3G03030 32.394 213 112 7 9 201 2 202 3.69e-18 83.6
MS.gene022912.t1 AT5G56370 37.017 181 105 5 9 184 2 178 4.88e-18 83.2
MS.gene022912.t1 AT3G03030 32.394 213 112 7 9 201 2 202 5.79e-18 84.0
MS.gene022912.t1 AT5G56370 37.017 181 105 5 9 184 2 178 6.42e-18 83.6
MS.gene022912.t1 AT5G56370 37.017 181 105 5 9 184 2 178 6.42e-18 83.6
MS.gene022912.t1 AT1G60400 33.696 184 114 3 9 186 14 195 9.56e-18 83.2
MS.gene022912.t1 AT3G58880 35.417 192 108 5 9 187 3 191 1.21e-17 83.2
MS.gene022912.t1 AT3G58900 34.536 194 106 7 9 187 2 189 1.29e-17 81.6
MS.gene022912.t1 AT3G58960 35.176 199 111 7 9 198 2 191 1.53e-17 82.8
MS.gene022912.t1 AT3G59210 35.417 192 109 5 7 186 5 193 1.54e-17 82.8
MS.gene022912.t1 AT3G59210 35.417 192 109 5 7 186 5 193 1.54e-17 82.8
MS.gene022912.t1 AT3G59210 35.417 192 109 5 7 186 5 193 1.54e-17 82.8
MS.gene022912.t1 AT3G59210 35.417 192 109 5 7 186 5 193 1.54e-17 82.8
MS.gene022912.t1 AT3G59210 35.417 192 109 5 7 186 5 193 1.54e-17 82.8
MS.gene022912.t1 AT3G58900 34.536 194 106 7 9 187 2 189 1.73e-17 81.6
MS.gene022912.t1 AT3G58900 34.536 194 106 7 9 187 2 189 1.73e-17 81.6
MS.gene022912.t1 AT1G16930 33.871 186 108 5 9 186 15 193 1.89e-17 82.4
MS.gene022912.t1 AT1G16930 33.871 186 108 5 9 186 15 193 1.89e-17 82.4
MS.gene022912.t1 AT1G16930 33.871 186 108 5 9 186 15 193 1.89e-17 82.4
MS.gene022912.t1 AT5G60610 34.921 189 105 5 9 189 2 180 2.72e-17 81.6
MS.gene022912.t1 AT5G60610 34.921 189 105 5 9 189 2 180 2.72e-17 81.6
MS.gene022912.t1 AT3G58900 34.536 194 106 7 9 187 2 189 4.24e-17 81.6
MS.gene022912.t1 AT2G26860 33.493 209 112 4 9 200 2 200 5.92e-17 80.9
MS.gene022912.t1 AT2G26860 33.493 209 112 4 9 200 2 200 5.92e-17 80.9
MS.gene022912.t1 AT3G03040 33.019 212 111 7 9 201 2 201 8.57e-17 80.5
MS.gene022912.t1 AT1G55660 33.659 205 109 6 9 196 53 247 1.66e-16 79.7
MS.gene022912.t1 AT3G59170 32.420 219 103 8 7 186 5 217 1.77e-16 79.7
MS.gene022912.t1 AT1G55660 34.343 198 103 6 9 189 53 240 1.93e-16 79.0
MS.gene022912.t1 AT5G22720 31.579 190 119 5 4 186 18 203 2.77e-16 79.0
MS.gene022912.t1 AT3G49150 33.166 199 105 9 6 186 13 201 2.87e-16 79.0
MS.gene022912.t1 AT1G51370 31.892 185 109 3 8 186 18 191 2.94e-16 78.2
MS.gene022912.t1 AT4G26340 31.429 210 131 6 9 212 2 204 3.15e-16 78.6
MS.gene022912.t1 AT1G60410 33.158 190 116 5 5 186 6 192 3.48e-16 78.6
MS.gene022912.t1 AT1G51370 31.892 185 109 3 8 186 18 191 3.65e-16 78.6
MS.gene022912.t1 AT1G58310 34.419 215 101 7 7 189 6 212 3.86e-16 79.0
MS.gene022912.t1 AT1G51370 31.892 185 109 3 8 186 18 191 4.01e-16 78.6
MS.gene022912.t1 AT3G50710 34.555 191 105 6 9 186 2 185 4.02e-16 78.6
MS.gene022912.t1 AT1G32375 32.796 186 114 6 9 186 2 184 5.87e-16 77.8
MS.gene022912.t1 AT1G32375 32.796 186 114 6 9 186 2 184 5.87e-16 77.8
MS.gene022912.t1 AT5G56810 31.053 190 118 4 5 186 11 195 7.15e-16 76.6
MS.gene022912.t1 AT5G53635 30.108 186 114 4 11 187 2 180 9.71e-16 77.4
MS.gene022912.t1 AT5G56810 31.053 190 118 4 5 186 11 195 9.90e-16 77.4
MS.gene022912.t1 AT5G56420 34.946 186 115 5 5 186 2 185 1.17e-15 77.0
MS.gene022912.t1 AT5G56420 34.946 186 115 5 5 186 2 185 1.17e-15 77.0
MS.gene022912.t1 AT5G56420 34.946 186 115 5 5 186 2 185 1.17e-15 77.0
MS.gene022912.t1 AT2G26030 30.270 185 117 6 9 186 4 183 1.28e-15 77.0
MS.gene022912.t1 AT2G26030 30.270 185 117 6 9 186 4 183 1.28e-15 77.0
MS.gene022912.t1 AT2G29930 32.432 185 120 3 4 186 7 188 1.46e-15 77.0
MS.gene022912.t1 AT2G29930 32.432 185 120 3 4 186 7 188 1.46e-15 77.0
MS.gene022912.t1 AT2G26030 30.270 185 117 6 9 186 4 183 1.52e-15 77.0
MS.gene022912.t1 AT2G42720 36.598 194 108 10 9 189 2 193 1.62e-15 76.6
MS.gene022912.t1 AT4G15060 31.282 195 112 6 9 189 26 212 1.63e-15 76.6
MS.gene022912.t1 AT5G22670 29.947 187 124 4 4 187 6 188 2.29e-15 76.3
MS.gene022912.t1 AT4G27050 33.981 206 100 5 9 186 4 201 2.30e-15 76.3
MS.gene022912.t1 AT4G27050 33.981 206 100 5 9 186 4 201 2.30e-15 76.3
MS.gene022912.t1 AT4G27050 33.981 206 100 5 9 186 4 201 2.30e-15 76.3
MS.gene022912.t1 AT4G27050 33.981 206 100 5 9 186 4 201 2.30e-15 76.3
MS.gene022912.t1 AT4G27050 33.981 206 100 5 9 186 4 201 2.30e-15 76.3
MS.gene022912.t1 AT4G15060 31.282 195 112 6 9 189 172 358 2.85e-15 76.3
MS.gene022912.t1 AT5G22610 27.368 190 129 3 5 186 14 202 3.48e-15 75.9
MS.gene022912.t1 AT5G22610 27.368 190 129 3 5 186 14 202 3.83e-15 75.9
MS.gene022912.t1 AT5G53840 33.333 201 118 5 2 197 11 200 4.89e-15 75.5
MS.gene022912.t1 AT5G50270 33.000 200 114 8 9 196 2 193 5.92e-15 74.3
MS.gene022912.t1 AT1G78760 29.947 187 121 5 6 186 13 195 5.95e-15 75.1
MS.gene022912.t1 AT5G25850 32.292 192 109 5 9 191 20 199 6.12e-15 75.1
MS.gene022912.t1 AT3G59230 31.683 202 116 6 4 186 7 205 6.52e-15 75.1
MS.gene022912.t1 AT4G26350 34.759 187 108 7 9 187 2 182 7.00e-15 74.7
MS.gene022912.t1 AT5G56820 33.511 188 118 4 2 187 8 190 7.28e-15 74.7
MS.gene022912.t1 AT3G60040 30.909 220 105 9 1 186 5 211 7.34e-15 75.1
MS.gene022912.t1 AT5G22660 33.668 199 113 9 6 197 10 196 7.86e-15 73.9
MS.gene022912.t1 AT3G60040 30.909 220 105 9 1 186 224 430 7.94e-15 75.1
MS.gene022912.t1 AT3G60040 30.909 220 105 9 1 186 225 431 8.01e-15 75.1
MS.gene022912.t1 AT1G80470 30.851 188 121 4 5 186 11 195 8.15e-15 74.7
MS.gene022912.t1 AT3G60040 32.701 211 113 9 1 186 222 428 9.04e-15 74.7
MS.gene022912.t1 AT3G60040 32.701 211 113 9 1 186 224 430 9.31e-15 74.7
MS.gene022912.t1 AT3G62440 35.437 206 96 9 9 186 2 198 1.11e-14 74.3
MS.gene022912.t1 AT1G48400 33.838 198 105 6 6 186 7 195 1.19e-14 74.3
MS.gene022912.t1 AT1G48400 33.838 198 105 6 6 186 7 195 1.27e-14 74.3
MS.gene022912.t1 AT5G50270 33.000 200 114 8 9 196 2 193 1.41e-14 73.9
MS.gene022912.t1 AT3G58920 34.694 196 107 7 9 186 2 194 2.40e-14 73.2
MS.gene022912.t1 AT5G22660 33.668 199 113 9 6 197 10 196 2.97e-14 73.2
MS.gene022912.t1 AT1G21990 31.892 185 119 4 7 186 7 189 6.13e-14 72.0
MS.gene022912.t1 AT4G22280 32.796 186 110 6 9 186 2 180 6.66e-14 71.2
MS.gene022912.t1 AT1G55030 31.217 189 122 4 1 186 11 194 6.83e-14 72.0
MS.gene022912.t1 AT4G13965 31.053 190 116 6 4 186 5 186 7.06e-14 71.6
MS.gene022912.t1 AT1G55030 31.217 189 122 4 1 186 1 184 8.10e-14 71.6
MS.gene022912.t1 AT4G22280 32.796 186 110 6 9 186 2 180 8.56e-14 71.6
MS.gene022912.t1 AT5G56690 29.703 202 126 5 11 200 4 201 1.24e-13 70.9
MS.gene022912.t1 AT1G69630 30.851 188 119 5 9 189 18 201 1.36e-13 70.9
MS.gene022912.t1 AT3G59190 33.333 198 110 7 6 186 9 201 1.39e-13 71.2
MS.gene022912.t1 AT3G59190 33.333 198 110 7 6 186 9 201 1.40e-13 70.9
MS.gene022912.t1 AT1G64540 35.676 185 93 7 11 186 7 174 1.43e-13 70.9
MS.gene022912.t1 AT1G64540 35.676 185 93 7 11 186 7 174 1.43e-13 70.9
MS.gene022912.t1 AT2G04230 33.333 192 112 6 7 186 11 198 2.04e-13 70.5
MS.gene022912.t1 AT5G53640 27.869 183 121 5 8 186 21 196 2.33e-13 68.6
MS.gene022912.t1 AT1G13780 33.503 197 106 8 9 186 10 200 2.52e-13 69.7
MS.gene022912.t1 AT5G22730 28.342 187 126 4 5 186 24 207 2.96e-13 69.7
MS.gene022912.t1 AT3G58930 31.401 207 86 9 9 198 2 169 3.12e-13 70.1
MS.gene022912.t1 AT3G58930 31.401 207 86 9 9 198 2 169 3.12e-13 70.1
MS.gene022912.t1 AT1G13780 33.503 197 106 8 9 186 10 200 3.29e-13 70.1
MS.gene022912.t1 AT5G22730 28.342 187 126 4 5 186 24 207 4.02e-13 69.7
MS.gene022912.t1 AT5G22730 28.342 187 126 4 5 186 24 207 4.02e-13 69.7
MS.gene022912.t1 AT5G38390 32.468 231 127 9 9 229 2 213 4.10e-13 69.7
MS.gene022912.t1 AT4G13960 33.161 193 106 7 9 186 2 186 5.80e-13 69.3
MS.gene022912.t1 AT4G13960 33.161 193 106 7 9 186 2 186 5.80e-13 69.3
MS.gene022912.t1 AT5G38392 32.836 201 104 7 9 186 2 194 6.20e-13 67.0
MS.gene022912.t1 AT3G52680 32.984 191 115 5 5 187 17 202 7.15e-13 68.9
MS.gene022912.t1 AT1G22000 32.215 149 85 4 8 149 28 167 7.74e-13 68.9
MS.gene022912.t1 AT5G35995 34.737 190 109 8 5 186 1 183 8.19e-13 68.6
MS.gene022912.t1 AT5G35995 34.737 190 109 8 5 186 1 183 8.19e-13 68.6
MS.gene022912.t1 AT3G52680 32.984 191 115 5 5 187 17 202 9.61e-13 68.2
MS.gene022912.t1 AT3G26922 30.435 184 121 5 7 186 12 192 9.61e-13 67.8
MS.gene022912.t1 AT3G26922 30.435 184 121 5 7 186 12 192 9.61e-13 67.8
MS.gene022912.t1 AT5G27750 31.500 200 104 7 9 186 5 193 1.93e-12 67.8
MS.gene022912.t1 AT5G27750 31.500 200 104 7 9 186 5 193 1.98e-12 67.4
MS.gene022912.t1 AT5G38590 29.843 191 117 5 9 187 2 187 2.03e-12 66.6
MS.gene022912.t1 AT5G41630 31.343 201 114 6 6 186 9 205 2.06e-12 67.4
MS.gene022912.t1 AT5G56560 31.053 190 115 7 5 186 1 182 3.31e-12 66.6
MS.gene022912.t1 AT5G56410 30.660 212 121 7 9 196 2 211 3.31e-12 67.0
MS.gene022912.t1 AT3G59000 32.184 174 98 4 9 165 2 172 3.96e-12 66.6
MS.gene022912.t1 AT1G66310 30.811 185 114 6 9 186 19 196 4.50e-12 66.6
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 5.43e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 5.43e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 5.68e-12 65.5
MS.gene022912.t1 AT1G78750 29.167 192 120 5 9 187 18 206 7.12e-12 65.9
MS.gene022912.t1 AT1G78750 29.167 192 120 5 9 187 18 206 7.12e-12 65.9
MS.gene022912.t1 AT5G44950 30.233 215 126 7 9 210 4 207 7.34e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 7.40e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 7.40e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 7.40e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 7.40e-12 65.9
MS.gene022912.t1 AT1G05080 31.053 190 114 5 5 184 9 191 7.99e-12 65.9
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 21 211 9.70e-12 65.5
MS.gene022912.t1 AT5G25860 27.723 202 125 5 6 186 9 210 1.01e-11 65.5
MS.gene022912.t1 AT5G44940 30.159 189 119 6 9 187 5 190 1.01e-11 65.1
MS.gene022912.t1 AT1G06630 30.208 192 119 5 9 186 12 202 1.04e-11 65.5
MS.gene022912.t1 AT1G19070 44.578 83 42 2 9 88 2 83 1.10e-11 60.5
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 25 205 1.17e-11 65.1
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.20e-11 64.7
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.20e-11 64.7
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.20e-11 64.7
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.20e-11 64.7
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.27e-11 64.7
MS.gene022912.t1 AT2G29910 29.348 184 125 3 5 186 1 181 1.27e-11 64.7
MS.gene022912.t1 AT3G56780 33.149 181 110 6 11 186 9 183 1.29e-11 65.1
MS.gene022912.t1 AT3G49020 32.275 189 114 6 5 186 18 199 1.36e-11 65.1
MS.gene022912.t1 AT3G56780 33.149 181 110 6 11 186 9 183 1.38e-11 65.1
MS.gene022912.t1 AT3G44810 29.902 204 112 7 4 186 3 196 1.49e-11 65.1
MS.gene022912.t1 AT3G59000 36.134 119 62 3 9 116 2 117 1.98e-11 64.3
MS.gene022912.t1 AT3G56780 33.149 181 110 6 11 186 9 183 2.33e-11 64.3
MS.gene022912.t1 AT3G44090 28.777 278 174 10 11 268 26 299 3.70e-11 63.5
MS.gene022912.t1 AT3G59150 31.795 195 118 8 6 187 10 202 4.50e-11 63.5
MS.gene022912.t1 AT1G66290 28.415 183 114 8 9 184 29 201 4.73e-11 63.5
MS.gene022912.t1 AT5G18780 29.319 191 116 6 6 187 8 188 5.18e-11 63.2
MS.gene022912.t1 AT5G18780 29.319 191 116 6 6 187 8 188 5.18e-11 63.2
MS.gene022912.t1 AT5G18780 30.270 185 122 4 6 187 8 188 6.64e-11 62.8
MS.gene022912.t1 AT5G18780 30.270 185 122 4 6 187 8 188 6.64e-11 62.8
MS.gene022912.t1 AT1G52650 32.124 193 109 7 9 186 2 187 8.74e-11 62.8
MS.gene022912.t1 AT1G26890 31.548 168 106 5 7 171 36 197 9.87e-11 62.0
MS.gene022912.t1 AT1G26890 31.548 168 106 5 7 171 36 197 9.87e-11 62.0

Find 57 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTATCTTGTGTACTTT+TGG 0.202489 7.2:-47034448 MS.gene022912:CDS
CAGAGGAAGTTGTGGATAAT+TGG 0.272170 7.2:-47033736 MS.gene022912:CDS
GAAAGGATGTGACGTATAAT+TGG 0.287362 7.2:+47034879 None:intergenic
GTCCTCCGTCTTTCTCTTAC+GGG 0.290040 7.2:-47034724 MS.gene022912:CDS
AGTTGTGTCGAAAGGCATTC+TGG 0.303678 7.2:+47033695 None:intergenic
ACTTGTGATTGCAGCGGTTT+TGG 0.306100 7.2:+47034845 None:intergenic
CAAAGAGATGGAGCCCATTA+TGG 0.316529 7.2:-47034815 MS.gene022912:CDS
CTATCTTCAGTTGAAATTGA+TGG 0.326180 7.2:+47034921 None:intergenic
GAAAGACGGAGGACACAAAA+TGG 0.329112 7.2:+47034733 None:intergenic
TATATCTTCCAGCTTCTATC+TGG 0.336401 7.2:-47034414 MS.gene022912:CDS
TCGTTGTTCTTCATTTGAAA+TGG 0.352408 7.2:-47034527 MS.gene022912:CDS
AGACCTTTCTTCACTGGTTG+TGG 0.367917 7.2:-47034493 MS.gene022912:CDS
TGTCCTCCGTCTTTCTCTTA+CGG 0.370766 7.2:-47034725 MS.gene022912:CDS
TCAGCTTCTGCGTGCAGAAT+TGG 0.378813 7.2:-47034214 MS.gene022912:intron
AGCTTGCAATTCCTCTAGAA+TGG 0.388303 7.2:+47034386 None:intergenic
CATCAATTTCAACTGAAGAT+AGG 0.390314 7.2:-47034920 MS.gene022912:CDS
AGGCATTCTGGAATATTTGC+TGG 0.398275 7.2:+47033707 None:intergenic
ACGAGAACTGATAGCCATAA+TGG 0.404651 7.2:+47034801 None:intergenic
ATCTGATGGTTTCAAAGGCT+TGG 0.415326 7.2:-47033388 MS.gene022912:CDS
GCTTGCAATTCCTCTAGAAT+GGG 0.418346 7.2:+47034387 None:intergenic
AGTTCTCGTTCTTCATTTCG+AGG 0.428788 7.2:-47034787 MS.gene022912:CDS
AGTGAAAGACCTTTCTTCAC+TGG 0.459063 7.2:-47034499 MS.gene022912:CDS
AACCTCAATCTTCAAATGTC+CGG 0.459815 7.2:-47034591 MS.gene022912:CDS
AAAGGATTCGAAGTTTAGAA+AGG 0.470407 7.2:+47034758 None:intergenic
CGAGAACTGATAGCCATAAT+GGG 0.471029 7.2:+47034802 None:intergenic
TGAGCAAAAGCGTCAAAGAA+TGG 0.471253 7.2:+47034256 None:intergenic
TGCCGGACATTTGAAGATTG+AGG 0.483835 7.2:+47034589 None:intergenic
ATGTGACGTATAATTGGATC+TGG 0.494357 7.2:+47034885 None:intergenic
GTAACATCTGATGGTTTCAA+AGG 0.495316 7.2:-47033393 MS.gene022912:CDS
AGAGGAAGTTGTGGATAATT+GGG 0.501090 7.2:-47033735 MS.gene022912:CDS
ATCGATAGATATCCTGTGGC+AGG 0.505474 7.2:+47034646 None:intergenic
GAGCAAAAGCGTCAAAGAAT+GGG 0.507029 7.2:+47034257 None:intergenic
ATTAGATTCTTCGTATGCAA+TGG 0.519821 7.2:-47033415 MS.gene022912:intron
TGGGGCATCCAGATAGAAGC+TGG 0.524755 7.2:+47034406 None:intergenic
ACCTTCTGCCATCCTGCCAC+AGG 0.528038 7.2:-47034658 MS.gene022912:CDS
CAAGTATTCTCTCAAAGAGA+TGG 0.531487 7.2:-47034827 MS.gene022912:CDS
TATGCAATGGTAACATCTGA+TGG 0.542503 7.2:-47033402 MS.gene022912:CDS
AATCCACAACCAGTGAAGAA+AGG 0.544763 7.2:+47034490 None:intergenic
ATGTTTGCTGTGATCAACTT+CGG 0.563431 7.2:+47034291 None:intergenic
TGAGAATGCAGAGGAAGTTG+TGG 0.592624 7.2:-47033744 MS.gene022912:CDS
AGTTGATGTGGAATGATCGA+AGG 0.594241 7.2:+47034688 None:intergenic
TCCTGTGGCAGGATGGCAGA+AGG 0.599566 7.2:+47034657 None:intergenic
ATCTGGATGCCCCATTCTAG+AGG 0.602110 7.2:-47034397 MS.gene022912:CDS
GTTGATGTGGAATGATCGAA+GGG 0.612053 7.2:+47034689 None:intergenic
ACGAGGTAATGTTATCATGC+CGG 0.617667 7.2:+47034572 None:intergenic
ATAGATATCCTGTGGCAGGA+TGG 0.644414 7.2:+47034650 None:intergenic
GGAGGACACAAAATGGCGAA+AGG 0.650251 7.2:+47034740 None:intergenic
AATGTCCCGTAAGAGAAAGA+CGG 0.651085 7.2:+47034719 None:intergenic
ACAGGACTTTGAGAATGCAG+AGG 0.652770 7.2:-47033753 MS.gene022912:intron
GGAAGTTGTGGATAATTGGG+TGG 0.656181 7.2:-47033732 MS.gene022912:CDS
CTTGCAATTCCTCTAGAATG+GGG 0.669159 7.2:+47034388 None:intergenic
GAGAATACTTGTGATTGCAG+CGG 0.672167 7.2:+47034839 None:intergenic
CTACAACTGAAAACGCTACG+AGG 0.680271 7.2:+47034555 None:intergenic
GTTCACGCTGTTGCACAACG+TGG 0.686083 7.2:-47034621 MS.gene022912:CDS
ACAAATCGATAGATATCCTG+TGG 0.692139 7.2:+47034642 None:intergenic
GTCCCGTAAGAGAAAGACGG+AGG 0.721006 7.2:+47034722 None:intergenic
TTGATGTGGAATGATCGAAG+GGG 0.792538 7.2:+47034690 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATATATAAAAT+TGG + chr7.2:47034516-47034535 None:intergenic 0.0%
!! TATATATAAAATTGGAAAAA+AGG + chr7.2:47034508-47034527 None:intergenic 10.0%
!! AAAAAAATTGAATTATTGAC+AGG - chr7.2:47034527-47034546 MS.gene022912:CDS 15.0%
!! ATGTTTAATTGTAAAAAACA+TGG - chr7.2:47033937-47033956 MS.gene022912:intron 15.0%
!!! AAGATAAGTTAAGTTTTTTT+AGG + chr7.2:47033841-47033860 None:intergenic 15.0%
!! TAATTGTAAAAAACATGGAA+TGG - chr7.2:47033942-47033961 MS.gene022912:intron 20.0%
!! TTATTTGATTGATGAAAGTT+AGG - chr7.2:47034816-47034835 MS.gene022912:CDS 20.0%
!! TTGAGTGATTAAAAGAAATT+GGG - chr7.2:47034254-47034273 MS.gene022912:CDS 20.0%
!! TTTGAGTGATTAAAAGAAAT+TGG - chr7.2:47034253-47034272 MS.gene022912:CDS 20.0%
! AGAAAAGAAAAGAAAAAGCT+AGG + chr7.2:47034467-47034486 None:intergenic 25.0%
!! TAACTTATCTTGTGTACTTT+TGG - chr7.2:47033850-47033869 MS.gene022912:intron 25.0%
!! TAACTTTTCTAAATCACAAC+AGG - chr7.2:47034286-47034305 MS.gene022912:CDS 25.0%
!!! AAGTTAAGTTTTTTTAGGAG+AGG + chr7.2:47033836-47033855 None:intergenic 25.0%
!!! ATGGTAAGATTTTGAAGTTT+TGG + chr7.2:47034425-47034444 None:intergenic 25.0%
AAAGGATTCGAAGTTTAGAA+AGG + chr7.2:47033543-47033562 None:intergenic 30.0%
ATTAGATTCTTCGTATGCAA+TGG - chr7.2:47034883-47034902 MS.gene022912:CDS 30.0%
CATCAATTTCAACTGAAGAT+AGG - chr7.2:47033378-47033397 MS.gene022912:CDS 30.0%
CTATCTTCAGTTGAAATTGA+TGG + chr7.2:47033380-47033399 None:intergenic 30.0%
TAAGAGTTTACATGTTGATG+AGG + chr7.2:47034799-47034818 None:intergenic 30.0%
TCAAAATCTTACCATTCATC+AGG - chr7.2:47034430-47034449 MS.gene022912:CDS 30.0%
TCGTTGTTCTTCATTTGAAA+TGG - chr7.2:47033771-47033790 MS.gene022912:intron 30.0%
TCTCACAATGATTATGCTTA+AGG + chr7.2:47034367-47034386 None:intergenic 30.0%
! CGAATCTGTGTTATGAATTT+TGG - chr7.2:47034182-47034201 MS.gene022912:intron 30.0%
! TTTTGCTCATTTTACTTTGC+AGG - chr7.2:47034056-47034075 MS.gene022912:intron 30.0%
!! AAATTGGAAAAAAGGTGTTG+AGG + chr7.2:47034500-47034519 None:intergenic 30.0%
!! TTTTGGTTGGAACAAAAGAA+AGG + chr7.2:47033439-47033458 None:intergenic 30.0%
AACCTCAATCTTCAAATGTC+CGG - chr7.2:47033707-47033726 MS.gene022912:CDS 35.0%
AAGCAAGTTTCATCCGAATT+TGG + chr7.2:47034764-47034783 None:intergenic 35.0%
ACAAATCGATAGATATCCTG+TGG + chr7.2:47033659-47033678 None:intergenic 35.0%
AGAGGAAGTTGTGGATAATT+GGG - chr7.2:47034563-47034582 MS.gene022912:CDS 35.0%
AGCATAATCATTGTGAGAAG+TGG - chr7.2:47034369-47034388 MS.gene022912:CDS 35.0%
ATGTGACGTATAATTGGATC+TGG + chr7.2:47033416-47033435 None:intergenic 35.0%
CAAGTATTCTCTCAAAGAGA+TGG - chr7.2:47033471-47033490 MS.gene022912:intron 35.0%
CATCAACAAAACCTGATGAA+TGG + chr7.2:47034444-47034463 None:intergenic 35.0%
GAAAGGATGTGACGTATAAT+TGG + chr7.2:47033422-47033441 None:intergenic 35.0%
GTAACATCTGATGGTTTCAA+AGG - chr7.2:47034905-47034924 MS.gene022912:CDS 35.0%
TATATCTTCCAGCTTCTATC+TGG - chr7.2:47033884-47033903 MS.gene022912:intron 35.0%
TATGCAATGGTAACATCTGA+TGG - chr7.2:47034896-47034915 MS.gene022912:CDS 35.0%
TCACACAGATCATAATCGAA+GGG + chr7.2:47034162-47034181 None:intergenic 35.0%
TGCGAAACTTAAGATGTATG+AGG + chr7.2:47034322-47034341 None:intergenic 35.0%
!! ATGTTTGCTGTGATCAACTT+CGG + chr7.2:47034010-47034029 None:intergenic 35.0%
!!! AAGGTTTTGAACAGTTGATG+TGG + chr7.2:47033625-47033644 None:intergenic 35.0%
!!! AAGTTTTGAGTTGTGTCGAA+AGG + chr7.2:47034614-47034633 None:intergenic 35.0%
AATCCACAACCAGTGAAGAA+AGG + chr7.2:47033811-47033830 None:intergenic 40.0%
AATGTCCCGTAAGAGAAAGA+CGG + chr7.2:47033582-47033601 None:intergenic 40.0%
ACGAGAACTGATAGCCATAA+TGG + chr7.2:47033500-47033519 None:intergenic 40.0%
ACGAGGTAATGTTATCATGC+CGG + chr7.2:47033729-47033748 None:intergenic 40.0%
AGTGAAAGACCTTTCTTCAC+TGG - chr7.2:47033799-47033818 MS.gene022912:intron 40.0%
AGTTCTCGTTCTTCATTTCG+AGG - chr7.2:47033511-47033530 MS.gene022912:intron 40.0%
ATCCTACCTAGGATCAGAAA+GGG + chr7.2:47034227-47034246 None:intergenic 40.0%
ATCTGATGGTTTCAAAGGCT+TGG - chr7.2:47034910-47034929 MS.gene022912:CDS 40.0%
CAAATGCCAAGCACCAAATT+CGG - chr7.2:47034748-47034767 MS.gene022912:CDS 40.0%
CAGAGGAAGTTGTGGATAAT+TGG - chr7.2:47034562-47034581 MS.gene022912:CDS 40.0%
CGAGAACTGATAGCCATAAT+GGG + chr7.2:47033499-47033518 None:intergenic 40.0%
CTTTAACCCTTTCTGATCCT+AGG - chr7.2:47034218-47034237 MS.gene022912:CDS 40.0%
GAGAATACTTGTGATTGCAG+CGG + chr7.2:47033462-47033481 None:intergenic 40.0%
GTCACACAGATCATAATCGA+AGG + chr7.2:47034163-47034182 None:intergenic 40.0%
GTGCTTGGCATTTGTATCTA+CGG + chr7.2:47034742-47034761 None:intergenic 40.0%
GTTGATGTGGAATGATCGAA+GGG + chr7.2:47033612-47033631 None:intergenic 40.0%
TCAAACACTAGATCCTACCT+AGG + chr7.2:47034238-47034257 None:intergenic 40.0%
TTGATGTGGAATGATCGAAG+GGG + chr7.2:47033611-47033630 None:intergenic 40.0%
! AGCTTGCAATTCCTCTAGAA+TGG + chr7.2:47033915-47033934 None:intergenic 40.0%
! AGTTGATGTGGAATGATCGA+AGG + chr7.2:47033613-47033632 None:intergenic 40.0%
!! AGGCATTCTGGAATATTTGC+TGG + chr7.2:47034594-47034613 None:intergenic 40.0%
!! CTTGCAATTCCTCTAGAATG+GGG + chr7.2:47033913-47033932 None:intergenic 40.0%
!! GAGCAAAAGCGTCAAAGAAT+GGG + chr7.2:47034044-47034063 None:intergenic 40.0%
!! GCTTGCAATTCCTCTAGAAT+GGG + chr7.2:47033914-47033933 None:intergenic 40.0%
!! TGAGCAAAAGCGTCAAAGAA+TGG + chr7.2:47034045-47034064 None:intergenic 40.0%
!! TTTCATCCGAATTTGGTGCT+TGG + chr7.2:47034757-47034776 None:intergenic 40.0%
AACCCTTTCTGATCCTAGGT+AGG - chr7.2:47034222-47034241 MS.gene022912:CDS 45.0%
AAGTGGAAGTTGCTGCTAGA+AGG - chr7.2:47034386-47034405 MS.gene022912:CDS 45.0%
AGTGGAAGTTGCTGCTAGAA+GGG - chr7.2:47034387-47034406 MS.gene022912:CDS 45.0%
ATAGATATCCTGTGGCAGGA+TGG + chr7.2:47033651-47033670 None:intergenic 45.0%
ATCGATAGATATCCTGTGGC+AGG + chr7.2:47033655-47033674 None:intergenic 45.0%
CAAAGAGATGGAGCCCATTA+TGG - chr7.2:47033483-47033502 MS.gene022912:intron 45.0%
CTACAACTGAAAACGCTACG+AGG + chr7.2:47033746-47033765 None:intergenic 45.0%
GAAAGACGGAGGACACAAAA+TGG + chr7.2:47033568-47033587 None:intergenic 45.0%
GATCCTACCTAGGATCAGAA+AGG + chr7.2:47034228-47034247 None:intergenic 45.0%
GGAAGTTGTGGATAATTGGG+TGG - chr7.2:47034566-47034585 MS.gene022912:CDS 45.0%
GGCATTTGTATCTACGGAAG+AGG + chr7.2:47034736-47034755 None:intergenic 45.0%
TGAGAATGCAGAGGAAGTTG+TGG - chr7.2:47034554-47034573 MS.gene022912:CDS 45.0%
TGCCGGACATTTGAAGATTG+AGG + chr7.2:47033712-47033731 None:intergenic 45.0%
TGTCCTCCGTCTTTCTCTTA+CGG - chr7.2:47033573-47033592 MS.gene022912:intron 45.0%
! ACAGGACTTTGAGAATGCAG+AGG - chr7.2:47034545-47034564 MS.gene022912:CDS 45.0%
! ACTTGTGATTGCAGCGGTTT+TGG + chr7.2:47033456-47033475 None:intergenic 45.0%
! AGACCTTTCTTCACTGGTTG+TGG - chr7.2:47033805-47033824 MS.gene022912:intron 45.0%
! CTCGTAGCGTTTTCAGTTGT+AGG - chr7.2:47033744-47033763 MS.gene022912:CDS 45.0%
! GAAACTTGCTTCGTGCACAA+GGG - chr7.2:47034773-47034792 MS.gene022912:CDS 45.0%
! TGAAACTTGCTTCGTGCACA+AGG - chr7.2:47034772-47034791 MS.gene022912:CDS 45.0%
!! AGTTGTGTCGAAAGGCATTC+TGG + chr7.2:47034606-47034625 None:intergenic 45.0%
ATCTGGATGCCCCATTCTAG+AGG - chr7.2:47033901-47033920 MS.gene022912:intron 50.0%
GGAGGACACAAAATGGCGAA+AGG + chr7.2:47033561-47033580 None:intergenic 50.0%
GTCCTCCGTCTTTCTCTTAC+GGG - chr7.2:47033574-47033593 MS.gene022912:intron 50.0%
TCAGCTTCTGCGTGCAGAAT+TGG - chr7.2:47034084-47034103 MS.gene022912:intron 50.0%
!! GTGATTGCAGCGGTTTTGGT+TGG + chr7.2:47033452-47033471 None:intergenic 50.0%
GTCCCGTAAGAGAAAGACGG+AGG + chr7.2:47033579-47033598 None:intergenic 55.0%
GTTCACGCTGTTGCACAACG+TGG - chr7.2:47033677-47033696 MS.gene022912:intron 55.0%
! TGGGGCATCCAGATAGAAGC+TGG + chr7.2:47033895-47033914 None:intergenic 55.0%
!! AGAGGCGCTCTCGATTGACA+TGG + chr7.2:47034718-47034737 None:intergenic 55.0%
ACCTTCTGCCATCCTGCCAC+AGG - chr7.2:47033640-47033659 MS.gene022912:intron 60.0%
TCCTGTGGCAGGATGGCAGA+AGG + chr7.2:47033644-47033663 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 47033371 47034949 47033371 ID=MS.gene022912
chr7.2 mRNA 47033371 47034949 47033371 ID=MS.gene022912.t1;Parent=MS.gene022912
chr7.2 exon 47034215 47034949 47034215 ID=MS.gene022912.t1.exon1;Parent=MS.gene022912.t1
chr7.2 CDS 47034215 47034949 47034215 ID=cds.MS.gene022912.t1;Parent=MS.gene022912.t1
chr7.2 exon 47033687 47033771 47033687 ID=MS.gene022912.t1.exon2;Parent=MS.gene022912.t1
chr7.2 CDS 47033687 47033771 47033687 ID=cds.MS.gene022912.t1;Parent=MS.gene022912.t1
chr7.2 exon 47033371 47033432 47033371 ID=MS.gene022912.t1.exon3;Parent=MS.gene022912.t1
chr7.2 CDS 47033371 47033432 47033371 ID=cds.MS.gene022912.t1;Parent=MS.gene022912.t1
Gene Sequence

>MS.gene022912

ATGTCACCATCAATTTCAACTGAAGATAGGATTAGTGCTCTACCAGATCCAATTATACGTCACATCCTTTCTTTTGTTCCAACCAAAACCGCTGCAATCACAAGTATTCTCTCAAAGAGATGGAGCCCATTATGGCTATCAGTTCTCGTTCTTCATTTCGAGGACGAAACCTTTCTAAACTTCGAATCCTTTCGCCATTTTGTGTCCTCCGTCTTTCTCTTACGGGACATTACTTTACCCCTTCGATCATTCCACATCAACTGTTCAAAACCTTCTGCCATCCTGCCACAGGATATCTATCGATTTGTTCACGCTGTTGCACAACGTGGAATCGAGAACCTCAATCTTCAAATGTCCGGCATGATAACATTACCTCGTAGCGTTTTCAGTTGTAGGACACTCGTTGTTCTTCATTTGAAATGGATTACAGTGAAAGACCTTTCTTCACTGGTTGTGGATTTTCCTCTCCTAAAAAAACTTAACTTATCTTGTGTACTTTTGGAACGTACTGAATATATCTTCCAGCTTCTATCTGGATGCCCCATTCTAGAGGAATTGCAAGCTGAATGTTTAATTGTAAAAAACATGGAATGGCTTGTTTCACTGAATTTTGTACTAGAAAAGTTTCGAAGCTTACCGAAGTTGATCACAGCAAACATTACTAAATCGACCCATTCTTTGACGCTTTTGCTCATTTTACTTTGCAGGAAGTCTCAGCTTCTGCGTGCAGAATTGGTAAGAATATCATCGTTGATCTTTTTTAATCAACTTTAATAATTATAATTTTGCCCTTCGATTATGATCTGTGTGACGAATCTGTGTTATGAATTTTGGTTATGATATTGCACTTTAACCCTTTCTGATCCTAGGTAGGATCTAGTGTTTGAGTGATTAAAAGAAATTGGGTTTGATTTCTAACTTTTCTAAATCACAACAGGACACACGTCACCTCATACATCTTAAGTTTCGCAGTCTAACTAACATTGAGCTTATCCTTAAGCATAATCATTGTGAGAAGTGGAAGTTGCTGCTAGAAGGGCTGAAACGTTGTCCAAAACTTCAAAATCTTACCATTCATCAGGTTTTGTTGATGCCTAGCTTTTTCTTTTCTTTTCTTTTCTTTTCACCTCAACACCTTTTTTCCAATTTTATATATAAAAAAATTGAATTATTGACAGGACTTTGAGAATGCAGAGGAAGTTGTGGATAATTGGGTGGATCCAGCAAATATTCCAGAATGCCTTTCGACACAACTCAAAACTTGTTTGCTTAAAGACTATAAATGCACAGATTGTGAGCTTCAATTTGCAAAATATATTATGCAGAATGCGAAAGTATTGAAGACCATGTCAATCGAGAGCGCCTCTTCCGTAGATACAAATGCCAAGCACCAAATTCGGATGAAACTTGCTTCGTGCACAAGGGCCTCATCAACATGTAAACTCTTATTTGATTGATGAAAGTTAGGTCATGTTTGCACTTTGCAATAGTTCTTATATGTTTACTTCTTATATTAGATTCTTCGTATGCAATGGTAACATCTGATGGTTTCAAAGGCTTGGCATCTGTTTCAATTTGA

Protein sequence

>MS.gene022912.t1

MSPSISTEDRISALPDPIIRHILSFVPTKTAAITSILSKRWSPLWLSVLVLHFEDETFLNFESFRHFVSSVFLLRDITLPLRSFHINCSKPSAILPQDIYRFVHAVAQRGIENLNLQMSGMITLPRSVFSCRTLVVLHLKWITVKDLSSLVVDFPLLKKLNLSCVLLERTEYIFQLLSGCPILEELQAECLIVKNMEWLVSLNFVLEKFRSLPKLITANITKSTHSLTLLLILLCRKSQLLRAELDFENAEEVVDNWVDPANIPECLSTQLKTYSSYAMVTSDGFKGLASVSI