AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93027


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93027.t1 MTR_8g070950 91.818 440 34 1 1 438 1 440 0.0 802
MS.gene93027.t1 MTR_8g062010 61.969 447 136 11 9 436 3 434 7.38e-175 496
MS.gene93027.t1 MTR_8g062080 57.516 459 162 9 1 436 1 449 4.09e-170 485
MS.gene93027.t1 MTR_8g062310 59.624 426 152 8 15 437 25 433 1.87e-164 470
MS.gene93027.t1 MTR_8g058965 56.632 475 152 13 1 436 1 460 1.29e-160 461
MS.gene93027.t1 MTR_8g469020 55.022 458 163 8 15 437 7 456 4.38e-157 452
MS.gene93027.t1 MTR_8g062300 53.469 490 165 13 1 436 1 481 2.88e-153 443
MS.gene93027.t1 MTR_8g467790 57.447 376 116 7 15 376 148 493 3.12e-132 390
MS.gene93027.t1 MTR_4g050250 51.522 427 151 13 1 378 1 420 6.50e-123 364
MS.gene93027.t1 MTR_2g083840 43.644 472 211 20 1 432 1 457 7.64e-95 293
MS.gene93027.t1 MTR_8g468810 40.842 475 226 17 1 432 1 463 1.17e-92 288
MS.gene93027.t1 MTR_8g058970 40.787 483 226 15 3 432 2 477 2.25e-89 280
MS.gene93027.t1 MTR_8g062270 40.312 449 225 13 15 431 16 453 5.45e-85 268
MS.gene93027.t1 MTR_8g014260 42.549 463 223 21 1 432 1 451 3.18e-84 265
MS.gene93027.t1 MTR_4g032730 37.107 477 243 13 1 431 1 466 3.24e-81 258
MS.gene93027.t1 MTR_8g467800 39.700 466 234 15 7 437 5 458 7.12e-76 244
MS.gene93027.t1 MTR_8g468760 39.294 453 202 14 12 431 6 418 2.05e-74 239
MS.gene93027.t1 MTR_5g092960 37.983 466 245 14 1 431 5 461 3.23e-74 240
MS.gene93027.t1 MTR_2g086020 81.250 144 27 0 294 437 177 320 4.39e-73 232
MS.gene93027.t1 MTR_2g086020 47.682 151 58 5 41 179 1 142 2.84e-31 122
MS.gene93027.t1 MTR_8g468840 38.616 448 232 15 14 430 13 448 1.11e-71 233
MS.gene93027.t1 MTR_8g468810 40.731 383 174 16 1 342 1 371 3.18e-67 219
MS.gene93027.t1 MTR_8g445780 40.488 410 199 21 1 385 1 390 2.36e-64 212
MS.gene93027.t1 MTR_8g468810 42.345 307 130 14 1 271 1 296 8.59e-57 190
MS.gene93027.t1 MTR_8g468810 42.345 307 130 14 1 271 1 296 1.41e-56 190
MS.gene93027.t1 MTR_8g468810 42.345 307 130 14 1 271 1 296 2.77e-56 190
MS.gene93027.t1 MTR_8g014160 34.753 446 206 20 13 432 39 425 8.65e-55 188
MS.gene93027.t1 MTR_5g092960 37.534 373 196 11 1 342 5 371 3.53e-49 172
MS.gene93027.t1 MTR_4g024710 38.176 296 156 13 154 432 62 347 4.27e-40 147
MS.gene93027.t1 MTR_8g467800 39.249 293 147 11 7 273 5 292 6.32e-39 144
MS.gene93027.t1 MTR_1g041245 31.042 451 215 18 9 432 5 386 4.66e-38 142
MS.gene93027.t1 MTR_8g014210 39.831 236 128 7 206 432 1 231 1.50e-36 134
MS.gene93027.t1 MTR_7g056433 28.868 433 244 15 12 432 9 389 3.36e-33 129
MS.gene93027.t1 MTR_5g021550 49.689 161 62 8 5 148 4 162 1.66e-31 118
MS.gene93027.t1 MTR_3g099800 67.816 87 27 1 344 429 19 105 4.31e-31 115
MS.gene93027.t1 MTR_8g077460 47.368 133 67 3 300 432 246 375 9.17e-31 122
MS.gene93027.t1 MTR_8g077460 38.528 231 116 11 1 215 1 221 2.96e-27 112
MS.gene93027.t1 MTR_5g080710 29.478 441 266 18 9 424 26 446 3.22e-30 122
MS.gene93027.t1 MTR_4g024745 36.462 277 151 12 155 415 17 284 6.24e-29 115
MS.gene93027.t1 MTR_7g115270 27.679 448 251 19 5 429 2 399 1.41e-27 113
MS.gene93027.t1 MTR_7g098510 28.571 448 247 18 1 432 1 391 2.68e-27 112
MS.gene93027.t1 MTR_6g022500 28.345 441 228 20 15 432 101 476 1.06e-26 112
MS.gene93027.t1 MTR_5g008920 27.517 447 241 17 8 435 2 384 1.95e-26 110
MS.gene93027.t1 MTR_5g008950 26.376 436 230 19 17 432 1 365 1.86e-25 107
MS.gene93027.t1 MTR_3g108150 25.986 431 250 14 14 431 12 386 4.68e-25 106
MS.gene93027.t1 MTR_5g084070 28.082 438 277 17 6 424 1 419 6.47e-25 106
MS.gene93027.t1 MTR_1089s0010 26.316 437 246 18 11 432 4 379 2.45e-24 104
MS.gene93027.t1 MTR_2g007450 28.188 447 244 17 15 429 16 417 2.58e-24 104
MS.gene93027.t1 MTR_1g085120 27.816 435 244 18 14 432 91 471 4.15e-24 104
MS.gene93027.t1 MTR_1g108820 30.260 423 240 19 15 429 8 383 4.72e-24 103
MS.gene93027.t1 MTR_1g085120 27.816 435 244 18 14 432 166 546 4.81e-24 105
MS.gene93027.t1 MTR_7g033915 27.626 438 224 19 9 431 5 364 6.36e-24 102
MS.gene93027.t1 MTR_7g098480 26.398 447 254 11 1 431 1 388 4.14e-23 101
MS.gene93027.t1 MTR_6g011460 29.280 403 214 15 15 404 46 390 4.25e-23 101
MS.gene93027.t1 MTR_7g026500 28.000 450 246 22 3 431 2 394 1.53e-22 99.4
MS.gene93027.t1 MTR_4g024720 42.222 180 70 9 1 149 1 177 4.84e-22 94.0
MS.gene93027.t1 MTR_3g109982 28.755 466 249 23 8 411 10 454 5.70e-22 99.4
MS.gene93027.t1 MTR_7g098570 26.949 449 244 16 1 427 2 388 7.20e-22 98.2
MS.gene93027.t1 MTR_8g014290 40.909 154 71 7 13 148 8 159 8.28e-22 92.0
MS.gene93027.t1 MTR_7g007080 28.035 453 224 20 13 435 2 382 1.06e-21 96.7
MS.gene93027.t1 MTR_5g058100 28.018 439 238 17 11 431 5 383 1.22e-21 96.7
MS.gene93027.t1 MTR_2g008310 27.602 442 224 19 15 432 2 371 2.23e-21 95.9
MS.gene93027.t1 MTR_7g034115 30.488 410 191 19 15 399 11 351 2.26e-21 95.5
MS.gene93027.t1 MTR_3g082890 27.948 458 250 20 1 432 81 484 5.68e-21 95.5
MS.gene93027.t1 MTR_7g056447 35.714 196 104 9 9 194 3 186 7.54e-21 92.8
MS.gene93027.t1 MTR_6g022360 27.970 404 205 18 15 401 43 377 1.07e-20 94.0
MS.gene93027.t1 MTR_2g008320 28.378 444 224 20 15 432 52 427 2.44e-20 93.2
MS.gene93027.t1 MTR_6g040270 27.378 431 233 17 17 429 10 378 3.98e-20 92.0
MS.gene93027.t1 MTR_8g085430 34.848 198 104 8 15 196 11 199 7.49e-20 90.5
MS.gene93027.t1 MTR_7g056287 26.157 432 243 15 14 431 2 371 1.03e-19 90.5
MS.gene93027.t1 MTR_3g467400 26.667 435 232 20 15 432 3 367 1.21e-19 90.5
MS.gene93027.t1 MTR_7g032380 35.079 191 106 8 15 196 11 192 1.44e-19 90.1
MS.gene93027.t1 MTR_7g032380 32.847 137 79 4 305 432 224 356 5.45e-11 64.3
MS.gene93027.t1 MTR_7g056277 25.740 439 244 15 10 431 254 627 1.77e-19 91.3
MS.gene93027.t1 MTR_5g058000 28.704 432 228 20 15 431 8 374 3.38e-19 89.4
MS.gene93027.t1 MTR_5g073420 33.508 191 111 8 15 195 11 195 4.85e-19 89.0
MS.gene93027.t1 MTR_3g036250 25.459 436 233 16 12 429 2 363 1.98e-18 86.7
MS.gene93027.t1 MTR_0009s0080 27.317 410 230 16 7 399 9 367 2.56e-18 87.0
MS.gene93027.t1 MTR_7g056420 27.021 433 221 19 9 424 3 357 6.75e-18 87.0
MS.gene93027.t1 MTR_7g056430 27.021 433 221 19 9 424 3 357 8.73e-18 86.7
MS.gene93027.t1 MTR_4g039440 27.483 433 245 21 15 432 34 412 9.56e-18 85.1
MS.gene93027.t1 MTR_3g105060 25.901 444 231 18 9 432 8 373 2.62e-17 83.6
MS.gene93027.t1 MTR_4g024770 62.903 62 20 2 1 60 8 68 4.82e-17 75.9
MS.gene93027.t1 MTR_6g045333 26.304 441 257 18 9 431 55 445 5.03e-17 83.2
MS.gene93027.t1 MTR_3g087260 26.415 477 279 18 5 431 2 456 6.32e-17 83.2
MS.gene93027.t1 MTR_7g088260 27.149 442 230 21 14 432 90 462 1.01e-16 82.4
MS.gene93027.t1 MTR_8g014230 46.429 84 43 2 342 425 17 98 2.35e-16 75.1
MS.gene93027.t1 MTR_2g007400 25.330 454 241 20 15 432 12 403 3.89e-16 80.5
MS.gene93027.t1 MTR_5g061680 34.737 190 108 7 15 195 11 193 4.83e-16 79.3
MS.gene93027.t1 MTR_5g073370 27.518 407 223 18 12 405 2 349 5.15e-16 79.7
MS.gene93027.t1 MTR_1g053025 27.664 441 237 22 15 429 2 386 5.20e-16 79.7
MS.gene93027.t1 MTR_4g093690 33.088 272 143 16 12 267 15 263 1.96e-15 76.6
MS.gene93027.t1 MTR_3g107160 25.917 436 249 15 12 432 7 383 3.55e-15 77.4
MS.gene93027.t1 MTR_5g083890 26.316 437 234 20 14 414 5 389 4.14e-15 77.8
MS.gene93027.t1 MTR_7g075820 23.884 448 254 19 11 429 2 391 4.30e-15 77.0
MS.gene93027.t1 MTR_3g107120 25.537 419 225 17 10 399 4 364 1.11e-14 75.9
MS.gene93027.t1 MTR_7g033990 29.902 204 116 7 9 197 5 196 1.49e-14 75.5
MS.gene93027.t1 MTR_4g056030 35.533 197 109 9 12 197 6 195 1.99e-14 75.5
MS.gene93027.t1 MTR_7g060470 25.359 418 234 17 14 406 2 366 2.04e-14 75.1
MS.gene93027.t1 MTR_3g107100 28.866 194 121 8 12 196 8 193 2.57e-14 74.7
MS.gene93027.t1 MTR_3g023470 36.879 141 77 7 12 149 12 143 4.13e-14 73.9
MS.gene93027.t1 MTR_3g082890 32.727 220 126 10 1 207 1 211 4.41e-14 74.3
MS.gene93027.t1 MTR_7g033945 34.286 175 98 9 9 174 5 171 7.48e-14 70.1
MS.gene93027.t1 MTR_2g007500 33.333 195 107 8 9 196 8 186 9.73e-14 72.4
MS.gene93027.t1 MTR_3g095600 31.441 229 120 8 15 231 4 207 1.00e-13 72.0
MS.gene93027.t1 MTR_7g034110 32.487 197 114 8 15 199 11 200 1.72e-13 71.6
MS.gene93027.t1 MTR_1g090900 36.416 173 104 5 12 183 8 175 1.91e-13 69.3
MS.gene93027.t1 MTR_8g014180 59.322 59 21 2 1 57 1 58 2.17e-13 65.1
MS.gene93027.t1 MTR_7g114710 29.317 249 142 10 15 242 13 248 3.00e-13 71.2
MS.gene93027.t1 MTR_1g085120 32.632 190 109 9 14 193 178 358 3.39e-13 71.6
MS.gene93027.t1 MTR_5g045510 32.086 187 114 8 15 195 12 191 3.46e-13 71.2
MS.gene93027.t1 MTR_3g040700 23.618 398 229 13 5 391 33 366 4.50e-13 71.2
MS.gene93027.t1 MTR_5g087940 35.057 174 100 7 2 174 13 174 5.47e-13 70.5
MS.gene93027.t1 MTR_2g020170 35.897 117 68 4 13 125 20 133 6.58e-13 66.2
MS.gene93027.t1 MTR_1g108820 33.505 194 115 8 15 203 8 192 7.16e-13 70.1
MS.gene93027.t1 MTR_3g023630 31.016 187 117 8 15 195 8 188 1.24e-12 69.3
MS.gene93027.t1 MTR_3g110010 31.606 193 116 8 12 198 10 192 1.78e-12 69.7
MS.gene93027.t1 MTR_2g072720 25.641 429 260 15 8 397 32 440 3.68e-12 68.6
MS.gene93027.t1 MTR_4g080590 26.107 429 271 14 11 410 19 430 4.03e-12 68.2
MS.gene93027.t1 MTR_1g066830 31.579 190 112 9 15 195 8 188 1.10e-11 66.6
MS.gene93027.t1 MTR_3g095640 33.553 152 88 6 15 156 18 166 1.13e-11 63.5
MS.gene93027.t1 MTR_7g032370 32.117 137 85 3 303 432 217 352 1.33e-11 66.2
MS.gene93027.t1 MTR_7g032370 31.461 178 105 8 27 196 2 170 8.70e-11 63.5
MS.gene93027.t1 MTR_1g095750 44.048 84 42 3 3 86 34 112 1.68e-11 62.4
MS.gene93027.t1 MTR_2g007360 25.676 444 217 18 15 429 12 371 2.04e-11 65.9
MS.gene93027.t1 MTR_3g114200 34.752 141 84 5 13 150 17 152 2.65e-11 62.0
MS.gene93027.t1 MTR_6g088705 31.527 203 103 10 1 185 1 185 2.87e-11 63.5
MS.gene93027.t1 MTR_3g018680 32.973 185 98 10 2 174 9 179 3.00e-11 65.5
MS.gene93027.t1 MTR_8g066650 34.857 175 92 9 7 172 67 228 3.88e-11 65.1
MS.gene93027.t1 MTR_3g108560 31.959 194 110 11 12 198 17 195 3.91e-11 64.3
MS.gene93027.t1 MTR_1g038710 33.981 206 110 10 13 203 17 211 5.65e-11 64.7
MS.gene93027.t1 MTR_3g108560 31.959 194 110 11 12 198 17 195 5.77e-11 64.3
MS.gene93027.t1 MTR_4g092430 37.419 155 77 9 7 150 29 174 6.35e-11 64.7
MS.gene93027.t1 MTR_4g092430 37.419 155 77 9 7 150 29 174 6.66e-11 64.3
MS.gene93027.t1 MTR_8g006910 32.967 182 102 9 2 174 39 209 7.58e-11 64.3
MS.gene93027.t1 MTR_7g081290 33.333 123 77 3 1 119 1 122 8.50e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93027.t1 AT5G56560 28.571 441 271 17 12 432 2 418 2.08e-25 107
MS.gene93027.t1 AT5G56420 26.984 441 277 15 14 432 5 422 3.22e-25 107
MS.gene93027.t1 AT5G56420 26.984 441 277 15 14 432 5 422 3.22e-25 107
MS.gene93027.t1 AT5G56420 26.984 441 277 15 14 432 5 422 3.22e-25 107
MS.gene93027.t1 AT1G78750 24.790 476 285 18 2 429 5 455 9.40e-25 106
MS.gene93027.t1 AT1G78750 24.790 476 285 18 2 429 5 455 9.40e-25 106
MS.gene93027.t1 AT5G53840 27.373 453 268 19 10 429 13 437 5.26e-24 104
MS.gene93027.t1 AT1G78760 25.855 468 276 22 7 433 8 445 4.41e-21 95.5
MS.gene93027.t1 AT1G69630 26.166 493 248 23 3 429 6 448 6.78e-21 95.1
MS.gene93027.t1 AT1G16930 25.367 477 283 21 1 432 1 449 1.96e-20 93.6
MS.gene93027.t1 AT1G16930 25.367 477 283 21 1 432 1 449 1.96e-20 93.6
MS.gene93027.t1 AT1G16930 25.367 477 283 21 1 432 1 449 1.96e-20 93.6
MS.gene93027.t1 AT4G26340 27.130 446 269 19 15 432 2 419 2.62e-20 93.2
MS.gene93027.t1 AT3G50710 27.273 451 270 22 15 432 2 427 5.85e-20 92.0
MS.gene93027.t1 AT2G26030 27.790 457 271 21 15 429 4 443 6.71e-20 92.0
MS.gene93027.t1 AT4G10400 27.419 434 271 17 15 431 2 408 7.51e-20 91.7
MS.gene93027.t1 AT4G10400 27.419 434 271 17 15 431 2 408 7.51e-20 91.7
MS.gene93027.t1 AT4G10400 27.419 434 271 17 15 431 2 408 7.51e-20 91.7
MS.gene93027.t1 AT2G26030 28.105 459 262 22 15 429 4 438 1.02e-19 91.3
MS.gene93027.t1 AT2G26030 28.105 459 262 22 15 429 4 438 1.02e-19 91.3
MS.gene93027.t1 AT4G13985 26.078 464 276 18 11 429 15 456 4.47e-19 89.7
MS.gene93027.t1 AT5G50270 28.469 418 241 18 15 399 2 394 4.52e-19 89.4
MS.gene93027.t1 AT3G59200 32.821 195 113 7 15 197 7 195 1.33e-18 87.4
MS.gene93027.t1 AT3G58920 27.651 481 271 20 15 432 2 468 1.52e-18 88.2
MS.gene93027.t1 AT3G59200 32.821 195 113 7 15 197 7 195 4.40e-18 87.0
MS.gene93027.t1 AT4G00160 29.854 412 243 18 5 391 6 396 5.95e-18 86.3
MS.gene93027.t1 AT5G44950 25.893 448 279 17 15 427 4 433 3.05e-17 84.0
MS.gene93027.t1 AT5G56400 26.256 438 288 15 15 432 33 455 3.99e-17 83.6
MS.gene93027.t1 AT1G32375 29.204 452 255 26 15 432 2 422 4.72e-17 83.2
MS.gene93027.t1 AT1G32375 29.204 452 255 26 15 432 2 422 4.72e-17 83.2
MS.gene93027.t1 AT1G51370 25.942 451 265 21 11 427 15 430 8.80e-17 82.4
MS.gene93027.t1 AT5G22700 24.819 415 270 15 4 409 32 413 1.40e-16 82.0
MS.gene93027.t1 AT5G56820 26.638 458 272 20 1 429 1 423 2.11e-16 81.3
MS.gene93027.t1 AT5G22660 25.840 476 273 22 1 429 1 443 2.19e-16 81.3
MS.gene93027.t1 AT3G49150 30.000 220 136 9 13 223 14 224 2.80e-16 81.3
MS.gene93027.t1 AT5G60610 26.225 408 249 18 15 396 2 383 3.18e-16 80.5
MS.gene93027.t1 AT5G60610 26.225 408 249 18 15 396 2 383 3.18e-16 80.5
MS.gene93027.t1 AT5G22610 24.123 456 298 17 1 430 1 434 3.20e-16 80.9
MS.gene93027.t1 AT5G38570 25.701 428 253 16 15 431 2 375 3.66e-16 80.1
MS.gene93027.t1 AT5G56690 30.208 192 119 7 17 198 4 190 5.10e-16 80.1
MS.gene93027.t1 AT4G09920 28.315 279 164 12 15 269 2 268 1.32e-15 77.4
MS.gene93027.t1 AT4G09920 28.315 279 164 12 15 269 2 268 1.32e-15 77.4
MS.gene93027.t1 AT4G09920 28.315 279 164 12 15 269 2 268 1.32e-15 77.4
MS.gene93027.t1 AT5G22610 23.237 482 300 17 1 430 1 464 1.52e-15 79.0
MS.gene93027.t1 AT3G42770 27.609 460 238 21 17 424 1 417 1.84e-15 79.0
MS.gene93027.t1 AT4G09920 27.551 294 173 13 15 280 2 283 2.18e-15 77.0
MS.gene93027.t1 AT4G09920 27.551 294 173 13 15 280 2 283 2.18e-15 77.0
MS.gene93027.t1 AT1G66290 26.981 467 252 26 11 429 25 450 2.59e-15 78.2
MS.gene93027.t1 AT2G29930 25.514 486 274 23 5 431 2 458 2.89e-15 78.2
MS.gene93027.t1 AT2G29930 25.514 486 274 23 5 431 2 458 2.89e-15 78.2
MS.gene93027.t1 AT5G41840 31.169 231 133 13 15 224 14 239 6.66e-15 77.0
MS.gene93027.t1 AT4G14103 28.383 303 163 15 11 282 4 283 9.05e-15 75.9
MS.gene93027.t1 AT4G14103 28.383 303 163 15 11 282 4 283 9.05e-15 75.9
MS.gene93027.t1 AT3G59190 28.214 280 158 12 5 253 2 269 9.98e-15 76.6
MS.gene93027.t1 AT3G59190 29.952 207 122 8 5 195 2 201 1.07e-14 75.9
MS.gene93027.t1 AT3G52680 26.526 475 268 20 5 434 11 449 1.14e-14 76.3
MS.gene93027.t1 AT1G66310 28.118 473 257 27 2 429 5 439 1.55e-14 75.9
MS.gene93027.t1 AT5G22700 31.472 197 121 6 4 195 32 219 1.73e-14 75.9
MS.gene93027.t1 AT1G80470 25.636 472 281 24 1 435 1 439 1.82e-14 75.5
MS.gene93027.t1 AT1G06630 27.128 376 210 16 7 342 4 355 1.93e-14 74.7
MS.gene93027.t1 AT1G06630 27.128 376 210 16 7 342 4 355 1.93e-14 74.7
MS.gene93027.t1 AT5G22700 32.796 186 111 6 15 195 6 182 2.70e-14 75.1
MS.gene93027.t1 AT5G22700 32.796 186 111 6 15 195 6 182 2.70e-14 75.1
MS.gene93027.t1 AT5G22700 32.796 186 111 6 15 195 6 182 2.70e-14 75.1
MS.gene93027.t1 AT5G22700 32.796 186 111 6 15 195 6 182 2.70e-14 75.1
MS.gene93027.t1 AT1G13780 25.346 434 254 18 15 399 10 422 2.99e-14 74.7
MS.gene93027.t1 AT1G55660 32.474 194 115 9 15 198 53 240 4.68e-14 73.6
MS.gene93027.t1 AT1G06630 26.913 379 213 16 7 345 4 358 4.73e-14 73.9
MS.gene93027.t1 AT1G06630 26.913 379 213 16 7 345 4 358 4.73e-14 73.9
MS.gene93027.t1 AT1G06630 26.913 379 213 16 7 345 4 358 4.73e-14 73.9
MS.gene93027.t1 AT1G06630 26.913 379 213 16 7 345 4 358 4.73e-14 73.9
MS.gene93027.t1 AT5G50270 33.482 224 115 11 15 223 2 206 4.73e-14 73.2
MS.gene93027.t1 AT1G06630 26.913 379 213 16 7 345 13 367 5.54e-14 73.9
MS.gene93027.t1 AT1G55660 32.474 194 115 9 15 198 53 240 7.52e-14 73.9
MS.gene93027.t1 AT1G06630 27.078 373 208 16 7 339 4 352 9.55e-14 73.6
MS.gene93027.t1 AT4G14096 28.102 274 147 14 15 257 8 262 1.79e-13 72.4
MS.gene93027.t1 AT4G14096 28.102 274 147 14 15 257 8 262 1.79e-13 72.4
MS.gene93027.t1 AT4G15060 30.570 193 119 8 12 195 23 209 2.96e-13 71.6
MS.gene93027.t1 AT5G18780 24.726 457 287 15 8 429 4 438 4.54e-13 71.2
MS.gene93027.t1 AT5G18780 24.726 457 287 15 8 429 4 438 4.54e-13 71.2
MS.gene93027.t1 AT5G56390 29.060 468 236 28 15 431 2 424 5.34e-13 70.9
MS.gene93027.t1 AT5G35995 29.614 233 141 11 15 239 5 222 6.71e-13 70.9
MS.gene93027.t1 AT5G35995 29.614 233 141 11 15 239 5 222 6.71e-13 70.9
MS.gene93027.t1 AT5G56560 33.505 194 112 7 12 198 2 185 1.01e-12 70.5
MS.gene93027.t1 AT4G13960 31.915 235 132 9 15 235 2 222 1.03e-12 70.1
MS.gene93027.t1 AT4G13960 31.915 235 132 9 15 235 2 222 1.03e-12 70.1
MS.gene93027.t1 AT4G00320 28.261 230 135 11 15 223 13 233 1.93e-12 69.3
MS.gene93027.t1 AT1G06630 26.837 313 177 13 7 286 4 297 2.86e-12 67.8
MS.gene93027.t1 AT3G58980 26.383 470 261 24 15 430 2 440 3.43e-12 68.9
MS.gene93027.t1 AT3G52680 31.658 199 124 5 5 197 11 203 4.19e-12 67.8
MS.gene93027.t1 AT5G41630 30.151 199 116 7 15 195 12 205 5.17e-12 67.8
MS.gene93027.t1 AT3G58860 30.151 199 121 8 11 197 3 195 6.44e-12 67.8
MS.gene93027.t1 AT5G18780 29.386 228 143 7 8 228 4 220 8.84e-12 67.0
MS.gene93027.t1 AT5G18780 29.386 228 143 7 8 228 4 220 8.84e-12 67.0
MS.gene93027.t1 AT3G59210 29.091 275 149 11 14 257 6 265 1.71e-11 66.2
MS.gene93027.t1 AT3G59210 29.091 275 149 11 14 257 6 265 1.71e-11 66.2
MS.gene93027.t1 AT3G59210 29.091 275 149 11 14 257 6 265 1.71e-11 66.2
MS.gene93027.t1 AT3G59210 29.091 275 149 11 14 257 6 265 1.71e-11 66.2
MS.gene93027.t1 AT3G59210 29.091 275 149 11 14 257 6 265 1.71e-11 66.2
MS.gene93027.t1 AT3G59230 29.268 205 126 8 7 195 4 205 3.81e-11 65.5
MS.gene93027.t1 AT5G22660 31.000 200 122 7 1 195 1 189 4.21e-11 64.3
MS.gene93027.t1 AT3G58880 24.829 439 256 18 15 401 3 419 6.00e-11 64.7

Find 104 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCACAGCTCAAACATTT+TGG 0.159569 8.2:+32300185 None:intergenic
TGAGAGTTTGCACCTTAATT+TGG 0.204820 8.2:+32298427 None:intergenic
CGTTGGCAACTTTCATAGTA+TGG 0.291851 8.2:-32299232 MS.gene93027:CDS
CCAGCTCCGTCTCCAAATTA+AGG 0.329783 8.2:-32298439 None:intergenic
CTGCTTCAACTCGAATCTTC+TGG 0.334716 8.2:-32298915 MS.gene93027:CDS
CCAAGTGAAATTGTGATTGA+TGG 0.346823 8.2:+32299296 None:intergenic
CTCACAGGTGGCGACACCTC+TGG 0.355297 8.2:-32300359 MS.gene93027:CDS
GAGAACGTTGAACTTTGATA+TGG 0.358111 8.2:+32299496 None:intergenic
GGAAGAGGTTGTTGAGAATA+GGG 0.378113 8.2:+32299160 None:intergenic
AACCATCACCGTTGAGAACT+TGG 0.381357 8.2:-32298705 MS.gene93027:CDS
TTGGGAGGAAGGAGAGTATA+TGG 0.397738 8.2:+32300415 None:intergenic
AACTCTGGATAATTTAGAAC+AGG 0.400095 8.2:+32298971 None:intergenic
CCTTAATTTGGAGACGGAGC+TGG 0.403747 8.2:+32298439 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.413834 8.2:+32298873 None:intergenic
ATTCACATTGAAGGATATCA+AGG 0.416044 8.2:-32298631 MS.gene93027:CDS
TGGAAGAGGTTGTTGAGAAT+AGG 0.418982 8.2:+32299159 None:intergenic
CTGACTTATATTCACATTGA+AGG 0.419150 8.2:-32298640 MS.gene93027:CDS
CTGTGGTTCCGTGCTGCCAC+TGG 0.421703 8.2:-32300171 MS.gene93027:CDS
GGACCGATTGAGTAGTTTAC+CGG 0.425932 8.2:-32300451 MS.gene93027:CDS
CAGTTGATGAAGAGGGAAGG+AGG 0.429220 8.2:+32300090 None:intergenic
TGAAATAAATTGCGAAACTC+TGG 0.431497 8.2:+32298956 None:intergenic
CGTTCAAAGATAAGTCTTCA+AGG 0.436000 8.2:+32299361 None:intergenic
ATTGATGGATTTCAAGCTCT+TGG 0.437125 8.2:+32299311 None:intergenic
ACACCTCTGGGAGCATCTCC+AGG 0.444775 8.2:-32300346 MS.gene93027:CDS
GGAGAGTATATGGCATAGAA+TGG 0.444991 8.2:+32300425 None:intergenic
ACGGAACTTACGAATGTTGC+GGG 0.449382 8.2:+32300230 None:intergenic
CCATCAATCACAATTTCACT+TGG 0.452529 8.2:-32299296 MS.gene93027:CDS
GCCAACGATGCCCATGGCAT+GGG 0.458840 8.2:+32299248 None:intergenic
TACGAATGTTGCGGGATCTA+CGG 0.459610 8.2:+32300238 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.459725 8.2:+32298916 None:intergenic
CTTAATTTGGAGACGGAGCT+GGG 0.467049 8.2:+32298440 None:intergenic
TCACAGGTGGCGACACCTCT+GGG 0.473183 8.2:-32300358 MS.gene93027:CDS
AGTTGATGAAGAGGGAAGGA+GGG 0.475091 8.2:+32300091 None:intergenic
CCCCATGCCATGGGCATCGT+TGG 0.477463 8.2:-32299249 MS.gene93027:CDS
AGATCCAGAGTTTCTAGCAC+TGG 0.481633 8.2:+32299393 None:intergenic
AGGTCTTCGACTTTGACGAC+TGG 0.482564 8.2:-32300326 MS.gene93027:CDS
TCGCATGACACAGAACCCTT+TGG 0.490917 8.2:+32298475 None:intergenic
CTTCAATGTGAATATAAGTC+AGG 0.492415 8.2:+32298641 None:intergenic
ATGTCAAATGACGCGAAAGT+AGG 0.492783 8.2:+32299112 None:intergenic
TGCCAACGATGCCCATGGCA+TGG 0.494789 8.2:+32299247 None:intergenic
TTTCAAGCTCTTGGAGCTGA+AGG 0.498482 8.2:+32299320 None:intergenic
ACCGTTGAGAACTTGGGAGC+TGG 0.499303 8.2:-32298698 MS.gene93027:CDS
TTGTGACGGAGGTTCGAGTT+GGG 0.515633 8.2:+32300397 None:intergenic
TTCTTGAAGGTGGGGACCAG+TGG 0.516341 8.2:+32300155 None:intergenic
GAGAGAGAGTTCTTGAAGGT+GGG 0.520309 8.2:+32300146 None:intergenic
CGGTGAGAGAGAGTTCTTGA+AGG 0.520852 8.2:+32300142 None:intergenic
CTGCCCAGTGCTAGAAACTC+TGG 0.527934 8.2:-32299397 MS.gene93027:CDS
AGTTTGAGTCTCTTGAGTGA+TGG 0.537670 8.2:+32299462 None:intergenic
CAGAGTTTCTAGCACTGGGC+AGG 0.539705 8.2:+32299398 None:intergenic
TGTTAATACTGCAGTCTGCA+TGG 0.541343 8.2:-32299528 MS.gene93027:intron
GGAGGTTCGAGTTGGGAGGA+AGG 0.547871 8.2:+32300404 None:intergenic
TTCGCGTCATTTGACATCAA+AGG 0.548380 8.2:-32299106 MS.gene93027:intron
CCGTCTCAACTGTGATTACC+CGG 0.548978 8.2:-32300211 MS.gene93027:CDS
TTGCAGTTGATGAAGAGGGA+AGG 0.550454 8.2:+32300087 None:intergenic
TCCCAAGTTCTCAACGGTGA+TGG 0.551903 8.2:+32298703 None:intergenic
AGATTGACTGACATACCAAA+GGG 0.555026 8.2:-32298490 MS.gene93027:CDS
ATTGTGACGGAGGTTCGAGT+TGG 0.555423 8.2:+32300396 None:intergenic
GCAACAACCTCGTTTCCCTC+CGG 0.555731 8.2:-32300068 MS.gene93027:intron
AAGCTCTTGGAGCTGAAGGA+AGG 0.556513 8.2:+32299324 None:intergenic
GATATATATCCCCATGCCAT+GGG 0.557465 8.2:-32299258 MS.gene93027:CDS
TGAGAGAGAGTTCTTGAAGG+TGG 0.559302 8.2:+32300145 None:intergenic
TGATATATATCCCCATGCCA+TGG 0.559722 8.2:-32299259 MS.gene93027:CDS
GGTCTTCGACTTTGACGACT+GGG 0.561876 8.2:-32300325 MS.gene93027:CDS
AGTCCGGTAAACTACTCAAT+CGG 0.563071 8.2:+32300448 None:intergenic
AGAGAGAGTTCTTGAAGGTG+GGG 0.563610 8.2:+32300147 None:intergenic
ACCATCACCGTTGAGAACTT+GGG 0.571797 8.2:-32298704 MS.gene93027:CDS
TCACTCAAGAGACTCAAACT+TGG 0.571944 8.2:-32299459 MS.gene93027:CDS
CTCTTGGAGCTGAAGGAAGG+TGG 0.572877 8.2:+32299327 None:intergenic
AGTCGTCAAAGTCGAAGACC+TGG 0.577295 8.2:+32300328 None:intergenic
GATCCAGAGTTTCTAGCACT+GGG 0.579142 8.2:+32299394 None:intergenic
GGTTGTTGCAGTTGATGAAG+AGG 0.580839 8.2:+32300082 None:intergenic
ATCCCAAAATGTTTGAGCTG+TGG 0.581048 8.2:-32300188 MS.gene93027:CDS
TTATGACTCTCGTCTCTCAC+AGG 0.582125 8.2:-32300374 MS.gene93027:CDS
TGGCGGAGTCAAGCTTGAAA+CGG 0.583338 8.2:-32300491 MS.gene93027:CDS
TTTGCACCTTAATTTGGAGA+CGG 0.584664 8.2:+32298433 None:intergenic
ACGGCGGAAAGCAGAAGAAG+AGG 0.584769 8.2:-32300472 MS.gene93027:CDS
TTGAGTGATGGAAAATGAAG+TGG 0.593301 8.2:+32299474 None:intergenic
CAATGTGAATATAAGTCAGG+TGG 0.596431 8.2:+32298644 None:intergenic
ATATGGCATAGAATGGAGTC+CGG 0.596950 8.2:+32300432 None:intergenic
GTTGTTGCAGTTGATGAAGA+GGG 0.600653 8.2:+32300083 None:intergenic
GACAAATTCACTTTCACGTG+AGG 0.601494 8.2:+32299185 None:intergenic
GACGAGAGTCATAATTGTGA+CGG 0.601855 8.2:+32300383 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.608111 8.2:+32298917 None:intergenic
GAAATCATCGACGTTTAGAA+CGG 0.609140 8.2:+32300122 None:intergenic
GACGGAACTTACGAATGTTG+CGG 0.610282 8.2:+32300229 None:intergenic
TGACGGAGGTTCGAGTTGGG+AGG 0.611461 8.2:+32300400 None:intergenic
AAGATTGACTGACATACCAA+AGG 0.615806 8.2:-32298491 MS.gene93027:CDS
CCGGGTAATCACAGTTGAGA+CGG 0.616919 8.2:+32300211 None:intergenic
TCCAGCTCCCAAGTTCTCAA+CGG 0.617102 8.2:+32298697 None:intergenic
TTTAGAACAGGGGCATGAAG+TGG 0.619100 8.2:+32298983 None:intergenic
AAAGTTGCCAACGATGCCCA+TGG 0.622590 8.2:+32299242 None:intergenic
GGTGGGGACCAGTGGCAGCA+CGG 0.627255 8.2:+32300163 None:intergenic
CCAACGATGCCCATGGCATG+GGG 0.628812 8.2:+32299249 None:intergenic
TCTCATAATTAAGAGCAGCA+AGG 0.629918 8.2:-32298858 MS.gene93027:intron
TGGCAACTTTCATAGTATGG+TGG 0.634902 8.2:-32299229 MS.gene93027:CDS
GTTAGTACCGGAGGGAAACG+AGG 0.636742 8.2:+32300061 None:intergenic
AATGTGAATATAAGTCAGGT+GGG 0.643217 8.2:+32298645 None:intergenic
CTCTGGATAATTTAGAACAG+GGG 0.650015 8.2:+32298973 None:intergenic
CAAACTTGGTGTAGAGACTG+TGG 0.652029 8.2:-32299445 MS.gene93027:CDS
ACTCTGGATAATTTAGAACA+GGG 0.667989 8.2:+32298972 None:intergenic
TGACTCTCGTCTCTCACAGG+TGG 0.668779 8.2:-32300371 MS.gene93027:CDS
CGGAGTCAAGCTTGAAACGG+CGG 0.680628 8.2:-32300488 MS.gene93027:CDS
GAGAGTCATAATTGTGACGG+AGG 0.689058 8.2:+32300386 None:intergenic
AGACCTGGAGATGCTCCCAG+AGG 0.734065 8.2:+32300343 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTTATATATGTAGT+TGG - chr8.2:32299884-32299903 MS.gene93027:intron 10.0%
!!! AGTTTAATTTAATCAATATT+TGG - chr8.2:32300113-32300132 MS.gene93027:CDS 10.0%
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.2:32300391-32300410 MS.gene93027:CDS 15.0%
!! GAAAACAAAATCTAAAAATG+AGG + chr8.2:32299015-32299034 None:intergenic 20.0%
!!! AAGGTGAAGTTTTATTTTTA+TGG - chr8.2:32299846-32299865 MS.gene93027:intron 20.0%
!!! ACAAATATATTTTTGAGTTG+TGG - chr8.2:32300177-32300196 MS.gene93027:CDS 20.0%
!!! CCATTTTTTTTATTCATAGT+CGG - chr8.2:32298910-32298929 MS.gene93027:CDS 20.0%
!!! TTTCATTGTTTTTGTTATCT+TGG + chr8.2:32299797-32299816 None:intergenic 20.0%
! AAAATGGAGAGATTGAAATT+AGG + chr8.2:32298897-32298916 None:intergenic 25.0%
! ATAGGTTTGTGAATGAAAAT+AGG + chr8.2:32299038-32299057 None:intergenic 25.0%
! CCGACTATGAATAAAAAAAA+TGG + chr8.2:32298913-32298932 None:intergenic 25.0%
! TAGGTTTGTGAATGAAAATA+GGG + chr8.2:32299037-32299056 None:intergenic 25.0%
!! CATAGCACTACTTTATTTAT+AGG + chr8.2:32299056-32299075 None:intergenic 25.0%
!! TTAATGGTGGAAATGAAATT+TGG - chr8.2:32299271-32299290 MS.gene93027:CDS 25.0%
!! TTCTTTATTTGTTTCAGTGT+TGG + chr8.2:32299364-32299383 None:intergenic 25.0%
!!! AAATACACTTGTTTTAATGG+TGG - chr8.2:32299258-32299277 MS.gene93027:CDS 25.0%
!!! CATTTGCTGAATATATTTTG+CGG - chr8.2:32300342-32300361 MS.gene93027:CDS 25.0%
!!! TCGAAATACACTTGTTTTAA+TGG - chr8.2:32299255-32299274 MS.gene93027:CDS 25.0%
AATGTGAATATAAGTCAGGT+GGG + chr8.2:32300291-32300310 None:intergenic 30.0%
ATTCACATTGAAGGATATCA+AGG - chr8.2:32300302-32300321 MS.gene93027:CDS 30.0%
CTGACTTATATTCACATTGA+AGG - chr8.2:32300293-32300312 MS.gene93027:CDS 30.0%
CTTCAATGTGAATATAAGTC+AGG + chr8.2:32300295-32300314 None:intergenic 30.0%
GATTGAAATTAGGTTAGTAC+CGG + chr8.2:32298887-32298906 None:intergenic 30.0%
TGAAATAAATTGCGAAACTC+TGG + chr8.2:32299980-32299999 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG + chr8.2:32300063-32300082 None:intergenic 30.0%
! AAACTTTTGTCGTAAAAGTG+AGG + chr8.2:32298636-32298655 None:intergenic 30.0%
! AACTCTGGATAATTTAGAAC+AGG + chr8.2:32299965-32299984 None:intergenic 30.0%
! ACTCTGGATAATTTAGAACA+GGG + chr8.2:32299964-32299983 None:intergenic 30.0%
! TTTTTATTCATAGTCGGACT+AGG - chr8.2:32298916-32298935 MS.gene93027:CDS 30.0%
!! AATGAGGAAAGTACCAAATT+AGG + chr8.2:32298999-32299018 None:intergenic 30.0%
!! ATGAGGAAAGTACCAAATTA+GGG + chr8.2:32298998-32299017 None:intergenic 30.0%
!! TGTTTTTGTTATCTTGGAAG+AGG + chr8.2:32299791-32299810 None:intergenic 30.0%
!!! TATATTTTTGAGTTGTGGCA+CGG - chr8.2:32300182-32300201 MS.gene93027:CDS 30.0%
AAGATTGACTGACATACCAA+AGG - chr8.2:32300442-32300461 MS.gene93027:CDS 35.0%
AGATTGACTGACATACCAAA+GGG - chr8.2:32300443-32300462 MS.gene93027:CDS 35.0%
ATGTACACGATAACAAGTGA+TGG + chr8.2:32299923-32299942 None:intergenic 35.0%
CAATGTGAATATAAGTCAGG+TGG + chr8.2:32300292-32300311 None:intergenic 35.0%
CCAAGTGAAATTGTGATTGA+TGG + chr8.2:32299640-32299659 None:intergenic 35.0%
CCATCAATCACAATTTCACT+TGG - chr8.2:32299637-32299656 MS.gene93027:intron 35.0%
CGTTCAAAGATAAGTCTTCA+AGG + chr8.2:32299575-32299594 None:intergenic 35.0%
CTGCAGTATTAACAAAAGAC+AGG + chr8.2:32299399-32299418 None:intergenic 35.0%
GAAATCATCGACGTTTAGAA+CGG + chr8.2:32298814-32298833 None:intergenic 35.0%
GAGAACGTTGAACTTTGATA+TGG + chr8.2:32299440-32299459 None:intergenic 35.0%
GGGAACAAGAGATGAAATTA+TGG + chr8.2:32299332-32299351 None:intergenic 35.0%
TCTCATAATTAAGAGCAGCA+AGG - chr8.2:32300075-32300094 MS.gene93027:CDS 35.0%
TGTTAGACAAAGCCCTAATT+TGG - chr8.2:32298983-32299002 MS.gene93027:CDS 35.0%
! AACCACAGCTCAAACATTTT+GGG + chr8.2:32298750-32298769 None:intergenic 35.0%
! CTCTGGATAATTTAGAACAG+GGG + chr8.2:32299963-32299982 None:intergenic 35.0%
! GCTGAATATATTTTGCGGAA+CGG - chr8.2:32300347-32300366 MS.gene93027:CDS 35.0%
! TTCAGTGTTGGAAGTAGAAA+GGG + chr8.2:32299352-32299371 None:intergenic 35.0%
! TTGAGTGATGGAAAATGAAG+TGG + chr8.2:32299462-32299481 None:intergenic 35.0%
! TTTCAGTGTTGGAAGTAGAA+AGG + chr8.2:32299353-32299372 None:intergenic 35.0%
!! ATTGATGGATTTCAAGCTCT+TGG + chr8.2:32299625-32299644 None:intergenic 35.0%
AACTCTACCTCTATGAAGCA+CGG + chr8.2:32299191-32299210 None:intergenic 40.0%
ACATGCACAAGCAAGCAAAA+TGG + chr8.2:32298966-32298985 None:intergenic 40.0%
AGTCCGGTAAACTACTCAAT+CGG + chr8.2:32298488-32298507 None:intergenic 40.0%
AGTTTGAGTCTCTTGAGTGA+TGG + chr8.2:32299474-32299493 None:intergenic 40.0%
ATATGGCATAGAATGGAGTC+CGG + chr8.2:32298504-32298523 None:intergenic 40.0%
ATCCCAAAATGTTTGAGCTG+TGG - chr8.2:32298745-32298764 MS.gene93027:intron 40.0%
ATGTCAAATGACGCGAAAGT+AGG + chr8.2:32299824-32299843 None:intergenic 40.0%
CGTTGGCAACTTTCATAGTA+TGG - chr8.2:32299701-32299720 MS.gene93027:intron 40.0%
GACAAATTCACTTTCACGTG+AGG + chr8.2:32299751-32299770 None:intergenic 40.0%
GACGAGAGTCATAATTGTGA+CGG + chr8.2:32298553-32298572 None:intergenic 40.0%
GATATATATCCCCATGCCAT+GGG - chr8.2:32299675-32299694 MS.gene93027:intron 40.0%
GGAAGAGGTTGTTGAGAATA+GGG + chr8.2:32299776-32299795 None:intergenic 40.0%
TCACTCAAGAGACTCAAACT+TGG - chr8.2:32299474-32299493 MS.gene93027:CDS 40.0%
TGATATATATCCCCATGCCA+TGG - chr8.2:32299674-32299693 MS.gene93027:intron 40.0%
TGGAAGAGGTTGTTGAGAAT+AGG + chr8.2:32299777-32299796 None:intergenic 40.0%
TGGCAACTTTCATAGTATGG+TGG - chr8.2:32299704-32299723 MS.gene93027:intron 40.0%
TGTTAATACTGCAGTCTGCA+TGG - chr8.2:32299405-32299424 MS.gene93027:CDS 40.0%
TTCGCGTCATTTGACATCAA+AGG - chr8.2:32299827-32299846 MS.gene93027:intron 40.0%
! GAAATTAGGTTAGTACCGGA+GGG + chr8.2:32298883-32298902 None:intergenic 40.0%
! GAACCACAGCTCAAACATTT+TGG + chr8.2:32298751-32298770 None:intergenic 40.0%
! GGAGAGTATATGGCATAGAA+TGG + chr8.2:32298511-32298530 None:intergenic 40.0%
! TATGAAGCACTTACACGACA+TGG - chr8.2:32299072-32299091 MS.gene93027:intron 40.0%
! TGAAATTAGGTTAGTACCGG+AGG + chr8.2:32298884-32298903 None:intergenic 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr8.2:32300019-32300038 None:intergenic 40.0%
!! GTTGTTGCAGTTGATGAAGA+GGG + chr8.2:32298853-32298872 None:intergenic 40.0%
!!! AGCTCAAACATTTTGGGATC+CGG + chr8.2:32298744-32298763 None:intergenic 40.0%
AACCATCACCGTTGAGAACT+TGG - chr8.2:32300228-32300247 MS.gene93027:CDS 45.0%
ACACAGACACTCTTCGGATT+AGG + chr8.2:32299109-32299128 None:intergenic 45.0%
ACCATCACCGTTGAGAACTT+GGG - chr8.2:32300229-32300248 MS.gene93027:CDS 45.0%
ACGGAACTTACGAATGTTGC+GGG + chr8.2:32298706-32298725 None:intergenic 45.0%
AGAGAGAGTTCTTGAAGGTG+GGG + chr8.2:32298789-32298808 None:intergenic 45.0%
CTGCTTCAACTCGAATCTTC+TGG - chr8.2:32300018-32300037 MS.gene93027:intron 45.0%
GACGGAACTTACGAATGTTG+CGG + chr8.2:32298707-32298726 None:intergenic 45.0%
GAGAGAGAGTTCTTGAAGGT+GGG + chr8.2:32298790-32298809 None:intergenic 45.0%
GAGAGTCATAATTGTGACGG+AGG + chr8.2:32298550-32298569 None:intergenic 45.0%
GATTAAGTGTGTCCTGGTGT+CGG + chr8.2:32299158-32299177 None:intergenic 45.0%
GGACCGATTGAGTAGTTTAC+CGG - chr8.2:32298482-32298501 MS.gene93027:CDS 45.0%
GTTCCTCCTACAAGCAACAA+TGG + chr8.2:32300211-32300230 None:intergenic 45.0%
TACGAATGTTGCGGGATCTA+CGG + chr8.2:32298698-32298717 None:intergenic 45.0%
TATGAAGCACGGACACTCTT+CGG + chr8.2:32299180-32299199 None:intergenic 45.0%
TCTTCGGATTAAGTGTGTCC+TGG + chr8.2:32299164-32299183 None:intergenic 45.0%
TGAGAGAGAGTTCTTGAAGG+TGG + chr8.2:32298791-32298810 None:intergenic 45.0%
TTATGACTCTCGTCTCTCAC+AGG - chr8.2:32298559-32298578 MS.gene93027:CDS 45.0%
TTTCAAGCTCTTGGAGCTGA+AGG + chr8.2:32299616-32299635 None:intergenic 45.0%
! TGTCCATTGTTGCTTGTAGG+AGG - chr8.2:32300205-32300224 MS.gene93027:CDS 45.0%
! TTGGGAGGAAGGAGAGTATA+TGG + chr8.2:32298521-32298540 None:intergenic 45.0%
! TTTAGAACAGGGGCATGAAG+TGG + chr8.2:32299953-32299972 None:intergenic 45.0%
!! AATCCGAAGAGTGTCTGTGT+CGG - chr8.2:32299109-32299128 MS.gene93027:CDS 45.0%
!! AGATCCAGAGTTTCTAGCAC+TGG + chr8.2:32299543-32299562 None:intergenic 45.0%
!! AGTTGATGAAGAGGGAAGGA+GGG + chr8.2:32298845-32298864 None:intergenic 45.0%
!! CAAACTTGGTGTAGAGACTG+TGG - chr8.2:32299488-32299507 MS.gene93027:CDS 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr8.2:32300020-32300039 None:intergenic 45.0%
!! GATCCAGAGTTTCTAGCACT+GGG + chr8.2:32299542-32299561 None:intergenic 45.0%
!! GGTTGTTGCAGTTGATGAAG+AGG + chr8.2:32298854-32298873 None:intergenic 45.0%
!! TTGCAGTTGATGAAGAGGGA+AGG + chr8.2:32298849-32298868 None:intergenic 45.0%
!!! GCTCAAACATTTTGGGATCC+GGG + chr8.2:32298743-32298762 None:intergenic 45.0%
AAAGTTGCCAACGATGCCCA+TGG + chr8.2:32299694-32299713 None:intergenic 50.0%
AAGCTCTTGGAGCTGAAGGA+AGG + chr8.2:32299612-32299631 None:intergenic 50.0%
ACACCGACACAGACACTCTT+CGG + chr8.2:32299115-32299134 None:intergenic 50.0%
AGGTCTTCGACTTTGACGAC+TGG - chr8.2:32298607-32298626 MS.gene93027:CDS 50.0%
AGTCGTCAAAGTCGAAGACC+TGG + chr8.2:32298608-32298627 None:intergenic 50.0%
CCGGGTAATCACAGTTGAGA+CGG + chr8.2:32298725-32298744 None:intergenic 50.0%
CCGTCTCAACTGTGATTACC+CGG - chr8.2:32298722-32298741 MS.gene93027:intron 50.0%
CGGTGAGAGAGAGTTCTTGA+AGG + chr8.2:32298794-32298813 None:intergenic 50.0%
GGTCTTCGACTTTGACGACT+GGG - chr8.2:32298608-32298627 MS.gene93027:CDS 50.0%
TCCAGCTCCCAAGTTCTCAA+CGG + chr8.2:32300239-32300258 None:intergenic 50.0%
TCCCAAGTTCTCAACGGTGA+TGG + chr8.2:32300233-32300252 None:intergenic 50.0%
TCGCATGACACAGAACCCTT+TGG + chr8.2:32300461-32300480 None:intergenic 50.0%
TGGCGGAGTCAAGCTTGAAA+CGG - chr8.2:32298442-32298461 MS.gene93027:CDS 50.0%
! AGAGTGTCCGTGCTTCATAG+AGG - chr8.2:32299181-32299200 MS.gene93027:CDS 50.0%
! ATTGTGACGGAGGTTCGAGT+TGG + chr8.2:32298540-32298559 None:intergenic 50.0%
! CGGTGTCCATTGTTGCTTGT+AGG - chr8.2:32300202-32300221 MS.gene93027:CDS 50.0%
! TTGTGACGGAGGTTCGAGTT+GGG + chr8.2:32298539-32298558 None:intergenic 50.0%
!! AAGAGTGTCTGTGTCGGTGT+CGG - chr8.2:32299115-32299134 MS.gene93027:CDS 50.0%
!! CAGTTGATGAAGAGGGAAGG+AGG + chr8.2:32298846-32298865 None:intergenic 50.0%
ACCGTTGAGAACTTGGGAGC+TGG - chr8.2:32300235-32300254 MS.gene93027:CDS 55.0%
ACGGCGGAAAGCAGAAGAAG+AGG - chr8.2:32298461-32298480 MS.gene93027:CDS 55.0%
CGGAGTCAAGCTTGAAACGG+CGG - chr8.2:32298445-32298464 MS.gene93027:CDS 55.0%
CTCTTGGAGCTGAAGGAAGG+TGG + chr8.2:32299609-32299628 None:intergenic 55.0%
CTGCCCAGTGCTAGAAACTC+TGG - chr8.2:32299536-32299555 MS.gene93027:intron 55.0%
GCAACAACCTCGTTTCCCTC+CGG - chr8.2:32298865-32298884 MS.gene93027:CDS 55.0%
TGACTCTCGTCTCTCACAGG+TGG - chr8.2:32298562-32298581 MS.gene93027:CDS 55.0%
TTCTTGAAGGTGGGGACCAG+TGG + chr8.2:32298781-32298800 None:intergenic 55.0%
! GTTAGTACCGGAGGGAAACG+AGG + chr8.2:32298875-32298894 None:intergenic 55.0%
! TCCTGGTGTCGGACATGTGT+CGG + chr8.2:32299147-32299166 None:intergenic 55.0%
!! CAGAGTTTCTAGCACTGGGC+AGG + chr8.2:32299538-32299557 None:intergenic 55.0%
ACCGACACATGTCCGACACC+AGG - chr8.2:32299143-32299162 MS.gene93027:CDS 60.0%
AGACCTGGAGATGCTCCCAG+AGG + chr8.2:32298593-32298612 None:intergenic 60.0%
CCAACGATGCCCATGGCATG+GGG + chr8.2:32299687-32299706 None:intergenic 60.0%
GCCAACGATGCCCATGGCAT+GGG + chr8.2:32299688-32299707 None:intergenic 60.0%
TCACAGGTGGCGACACCTCT+GGG - chr8.2:32298575-32298594 MS.gene93027:CDS 60.0%
TGCCAACGATGCCCATGGCA+TGG + chr8.2:32299689-32299708 None:intergenic 60.0%
! TGGTGTCGGACATGTGTCGG+TGG + chr8.2:32299144-32299163 None:intergenic 60.0%
!! ACACCTCTGGGAGCATCTCC+AGG - chr8.2:32298587-32298606 MS.gene93027:CDS 60.0%
!! GGAGGTTCGAGTTGGGAGGA+AGG + chr8.2:32298532-32298551 None:intergenic 60.0%
!! TGACGGAGGTTCGAGTTGGG+AGG + chr8.2:32298536-32298555 None:intergenic 60.0%
CTCACAGGTGGCGACACCTC+TGG - chr8.2:32298574-32298593 MS.gene93027:CDS 65.0%
CTGTGGTTCCGTGCTGCCAC+TGG - chr8.2:32298762-32298781 MS.gene93027:intron 65.0%
! CCCCATGCCATGGGCATCGT+TGG - chr8.2:32299684-32299703 MS.gene93027:intron 65.0%
GGTGGGGACCAGTGGCAGCA+CGG + chr8.2:32298773-32298792 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 32298441 32300514 32298441 ID=MS.gene93027
chr8.2 mRNA 32298441 32300514 32298441 ID=MS.gene93027.t1;Parent=MS.gene93027
chr8.2 exon 32300069 32300514 32300069 ID=MS.gene93027.t1.exon1;Parent=MS.gene93027.t1
chr8.2 CDS 32300069 32300514 32300069 ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1
chr8.2 exon 32299107 32299536 32299107 ID=MS.gene93027.t1.exon2;Parent=MS.gene93027.t1
chr8.2 CDS 32299107 32299536 32299107 ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1
chr8.2 exon 32298859 32299008 32298859 ID=MS.gene93027.t1.exon3;Parent=MS.gene93027.t1
chr8.2 CDS 32298859 32299008 32298859 ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1
chr8.2 exon 32298441 32298731 32298441 ID=MS.gene93027.t1.exon4;Parent=MS.gene93027.t1
chr8.2 CDS 32298441 32298731 32298441 ID=cds.MS.gene93027.t1;Parent=MS.gene93027.t1
Gene Sequence

>MS.gene93027

ATGGCGGAGTCAAGCTTGAAACGGCGGAAAGCAGAAGAAGAGGACCGATTGAGTAGTTTACCGGACTCCATTCTATGCCATATACTCTCCTTCCTCCCAACTCGAACCTCCGTCACAATTATGACTCTCGTCTCTCACAGGTGGCGACACCTCTGGGAGCATCTCCAGGTCTTCGACTTTGACGACTGGGATCCTCACTTTTACGACAAAAGTTTCGAAAAGTTTGCATCATTCGTCAGTGCTGTGCTCACTCTCCGTAGATCCCGCAACATTCGTAAGTTCCGTCTCAACTGTGATTACCCGGATCCCAAAATGTTTGAGCTGTGGTTCCGTGCTGCCACTGGTCCCCACCTTCAAGAACTCTCTCTCACCGTTCTAAACGTCGATGATTTCGTTAAACTCCCTCCTTCCCTCTTCATCAACTGCAACAACCTCGTTTCCCTCCGGTACTAACCTAATTTCAATCTCTCCATTTTTTTTATTCATAGTCGGACTAGGACTAAATTCATAGTAACTGCAACACCATTTTGCTTGCTTGTGCATGTTAGACAAAGCCCTAATTTGGTACTTTCCTCATTTTTAGATTTTGTTTTCCCTATTTTCATTCACAAACCTATAAATAAAGTAGTGCTATGAAGCACTTACACGACATGGACATCGACACGCCTAATCCGAAGAGTGTCTGTGTCGGTGTCGGTATCCACCGACACATGTCCGACACCAGGACACACTTAATCCGAAGAGTGTCCGTGCTTCATAGAGGTAGAGTTAGTCTCACTTTTGTTTCAAATTTGTTTTTATTTCTATGAAACTGTCGAAATACACTTGTTTTAATGGTGGAAATGAAATTTGGAATCATTTTACATATTATTATATCGATGCTCACTTCCATAATTTCATCTCTTGTTCCCTTTCTACTTCCAACACTGAAACAAATAAAGAATGTTATATATAACCTGTCTTTTGTTAATACTGCAGTCTGCATGGTGTACAAGTCCATATCAAAGTTCAACGTTCTCCACTTCATTTTCCATCACTCAAGAGACTCAAACTTGGTGTAGAGACTGTGGATTCGATAGTTGCTTTTCTCTCTGCCTGCCCAGTGCTAGAAACTCTGGATCTTGACTTTTTCCTTGAAGACTTATCTTTGAACGAAGTTCACATTCCACCTTCCTTCAGCTCCAAGAGCTTGAAATCCATCAATCACAATTTCACTTGGACTCACTTTAAGTTTGATATATATCCCCATGCCATGGGCATCGTTGGCAACTTTCATAGTATGGTGGAAGCATTTCTCGATGTCTTTTCCTCACGTGAAAGTGAATTTGTCGACCCTATTCTCAACAACCTCTTCCAAGATAACAAAAACAATGAAATAAACCTACTTTCGCGTCATTTGACATCAAAGGTGAAGTTTTATTTTTATGGTTTGTATTTTTTTTATATATATTTATATATGTAGTTGGTACTAATACTGCGCCATCACTTGTTATCGTGTACATGCAGTTGCCACTTCATGCCCCTGTTCTAAATTATCCAGAGTTTCGCAATTTATTTCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGGTCGACGTGCTTGAAAAATGCCATATGCTTCAAGTTCTCATAATTAAGAGCAGCAAGGTTTGTTGACTTCTCAAGTTTAATTTAATCAATATTTGGTATGTCTATATGTGCGTGAATGTATGAATCTATTTGTACATACAAATATATTTTTGAGTTGTGGCACGGTGTCCATTGTTGCTTGTAGGAGGAACCATCACCGTTGAGAACTTGGGAGCTGGAGTCAACAACAGTTTCTGAATGTCTCAAATCCCACCTGACTTATATTCACATTGAAGGATATCAAGGATTTGAAGATGAGCTGACATTTGCTGAATATATTTTGCGGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACAAAACAAACAAGTATTGTTCTCTCAAAAGATTGACTGACATACCAAAGGGTTCTGTGTCATGCGAACTTAAATTTGACCCAGCTCCGTCTCCAAATTAA

Protein sequence

>MS.gene93027.t1

MAESSLKRRKAEEEDRLSSLPDSILCHILSFLPTRTSVTIMTLVSHRWRHLWEHLQVFDFDDWDPHFYDKSFEKFASFVSAVLTLRRSRNIRKFRLNCDYPDPKMFELWFRAATGPHLQELSLTVLNVDDFVKLPPSLFINCNNLVSLRLHGVQVHIKVQRSPLHFPSLKRLKLGVETVDSIVAFLSACPVLETLDLDFFLEDLSLNEVHIPPSFSSKSLKSINHNFTWTHFKFDIYPHAMGIVGNFHSMVEAFLDVFSSRESEFVDPILNNLFQDNKNNEINLLSRHLTSKLPLHAPVLNYPEFRNLFHLKFILPCFNSNLLVDVLEKCHMLQVLIIKSSKEEPSPLRTWELESTTVSECLKSHLTYIHIEGYQGFEDELTFAEYILRNGLVLKTMLIFVDISMDKTNKYCSLKRLTDIPKGSVSCELKFDPAPSPN