Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93027.t1 | XP_013446248.1 | 91.8 | 440 | 34 | 1 | 1 | 438 | 1 | 440 | 5.00E-234 | 820.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93027.t1 | Q9FM89 | 27.3 | 440 | 275 | 15 | 15 | 432 | 6 | 422 | 3.6e-23 | 110.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93027.t1 | A0A072U383 | 91.8 | 440 | 34 | 1 | 1 | 438 | 1 | 440 | 3.6e-234 | 820.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93027.t1 | MTR_8g070950 | 91.818 | 440 | 34 | 1 | 1 | 438 | 1 | 440 | 0.0 | 802 |
MS.gene93027.t1 | MTR_8g062010 | 61.969 | 447 | 136 | 11 | 9 | 436 | 3 | 434 | 7.38e-175 | 496 |
MS.gene93027.t1 | MTR_8g062080 | 57.516 | 459 | 162 | 9 | 1 | 436 | 1 | 449 | 4.09e-170 | 485 |
MS.gene93027.t1 | MTR_8g062310 | 59.624 | 426 | 152 | 8 | 15 | 437 | 25 | 433 | 1.87e-164 | 470 |
MS.gene93027.t1 | MTR_8g058965 | 56.632 | 475 | 152 | 13 | 1 | 436 | 1 | 460 | 1.29e-160 | 461 |
MS.gene93027.t1 | MTR_8g469020 | 55.022 | 458 | 163 | 8 | 15 | 437 | 7 | 456 | 4.38e-157 | 452 |
MS.gene93027.t1 | MTR_8g062300 | 53.469 | 490 | 165 | 13 | 1 | 436 | 1 | 481 | 2.88e-153 | 443 |
MS.gene93027.t1 | MTR_8g467790 | 57.447 | 376 | 116 | 7 | 15 | 376 | 148 | 493 | 3.12e-132 | 390 |
MS.gene93027.t1 | MTR_4g050250 | 51.522 | 427 | 151 | 13 | 1 | 378 | 1 | 420 | 6.50e-123 | 364 |
MS.gene93027.t1 | MTR_2g083840 | 43.644 | 472 | 211 | 20 | 1 | 432 | 1 | 457 | 7.64e-95 | 293 |
MS.gene93027.t1 | MTR_8g468810 | 40.842 | 475 | 226 | 17 | 1 | 432 | 1 | 463 | 1.17e-92 | 288 |
MS.gene93027.t1 | MTR_8g058970 | 40.787 | 483 | 226 | 15 | 3 | 432 | 2 | 477 | 2.25e-89 | 280 |
MS.gene93027.t1 | MTR_8g062270 | 40.312 | 449 | 225 | 13 | 15 | 431 | 16 | 453 | 5.45e-85 | 268 |
MS.gene93027.t1 | MTR_8g014260 | 42.549 | 463 | 223 | 21 | 1 | 432 | 1 | 451 | 3.18e-84 | 265 |
MS.gene93027.t1 | MTR_4g032730 | 37.107 | 477 | 243 | 13 | 1 | 431 | 1 | 466 | 3.24e-81 | 258 |
MS.gene93027.t1 | MTR_8g467800 | 39.700 | 466 | 234 | 15 | 7 | 437 | 5 | 458 | 7.12e-76 | 244 |
MS.gene93027.t1 | MTR_8g468760 | 39.294 | 453 | 202 | 14 | 12 | 431 | 6 | 418 | 2.05e-74 | 239 |
MS.gene93027.t1 | MTR_5g092960 | 37.983 | 466 | 245 | 14 | 1 | 431 | 5 | 461 | 3.23e-74 | 240 |
MS.gene93027.t1 | MTR_2g086020 | 81.250 | 144 | 27 | 0 | 294 | 437 | 177 | 320 | 4.39e-73 | 232 |
MS.gene93027.t1 | MTR_2g086020 | 47.682 | 151 | 58 | 5 | 41 | 179 | 1 | 142 | 2.84e-31 | 122 |
MS.gene93027.t1 | MTR_8g468840 | 38.616 | 448 | 232 | 15 | 14 | 430 | 13 | 448 | 1.11e-71 | 233 |
MS.gene93027.t1 | MTR_8g468810 | 40.731 | 383 | 174 | 16 | 1 | 342 | 1 | 371 | 3.18e-67 | 219 |
MS.gene93027.t1 | MTR_8g445780 | 40.488 | 410 | 199 | 21 | 1 | 385 | 1 | 390 | 2.36e-64 | 212 |
MS.gene93027.t1 | MTR_8g468810 | 42.345 | 307 | 130 | 14 | 1 | 271 | 1 | 296 | 8.59e-57 | 190 |
MS.gene93027.t1 | MTR_8g468810 | 42.345 | 307 | 130 | 14 | 1 | 271 | 1 | 296 | 1.41e-56 | 190 |
MS.gene93027.t1 | MTR_8g468810 | 42.345 | 307 | 130 | 14 | 1 | 271 | 1 | 296 | 2.77e-56 | 190 |
MS.gene93027.t1 | MTR_8g014160 | 34.753 | 446 | 206 | 20 | 13 | 432 | 39 | 425 | 8.65e-55 | 188 |
MS.gene93027.t1 | MTR_5g092960 | 37.534 | 373 | 196 | 11 | 1 | 342 | 5 | 371 | 3.53e-49 | 172 |
MS.gene93027.t1 | MTR_4g024710 | 38.176 | 296 | 156 | 13 | 154 | 432 | 62 | 347 | 4.27e-40 | 147 |
MS.gene93027.t1 | MTR_8g467800 | 39.249 | 293 | 147 | 11 | 7 | 273 | 5 | 292 | 6.32e-39 | 144 |
MS.gene93027.t1 | MTR_1g041245 | 31.042 | 451 | 215 | 18 | 9 | 432 | 5 | 386 | 4.66e-38 | 142 |
MS.gene93027.t1 | MTR_8g014210 | 39.831 | 236 | 128 | 7 | 206 | 432 | 1 | 231 | 1.50e-36 | 134 |
MS.gene93027.t1 | MTR_7g056433 | 28.868 | 433 | 244 | 15 | 12 | 432 | 9 | 389 | 3.36e-33 | 129 |
MS.gene93027.t1 | MTR_5g021550 | 49.689 | 161 | 62 | 8 | 5 | 148 | 4 | 162 | 1.66e-31 | 118 |
MS.gene93027.t1 | MTR_3g099800 | 67.816 | 87 | 27 | 1 | 344 | 429 | 19 | 105 | 4.31e-31 | 115 |
MS.gene93027.t1 | MTR_8g077460 | 47.368 | 133 | 67 | 3 | 300 | 432 | 246 | 375 | 9.17e-31 | 122 |
MS.gene93027.t1 | MTR_8g077460 | 38.528 | 231 | 116 | 11 | 1 | 215 | 1 | 221 | 2.96e-27 | 112 |
MS.gene93027.t1 | MTR_5g080710 | 29.478 | 441 | 266 | 18 | 9 | 424 | 26 | 446 | 3.22e-30 | 122 |
MS.gene93027.t1 | MTR_4g024745 | 36.462 | 277 | 151 | 12 | 155 | 415 | 17 | 284 | 6.24e-29 | 115 |
MS.gene93027.t1 | MTR_7g115270 | 27.679 | 448 | 251 | 19 | 5 | 429 | 2 | 399 | 1.41e-27 | 113 |
MS.gene93027.t1 | MTR_7g098510 | 28.571 | 448 | 247 | 18 | 1 | 432 | 1 | 391 | 2.68e-27 | 112 |
MS.gene93027.t1 | MTR_6g022500 | 28.345 | 441 | 228 | 20 | 15 | 432 | 101 | 476 | 1.06e-26 | 112 |
MS.gene93027.t1 | MTR_5g008920 | 27.517 | 447 | 241 | 17 | 8 | 435 | 2 | 384 | 1.95e-26 | 110 |
MS.gene93027.t1 | MTR_5g008950 | 26.376 | 436 | 230 | 19 | 17 | 432 | 1 | 365 | 1.86e-25 | 107 |
MS.gene93027.t1 | MTR_3g108150 | 25.986 | 431 | 250 | 14 | 14 | 431 | 12 | 386 | 4.68e-25 | 106 |
MS.gene93027.t1 | MTR_5g084070 | 28.082 | 438 | 277 | 17 | 6 | 424 | 1 | 419 | 6.47e-25 | 106 |
MS.gene93027.t1 | MTR_1089s0010 | 26.316 | 437 | 246 | 18 | 11 | 432 | 4 | 379 | 2.45e-24 | 104 |
MS.gene93027.t1 | MTR_2g007450 | 28.188 | 447 | 244 | 17 | 15 | 429 | 16 | 417 | 2.58e-24 | 104 |
MS.gene93027.t1 | MTR_1g085120 | 27.816 | 435 | 244 | 18 | 14 | 432 | 91 | 471 | 4.15e-24 | 104 |
MS.gene93027.t1 | MTR_1g108820 | 30.260 | 423 | 240 | 19 | 15 | 429 | 8 | 383 | 4.72e-24 | 103 |
MS.gene93027.t1 | MTR_1g085120 | 27.816 | 435 | 244 | 18 | 14 | 432 | 166 | 546 | 4.81e-24 | 105 |
MS.gene93027.t1 | MTR_7g033915 | 27.626 | 438 | 224 | 19 | 9 | 431 | 5 | 364 | 6.36e-24 | 102 |
MS.gene93027.t1 | MTR_7g098480 | 26.398 | 447 | 254 | 11 | 1 | 431 | 1 | 388 | 4.14e-23 | 101 |
MS.gene93027.t1 | MTR_6g011460 | 29.280 | 403 | 214 | 15 | 15 | 404 | 46 | 390 | 4.25e-23 | 101 |
MS.gene93027.t1 | MTR_7g026500 | 28.000 | 450 | 246 | 22 | 3 | 431 | 2 | 394 | 1.53e-22 | 99.4 |
MS.gene93027.t1 | MTR_4g024720 | 42.222 | 180 | 70 | 9 | 1 | 149 | 1 | 177 | 4.84e-22 | 94.0 |
MS.gene93027.t1 | MTR_3g109982 | 28.755 | 466 | 249 | 23 | 8 | 411 | 10 | 454 | 5.70e-22 | 99.4 |
MS.gene93027.t1 | MTR_7g098570 | 26.949 | 449 | 244 | 16 | 1 | 427 | 2 | 388 | 7.20e-22 | 98.2 |
MS.gene93027.t1 | MTR_8g014290 | 40.909 | 154 | 71 | 7 | 13 | 148 | 8 | 159 | 8.28e-22 | 92.0 |
MS.gene93027.t1 | MTR_7g007080 | 28.035 | 453 | 224 | 20 | 13 | 435 | 2 | 382 | 1.06e-21 | 96.7 |
MS.gene93027.t1 | MTR_5g058100 | 28.018 | 439 | 238 | 17 | 11 | 431 | 5 | 383 | 1.22e-21 | 96.7 |
MS.gene93027.t1 | MTR_2g008310 | 27.602 | 442 | 224 | 19 | 15 | 432 | 2 | 371 | 2.23e-21 | 95.9 |
MS.gene93027.t1 | MTR_7g034115 | 30.488 | 410 | 191 | 19 | 15 | 399 | 11 | 351 | 2.26e-21 | 95.5 |
MS.gene93027.t1 | MTR_3g082890 | 27.948 | 458 | 250 | 20 | 1 | 432 | 81 | 484 | 5.68e-21 | 95.5 |
MS.gene93027.t1 | MTR_7g056447 | 35.714 | 196 | 104 | 9 | 9 | 194 | 3 | 186 | 7.54e-21 | 92.8 |
MS.gene93027.t1 | MTR_6g022360 | 27.970 | 404 | 205 | 18 | 15 | 401 | 43 | 377 | 1.07e-20 | 94.0 |
MS.gene93027.t1 | MTR_2g008320 | 28.378 | 444 | 224 | 20 | 15 | 432 | 52 | 427 | 2.44e-20 | 93.2 |
MS.gene93027.t1 | MTR_6g040270 | 27.378 | 431 | 233 | 17 | 17 | 429 | 10 | 378 | 3.98e-20 | 92.0 |
MS.gene93027.t1 | MTR_8g085430 | 34.848 | 198 | 104 | 8 | 15 | 196 | 11 | 199 | 7.49e-20 | 90.5 |
MS.gene93027.t1 | MTR_7g056287 | 26.157 | 432 | 243 | 15 | 14 | 431 | 2 | 371 | 1.03e-19 | 90.5 |
MS.gene93027.t1 | MTR_3g467400 | 26.667 | 435 | 232 | 20 | 15 | 432 | 3 | 367 | 1.21e-19 | 90.5 |
MS.gene93027.t1 | MTR_7g032380 | 35.079 | 191 | 106 | 8 | 15 | 196 | 11 | 192 | 1.44e-19 | 90.1 |
MS.gene93027.t1 | MTR_7g032380 | 32.847 | 137 | 79 | 4 | 305 | 432 | 224 | 356 | 5.45e-11 | 64.3 |
MS.gene93027.t1 | MTR_7g056277 | 25.740 | 439 | 244 | 15 | 10 | 431 | 254 | 627 | 1.77e-19 | 91.3 |
MS.gene93027.t1 | MTR_5g058000 | 28.704 | 432 | 228 | 20 | 15 | 431 | 8 | 374 | 3.38e-19 | 89.4 |
MS.gene93027.t1 | MTR_5g073420 | 33.508 | 191 | 111 | 8 | 15 | 195 | 11 | 195 | 4.85e-19 | 89.0 |
MS.gene93027.t1 | MTR_3g036250 | 25.459 | 436 | 233 | 16 | 12 | 429 | 2 | 363 | 1.98e-18 | 86.7 |
MS.gene93027.t1 | MTR_0009s0080 | 27.317 | 410 | 230 | 16 | 7 | 399 | 9 | 367 | 2.56e-18 | 87.0 |
MS.gene93027.t1 | MTR_7g056420 | 27.021 | 433 | 221 | 19 | 9 | 424 | 3 | 357 | 6.75e-18 | 87.0 |
MS.gene93027.t1 | MTR_7g056430 | 27.021 | 433 | 221 | 19 | 9 | 424 | 3 | 357 | 8.73e-18 | 86.7 |
MS.gene93027.t1 | MTR_4g039440 | 27.483 | 433 | 245 | 21 | 15 | 432 | 34 | 412 | 9.56e-18 | 85.1 |
MS.gene93027.t1 | MTR_3g105060 | 25.901 | 444 | 231 | 18 | 9 | 432 | 8 | 373 | 2.62e-17 | 83.6 |
MS.gene93027.t1 | MTR_4g024770 | 62.903 | 62 | 20 | 2 | 1 | 60 | 8 | 68 | 4.82e-17 | 75.9 |
MS.gene93027.t1 | MTR_6g045333 | 26.304 | 441 | 257 | 18 | 9 | 431 | 55 | 445 | 5.03e-17 | 83.2 |
MS.gene93027.t1 | MTR_3g087260 | 26.415 | 477 | 279 | 18 | 5 | 431 | 2 | 456 | 6.32e-17 | 83.2 |
MS.gene93027.t1 | MTR_7g088260 | 27.149 | 442 | 230 | 21 | 14 | 432 | 90 | 462 | 1.01e-16 | 82.4 |
MS.gene93027.t1 | MTR_8g014230 | 46.429 | 84 | 43 | 2 | 342 | 425 | 17 | 98 | 2.35e-16 | 75.1 |
MS.gene93027.t1 | MTR_2g007400 | 25.330 | 454 | 241 | 20 | 15 | 432 | 12 | 403 | 3.89e-16 | 80.5 |
MS.gene93027.t1 | MTR_5g061680 | 34.737 | 190 | 108 | 7 | 15 | 195 | 11 | 193 | 4.83e-16 | 79.3 |
MS.gene93027.t1 | MTR_5g073370 | 27.518 | 407 | 223 | 18 | 12 | 405 | 2 | 349 | 5.15e-16 | 79.7 |
MS.gene93027.t1 | MTR_1g053025 | 27.664 | 441 | 237 | 22 | 15 | 429 | 2 | 386 | 5.20e-16 | 79.7 |
MS.gene93027.t1 | MTR_4g093690 | 33.088 | 272 | 143 | 16 | 12 | 267 | 15 | 263 | 1.96e-15 | 76.6 |
MS.gene93027.t1 | MTR_3g107160 | 25.917 | 436 | 249 | 15 | 12 | 432 | 7 | 383 | 3.55e-15 | 77.4 |
MS.gene93027.t1 | MTR_5g083890 | 26.316 | 437 | 234 | 20 | 14 | 414 | 5 | 389 | 4.14e-15 | 77.8 |
MS.gene93027.t1 | MTR_7g075820 | 23.884 | 448 | 254 | 19 | 11 | 429 | 2 | 391 | 4.30e-15 | 77.0 |
MS.gene93027.t1 | MTR_3g107120 | 25.537 | 419 | 225 | 17 | 10 | 399 | 4 | 364 | 1.11e-14 | 75.9 |
MS.gene93027.t1 | MTR_7g033990 | 29.902 | 204 | 116 | 7 | 9 | 197 | 5 | 196 | 1.49e-14 | 75.5 |
MS.gene93027.t1 | MTR_4g056030 | 35.533 | 197 | 109 | 9 | 12 | 197 | 6 | 195 | 1.99e-14 | 75.5 |
MS.gene93027.t1 | MTR_7g060470 | 25.359 | 418 | 234 | 17 | 14 | 406 | 2 | 366 | 2.04e-14 | 75.1 |
MS.gene93027.t1 | MTR_3g107100 | 28.866 | 194 | 121 | 8 | 12 | 196 | 8 | 193 | 2.57e-14 | 74.7 |
MS.gene93027.t1 | MTR_3g023470 | 36.879 | 141 | 77 | 7 | 12 | 149 | 12 | 143 | 4.13e-14 | 73.9 |
MS.gene93027.t1 | MTR_3g082890 | 32.727 | 220 | 126 | 10 | 1 | 207 | 1 | 211 | 4.41e-14 | 74.3 |
MS.gene93027.t1 | MTR_7g033945 | 34.286 | 175 | 98 | 9 | 9 | 174 | 5 | 171 | 7.48e-14 | 70.1 |
MS.gene93027.t1 | MTR_2g007500 | 33.333 | 195 | 107 | 8 | 9 | 196 | 8 | 186 | 9.73e-14 | 72.4 |
MS.gene93027.t1 | MTR_3g095600 | 31.441 | 229 | 120 | 8 | 15 | 231 | 4 | 207 | 1.00e-13 | 72.0 |
MS.gene93027.t1 | MTR_7g034110 | 32.487 | 197 | 114 | 8 | 15 | 199 | 11 | 200 | 1.72e-13 | 71.6 |
MS.gene93027.t1 | MTR_1g090900 | 36.416 | 173 | 104 | 5 | 12 | 183 | 8 | 175 | 1.91e-13 | 69.3 |
MS.gene93027.t1 | MTR_8g014180 | 59.322 | 59 | 21 | 2 | 1 | 57 | 1 | 58 | 2.17e-13 | 65.1 |
MS.gene93027.t1 | MTR_7g114710 | 29.317 | 249 | 142 | 10 | 15 | 242 | 13 | 248 | 3.00e-13 | 71.2 |
MS.gene93027.t1 | MTR_1g085120 | 32.632 | 190 | 109 | 9 | 14 | 193 | 178 | 358 | 3.39e-13 | 71.6 |
MS.gene93027.t1 | MTR_5g045510 | 32.086 | 187 | 114 | 8 | 15 | 195 | 12 | 191 | 3.46e-13 | 71.2 |
MS.gene93027.t1 | MTR_3g040700 | 23.618 | 398 | 229 | 13 | 5 | 391 | 33 | 366 | 4.50e-13 | 71.2 |
MS.gene93027.t1 | MTR_5g087940 | 35.057 | 174 | 100 | 7 | 2 | 174 | 13 | 174 | 5.47e-13 | 70.5 |
MS.gene93027.t1 | MTR_2g020170 | 35.897 | 117 | 68 | 4 | 13 | 125 | 20 | 133 | 6.58e-13 | 66.2 |
MS.gene93027.t1 | MTR_1g108820 | 33.505 | 194 | 115 | 8 | 15 | 203 | 8 | 192 | 7.16e-13 | 70.1 |
MS.gene93027.t1 | MTR_3g023630 | 31.016 | 187 | 117 | 8 | 15 | 195 | 8 | 188 | 1.24e-12 | 69.3 |
MS.gene93027.t1 | MTR_3g110010 | 31.606 | 193 | 116 | 8 | 12 | 198 | 10 | 192 | 1.78e-12 | 69.7 |
MS.gene93027.t1 | MTR_2g072720 | 25.641 | 429 | 260 | 15 | 8 | 397 | 32 | 440 | 3.68e-12 | 68.6 |
MS.gene93027.t1 | MTR_4g080590 | 26.107 | 429 | 271 | 14 | 11 | 410 | 19 | 430 | 4.03e-12 | 68.2 |
MS.gene93027.t1 | MTR_1g066830 | 31.579 | 190 | 112 | 9 | 15 | 195 | 8 | 188 | 1.10e-11 | 66.6 |
MS.gene93027.t1 | MTR_3g095640 | 33.553 | 152 | 88 | 6 | 15 | 156 | 18 | 166 | 1.13e-11 | 63.5 |
MS.gene93027.t1 | MTR_7g032370 | 32.117 | 137 | 85 | 3 | 303 | 432 | 217 | 352 | 1.33e-11 | 66.2 |
MS.gene93027.t1 | MTR_7g032370 | 31.461 | 178 | 105 | 8 | 27 | 196 | 2 | 170 | 8.70e-11 | 63.5 |
MS.gene93027.t1 | MTR_1g095750 | 44.048 | 84 | 42 | 3 | 3 | 86 | 34 | 112 | 1.68e-11 | 62.4 |
MS.gene93027.t1 | MTR_2g007360 | 25.676 | 444 | 217 | 18 | 15 | 429 | 12 | 371 | 2.04e-11 | 65.9 |
MS.gene93027.t1 | MTR_3g114200 | 34.752 | 141 | 84 | 5 | 13 | 150 | 17 | 152 | 2.65e-11 | 62.0 |
MS.gene93027.t1 | MTR_6g088705 | 31.527 | 203 | 103 | 10 | 1 | 185 | 1 | 185 | 2.87e-11 | 63.5 |
MS.gene93027.t1 | MTR_3g018680 | 32.973 | 185 | 98 | 10 | 2 | 174 | 9 | 179 | 3.00e-11 | 65.5 |
MS.gene93027.t1 | MTR_8g066650 | 34.857 | 175 | 92 | 9 | 7 | 172 | 67 | 228 | 3.88e-11 | 65.1 |
MS.gene93027.t1 | MTR_3g108560 | 31.959 | 194 | 110 | 11 | 12 | 198 | 17 | 195 | 3.91e-11 | 64.3 |
MS.gene93027.t1 | MTR_1g038710 | 33.981 | 206 | 110 | 10 | 13 | 203 | 17 | 211 | 5.65e-11 | 64.7 |
MS.gene93027.t1 | MTR_3g108560 | 31.959 | 194 | 110 | 11 | 12 | 198 | 17 | 195 | 5.77e-11 | 64.3 |
MS.gene93027.t1 | MTR_4g092430 | 37.419 | 155 | 77 | 9 | 7 | 150 | 29 | 174 | 6.35e-11 | 64.7 |
MS.gene93027.t1 | MTR_4g092430 | 37.419 | 155 | 77 | 9 | 7 | 150 | 29 | 174 | 6.66e-11 | 64.3 |
MS.gene93027.t1 | MTR_8g006910 | 32.967 | 182 | 102 | 9 | 2 | 174 | 39 | 209 | 7.58e-11 | 64.3 |
MS.gene93027.t1 | MTR_7g081290 | 33.333 | 123 | 77 | 3 | 1 | 119 | 1 | 122 | 8.50e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93027.t1 | AT5G56560 | 28.571 | 441 | 271 | 17 | 12 | 432 | 2 | 418 | 2.08e-25 | 107 |
MS.gene93027.t1 | AT5G56420 | 26.984 | 441 | 277 | 15 | 14 | 432 | 5 | 422 | 3.22e-25 | 107 |
MS.gene93027.t1 | AT5G56420 | 26.984 | 441 | 277 | 15 | 14 | 432 | 5 | 422 | 3.22e-25 | 107 |
MS.gene93027.t1 | AT5G56420 | 26.984 | 441 | 277 | 15 | 14 | 432 | 5 | 422 | 3.22e-25 | 107 |
MS.gene93027.t1 | AT1G78750 | 24.790 | 476 | 285 | 18 | 2 | 429 | 5 | 455 | 9.40e-25 | 106 |
MS.gene93027.t1 | AT1G78750 | 24.790 | 476 | 285 | 18 | 2 | 429 | 5 | 455 | 9.40e-25 | 106 |
MS.gene93027.t1 | AT5G53840 | 27.373 | 453 | 268 | 19 | 10 | 429 | 13 | 437 | 5.26e-24 | 104 |
MS.gene93027.t1 | AT1G78760 | 25.855 | 468 | 276 | 22 | 7 | 433 | 8 | 445 | 4.41e-21 | 95.5 |
MS.gene93027.t1 | AT1G69630 | 26.166 | 493 | 248 | 23 | 3 | 429 | 6 | 448 | 6.78e-21 | 95.1 |
MS.gene93027.t1 | AT1G16930 | 25.367 | 477 | 283 | 21 | 1 | 432 | 1 | 449 | 1.96e-20 | 93.6 |
MS.gene93027.t1 | AT1G16930 | 25.367 | 477 | 283 | 21 | 1 | 432 | 1 | 449 | 1.96e-20 | 93.6 |
MS.gene93027.t1 | AT1G16930 | 25.367 | 477 | 283 | 21 | 1 | 432 | 1 | 449 | 1.96e-20 | 93.6 |
MS.gene93027.t1 | AT4G26340 | 27.130 | 446 | 269 | 19 | 15 | 432 | 2 | 419 | 2.62e-20 | 93.2 |
MS.gene93027.t1 | AT3G50710 | 27.273 | 451 | 270 | 22 | 15 | 432 | 2 | 427 | 5.85e-20 | 92.0 |
MS.gene93027.t1 | AT2G26030 | 27.790 | 457 | 271 | 21 | 15 | 429 | 4 | 443 | 6.71e-20 | 92.0 |
MS.gene93027.t1 | AT4G10400 | 27.419 | 434 | 271 | 17 | 15 | 431 | 2 | 408 | 7.51e-20 | 91.7 |
MS.gene93027.t1 | AT4G10400 | 27.419 | 434 | 271 | 17 | 15 | 431 | 2 | 408 | 7.51e-20 | 91.7 |
MS.gene93027.t1 | AT4G10400 | 27.419 | 434 | 271 | 17 | 15 | 431 | 2 | 408 | 7.51e-20 | 91.7 |
MS.gene93027.t1 | AT2G26030 | 28.105 | 459 | 262 | 22 | 15 | 429 | 4 | 438 | 1.02e-19 | 91.3 |
MS.gene93027.t1 | AT2G26030 | 28.105 | 459 | 262 | 22 | 15 | 429 | 4 | 438 | 1.02e-19 | 91.3 |
MS.gene93027.t1 | AT4G13985 | 26.078 | 464 | 276 | 18 | 11 | 429 | 15 | 456 | 4.47e-19 | 89.7 |
MS.gene93027.t1 | AT5G50270 | 28.469 | 418 | 241 | 18 | 15 | 399 | 2 | 394 | 4.52e-19 | 89.4 |
MS.gene93027.t1 | AT3G59200 | 32.821 | 195 | 113 | 7 | 15 | 197 | 7 | 195 | 1.33e-18 | 87.4 |
MS.gene93027.t1 | AT3G58920 | 27.651 | 481 | 271 | 20 | 15 | 432 | 2 | 468 | 1.52e-18 | 88.2 |
MS.gene93027.t1 | AT3G59200 | 32.821 | 195 | 113 | 7 | 15 | 197 | 7 | 195 | 4.40e-18 | 87.0 |
MS.gene93027.t1 | AT4G00160 | 29.854 | 412 | 243 | 18 | 5 | 391 | 6 | 396 | 5.95e-18 | 86.3 |
MS.gene93027.t1 | AT5G44950 | 25.893 | 448 | 279 | 17 | 15 | 427 | 4 | 433 | 3.05e-17 | 84.0 |
MS.gene93027.t1 | AT5G56400 | 26.256 | 438 | 288 | 15 | 15 | 432 | 33 | 455 | 3.99e-17 | 83.6 |
MS.gene93027.t1 | AT1G32375 | 29.204 | 452 | 255 | 26 | 15 | 432 | 2 | 422 | 4.72e-17 | 83.2 |
MS.gene93027.t1 | AT1G32375 | 29.204 | 452 | 255 | 26 | 15 | 432 | 2 | 422 | 4.72e-17 | 83.2 |
MS.gene93027.t1 | AT1G51370 | 25.942 | 451 | 265 | 21 | 11 | 427 | 15 | 430 | 8.80e-17 | 82.4 |
MS.gene93027.t1 | AT5G22700 | 24.819 | 415 | 270 | 15 | 4 | 409 | 32 | 413 | 1.40e-16 | 82.0 |
MS.gene93027.t1 | AT5G56820 | 26.638 | 458 | 272 | 20 | 1 | 429 | 1 | 423 | 2.11e-16 | 81.3 |
MS.gene93027.t1 | AT5G22660 | 25.840 | 476 | 273 | 22 | 1 | 429 | 1 | 443 | 2.19e-16 | 81.3 |
MS.gene93027.t1 | AT3G49150 | 30.000 | 220 | 136 | 9 | 13 | 223 | 14 | 224 | 2.80e-16 | 81.3 |
MS.gene93027.t1 | AT5G60610 | 26.225 | 408 | 249 | 18 | 15 | 396 | 2 | 383 | 3.18e-16 | 80.5 |
MS.gene93027.t1 | AT5G60610 | 26.225 | 408 | 249 | 18 | 15 | 396 | 2 | 383 | 3.18e-16 | 80.5 |
MS.gene93027.t1 | AT5G22610 | 24.123 | 456 | 298 | 17 | 1 | 430 | 1 | 434 | 3.20e-16 | 80.9 |
MS.gene93027.t1 | AT5G38570 | 25.701 | 428 | 253 | 16 | 15 | 431 | 2 | 375 | 3.66e-16 | 80.1 |
MS.gene93027.t1 | AT5G56690 | 30.208 | 192 | 119 | 7 | 17 | 198 | 4 | 190 | 5.10e-16 | 80.1 |
MS.gene93027.t1 | AT4G09920 | 28.315 | 279 | 164 | 12 | 15 | 269 | 2 | 268 | 1.32e-15 | 77.4 |
MS.gene93027.t1 | AT4G09920 | 28.315 | 279 | 164 | 12 | 15 | 269 | 2 | 268 | 1.32e-15 | 77.4 |
MS.gene93027.t1 | AT4G09920 | 28.315 | 279 | 164 | 12 | 15 | 269 | 2 | 268 | 1.32e-15 | 77.4 |
MS.gene93027.t1 | AT5G22610 | 23.237 | 482 | 300 | 17 | 1 | 430 | 1 | 464 | 1.52e-15 | 79.0 |
MS.gene93027.t1 | AT3G42770 | 27.609 | 460 | 238 | 21 | 17 | 424 | 1 | 417 | 1.84e-15 | 79.0 |
MS.gene93027.t1 | AT4G09920 | 27.551 | 294 | 173 | 13 | 15 | 280 | 2 | 283 | 2.18e-15 | 77.0 |
MS.gene93027.t1 | AT4G09920 | 27.551 | 294 | 173 | 13 | 15 | 280 | 2 | 283 | 2.18e-15 | 77.0 |
MS.gene93027.t1 | AT1G66290 | 26.981 | 467 | 252 | 26 | 11 | 429 | 25 | 450 | 2.59e-15 | 78.2 |
MS.gene93027.t1 | AT2G29930 | 25.514 | 486 | 274 | 23 | 5 | 431 | 2 | 458 | 2.89e-15 | 78.2 |
MS.gene93027.t1 | AT2G29930 | 25.514 | 486 | 274 | 23 | 5 | 431 | 2 | 458 | 2.89e-15 | 78.2 |
MS.gene93027.t1 | AT5G41840 | 31.169 | 231 | 133 | 13 | 15 | 224 | 14 | 239 | 6.66e-15 | 77.0 |
MS.gene93027.t1 | AT4G14103 | 28.383 | 303 | 163 | 15 | 11 | 282 | 4 | 283 | 9.05e-15 | 75.9 |
MS.gene93027.t1 | AT4G14103 | 28.383 | 303 | 163 | 15 | 11 | 282 | 4 | 283 | 9.05e-15 | 75.9 |
MS.gene93027.t1 | AT3G59190 | 28.214 | 280 | 158 | 12 | 5 | 253 | 2 | 269 | 9.98e-15 | 76.6 |
MS.gene93027.t1 | AT3G59190 | 29.952 | 207 | 122 | 8 | 5 | 195 | 2 | 201 | 1.07e-14 | 75.9 |
MS.gene93027.t1 | AT3G52680 | 26.526 | 475 | 268 | 20 | 5 | 434 | 11 | 449 | 1.14e-14 | 76.3 |
MS.gene93027.t1 | AT1G66310 | 28.118 | 473 | 257 | 27 | 2 | 429 | 5 | 439 | 1.55e-14 | 75.9 |
MS.gene93027.t1 | AT5G22700 | 31.472 | 197 | 121 | 6 | 4 | 195 | 32 | 219 | 1.73e-14 | 75.9 |
MS.gene93027.t1 | AT1G80470 | 25.636 | 472 | 281 | 24 | 1 | 435 | 1 | 439 | 1.82e-14 | 75.5 |
MS.gene93027.t1 | AT1G06630 | 27.128 | 376 | 210 | 16 | 7 | 342 | 4 | 355 | 1.93e-14 | 74.7 |
MS.gene93027.t1 | AT1G06630 | 27.128 | 376 | 210 | 16 | 7 | 342 | 4 | 355 | 1.93e-14 | 74.7 |
MS.gene93027.t1 | AT5G22700 | 32.796 | 186 | 111 | 6 | 15 | 195 | 6 | 182 | 2.70e-14 | 75.1 |
MS.gene93027.t1 | AT5G22700 | 32.796 | 186 | 111 | 6 | 15 | 195 | 6 | 182 | 2.70e-14 | 75.1 |
MS.gene93027.t1 | AT5G22700 | 32.796 | 186 | 111 | 6 | 15 | 195 | 6 | 182 | 2.70e-14 | 75.1 |
MS.gene93027.t1 | AT5G22700 | 32.796 | 186 | 111 | 6 | 15 | 195 | 6 | 182 | 2.70e-14 | 75.1 |
MS.gene93027.t1 | AT1G13780 | 25.346 | 434 | 254 | 18 | 15 | 399 | 10 | 422 | 2.99e-14 | 74.7 |
MS.gene93027.t1 | AT1G55660 | 32.474 | 194 | 115 | 9 | 15 | 198 | 53 | 240 | 4.68e-14 | 73.6 |
MS.gene93027.t1 | AT1G06630 | 26.913 | 379 | 213 | 16 | 7 | 345 | 4 | 358 | 4.73e-14 | 73.9 |
MS.gene93027.t1 | AT1G06630 | 26.913 | 379 | 213 | 16 | 7 | 345 | 4 | 358 | 4.73e-14 | 73.9 |
MS.gene93027.t1 | AT1G06630 | 26.913 | 379 | 213 | 16 | 7 | 345 | 4 | 358 | 4.73e-14 | 73.9 |
MS.gene93027.t1 | AT1G06630 | 26.913 | 379 | 213 | 16 | 7 | 345 | 4 | 358 | 4.73e-14 | 73.9 |
MS.gene93027.t1 | AT5G50270 | 33.482 | 224 | 115 | 11 | 15 | 223 | 2 | 206 | 4.73e-14 | 73.2 |
MS.gene93027.t1 | AT1G06630 | 26.913 | 379 | 213 | 16 | 7 | 345 | 13 | 367 | 5.54e-14 | 73.9 |
MS.gene93027.t1 | AT1G55660 | 32.474 | 194 | 115 | 9 | 15 | 198 | 53 | 240 | 7.52e-14 | 73.9 |
MS.gene93027.t1 | AT1G06630 | 27.078 | 373 | 208 | 16 | 7 | 339 | 4 | 352 | 9.55e-14 | 73.6 |
MS.gene93027.t1 | AT4G14096 | 28.102 | 274 | 147 | 14 | 15 | 257 | 8 | 262 | 1.79e-13 | 72.4 |
MS.gene93027.t1 | AT4G14096 | 28.102 | 274 | 147 | 14 | 15 | 257 | 8 | 262 | 1.79e-13 | 72.4 |
MS.gene93027.t1 | AT4G15060 | 30.570 | 193 | 119 | 8 | 12 | 195 | 23 | 209 | 2.96e-13 | 71.6 |
MS.gene93027.t1 | AT5G18780 | 24.726 | 457 | 287 | 15 | 8 | 429 | 4 | 438 | 4.54e-13 | 71.2 |
MS.gene93027.t1 | AT5G18780 | 24.726 | 457 | 287 | 15 | 8 | 429 | 4 | 438 | 4.54e-13 | 71.2 |
MS.gene93027.t1 | AT5G56390 | 29.060 | 468 | 236 | 28 | 15 | 431 | 2 | 424 | 5.34e-13 | 70.9 |
MS.gene93027.t1 | AT5G35995 | 29.614 | 233 | 141 | 11 | 15 | 239 | 5 | 222 | 6.71e-13 | 70.9 |
MS.gene93027.t1 | AT5G35995 | 29.614 | 233 | 141 | 11 | 15 | 239 | 5 | 222 | 6.71e-13 | 70.9 |
MS.gene93027.t1 | AT5G56560 | 33.505 | 194 | 112 | 7 | 12 | 198 | 2 | 185 | 1.01e-12 | 70.5 |
MS.gene93027.t1 | AT4G13960 | 31.915 | 235 | 132 | 9 | 15 | 235 | 2 | 222 | 1.03e-12 | 70.1 |
MS.gene93027.t1 | AT4G13960 | 31.915 | 235 | 132 | 9 | 15 | 235 | 2 | 222 | 1.03e-12 | 70.1 |
MS.gene93027.t1 | AT4G00320 | 28.261 | 230 | 135 | 11 | 15 | 223 | 13 | 233 | 1.93e-12 | 69.3 |
MS.gene93027.t1 | AT1G06630 | 26.837 | 313 | 177 | 13 | 7 | 286 | 4 | 297 | 2.86e-12 | 67.8 |
MS.gene93027.t1 | AT3G58980 | 26.383 | 470 | 261 | 24 | 15 | 430 | 2 | 440 | 3.43e-12 | 68.9 |
MS.gene93027.t1 | AT3G52680 | 31.658 | 199 | 124 | 5 | 5 | 197 | 11 | 203 | 4.19e-12 | 67.8 |
MS.gene93027.t1 | AT5G41630 | 30.151 | 199 | 116 | 7 | 15 | 195 | 12 | 205 | 5.17e-12 | 67.8 |
MS.gene93027.t1 | AT3G58860 | 30.151 | 199 | 121 | 8 | 11 | 197 | 3 | 195 | 6.44e-12 | 67.8 |
MS.gene93027.t1 | AT5G18780 | 29.386 | 228 | 143 | 7 | 8 | 228 | 4 | 220 | 8.84e-12 | 67.0 |
MS.gene93027.t1 | AT5G18780 | 29.386 | 228 | 143 | 7 | 8 | 228 | 4 | 220 | 8.84e-12 | 67.0 |
MS.gene93027.t1 | AT3G59210 | 29.091 | 275 | 149 | 11 | 14 | 257 | 6 | 265 | 1.71e-11 | 66.2 |
MS.gene93027.t1 | AT3G59210 | 29.091 | 275 | 149 | 11 | 14 | 257 | 6 | 265 | 1.71e-11 | 66.2 |
MS.gene93027.t1 | AT3G59210 | 29.091 | 275 | 149 | 11 | 14 | 257 | 6 | 265 | 1.71e-11 | 66.2 |
MS.gene93027.t1 | AT3G59210 | 29.091 | 275 | 149 | 11 | 14 | 257 | 6 | 265 | 1.71e-11 | 66.2 |
MS.gene93027.t1 | AT3G59210 | 29.091 | 275 | 149 | 11 | 14 | 257 | 6 | 265 | 1.71e-11 | 66.2 |
MS.gene93027.t1 | AT3G59230 | 29.268 | 205 | 126 | 8 | 7 | 195 | 4 | 205 | 3.81e-11 | 65.5 |
MS.gene93027.t1 | AT5G22660 | 31.000 | 200 | 122 | 7 | 1 | 195 | 1 | 189 | 4.21e-11 | 64.3 |
MS.gene93027.t1 | AT3G58880 | 24.829 | 439 | 256 | 18 | 15 | 401 | 3 | 419 | 6.00e-11 | 64.7 |
Find 104 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACCACAGCTCAAACATTT+TGG | 0.159569 | 8.2:+32300185 | None:intergenic |
TGAGAGTTTGCACCTTAATT+TGG | 0.204820 | 8.2:+32298427 | None:intergenic |
CGTTGGCAACTTTCATAGTA+TGG | 0.291851 | 8.2:-32299232 | MS.gene93027:CDS |
CCAGCTCCGTCTCCAAATTA+AGG | 0.329783 | 8.2:-32298439 | None:intergenic |
CTGCTTCAACTCGAATCTTC+TGG | 0.334716 | 8.2:-32298915 | MS.gene93027:CDS |
CCAAGTGAAATTGTGATTGA+TGG | 0.346823 | 8.2:+32299296 | None:intergenic |
CTCACAGGTGGCGACACCTC+TGG | 0.355297 | 8.2:-32300359 | MS.gene93027:CDS |
GAGAACGTTGAACTTTGATA+TGG | 0.358111 | 8.2:+32299496 | None:intergenic |
GGAAGAGGTTGTTGAGAATA+GGG | 0.378113 | 8.2:+32299160 | None:intergenic |
AACCATCACCGTTGAGAACT+TGG | 0.381357 | 8.2:-32298705 | MS.gene93027:CDS |
TTGGGAGGAAGGAGAGTATA+TGG | 0.397738 | 8.2:+32300415 | None:intergenic |
AACTCTGGATAATTTAGAAC+AGG | 0.400095 | 8.2:+32298971 | None:intergenic |
CCTTAATTTGGAGACGGAGC+TGG | 0.403747 | 8.2:+32298439 | None:intergenic |
TTATGAGAACTTGAAGCATA+TGG | 0.413834 | 8.2:+32298873 | None:intergenic |
ATTCACATTGAAGGATATCA+AGG | 0.416044 | 8.2:-32298631 | MS.gene93027:CDS |
TGGAAGAGGTTGTTGAGAAT+AGG | 0.418982 | 8.2:+32299159 | None:intergenic |
CTGACTTATATTCACATTGA+AGG | 0.419150 | 8.2:-32298640 | MS.gene93027:CDS |
CTGTGGTTCCGTGCTGCCAC+TGG | 0.421703 | 8.2:-32300171 | MS.gene93027:CDS |
GGACCGATTGAGTAGTTTAC+CGG | 0.425932 | 8.2:-32300451 | MS.gene93027:CDS |
CAGTTGATGAAGAGGGAAGG+AGG | 0.429220 | 8.2:+32300090 | None:intergenic |
TGAAATAAATTGCGAAACTC+TGG | 0.431497 | 8.2:+32298956 | None:intergenic |
CGTTCAAAGATAAGTCTTCA+AGG | 0.436000 | 8.2:+32299361 | None:intergenic |
ATTGATGGATTTCAAGCTCT+TGG | 0.437125 | 8.2:+32299311 | None:intergenic |
ACACCTCTGGGAGCATCTCC+AGG | 0.444775 | 8.2:-32300346 | MS.gene93027:CDS |
GGAGAGTATATGGCATAGAA+TGG | 0.444991 | 8.2:+32300425 | None:intergenic |
ACGGAACTTACGAATGTTGC+GGG | 0.449382 | 8.2:+32300230 | None:intergenic |
CCATCAATCACAATTTCACT+TGG | 0.452529 | 8.2:-32299296 | MS.gene93027:CDS |
GCCAACGATGCCCATGGCAT+GGG | 0.458840 | 8.2:+32299248 | None:intergenic |
TACGAATGTTGCGGGATCTA+CGG | 0.459610 | 8.2:+32300238 | None:intergenic |
CAGAAGATTCGAGTTGAAGC+AGG | 0.459725 | 8.2:+32298916 | None:intergenic |
CTTAATTTGGAGACGGAGCT+GGG | 0.467049 | 8.2:+32298440 | None:intergenic |
TCACAGGTGGCGACACCTCT+GGG | 0.473183 | 8.2:-32300358 | MS.gene93027:CDS |
AGTTGATGAAGAGGGAAGGA+GGG | 0.475091 | 8.2:+32300091 | None:intergenic |
CCCCATGCCATGGGCATCGT+TGG | 0.477463 | 8.2:-32299249 | MS.gene93027:CDS |
AGATCCAGAGTTTCTAGCAC+TGG | 0.481633 | 8.2:+32299393 | None:intergenic |
AGGTCTTCGACTTTGACGAC+TGG | 0.482564 | 8.2:-32300326 | MS.gene93027:CDS |
TCGCATGACACAGAACCCTT+TGG | 0.490917 | 8.2:+32298475 | None:intergenic |
CTTCAATGTGAATATAAGTC+AGG | 0.492415 | 8.2:+32298641 | None:intergenic |
ATGTCAAATGACGCGAAAGT+AGG | 0.492783 | 8.2:+32299112 | None:intergenic |
TGCCAACGATGCCCATGGCA+TGG | 0.494789 | 8.2:+32299247 | None:intergenic |
TTTCAAGCTCTTGGAGCTGA+AGG | 0.498482 | 8.2:+32299320 | None:intergenic |
ACCGTTGAGAACTTGGGAGC+TGG | 0.499303 | 8.2:-32298698 | MS.gene93027:CDS |
TTGTGACGGAGGTTCGAGTT+GGG | 0.515633 | 8.2:+32300397 | None:intergenic |
TTCTTGAAGGTGGGGACCAG+TGG | 0.516341 | 8.2:+32300155 | None:intergenic |
GAGAGAGAGTTCTTGAAGGT+GGG | 0.520309 | 8.2:+32300146 | None:intergenic |
CGGTGAGAGAGAGTTCTTGA+AGG | 0.520852 | 8.2:+32300142 | None:intergenic |
CTGCCCAGTGCTAGAAACTC+TGG | 0.527934 | 8.2:-32299397 | MS.gene93027:CDS |
AGTTTGAGTCTCTTGAGTGA+TGG | 0.537670 | 8.2:+32299462 | None:intergenic |
CAGAGTTTCTAGCACTGGGC+AGG | 0.539705 | 8.2:+32299398 | None:intergenic |
TGTTAATACTGCAGTCTGCA+TGG | 0.541343 | 8.2:-32299528 | MS.gene93027:intron |
GGAGGTTCGAGTTGGGAGGA+AGG | 0.547871 | 8.2:+32300404 | None:intergenic |
TTCGCGTCATTTGACATCAA+AGG | 0.548380 | 8.2:-32299106 | MS.gene93027:intron |
CCGTCTCAACTGTGATTACC+CGG | 0.548978 | 8.2:-32300211 | MS.gene93027:CDS |
TTGCAGTTGATGAAGAGGGA+AGG | 0.550454 | 8.2:+32300087 | None:intergenic |
TCCCAAGTTCTCAACGGTGA+TGG | 0.551903 | 8.2:+32298703 | None:intergenic |
AGATTGACTGACATACCAAA+GGG | 0.555026 | 8.2:-32298490 | MS.gene93027:CDS |
ATTGTGACGGAGGTTCGAGT+TGG | 0.555423 | 8.2:+32300396 | None:intergenic |
GCAACAACCTCGTTTCCCTC+CGG | 0.555731 | 8.2:-32300068 | MS.gene93027:intron |
AAGCTCTTGGAGCTGAAGGA+AGG | 0.556513 | 8.2:+32299324 | None:intergenic |
GATATATATCCCCATGCCAT+GGG | 0.557465 | 8.2:-32299258 | MS.gene93027:CDS |
TGAGAGAGAGTTCTTGAAGG+TGG | 0.559302 | 8.2:+32300145 | None:intergenic |
TGATATATATCCCCATGCCA+TGG | 0.559722 | 8.2:-32299259 | MS.gene93027:CDS |
GGTCTTCGACTTTGACGACT+GGG | 0.561876 | 8.2:-32300325 | MS.gene93027:CDS |
AGTCCGGTAAACTACTCAAT+CGG | 0.563071 | 8.2:+32300448 | None:intergenic |
AGAGAGAGTTCTTGAAGGTG+GGG | 0.563610 | 8.2:+32300147 | None:intergenic |
ACCATCACCGTTGAGAACTT+GGG | 0.571797 | 8.2:-32298704 | MS.gene93027:CDS |
TCACTCAAGAGACTCAAACT+TGG | 0.571944 | 8.2:-32299459 | MS.gene93027:CDS |
CTCTTGGAGCTGAAGGAAGG+TGG | 0.572877 | 8.2:+32299327 | None:intergenic |
AGTCGTCAAAGTCGAAGACC+TGG | 0.577295 | 8.2:+32300328 | None:intergenic |
GATCCAGAGTTTCTAGCACT+GGG | 0.579142 | 8.2:+32299394 | None:intergenic |
GGTTGTTGCAGTTGATGAAG+AGG | 0.580839 | 8.2:+32300082 | None:intergenic |
ATCCCAAAATGTTTGAGCTG+TGG | 0.581048 | 8.2:-32300188 | MS.gene93027:CDS |
TTATGACTCTCGTCTCTCAC+AGG | 0.582125 | 8.2:-32300374 | MS.gene93027:CDS |
TGGCGGAGTCAAGCTTGAAA+CGG | 0.583338 | 8.2:-32300491 | MS.gene93027:CDS |
TTTGCACCTTAATTTGGAGA+CGG | 0.584664 | 8.2:+32298433 | None:intergenic |
ACGGCGGAAAGCAGAAGAAG+AGG | 0.584769 | 8.2:-32300472 | MS.gene93027:CDS |
TTGAGTGATGGAAAATGAAG+TGG | 0.593301 | 8.2:+32299474 | None:intergenic |
CAATGTGAATATAAGTCAGG+TGG | 0.596431 | 8.2:+32298644 | None:intergenic |
ATATGGCATAGAATGGAGTC+CGG | 0.596950 | 8.2:+32300432 | None:intergenic |
GTTGTTGCAGTTGATGAAGA+GGG | 0.600653 | 8.2:+32300083 | None:intergenic |
GACAAATTCACTTTCACGTG+AGG | 0.601494 | 8.2:+32299185 | None:intergenic |
GACGAGAGTCATAATTGTGA+CGG | 0.601855 | 8.2:+32300383 | None:intergenic |
AGAAGATTCGAGTTGAAGCA+GGG | 0.608111 | 8.2:+32298917 | None:intergenic |
GAAATCATCGACGTTTAGAA+CGG | 0.609140 | 8.2:+32300122 | None:intergenic |
GACGGAACTTACGAATGTTG+CGG | 0.610282 | 8.2:+32300229 | None:intergenic |
TGACGGAGGTTCGAGTTGGG+AGG | 0.611461 | 8.2:+32300400 | None:intergenic |
AAGATTGACTGACATACCAA+AGG | 0.615806 | 8.2:-32298491 | MS.gene93027:CDS |
CCGGGTAATCACAGTTGAGA+CGG | 0.616919 | 8.2:+32300211 | None:intergenic |
TCCAGCTCCCAAGTTCTCAA+CGG | 0.617102 | 8.2:+32298697 | None:intergenic |
TTTAGAACAGGGGCATGAAG+TGG | 0.619100 | 8.2:+32298983 | None:intergenic |
AAAGTTGCCAACGATGCCCA+TGG | 0.622590 | 8.2:+32299242 | None:intergenic |
GGTGGGGACCAGTGGCAGCA+CGG | 0.627255 | 8.2:+32300163 | None:intergenic |
CCAACGATGCCCATGGCATG+GGG | 0.628812 | 8.2:+32299249 | None:intergenic |
TCTCATAATTAAGAGCAGCA+AGG | 0.629918 | 8.2:-32298858 | MS.gene93027:intron |
TGGCAACTTTCATAGTATGG+TGG | 0.634902 | 8.2:-32299229 | MS.gene93027:CDS |
GTTAGTACCGGAGGGAAACG+AGG | 0.636742 | 8.2:+32300061 | None:intergenic |
AATGTGAATATAAGTCAGGT+GGG | 0.643217 | 8.2:+32298645 | None:intergenic |
CTCTGGATAATTTAGAACAG+GGG | 0.650015 | 8.2:+32298973 | None:intergenic |
CAAACTTGGTGTAGAGACTG+TGG | 0.652029 | 8.2:-32299445 | MS.gene93027:CDS |
ACTCTGGATAATTTAGAACA+GGG | 0.667989 | 8.2:+32298972 | None:intergenic |
TGACTCTCGTCTCTCACAGG+TGG | 0.668779 | 8.2:-32300371 | MS.gene93027:CDS |
CGGAGTCAAGCTTGAAACGG+CGG | 0.680628 | 8.2:-32300488 | MS.gene93027:CDS |
GAGAGTCATAATTGTGACGG+AGG | 0.689058 | 8.2:+32300386 | None:intergenic |
AGACCTGGAGATGCTCCCAG+AGG | 0.734065 | 8.2:+32300343 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATTTATATATGTAGT+TGG | - | chr8.2:32299884-32299903 | MS.gene93027:intron | 10.0% |
!!! | AGTTTAATTTAATCAATATT+TGG | - | chr8.2:32300113-32300132 | MS.gene93027:CDS | 10.0% |
!!! | TATTTTTGTTGATATTTCAA+TGG | - | chr8.2:32300391-32300410 | MS.gene93027:CDS | 15.0% |
!! | GAAAACAAAATCTAAAAATG+AGG | + | chr8.2:32299015-32299034 | None:intergenic | 20.0% |
!!! | AAGGTGAAGTTTTATTTTTA+TGG | - | chr8.2:32299846-32299865 | MS.gene93027:intron | 20.0% |
!!! | ACAAATATATTTTTGAGTTG+TGG | - | chr8.2:32300177-32300196 | MS.gene93027:CDS | 20.0% |
!!! | CCATTTTTTTTATTCATAGT+CGG | - | chr8.2:32298910-32298929 | MS.gene93027:CDS | 20.0% |
!!! | TTTCATTGTTTTTGTTATCT+TGG | + | chr8.2:32299797-32299816 | None:intergenic | 20.0% |
! | AAAATGGAGAGATTGAAATT+AGG | + | chr8.2:32298897-32298916 | None:intergenic | 25.0% |
! | ATAGGTTTGTGAATGAAAAT+AGG | + | chr8.2:32299038-32299057 | None:intergenic | 25.0% |
! | CCGACTATGAATAAAAAAAA+TGG | + | chr8.2:32298913-32298932 | None:intergenic | 25.0% |
! | TAGGTTTGTGAATGAAAATA+GGG | + | chr8.2:32299037-32299056 | None:intergenic | 25.0% |
!! | CATAGCACTACTTTATTTAT+AGG | + | chr8.2:32299056-32299075 | None:intergenic | 25.0% |
!! | TTAATGGTGGAAATGAAATT+TGG | - | chr8.2:32299271-32299290 | MS.gene93027:CDS | 25.0% |
!! | TTCTTTATTTGTTTCAGTGT+TGG | + | chr8.2:32299364-32299383 | None:intergenic | 25.0% |
!!! | AAATACACTTGTTTTAATGG+TGG | - | chr8.2:32299258-32299277 | MS.gene93027:CDS | 25.0% |
!!! | CATTTGCTGAATATATTTTG+CGG | - | chr8.2:32300342-32300361 | MS.gene93027:CDS | 25.0% |
!!! | TCGAAATACACTTGTTTTAA+TGG | - | chr8.2:32299255-32299274 | MS.gene93027:CDS | 25.0% |
AATGTGAATATAAGTCAGGT+GGG | + | chr8.2:32300291-32300310 | None:intergenic | 30.0% | |
ATTCACATTGAAGGATATCA+AGG | - | chr8.2:32300302-32300321 | MS.gene93027:CDS | 30.0% | |
CTGACTTATATTCACATTGA+AGG | - | chr8.2:32300293-32300312 | MS.gene93027:CDS | 30.0% | |
CTTCAATGTGAATATAAGTC+AGG | + | chr8.2:32300295-32300314 | None:intergenic | 30.0% | |
GATTGAAATTAGGTTAGTAC+CGG | + | chr8.2:32298887-32298906 | None:intergenic | 30.0% | |
TGAAATAAATTGCGAAACTC+TGG | + | chr8.2:32299980-32299999 | None:intergenic | 30.0% | |
TTATGAGAACTTGAAGCATA+TGG | + | chr8.2:32300063-32300082 | None:intergenic | 30.0% | |
! | AAACTTTTGTCGTAAAAGTG+AGG | + | chr8.2:32298636-32298655 | None:intergenic | 30.0% |
! | AACTCTGGATAATTTAGAAC+AGG | + | chr8.2:32299965-32299984 | None:intergenic | 30.0% |
! | ACTCTGGATAATTTAGAACA+GGG | + | chr8.2:32299964-32299983 | None:intergenic | 30.0% |
! | TTTTTATTCATAGTCGGACT+AGG | - | chr8.2:32298916-32298935 | MS.gene93027:CDS | 30.0% |
!! | AATGAGGAAAGTACCAAATT+AGG | + | chr8.2:32298999-32299018 | None:intergenic | 30.0% |
!! | ATGAGGAAAGTACCAAATTA+GGG | + | chr8.2:32298998-32299017 | None:intergenic | 30.0% |
!! | TGTTTTTGTTATCTTGGAAG+AGG | + | chr8.2:32299791-32299810 | None:intergenic | 30.0% |
!!! | TATATTTTTGAGTTGTGGCA+CGG | - | chr8.2:32300182-32300201 | MS.gene93027:CDS | 30.0% |
AAGATTGACTGACATACCAA+AGG | - | chr8.2:32300442-32300461 | MS.gene93027:CDS | 35.0% | |
AGATTGACTGACATACCAAA+GGG | - | chr8.2:32300443-32300462 | MS.gene93027:CDS | 35.0% | |
ATGTACACGATAACAAGTGA+TGG | + | chr8.2:32299923-32299942 | None:intergenic | 35.0% | |
CAATGTGAATATAAGTCAGG+TGG | + | chr8.2:32300292-32300311 | None:intergenic | 35.0% | |
CCAAGTGAAATTGTGATTGA+TGG | + | chr8.2:32299640-32299659 | None:intergenic | 35.0% | |
CCATCAATCACAATTTCACT+TGG | - | chr8.2:32299637-32299656 | MS.gene93027:intron | 35.0% | |
CGTTCAAAGATAAGTCTTCA+AGG | + | chr8.2:32299575-32299594 | None:intergenic | 35.0% | |
CTGCAGTATTAACAAAAGAC+AGG | + | chr8.2:32299399-32299418 | None:intergenic | 35.0% | |
GAAATCATCGACGTTTAGAA+CGG | + | chr8.2:32298814-32298833 | None:intergenic | 35.0% | |
GAGAACGTTGAACTTTGATA+TGG | + | chr8.2:32299440-32299459 | None:intergenic | 35.0% | |
GGGAACAAGAGATGAAATTA+TGG | + | chr8.2:32299332-32299351 | None:intergenic | 35.0% | |
TCTCATAATTAAGAGCAGCA+AGG | - | chr8.2:32300075-32300094 | MS.gene93027:CDS | 35.0% | |
TGTTAGACAAAGCCCTAATT+TGG | - | chr8.2:32298983-32299002 | MS.gene93027:CDS | 35.0% | |
! | AACCACAGCTCAAACATTTT+GGG | + | chr8.2:32298750-32298769 | None:intergenic | 35.0% |
! | CTCTGGATAATTTAGAACAG+GGG | + | chr8.2:32299963-32299982 | None:intergenic | 35.0% |
! | GCTGAATATATTTTGCGGAA+CGG | - | chr8.2:32300347-32300366 | MS.gene93027:CDS | 35.0% |
! | TTCAGTGTTGGAAGTAGAAA+GGG | + | chr8.2:32299352-32299371 | None:intergenic | 35.0% |
! | TTGAGTGATGGAAAATGAAG+TGG | + | chr8.2:32299462-32299481 | None:intergenic | 35.0% |
! | TTTCAGTGTTGGAAGTAGAA+AGG | + | chr8.2:32299353-32299372 | None:intergenic | 35.0% |
!! | ATTGATGGATTTCAAGCTCT+TGG | + | chr8.2:32299625-32299644 | None:intergenic | 35.0% |
AACTCTACCTCTATGAAGCA+CGG | + | chr8.2:32299191-32299210 | None:intergenic | 40.0% | |
ACATGCACAAGCAAGCAAAA+TGG | + | chr8.2:32298966-32298985 | None:intergenic | 40.0% | |
AGTCCGGTAAACTACTCAAT+CGG | + | chr8.2:32298488-32298507 | None:intergenic | 40.0% | |
AGTTTGAGTCTCTTGAGTGA+TGG | + | chr8.2:32299474-32299493 | None:intergenic | 40.0% | |
ATATGGCATAGAATGGAGTC+CGG | + | chr8.2:32298504-32298523 | None:intergenic | 40.0% | |
ATCCCAAAATGTTTGAGCTG+TGG | - | chr8.2:32298745-32298764 | MS.gene93027:intron | 40.0% | |
ATGTCAAATGACGCGAAAGT+AGG | + | chr8.2:32299824-32299843 | None:intergenic | 40.0% | |
CGTTGGCAACTTTCATAGTA+TGG | - | chr8.2:32299701-32299720 | MS.gene93027:intron | 40.0% | |
GACAAATTCACTTTCACGTG+AGG | + | chr8.2:32299751-32299770 | None:intergenic | 40.0% | |
GACGAGAGTCATAATTGTGA+CGG | + | chr8.2:32298553-32298572 | None:intergenic | 40.0% | |
GATATATATCCCCATGCCAT+GGG | - | chr8.2:32299675-32299694 | MS.gene93027:intron | 40.0% | |
GGAAGAGGTTGTTGAGAATA+GGG | + | chr8.2:32299776-32299795 | None:intergenic | 40.0% | |
TCACTCAAGAGACTCAAACT+TGG | - | chr8.2:32299474-32299493 | MS.gene93027:CDS | 40.0% | |
TGATATATATCCCCATGCCA+TGG | - | chr8.2:32299674-32299693 | MS.gene93027:intron | 40.0% | |
TGGAAGAGGTTGTTGAGAAT+AGG | + | chr8.2:32299777-32299796 | None:intergenic | 40.0% | |
TGGCAACTTTCATAGTATGG+TGG | - | chr8.2:32299704-32299723 | MS.gene93027:intron | 40.0% | |
TGTTAATACTGCAGTCTGCA+TGG | - | chr8.2:32299405-32299424 | MS.gene93027:CDS | 40.0% | |
TTCGCGTCATTTGACATCAA+AGG | - | chr8.2:32299827-32299846 | MS.gene93027:intron | 40.0% | |
! | GAAATTAGGTTAGTACCGGA+GGG | + | chr8.2:32298883-32298902 | None:intergenic | 40.0% |
! | GAACCACAGCTCAAACATTT+TGG | + | chr8.2:32298751-32298770 | None:intergenic | 40.0% |
! | GGAGAGTATATGGCATAGAA+TGG | + | chr8.2:32298511-32298530 | None:intergenic | 40.0% |
! | TATGAAGCACTTACACGACA+TGG | - | chr8.2:32299072-32299091 | MS.gene93027:intron | 40.0% |
! | TGAAATTAGGTTAGTACCGG+AGG | + | chr8.2:32298884-32298903 | None:intergenic | 40.0% |
!! | AGAAGATTCGAGTTGAAGCA+GGG | + | chr8.2:32300019-32300038 | None:intergenic | 40.0% |
!! | GTTGTTGCAGTTGATGAAGA+GGG | + | chr8.2:32298853-32298872 | None:intergenic | 40.0% |
!!! | AGCTCAAACATTTTGGGATC+CGG | + | chr8.2:32298744-32298763 | None:intergenic | 40.0% |
AACCATCACCGTTGAGAACT+TGG | - | chr8.2:32300228-32300247 | MS.gene93027:CDS | 45.0% | |
ACACAGACACTCTTCGGATT+AGG | + | chr8.2:32299109-32299128 | None:intergenic | 45.0% | |
ACCATCACCGTTGAGAACTT+GGG | - | chr8.2:32300229-32300248 | MS.gene93027:CDS | 45.0% | |
ACGGAACTTACGAATGTTGC+GGG | + | chr8.2:32298706-32298725 | None:intergenic | 45.0% | |
AGAGAGAGTTCTTGAAGGTG+GGG | + | chr8.2:32298789-32298808 | None:intergenic | 45.0% | |
CTGCTTCAACTCGAATCTTC+TGG | - | chr8.2:32300018-32300037 | MS.gene93027:intron | 45.0% | |
GACGGAACTTACGAATGTTG+CGG | + | chr8.2:32298707-32298726 | None:intergenic | 45.0% | |
GAGAGAGAGTTCTTGAAGGT+GGG | + | chr8.2:32298790-32298809 | None:intergenic | 45.0% | |
GAGAGTCATAATTGTGACGG+AGG | + | chr8.2:32298550-32298569 | None:intergenic | 45.0% | |
GATTAAGTGTGTCCTGGTGT+CGG | + | chr8.2:32299158-32299177 | None:intergenic | 45.0% | |
GGACCGATTGAGTAGTTTAC+CGG | - | chr8.2:32298482-32298501 | MS.gene93027:CDS | 45.0% | |
GTTCCTCCTACAAGCAACAA+TGG | + | chr8.2:32300211-32300230 | None:intergenic | 45.0% | |
TACGAATGTTGCGGGATCTA+CGG | + | chr8.2:32298698-32298717 | None:intergenic | 45.0% | |
TATGAAGCACGGACACTCTT+CGG | + | chr8.2:32299180-32299199 | None:intergenic | 45.0% | |
TCTTCGGATTAAGTGTGTCC+TGG | + | chr8.2:32299164-32299183 | None:intergenic | 45.0% | |
TGAGAGAGAGTTCTTGAAGG+TGG | + | chr8.2:32298791-32298810 | None:intergenic | 45.0% | |
TTATGACTCTCGTCTCTCAC+AGG | - | chr8.2:32298559-32298578 | MS.gene93027:CDS | 45.0% | |
TTTCAAGCTCTTGGAGCTGA+AGG | + | chr8.2:32299616-32299635 | None:intergenic | 45.0% | |
! | TGTCCATTGTTGCTTGTAGG+AGG | - | chr8.2:32300205-32300224 | MS.gene93027:CDS | 45.0% |
! | TTGGGAGGAAGGAGAGTATA+TGG | + | chr8.2:32298521-32298540 | None:intergenic | 45.0% |
! | TTTAGAACAGGGGCATGAAG+TGG | + | chr8.2:32299953-32299972 | None:intergenic | 45.0% |
!! | AATCCGAAGAGTGTCTGTGT+CGG | - | chr8.2:32299109-32299128 | MS.gene93027:CDS | 45.0% |
!! | AGATCCAGAGTTTCTAGCAC+TGG | + | chr8.2:32299543-32299562 | None:intergenic | 45.0% |
!! | AGTTGATGAAGAGGGAAGGA+GGG | + | chr8.2:32298845-32298864 | None:intergenic | 45.0% |
!! | CAAACTTGGTGTAGAGACTG+TGG | - | chr8.2:32299488-32299507 | MS.gene93027:CDS | 45.0% |
!! | CAGAAGATTCGAGTTGAAGC+AGG | + | chr8.2:32300020-32300039 | None:intergenic | 45.0% |
!! | GATCCAGAGTTTCTAGCACT+GGG | + | chr8.2:32299542-32299561 | None:intergenic | 45.0% |
!! | GGTTGTTGCAGTTGATGAAG+AGG | + | chr8.2:32298854-32298873 | None:intergenic | 45.0% |
!! | TTGCAGTTGATGAAGAGGGA+AGG | + | chr8.2:32298849-32298868 | None:intergenic | 45.0% |
!!! | GCTCAAACATTTTGGGATCC+GGG | + | chr8.2:32298743-32298762 | None:intergenic | 45.0% |
AAAGTTGCCAACGATGCCCA+TGG | + | chr8.2:32299694-32299713 | None:intergenic | 50.0% | |
AAGCTCTTGGAGCTGAAGGA+AGG | + | chr8.2:32299612-32299631 | None:intergenic | 50.0% | |
ACACCGACACAGACACTCTT+CGG | + | chr8.2:32299115-32299134 | None:intergenic | 50.0% | |
AGGTCTTCGACTTTGACGAC+TGG | - | chr8.2:32298607-32298626 | MS.gene93027:CDS | 50.0% | |
AGTCGTCAAAGTCGAAGACC+TGG | + | chr8.2:32298608-32298627 | None:intergenic | 50.0% | |
CCGGGTAATCACAGTTGAGA+CGG | + | chr8.2:32298725-32298744 | None:intergenic | 50.0% | |
CCGTCTCAACTGTGATTACC+CGG | - | chr8.2:32298722-32298741 | MS.gene93027:intron | 50.0% | |
CGGTGAGAGAGAGTTCTTGA+AGG | + | chr8.2:32298794-32298813 | None:intergenic | 50.0% | |
GGTCTTCGACTTTGACGACT+GGG | - | chr8.2:32298608-32298627 | MS.gene93027:CDS | 50.0% | |
TCCAGCTCCCAAGTTCTCAA+CGG | + | chr8.2:32300239-32300258 | None:intergenic | 50.0% | |
TCCCAAGTTCTCAACGGTGA+TGG | + | chr8.2:32300233-32300252 | None:intergenic | 50.0% | |
TCGCATGACACAGAACCCTT+TGG | + | chr8.2:32300461-32300480 | None:intergenic | 50.0% | |
TGGCGGAGTCAAGCTTGAAA+CGG | - | chr8.2:32298442-32298461 | MS.gene93027:CDS | 50.0% | |
! | AGAGTGTCCGTGCTTCATAG+AGG | - | chr8.2:32299181-32299200 | MS.gene93027:CDS | 50.0% |
! | ATTGTGACGGAGGTTCGAGT+TGG | + | chr8.2:32298540-32298559 | None:intergenic | 50.0% |
! | CGGTGTCCATTGTTGCTTGT+AGG | - | chr8.2:32300202-32300221 | MS.gene93027:CDS | 50.0% |
! | TTGTGACGGAGGTTCGAGTT+GGG | + | chr8.2:32298539-32298558 | None:intergenic | 50.0% |
!! | AAGAGTGTCTGTGTCGGTGT+CGG | - | chr8.2:32299115-32299134 | MS.gene93027:CDS | 50.0% |
!! | CAGTTGATGAAGAGGGAAGG+AGG | + | chr8.2:32298846-32298865 | None:intergenic | 50.0% |
ACCGTTGAGAACTTGGGAGC+TGG | - | chr8.2:32300235-32300254 | MS.gene93027:CDS | 55.0% | |
ACGGCGGAAAGCAGAAGAAG+AGG | - | chr8.2:32298461-32298480 | MS.gene93027:CDS | 55.0% | |
CGGAGTCAAGCTTGAAACGG+CGG | - | chr8.2:32298445-32298464 | MS.gene93027:CDS | 55.0% | |
CTCTTGGAGCTGAAGGAAGG+TGG | + | chr8.2:32299609-32299628 | None:intergenic | 55.0% | |
CTGCCCAGTGCTAGAAACTC+TGG | - | chr8.2:32299536-32299555 | MS.gene93027:intron | 55.0% | |
GCAACAACCTCGTTTCCCTC+CGG | - | chr8.2:32298865-32298884 | MS.gene93027:CDS | 55.0% | |
TGACTCTCGTCTCTCACAGG+TGG | - | chr8.2:32298562-32298581 | MS.gene93027:CDS | 55.0% | |
TTCTTGAAGGTGGGGACCAG+TGG | + | chr8.2:32298781-32298800 | None:intergenic | 55.0% | |
! | GTTAGTACCGGAGGGAAACG+AGG | + | chr8.2:32298875-32298894 | None:intergenic | 55.0% |
! | TCCTGGTGTCGGACATGTGT+CGG | + | chr8.2:32299147-32299166 | None:intergenic | 55.0% |
!! | CAGAGTTTCTAGCACTGGGC+AGG | + | chr8.2:32299538-32299557 | None:intergenic | 55.0% |
ACCGACACATGTCCGACACC+AGG | - | chr8.2:32299143-32299162 | MS.gene93027:CDS | 60.0% | |
AGACCTGGAGATGCTCCCAG+AGG | + | chr8.2:32298593-32298612 | None:intergenic | 60.0% | |
CCAACGATGCCCATGGCATG+GGG | + | chr8.2:32299687-32299706 | None:intergenic | 60.0% | |
GCCAACGATGCCCATGGCAT+GGG | + | chr8.2:32299688-32299707 | None:intergenic | 60.0% | |
TCACAGGTGGCGACACCTCT+GGG | - | chr8.2:32298575-32298594 | MS.gene93027:CDS | 60.0% | |
TGCCAACGATGCCCATGGCA+TGG | + | chr8.2:32299689-32299708 | None:intergenic | 60.0% | |
! | TGGTGTCGGACATGTGTCGG+TGG | + | chr8.2:32299144-32299163 | None:intergenic | 60.0% |
!! | ACACCTCTGGGAGCATCTCC+AGG | - | chr8.2:32298587-32298606 | MS.gene93027:CDS | 60.0% |
!! | GGAGGTTCGAGTTGGGAGGA+AGG | + | chr8.2:32298532-32298551 | None:intergenic | 60.0% |
!! | TGACGGAGGTTCGAGTTGGG+AGG | + | chr8.2:32298536-32298555 | None:intergenic | 60.0% |
CTCACAGGTGGCGACACCTC+TGG | - | chr8.2:32298574-32298593 | MS.gene93027:CDS | 65.0% | |
CTGTGGTTCCGTGCTGCCAC+TGG | - | chr8.2:32298762-32298781 | MS.gene93027:intron | 65.0% | |
! | CCCCATGCCATGGGCATCGT+TGG | - | chr8.2:32299684-32299703 | MS.gene93027:intron | 65.0% |
GGTGGGGACCAGTGGCAGCA+CGG | + | chr8.2:32298773-32298792 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 32298441 | 32300514 | 32298441 | ID=MS.gene93027 |
chr8.2 | mRNA | 32298441 | 32300514 | 32298441 | ID=MS.gene93027.t1;Parent=MS.gene93027 |
chr8.2 | exon | 32300069 | 32300514 | 32300069 | ID=MS.gene93027.t1.exon1;Parent=MS.gene93027.t1 |
chr8.2 | CDS | 32300069 | 32300514 | 32300069 | ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1 |
chr8.2 | exon | 32299107 | 32299536 | 32299107 | ID=MS.gene93027.t1.exon2;Parent=MS.gene93027.t1 |
chr8.2 | CDS | 32299107 | 32299536 | 32299107 | ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1 |
chr8.2 | exon | 32298859 | 32299008 | 32298859 | ID=MS.gene93027.t1.exon3;Parent=MS.gene93027.t1 |
chr8.2 | CDS | 32298859 | 32299008 | 32298859 | ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1 |
chr8.2 | exon | 32298441 | 32298731 | 32298441 | ID=MS.gene93027.t1.exon4;Parent=MS.gene93027.t1 |
chr8.2 | CDS | 32298441 | 32298731 | 32298441 | ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1 |
Gene Sequence |
Protein sequence |