AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72962


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72962.t1 MTR_8g468810 88.485 330 36 1 1 330 1 328 0.0 587
MS.gene72962.t1 MTR_8g468810 88.365 318 35 1 1 318 1 316 0.0 565
MS.gene72962.t1 MTR_8g468810 88.644 317 34 1 1 317 1 315 0.0 565
MS.gene72962.t1 MTR_8g468810 88.644 317 34 1 1 317 1 315 0.0 563
MS.gene72962.t1 MTR_8g468810 88.644 317 34 1 1 317 1 315 0.0 563
MS.gene72962.t1 MTR_8g058970 64.286 336 95 4 1 317 1 330 1.93e-142 411
MS.gene72962.t1 MTR_2g083840 55.108 323 130 5 1 317 1 314 5.31e-111 330
MS.gene72962.t1 MTR_4g032730 55.769 312 126 6 11 317 2 306 2.00e-101 306
MS.gene72962.t1 MTR_8g468760 57.679 293 103 9 12 297 2 280 2.98e-98 296
MS.gene72962.t1 MTR_8g468840 55.556 297 127 3 25 317 14 309 8.69e-97 294
MS.gene72962.t1 MTR_8g467800 52.252 333 143 7 5 332 3 324 1.68e-95 287
MS.gene72962.t1 MTR_8g062270 51.429 315 145 4 25 333 16 328 1.66e-94 288
MS.gene72962.t1 MTR_5g092960 51.899 316 132 7 14 317 14 321 7.91e-92 280
MS.gene72962.t1 MTR_5g092960 51.899 316 132 7 14 317 14 321 2.91e-91 280
MS.gene72962.t1 MTR_8g467800 52.096 334 144 7 5 333 3 325 7.77e-89 274
MS.gene72962.t1 MTR_8g445780 44.688 320 152 8 1 317 1 298 2.90e-74 234
MS.gene72962.t1 MTR_4g050250 43.429 350 165 8 2 328 4 343 6.45e-71 226
MS.gene72962.t1 MTR_8g014260 42.442 344 169 11 2 331 3 331 1.62e-70 226
MS.gene72962.t1 MTR_8g058965 44.884 303 143 9 11 297 2 296 2.22e-67 218
MS.gene72962.t1 MTR_8g014160 41.479 311 169 7 16 317 32 338 8.82e-64 208
MS.gene72962.t1 MTR_8g469020 41.987 312 157 8 24 317 6 311 1.52e-63 208
MS.gene72962.t1 MTR_8g070950 42.947 319 119 13 1 300 1 275 7.28e-61 201
MS.gene72962.t1 MTR_8g062080 41.137 299 149 10 5 300 7 281 1.21e-50 174
MS.gene72962.t1 MTR_8g062310 40.134 299 146 10 4 301 6 272 2.52e-50 173
MS.gene72962.t1 MTR_8g467790 43.462 260 117 11 25 263 148 398 1.47e-49 173
MS.gene72962.t1 MTR_8g062010 42.553 282 141 9 25 301 9 274 6.89e-49 169
MS.gene72962.t1 MTR_8g077460 44.144 222 117 5 25 241 10 229 1.82e-47 164
MS.gene72962.t1 MTR_5g021550 52.632 171 67 6 1 166 1 162 4.41e-45 151
MS.gene72962.t1 MTR_8g062300 37.168 339 170 9 2 317 3 321 7.62e-44 157
MS.gene72962.t1 MTR_8g014290 46.053 152 72 6 25 167 10 160 5.19e-34 122
MS.gene72962.t1 MTR_4g024720 41.176 187 77 8 1 166 2 176 7.13e-34 124
MS.gene72962.t1 MTR_1g041245 37.500 200 101 7 24 216 10 192 2.46e-26 108
MS.gene72962.t1 MTR_8g014220 35.814 215 76 7 2 211 3 160 5.03e-26 102
MS.gene72962.t1 MTR_7g032380 38.265 196 103 7 25 216 11 192 1.04e-23 100
MS.gene72962.t1 MTR_4g024710 41.830 153 86 3 167 317 58 209 1.44e-23 99.8
MS.gene72962.t1 MTR_2g086020 41.875 160 74 6 51 203 1 148 7.65e-23 97.4
MS.gene72962.t1 MTR_4g056040 32.143 336 163 15 25 315 9 324 5.01e-22 97.1
MS.gene72962.t1 MTR_4g024745 40.000 155 90 3 165 317 10 163 8.80e-22 93.6
MS.gene72962.t1 MTR_4g113810 33.143 175 100 6 107 271 1 168 4.48e-21 89.0
MS.gene72962.t1 MTR_3g107100 31.500 200 120 6 21 216 7 193 2.43e-20 91.3
MS.gene72962.t1 MTR_8g085430 35.714 210 104 7 21 216 7 199 5.04e-20 89.7
MS.gene72962.t1 MTR_7g056447 34.653 202 104 10 21 214 5 186 2.14e-19 87.0
MS.gene72962.t1 MTR_3g107160 31.188 202 119 6 25 219 10 198 2.54e-19 88.2
MS.gene72962.t1 MTR_5g008920 38.049 205 97 11 22 216 6 190 1.21e-18 86.3
MS.gene72962.t1 MTR_4g056070 30.383 339 175 12 25 315 9 334 2.08e-18 85.9
MS.gene72962.t1 MTR_4g056030 30.556 324 179 14 25 324 9 310 2.41e-18 85.9
MS.gene72962.t1 MTR_4g056020 32.362 309 168 16 25 315 9 294 2.60e-18 85.9
MS.gene72962.t1 MTR_3g040700 29.648 199 122 5 23 216 41 226 1.23e-17 83.6
MS.gene72962.t1 MTR_3g036250 31.980 197 116 5 25 216 5 188 1.36e-17 83.2
MS.gene72962.t1 MTR_6g022500 34.500 200 114 8 21 216 97 283 2.07e-17 83.2
MS.gene72962.t1 MTR_5g073420 33.333 198 112 9 25 215 11 195 8.81e-17 80.9
MS.gene72962.t1 MTR_2g007500 33.333 201 103 6 24 218 13 188 1.29e-16 79.7
MS.gene72962.t1 MTR_3g099830 30.288 208 110 9 18 218 5 184 1.96e-16 79.7
MS.gene72962.t1 MTR_4g055990 28.487 337 181 11 25 315 9 331 4.23e-16 79.3
MS.gene72962.t1 MTR_4g055990 28.487 337 181 11 25 315 9 331 5.75e-16 79.0
MS.gene72962.t1 MTR_3g107120 30.796 289 158 14 23 281 7 283 5.77e-16 78.6
MS.gene72962.t1 MTR_7g026500 32.287 223 124 9 1 216 1 203 6.36e-16 78.6
MS.gene72962.t1 MTR_7g034110 33.761 234 117 13 23 242 9 218 8.44e-16 77.8
MS.gene72962.t1 MTR_7g115270 32.512 203 119 7 25 219 12 204 1.18e-15 77.4
MS.gene72962.t1 MTR_5g008950 31.429 210 117 9 27 231 1 188 1.43e-15 77.0
MS.gene72962.t1 MTR_1g038710 28.660 321 193 14 9 310 2 305 2.05e-15 77.0
MS.gene72962.t1 MTR_3g108150 35.714 196 107 7 23 216 11 189 2.36e-15 76.6
MS.gene72962.t1 MTR_7g033915 33.166 199 100 7 23 217 9 178 2.52e-15 76.3
MS.gene72962.t1 MTR_7g033990 33.010 206 117 8 22 220 8 199 2.87e-15 76.6
MS.gene72962.t1 MTR_4g024770 50.704 71 25 2 2 72 10 70 3.05e-15 70.1
MS.gene72962.t1 MTR_7g033945 34.239 184 92 7 23 195 9 174 3.12e-15 73.2
MS.gene72962.t1 MTR_4g093690 31.022 274 160 12 25 285 18 275 3.90e-15 74.7
MS.gene72962.t1 MTR_5g080710 28.525 305 189 11 23 318 31 315 4.20e-15 76.3
MS.gene72962.t1 MTR_1g108820 34.694 196 106 9 24 215 7 184 6.44e-15 75.5
MS.gene72962.t1 MTR_1g108820 33.846 195 109 8 24 215 7 184 9.85e-15 74.7
MS.gene72962.t1 MTR_3g023630 32.487 197 119 8 22 216 5 189 1.17e-14 74.3
MS.gene72962.t1 MTR_7g034115 34.450 209 109 8 24 223 10 199 1.49e-14 74.3
MS.gene72962.t1 MTR_7g098510 32.020 203 113 8 21 216 14 198 1.90e-14 73.9
MS.gene72962.t1 MTR_2g007400 30.288 208 124 8 25 219 12 211 4.28e-14 73.2
MS.gene72962.t1 MTR_5g058100 33.503 197 117 7 25 219 9 193 6.82e-14 72.4
MS.gene72962.t1 MTR_2g007450 30.222 225 138 8 6 218 2 219 1.03e-13 72.0
MS.gene72962.t1 MTR_3g105060 28.994 169 108 5 25 193 14 170 3.14e-13 70.1
MS.gene72962.t1 MTR_5g061680 32.821 195 117 7 25 216 11 194 7.03e-13 68.9
MS.gene72962.t1 MTR_7g088260 30.806 211 131 4 6 215 72 268 7.58e-13 69.3
MS.gene72962.t1 MTR_7g098480 33.333 198 117 5 21 216 14 198 7.64e-13 69.3
MS.gene72962.t1 MTR_5g058000 34.783 207 112 11 21 221 4 193 7.67e-13 68.9
MS.gene72962.t1 MTR_7g056433 31.156 199 125 6 25 221 12 200 1.03e-12 68.9
MS.gene72962.t1 MTR_5g083890 30.622 209 125 7 25 218 6 209 1.54e-12 68.6
MS.gene72962.t1 MTR_2g100590 24.783 230 157 3 1 217 8 234 1.76e-12 68.2
MS.gene72962.t1 MTR_6g044560 30.769 234 133 10 7 217 161 388 1.97e-12 68.2
MS.gene72962.t1 MTR_2g100590 24.783 230 157 3 1 217 8 234 1.98e-12 68.2
MS.gene72962.t1 MTR_6g044572 31.019 216 121 9 25 217 2 212 2.82e-12 67.4
MS.gene72962.t1 MTR_4g098590 32.836 201 119 8 27 218 1 194 2.98e-12 67.4
MS.gene72962.t1 MTR_2g100590 24.783 230 157 3 1 217 8 234 2.99e-12 67.8
MS.gene72962.t1 MTR_3g082890 29.730 222 129 8 1 218 1 199 3.85e-12 67.4
MS.gene72962.t1 MTR_6g011460 30.455 220 130 7 7 219 28 231 4.30e-12 67.0
MS.gene72962.t1 MTR_3g082890 29.730 222 129 8 1 218 81 279 5.18e-12 67.0
MS.gene72962.t1 MTR_7g098570 30.808 198 124 5 24 220 19 204 5.43e-12 67.0
MS.gene72962.t1 MTR_8g014210 44.681 94 51 1 224 317 1 93 5.62e-12 65.1
MS.gene72962.t1 MTR_2g005990 29.756 205 128 7 24 218 5 203 1.07e-11 65.9
MS.gene72962.t1 MTR_7g114710 32.323 198 112 8 25 216 13 194 1.55e-11 65.1
MS.gene72962.t1 MTR_7g055943 33.005 203 111 11 21 215 36 221 3.08e-11 64.3
MS.gene72962.t1 MTR_4g090940 25.581 344 198 14 2 318 138 450 3.79e-11 64.3
MS.gene72962.t1 MTR_1089s0010 30.093 216 130 10 25 235 8 207 4.91e-11 63.5
MS.gene72962.t1 MTR_7g033940 34.677 124 70 4 27 149 96 209 5.70e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72962.t1 AT1G16930 31.847 314 178 13 23 318 13 308 1.21e-26 109
MS.gene72962.t1 AT1G16930 31.847 314 178 13 23 318 13 308 1.21e-26 109
MS.gene72962.t1 AT1G16930 31.847 314 178 13 23 318 13 308 1.21e-26 109
MS.gene72962.t1 AT4G14096 29.710 276 172 10 16 284 2 262 1.12e-22 98.6
MS.gene72962.t1 AT4G14096 29.710 276 172 10 16 284 2 262 1.12e-22 98.6
MS.gene72962.t1 AT4G14103 31.868 273 157 11 25 284 8 264 4.99e-22 96.7
MS.gene72962.t1 AT4G14103 31.618 272 159 11 25 284 8 264 5.07e-22 95.9
MS.gene72962.t1 AT4G14103 31.618 272 159 11 25 284 8 264 5.07e-22 95.9
MS.gene72962.t1 AT1G80470 27.832 309 194 13 22 318 12 303 6.39e-22 96.3
MS.gene72962.t1 AT1G55660 30.612 245 153 9 25 262 53 287 7.42e-22 95.1
MS.gene72962.t1 AT1G55660 30.612 245 153 9 25 262 53 287 1.78e-21 95.1
MS.gene72962.t1 AT2G04230 31.457 302 176 10 23 311 11 294 1.79e-21 95.1
MS.gene72962.t1 AT4G10400 29.412 289 180 11 25 309 2 270 9.33e-21 92.8
MS.gene72962.t1 AT4G10400 29.412 289 180 11 25 309 2 270 9.33e-21 92.8
MS.gene72962.t1 AT4G10400 29.412 289 180 11 25 309 2 270 9.33e-21 92.8
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 2.41e-20 90.1
MS.gene72962.t1 AT4G26340 29.795 292 176 11 25 309 2 271 3.29e-20 91.3
MS.gene72962.t1 AT5G38590 30.303 264 166 10 25 283 2 252 4.04e-20 89.4
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.17e-20 89.7
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.17e-20 89.7
MS.gene72962.t1 AT1G06630 29.268 287 187 9 16 294 11 289 6.82e-20 90.1
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.86e-20 90.1
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.86e-20 90.1
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.86e-20 90.1
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 6.86e-20 90.1
MS.gene72962.t1 AT5G56370 29.693 293 174 11 25 311 2 268 8.36e-20 89.0
MS.gene72962.t1 AT5G38590 29.323 266 166 9 25 283 2 252 1.04e-19 89.7
MS.gene72962.t1 AT5G56370 29.693 293 174 11 25 311 2 268 1.42e-19 89.4
MS.gene72962.t1 AT5G56370 29.693 293 174 11 25 311 2 268 1.42e-19 89.4
MS.gene72962.t1 AT1G06630 29.603 277 180 8 25 294 12 280 2.09e-19 89.4
MS.gene72962.t1 AT4G00315 31.579 247 148 10 25 262 2 236 2.39e-19 89.0
MS.gene72962.t1 AT4G00160 32.520 246 148 8 25 263 16 250 3.62e-19 88.2
MS.gene72962.t1 AT5G60610 27.632 304 169 12 25 312 2 270 6.13e-19 87.0
MS.gene72962.t1 AT5G60610 27.632 304 169 12 25 312 2 270 6.13e-19 87.0
MS.gene72962.t1 AT1G78750 26.154 325 216 10 11 318 5 322 7.07e-19 87.4
MS.gene72962.t1 AT1G78750 26.154 325 216 10 11 318 5 322 7.07e-19 87.4
MS.gene72962.t1 AT3G59200 28.470 281 177 12 25 294 7 274 1.15e-18 86.3
MS.gene72962.t1 AT4G09920 28.082 292 184 12 25 309 2 274 2.90e-18 84.3
MS.gene72962.t1 AT4G09920 28.082 292 184 12 25 309 2 274 2.90e-18 84.3
MS.gene72962.t1 AT3G26922 30.719 306 170 14 18 309 7 284 3.01e-18 84.3
MS.gene72962.t1 AT3G26922 30.719 306 170 14 18 309 7 284 3.01e-18 84.3
MS.gene72962.t1 AT4G09920 28.082 292 184 12 25 309 2 274 4.27e-18 83.6
MS.gene72962.t1 AT4G09920 28.082 292 184 12 25 309 2 274 4.27e-18 83.6
MS.gene72962.t1 AT4G09920 28.082 292 184 12 25 309 2 274 4.27e-18 83.6
MS.gene72962.t1 AT4G15060 28.667 300 169 11 9 283 10 289 4.31e-18 85.1
MS.gene72962.t1 AT2G26030 28.228 333 188 14 23 326 2 312 4.35e-18 85.1
MS.gene72962.t1 AT3G59200 28.470 281 177 12 25 294 7 274 4.37e-18 85.5
MS.gene72962.t1 AT2G26030 28.228 333 188 14 23 326 2 312 4.86e-18 85.1
MS.gene72962.t1 AT2G26030 28.228 333 188 14 23 326 2 312 4.86e-18 85.1
MS.gene72962.t1 AT3G58940 27.545 334 186 15 25 316 2 321 4.88e-18 85.5
MS.gene72962.t1 AT3G58940 27.545 334 186 15 25 316 2 321 4.88e-18 85.5
MS.gene72962.t1 AT4G13985 26.706 337 212 10 1 318 1 321 5.34e-18 85.1
MS.gene72962.t1 AT5G56440 28.862 246 158 8 25 264 2 236 8.03e-18 84.3
MS.gene72962.t1 AT5G53840 27.950 322 200 12 17 333 10 304 1.23e-17 84.0
MS.gene72962.t1 AT5G56420 28.667 300 175 12 25 311 6 279 1.86e-17 83.2
MS.gene72962.t1 AT5G56420 28.667 300 175 12 25 311 6 279 1.86e-17 83.2
MS.gene72962.t1 AT5G56420 28.667 300 175 12 25 311 6 279 1.86e-17 83.2
MS.gene72962.t1 AT3G59170 29.236 301 170 11 21 284 3 297 2.30e-17 83.2
MS.gene72962.t1 AT5G22670 33.202 253 140 11 22 262 8 243 2.56e-17 82.8
MS.gene72962.t1 AT4G15060 29.021 286 158 11 23 283 170 435 3.84e-17 82.8
MS.gene72962.t1 AT5G41840 30.732 205 126 8 25 218 14 213 7.83e-17 81.6
MS.gene72962.t1 AT1G13780 26.807 332 202 13 25 328 10 328 1.49e-16 79.7
MS.gene72962.t1 AT5G41630 29.457 258 153 9 25 260 12 262 2.82e-16 79.7
MS.gene72962.t1 AT5G56400 27.707 314 193 11 1 304 16 305 2.95e-16 79.7
MS.gene72962.t1 AT1G78760 27.019 322 199 15 15 318 6 309 3.21e-16 79.7
MS.gene72962.t1 AT3G52680 32.510 243 140 10 25 258 21 248 3.31e-16 79.7
MS.gene72962.t1 AT5G56390 28.125 320 193 10 25 327 2 301 3.40e-16 79.3
MS.gene72962.t1 AT3G52680 32.510 243 140 10 25 258 21 248 3.48e-16 79.0
MS.gene72962.t1 AT5G41830 30.693 202 127 4 25 217 13 210 3.53e-16 79.7
MS.gene72962.t1 AT3G50710 27.027 296 185 11 25 309 2 277 5.55e-16 79.0
MS.gene72962.t1 AT1G13780 25.926 324 202 11 25 322 10 321 6.88e-16 78.6
MS.gene72962.t1 AT2G42720 29.630 324 179 14 25 322 2 302 7.89e-16 78.6
MS.gene72962.t1 AT1G66300 27.628 333 203 14 5 318 11 324 9.24e-16 78.2
MS.gene72962.t1 AT5G56410 25.688 327 184 14 32 323 10 312 1.10e-15 78.2
MS.gene72962.t1 AT3G44810 31.048 248 149 9 21 255 3 241 1.10e-15 78.2
MS.gene72962.t1 AT2G26860 28.094 299 177 13 25 309 2 276 2.47e-15 76.6
MS.gene72962.t1 AT2G26860 28.094 299 177 13 25 309 2 276 2.47e-15 76.6
MS.gene72962.t1 AT4G00320 28.922 204 128 5 25 217 13 210 2.64e-15 77.0
MS.gene72962.t1 AT3G26922 29.703 303 152 12 18 309 7 259 2.95e-15 75.5
MS.gene72962.t1 AT3G59210 33.171 205 117 7 21 217 3 195 3.22e-15 76.6
MS.gene72962.t1 AT3G59210 33.171 205 117 7 21 217 3 195 3.22e-15 76.6
MS.gene72962.t1 AT3G59210 33.171 205 117 7 21 217 3 195 3.22e-15 76.6
MS.gene72962.t1 AT3G59210 33.171 205 117 7 21 217 3 195 3.22e-15 76.6
MS.gene72962.t1 AT3G59210 33.171 205 117 7 21 217 3 195 3.22e-15 76.6
MS.gene72962.t1 AT1G69630 30.000 250 149 11 24 262 17 251 4.55e-15 76.3
MS.gene72962.t1 AT3G58860 29.889 271 171 12 25 287 7 266 6.81e-15 75.5
MS.gene72962.t1 AT4G13965 29.900 301 176 14 17 309 3 276 9.35e-15 75.1
MS.gene72962.t1 AT5G18770 27.052 329 196 12 9 317 14 318 1.25e-14 74.3
MS.gene72962.t1 AT5G53635 28.512 242 155 8 27 262 2 231 1.92e-14 74.3
MS.gene72962.t1 AT3G58930 27.245 323 209 11 25 329 2 316 2.33e-14 73.9
MS.gene72962.t1 AT3G58930 27.245 323 209 11 25 329 2 316 2.33e-14 73.9
MS.gene72962.t1 AT3G58930 27.245 323 209 11 25 329 2 316 2.33e-14 73.9
MS.gene72962.t1 AT3G58900 27.928 333 198 13 25 328 2 321 2.83e-14 73.2
MS.gene72962.t1 AT3G58900 27.928 333 198 13 25 328 2 321 2.83e-14 73.2
MS.gene72962.t1 AT5G18770 27.052 329 196 12 9 317 14 318 2.87e-14 73.9
MS.gene72962.t1 AT5G44950 32.530 249 140 14 25 262 4 235 3.52e-14 73.6
MS.gene72962.t1 AT3G58900 29.225 284 178 11 25 296 2 274 3.65e-14 72.4
MS.gene72962.t1 AT1G05080 26.667 330 212 13 11 327 2 314 3.73e-14 73.2
MS.gene72962.t1 AT5G62970 28.622 283 166 12 25 280 2 275 4.20e-14 73.2
MS.gene72962.t1 AT3G59190 29.670 273 156 13 4 262 2 252 4.25e-14 73.6
MS.gene72962.t1 AT3G59190 30.159 252 151 12 25 262 12 252 6.10e-14 72.4
MS.gene72962.t1 AT3G58900 29.225 284 178 11 25 296 2 274 9.07e-14 72.4
MS.gene72962.t1 AT5G53640 27.442 215 130 8 6 215 3 196 1.14e-13 69.7
MS.gene72962.t1 AT4G22280 27.796 313 176 13 25 318 2 283 1.31e-13 71.2
MS.gene72962.t1 AT5G22700 27.795 331 188 15 25 331 6 309 1.53e-13 71.6
MS.gene72962.t1 AT5G22700 27.795 331 188 15 25 331 6 309 1.53e-13 71.6
MS.gene72962.t1 AT5G22700 27.795 331 188 15 25 331 6 309 1.53e-13 71.6
MS.gene72962.t1 AT5G22700 27.795 331 188 15 25 331 6 309 1.53e-13 71.6
MS.gene72962.t1 AT4G22280 27.796 313 176 13 25 318 2 283 1.79e-13 71.2
MS.gene72962.t1 AT5G38390 31.365 271 151 12 25 285 2 247 1.87e-13 71.2
MS.gene72962.t1 AT5G22700 27.795 331 188 15 25 331 43 346 1.96e-13 71.2
MS.gene72962.t1 AT1G58310 28.912 294 169 13 25 291 8 288 5.72e-13 70.1
MS.gene72962.t1 AT5G22720 29.032 279 154 14 1 260 1 254 8.64e-13 69.3
MS.gene72962.t1 AT5G56810 28.763 299 175 14 22 304 12 288 9.12e-13 68.6
MS.gene72962.t1 AT5G50270 27.458 295 183 12 25 309 2 275 9.50e-13 68.2
MS.gene72962.t1 AT1G66310 26.838 272 162 11 1 260 1 247 1.05e-12 68.9
MS.gene72962.t1 AT5G50270 27.458 295 183 12 25 309 2 275 1.60e-12 68.2
MS.gene72962.t1 AT5G56810 28.763 299 175 14 22 304 12 288 1.66e-12 68.6
MS.gene72962.t1 AT1G60400 26.852 324 195 14 18 318 7 311 1.79e-12 68.2
MS.gene72962.t1 AT4G26350 32.323 198 115 8 25 218 2 184 2.32e-12 67.8
MS.gene72962.t1 AT3G42770 30.256 195 128 4 27 217 1 191 3.19e-12 67.8
MS.gene72962.t1 AT5G18780 30.233 258 149 11 17 262 3 241 3.58e-12 67.0
MS.gene72962.t1 AT5G18780 30.233 258 149 11 17 262 3 241 3.58e-12 67.0
MS.gene72962.t1 AT5G56700 27.668 253 155 10 73 315 7 241 5.38e-12 65.9
MS.gene72962.t1 AT5G22700 28.968 252 148 11 25 262 43 277 5.60e-12 66.6
MS.gene72962.t1 AT5G56700 27.734 256 157 10 73 318 7 244 6.45e-12 66.2
MS.gene72962.t1 AT5G18780 30.233 258 149 11 17 262 3 241 7.98e-12 66.2
MS.gene72962.t1 AT5G18780 30.233 258 149 11 17 262 3 241 7.98e-12 66.2
MS.gene72962.t1 AT5G56380 29.553 291 173 14 25 293 2 282 1.31e-11 65.5
MS.gene72962.t1 AT5G56380 29.553 291 173 14 25 293 2 282 1.31e-11 65.5
MS.gene72962.t1 AT3G49030 29.866 298 171 13 25 309 21 293 1.33e-11 65.5
MS.gene72962.t1 AT2G29930 26.948 308 176 14 25 309 12 293 1.41e-11 65.5
MS.gene72962.t1 AT2G29930 26.948 308 176 14 25 309 12 293 1.41e-11 65.5
MS.gene72962.t1 AT3G49030 29.618 314 189 12 25 325 21 315 1.57e-11 65.5
MS.gene72962.t1 AT3G49150 32.000 200 121 8 21 215 12 201 1.80e-11 65.5
MS.gene72962.t1 AT3G26930 30.645 248 139 10 22 260 18 241 2.59e-11 64.7
MS.gene72962.t1 AT5G38386 25.413 303 166 12 25 318 2 253 3.33e-11 64.3
MS.gene72962.t1 AT5G38386 25.413 303 166 12 25 318 2 253 3.33e-11 64.3
MS.gene72962.t1 AT5G56560 29.688 192 118 7 26 215 6 182 4.11e-11 63.9
MS.gene72962.t1 AT5G22610 28.044 271 160 12 25 274 18 274 5.23e-11 63.9
MS.gene72962.t1 AT1G60410 25.385 260 152 11 22 262 7 243 9.37e-11 62.8

Find 88 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCAATGCAACTTCTAT+TGG 0.243149 8.3:+41744744 MS.gene72962:CDS
CACAAAACTATTACATATAA+TGG 0.265342 8.3:-41744941 None:intergenic
AGTTCCAAAGTTTCTAAGAT+TGG 0.318329 8.3:-41744579 None:intergenic
CGCAAAGTCTTTAAAATGTT+CGG 0.329169 8.3:-41743148 None:intergenic
TCGGCCTCGCCGTCGACATC+GGG 0.348507 8.3:-41743129 None:intergenic
CCATCGTCTTCTTCTTCTCC+TGG 0.351018 8.3:-41742931 None:intergenic
TTGGCAATGCAACTTCTATT+GGG 0.363130 8.3:+41744745 MS.gene72962:CDS
TGTGGAATTGGAACAATCTT+CGG 0.373876 8.3:+41744470 MS.gene72962:CDS
TGCATTGCCAAATGTGATAT+TGG 0.374879 8.3:-41744733 None:intergenic
TGGTGAGATCTTTGTGGAAT+TGG 0.375275 8.3:+41744458 MS.gene72962:CDS
TGTAATGTACACAGTCTCTA+TGG 0.378284 8.3:+41744438 MS.gene72962:intron
CCGAATCTTTGGCCAAGCTT+AGG 0.388638 8.3:+41744613 MS.gene72962:CDS
GGCAGAGAGAAGGATATTAA+TGG 0.390004 8.3:-41744553 None:intergenic
CGAATCTTTGGCCAAGCTTA+GGG 0.393635 8.3:+41744614 MS.gene72962:CDS
TACGAAGGACCCGCGACATT+CGG 0.394870 8.3:+41743196 MS.gene72962:CDS
AGCCTCACCAATATCACATT+TGG 0.403388 8.3:+41744726 MS.gene72962:CDS
TACCTGATGGAGAGGAGGTT+AGG 0.408512 8.3:-41743384 None:intergenic
TTCGGCCTCGCCGTCGACAT+CGG 0.410886 8.3:-41743130 None:intergenic
CGTGGATCCGCACCGCTGTT+GGG 0.414380 8.3:+41743280 MS.gene72962:CDS
ATATGGCATAAGAGAGAGTC+TGG 0.419464 8.3:-41742994 None:intergenic
CGAAGTTATCAAGTTGAGAT+TGG 0.421124 8.3:-41743239 None:intergenic
TGGGGAGGAAGGAAAGTATA+TGG 0.425788 8.3:-41743011 None:intergenic
AGAGGTTTCTGTGGGGAGGA+AGG 0.427670 8.3:-41743022 None:intergenic
AGAGGAGGTTAGGGCATGAT+AGG 0.429110 8.3:-41743374 None:intergenic
ACTCTCCTCCAAGCTCTCTC+TGG 0.432658 8.3:+41744843 MS.gene72962:CDS
CTCATAGGTATCTTCATCTC+TGG 0.437215 8.3:+41743067 MS.gene72962:CDS
GTTTAATGCCAGAGAGAGCT+TGG 0.438724 8.3:-41744851 None:intergenic
CCTAAGCTTGGCCAAAGATT+CGG 0.439078 8.3:-41744613 None:intergenic
ACGTGGATCCGCACCGCTGT+TGG 0.441351 8.3:+41743279 MS.gene72962:CDS
GGCCAAAGATTCGGTTGAAA+AGG 0.442677 8.3:-41744604 None:intergenic
CTGTCCAATCTTAGAAACTT+TGG 0.459587 8.3:+41744575 MS.gene72962:CDS
CTTGGAGGAGAGTGAGTAAA+GGG 0.461485 8.3:-41744833 None:intergenic
AAGACTCATTGTGCATATAG+AGG 0.462136 8.3:-41743040 None:intergenic
GCCCTAACCTCCTCTCCATC+AGG 0.465327 8.3:+41743382 MS.gene72962:CDS
ACCTGATGGAGAGGAGGTTA+GGG 0.466754 8.3:-41743383 None:intergenic
CTCGCTCTCTTCTCGTCTGA+GGG 0.467717 8.3:+41743324 MS.gene72962:CDS
CAATGAGTCTTGTCTCTCAT+AGG 0.474674 8.3:+41743052 MS.gene72962:CDS
TCTCTATGGTGAGATCTTTG+TGG 0.495271 8.3:+41744452 MS.gene72962:CDS
CATCGTAGAAATCAAAAGCT+TGG 0.496050 8.3:-41743098 None:intergenic
TCTCGCTCTCTTCTCGTCTG+AGG 0.498144 8.3:+41743323 MS.gene72962:CDS
CAAAGTTTCTAAGATTGGAC+AGG 0.500334 8.3:-41744574 None:intergenic
ATGTGATATTGGTGAGGCTA+AGG 0.505330 8.3:-41744722 None:intergenic
CTCTAGGTGGGGCCCAACAG+CGG 0.520365 8.3:-41743292 None:intergenic
GCTTGGAGGAGAGTGAGTAA+AGG 0.536107 8.3:-41744834 None:intergenic
ATTAAACGTCTAGTGTTTCG+TGG 0.537844 8.3:+41744867 MS.gene72962:CDS
AGATGTAATCTCTTCAATGA+TGG 0.541081 8.3:-41744504 None:intergenic
ACTGCTTAATCTGTCTGTGT+TGG 0.543571 8.3:-41742968 None:intergenic
GTGCATATAGAGGTTTCTGT+GGG 0.550165 8.3:-41743030 None:intergenic
CGCTGTTGGGCCCCACCTAG+AGG 0.555433 8.3:+41743293 MS.gene72962:CDS
ACGCATCTTCCGAATGTCGC+GGG 0.555891 8.3:-41743205 None:intergenic
AACAGATTCACTTTCAGAAG+CGG 0.572108 8.3:-41744808 None:intergenic
CTCTTCTCGTCTGAGGGTGA+CGG 0.572937 8.3:+41743330 MS.gene72962:CDS
GAAGAAGAAGACGATGGTCA+AGG 0.573718 8.3:+41742937 MS.gene72962:CDS
GAATACTACCCCGATGTCGA+CGG 0.574728 8.3:+41743120 MS.gene72962:CDS
AGTTCAAAGCGAAGAAAACC+AGG 0.578682 8.3:+41742913 MS.gene72962:CDS
AGATTGGACAGGCAGAGAGA+AGG 0.579911 8.3:-41744563 None:intergenic
GGAAGATGGAACCCTAAGCT+TGG 0.579963 8.3:-41744625 None:intergenic
TAATGCCAGAGAGAGCTTGG+AGG 0.588199 8.3:-41744848 None:intergenic
GTTTCGTGGTTATACAGCAA+AGG 0.594947 8.3:+41744881 MS.gene72962:CDS
GAGCGAGATGAAGATCCTCT+AGG 0.596033 8.3:-41743308 None:intergenic
ACATCTAGACACTGGTAATG+TGG 0.599292 8.3:+41744521 MS.gene72962:CDS
CTGAACGCTCTGTTGACACG+TGG 0.601980 8.3:+41743262 MS.gene72962:CDS
TGTGCATATAGAGGTTTCTG+TGG 0.606102 8.3:-41743031 None:intergenic
GAGATGAAGATCCTCTAGGT+GGG 0.606924 8.3:-41743304 None:intergenic
CGGAAGATGCGTCTCTCTTG+CGG 0.610368 8.3:+41743216 MS.gene72962:CDS
TATTGGGAACTTGCACAATG+TGG 0.620226 8.3:+41744761 MS.gene72962:CDS
AGGCTAAGGTACTTGAGACC+AGG 0.622331 8.3:-41744708 None:intergenic
CGAGATGAAGATCCTCTAGG+TGG 0.630001 8.3:-41743305 None:intergenic
TGGGAACTTGCACAATGTGG+AGG 0.632693 8.3:+41744764 MS.gene72962:CDS
AAAGCGGTTACCTGATGGAG+AGG 0.634992 8.3:-41743392 None:intergenic
AGATGAAGATCCTCTAGGTG+GGG 0.637705 8.3:-41743303 None:intergenic
GACGCATCTTCCGAATGTCG+CGG 0.638940 8.3:-41743206 None:intergenic
GGGCATGATAGGACCGCGAG+AGG 0.644689 8.3:-41743363 None:intergenic
GGTCCTTCGTAAAGAGAGAA+CGG 0.646625 8.3:-41743184 None:intergenic
CGGCTTCAAACTCCCTCTCG+CGG 0.649691 8.3:+41743350 MS.gene72962:CDS
GCGGTTACCTGATGGAGAGG+AGG 0.652145 8.3:-41743389 None:intergenic
ATATAGAGGTTTCTGTGGGG+AGG 0.658873 8.3:-41743026 None:intergenic
TGTCTTGAGATAAACACACC+TGG 0.659546 8.3:+41744690 MS.gene72962:CDS
GGCATGATAGGACCGCGAGA+GGG 0.662917 8.3:-41743362 None:intergenic
AAGAGATTACATCTAGACAC+TGG 0.663342 8.3:+41744513 MS.gene72962:CDS
GGTGGGGCCCAACAGCGGTG+CGG 0.665039 8.3:-41743287 None:intergenic
ACGCCGTTCTCTCTTTACGA+AGG 0.670118 8.3:+41743181 MS.gene72962:CDS
TGCCAAATGTGATATTGGTG+AGG 0.688345 8.3:-41744728 None:intergenic
CGGCCTCGCCGTCGACATCG+GGG 0.702901 8.3:-41743128 None:intergenic
CTACCCCGATGTCGACGGCG+AGG 0.714394 8.3:+41743125 MS.gene72962:CDS
AATGGAATATATAATACACA+AGG 0.716304 8.3:-41744923 None:intergenic
CCAGGAGAAGAAGAAGACGA+TGG 0.720934 8.3:+41742931 MS.gene72962:CDS
TGCATATAGAGGTTTCTGTG+GGG 0.755293 8.3:-41743029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAATTTACAAAAATTA+CGG + chr8.3:41744237-41744256 MS.gene72962:intron 10.0%
!!! AAATTTTTTACAAAAGTTAA+TGG - chr8.3:41743478-41743497 None:intergenic 10.0%
!!! AATTCATATCTTTTATTAAT+TGG - chr8.3:41744226-41744245 None:intergenic 10.0%
!! AATATAATTAGTAAACAAGA+AGG + chr8.3:41744312-41744331 MS.gene72962:intron 15.0%
!! AATGAGATGTTAAATTAATA+AGG + chr8.3:41743697-41743716 MS.gene72962:intron 15.0%
!! ATTGAAAATGATAAGTAAAT+AGG - chr8.3:41743503-41743522 None:intergenic 15.0%
!! TGTTATATGAAAATAACTAA+AGG + chr8.3:41744122-41744141 MS.gene72962:intron 15.0%
!! TTAAAAGTAGAAACAATTAT+TGG + chr8.3:41743749-41743768 MS.gene72962:intron 15.0%
!! TTATAAAGTTTAAATGAGTT+GGG - chr8.3:41744081-41744100 None:intergenic 15.0%
!! TTTATAAAGTTTAAATGAGT+TGG - chr8.3:41744082-41744101 None:intergenic 15.0%
!!! AGTAAATTTAAAACTTTTCA+AGG - chr8.3:41744649-41744668 None:intergenic 15.0%
!! AAAATAACTAAAGGAAATCT+AGG + chr8.3:41744131-41744150 MS.gene72962:intron 20.0%
!! AATGGAATATATAATACACA+AGG - chr8.3:41744926-41744945 None:intergenic 20.0%
!! ATATGAATAAGAAGAAAAAG+CGG - chr8.3:41743411-41743430 None:intergenic 20.0%
!! TATTAACTAAAAAGTGAGTA+GGG + chr8.3:41744281-41744300 MS.gene72962:intron 20.0%
!! TCAAAAAGTGACAATTAAAA+AGG + chr8.3:41743794-41743813 MS.gene72962:intron 20.0%
!! TTATTAACTAAAAAGTGAGT+AGG + chr8.3:41744280-41744299 MS.gene72962:intron 20.0%
!!! TTATCCTTTGTTATTTATTG+CGG + chr8.3:41743658-41743677 MS.gene72962:intron 20.0%
!!! TTTTTACAAAAGTTAATGGA+GGG - chr8.3:41743474-41743493 None:intergenic 20.0%
!!! TTTTTTACAAAAGTTAATGG+AGG - chr8.3:41743475-41743494 None:intergenic 20.0%
! AAATAGGTATGAAGTATGAT+GGG + chr8.3:41743842-41743861 MS.gene72962:intron 25.0%
! AAGTGACAATTAAAAAGGAA+CGG + chr8.3:41743799-41743818 MS.gene72962:intron 25.0%
! ATTAACTAAAAAGTGAGTAG+GGG + chr8.3:41744282-41744301 MS.gene72962:intron 25.0%
! TGATGTATATGAACATATGT+TGG + chr8.3:41744012-41744031 MS.gene72962:intron 25.0%
! TTTAACAATGAAAGTTGACT+CGG + chr8.3:41743915-41743934 MS.gene72962:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG - chr8.3:41743604-41743623 None:intergenic 25.0%
!! TTTTACAAAAGTTAATGGAG+GGG - chr8.3:41743473-41743492 None:intergenic 25.0%
!!! TTAAAACTTTTCAAGGAAGA+TGG - chr8.3:41744642-41744661 None:intergenic 25.0%
AAGAGACACTTAAAAAGGAA+CGG - chr8.3:41743563-41743582 None:intergenic 30.0%
AGATGTAATCTCTTCAATGA+TGG - chr8.3:41744507-41744526 None:intergenic 30.0%
GAAATAGGTATGAAGTATGA+TGG + chr8.3:41743841-41743860 MS.gene72962:intron 30.0%
TCCAAAAGAGACACTTAAAA+AGG - chr8.3:41743568-41743587 None:intergenic 30.0%
TTAACTAAAAAGTGAGTAGG+GGG + chr8.3:41744283-41744302 MS.gene72962:intron 30.0%
TTTACAAAAGTTAATGGAGG+GGG - chr8.3:41743472-41743491 None:intergenic 30.0%
! AGTATTTGTTAGGGAGAAAT+AGG + chr8.3:41743826-41743845 MS.gene72962:intron 30.0%
! GAAACAATTATTGGTTGTCT+TGG + chr8.3:41743758-41743777 MS.gene72962:intron 30.0%
!! AGTTCCAAAGTTTCTAAGAT+TGG - chr8.3:41744582-41744601 None:intergenic 30.0%
!! CGCAAAGTCTTTAAAATGTT+CGG - chr8.3:41743151-41743170 None:intergenic 30.0%
!!! TCCTTTTTAAGTGTCTCTTT+TGG + chr8.3:41743564-41743583 MS.gene72962:intron 30.0%
AACAGATTCACTTTCAGAAG+CGG - chr8.3:41744811-41744830 None:intergenic 35.0%
AAGACTCATTGTGCATATAG+AGG - chr8.3:41743043-41743062 None:intergenic 35.0%
AAGAGATTACATCTAGACAC+TGG + chr8.3:41744513-41744532 MS.gene72962:CDS 35.0%
ATTAAACGTCTAGTGTTTCG+TGG + chr8.3:41744867-41744886 MS.gene72962:CDS 35.0%
CATCGTAGAAATCAAAAGCT+TGG - chr8.3:41743101-41743120 None:intergenic 35.0%
CTCTCCGCAATAAATAACAA+AGG - chr8.3:41743665-41743684 None:intergenic 35.0%
CTGTCCAATCTTAGAAACTT+TGG + chr8.3:41744575-41744594 MS.gene72962:CDS 35.0%
TGACAATTAAAAAGGAACGG+AGG + chr8.3:41743802-41743821 MS.gene72962:intron 35.0%
TGCATTGCCAAATGTGATAT+TGG - chr8.3:41744736-41744755 None:intergenic 35.0%
TGTAATGTACACAGTCTCTA+TGG + chr8.3:41744438-41744457 MS.gene72962:intron 35.0%
TGTGGAATTGGAACAATCTT+CGG + chr8.3:41744470-41744489 MS.gene72962:CDS 35.0%
TTGGCAATGCAACTTCTATT+GGG + chr8.3:41744745-41744764 MS.gene72962:CDS 35.0%
TTGGTATGGAGTTGACTAAT+CGG + chr8.3:41743938-41743957 MS.gene72962:intron 35.0%
TTTGGCAATGCAACTTCTAT+TGG + chr8.3:41744744-41744763 MS.gene72962:CDS 35.0%
! AACGGAGGTAGTATTTGTTA+GGG + chr8.3:41743817-41743836 MS.gene72962:intron 35.0%
! TTCCTTTTCAACCGAATCTT+TGG + chr8.3:41744602-41744621 MS.gene72962:CDS 35.0%
!! CAAAGTTTCTAAGATTGGAC+AGG - chr8.3:41744577-41744596 None:intergenic 35.0%
!! CGAAGTTATCAAGTTGAGAT+TGG - chr8.3:41743242-41743261 None:intergenic 35.0%
AAGAAAAAGCGGTTACCTGA+TGG - chr8.3:41743400-41743419 None:intergenic 40.0%
ACTGCTTAATCTGTCTGTGT+TGG - chr8.3:41742971-41742990 None:intergenic 40.0%
AGACACTTAAAAAGGAACGG+AGG - chr8.3:41743560-41743579 None:intergenic 40.0%
AGCCTCACCAATATCACATT+TGG + chr8.3:41744726-41744745 MS.gene72962:CDS 40.0%
AGTTCAAAGCGAAGAAAACC+AGG + chr8.3:41742913-41742932 MS.gene72962:CDS 40.0%
ATATGGCATAAGAGAGAGTC+TGG - chr8.3:41742997-41743016 None:intergenic 40.0%
ATCACCAATTACTACTCCCT+CGG - chr8.3:41744159-41744178 None:intergenic 40.0%
ATGTGATATTGGTGAGGCTA+AGG - chr8.3:41744725-41744744 None:intergenic 40.0%
CTCATAGGTATCTTCATCTC+TGG + chr8.3:41743067-41743086 MS.gene72962:CDS 40.0%
GAACGGAGGTAGTATTTGTT+AGG + chr8.3:41743816-41743835 MS.gene72962:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG - chr8.3:41743559-41743578 None:intergenic 40.0%
GGCAGAGAGAAGGATATTAA+TGG - chr8.3:41744556-41744575 None:intergenic 40.0%
GTGCATATAGAGGTTTCTGT+GGG - chr8.3:41743033-41743052 None:intergenic 40.0%
GTTTCGTGGTTATACAGCAA+AGG + chr8.3:41744881-41744900 MS.gene72962:CDS 40.0%
TATTGGGAACTTGCACAATG+TGG + chr8.3:41744761-41744780 MS.gene72962:CDS 40.0%
TCTCTATGGTGAGATCTTTG+TGG + chr8.3:41744452-41744471 MS.gene72962:CDS 40.0%
TGCATATAGAGGTTTCTGTG+GGG - chr8.3:41743032-41743051 None:intergenic 40.0%
TGCCAAATGTGATATTGGTG+AGG - chr8.3:41744731-41744750 None:intergenic 40.0%
TGGTGAGATCTTTGTGGAAT+TGG + chr8.3:41744458-41744477 MS.gene72962:CDS 40.0%
TGTCTTGAGATAAACACACC+TGG + chr8.3:41744690-41744709 MS.gene72962:CDS 40.0%
TGTGCATATAGAGGTTTCTG+TGG - chr8.3:41743034-41743053 None:intergenic 40.0%
! AAAGGAAATCTAGGATCCGA+GGG + chr8.3:41744140-41744159 MS.gene72962:intron 40.0%
! ACATCTAGACACTGGTAATG+TGG + chr8.3:41744521-41744540 MS.gene72962:CDS 40.0%
! AGTTTAAATGAGTTGGGCTC+CGG - chr8.3:41744075-41744094 None:intergenic 40.0%
! CAATGAGTCTTGTCTCTCAT+AGG + chr8.3:41743052-41743071 MS.gene72962:CDS 40.0%
! TAAAGGAAATCTAGGATCCG+AGG + chr8.3:41744139-41744158 MS.gene72962:intron 40.0%
!! ACAATGAAAGTTGACTCGGT+TGG + chr8.3:41743919-41743938 MS.gene72962:intron 40.0%
AGATGAAGATCCTCTAGGTG+GGG - chr8.3:41743306-41743325 None:intergenic 45.0%
ATATAGAGGTTTCTGTGGGG+AGG - chr8.3:41743029-41743048 None:intergenic 45.0%
CACCAAAAAGATCCCCACAT+CGG - chr8.3:41743990-41744009 None:intergenic 45.0%
CCTAAGCTTGGCCAAAGATT+CGG - chr8.3:41744616-41744635 None:intergenic 45.0%
CGAATCTTTGGCCAAGCTTA+GGG + chr8.3:41744614-41744633 MS.gene72962:CDS 45.0%
CTTGGAGGAGAGTGAGTAAA+GGG - chr8.3:41744836-41744855 None:intergenic 45.0%
GAAGAAGAAGACGATGGTCA+AGG + chr8.3:41742937-41742956 MS.gene72962:CDS 45.0%
GAGATGAAGATCCTCTAGGT+GGG - chr8.3:41743307-41743326 None:intergenic 45.0%
GGTCCTTCGTAAAGAGAGAA+CGG - chr8.3:41743187-41743206 None:intergenic 45.0%
GTTTAATGCCAGAGAGAGCT+TGG - chr8.3:41744854-41744873 None:intergenic 45.0%
! AACATATGTTGGTGCTCCCT+GGG + chr8.3:41744023-41744042 MS.gene72962:intron 45.0%
! GGCCAAAGATTCGGTTGAAA+AGG - chr8.3:41744607-41744626 None:intergenic 45.0%
! TGGGGAGGAAGGAAAGTATA+TGG - chr8.3:41743014-41743033 None:intergenic 45.0%
!! GAAAGTTGACTCGGTTGGTA+TGG + chr8.3:41743924-41743943 MS.gene72962:intron 45.0%
!! TTAGTTAATAATAAATTATA+AGG - chr8.3:41744271-41744290 None:intergenic 5.0%
AAAGCGGTTACCTGATGGAG+AGG - chr8.3:41743395-41743414 None:intergenic 50.0%
AAGCTCACCGACATCAACAC+AGG - chr8.3:41744052-41744071 None:intergenic 50.0%
ACATCAACACAGGTCACCCA+GGG - chr8.3:41744042-41744061 None:intergenic 50.0%
ACCTGATGGAGAGGAGGTTA+GGG - chr8.3:41743386-41743405 None:intergenic 50.0%
ACGCCGTTCTCTCTTTACGA+AGG + chr8.3:41743181-41743200 MS.gene72962:CDS 50.0%
AGAGGAGGTTAGGGCATGAT+AGG - chr8.3:41743377-41743396 None:intergenic 50.0%
AGATTGGACAGGCAGAGAGA+AGG - chr8.3:41744566-41744585 None:intergenic 50.0%
CCAGGAGAAGAAGAAGACGA+TGG + chr8.3:41742931-41742950 MS.gene72962:CDS 50.0%
CCATCGTCTTCTTCTTCTCC+TGG - chr8.3:41742934-41742953 None:intergenic 50.0%
CCGAATCTTTGGCCAAGCTT+AGG + chr8.3:41744613-41744632 MS.gene72962:CDS 50.0%
CGAGATGAAGATCCTCTAGG+TGG - chr8.3:41743308-41743327 None:intergenic 50.0%
GAATACTACCCCGATGTCGA+CGG + chr8.3:41743120-41743139 MS.gene72962:CDS 50.0%
GAGCGAGATGAAGATCCTCT+AGG - chr8.3:41743311-41743330 None:intergenic 50.0%
GCTTGGAGGAGAGTGAGTAA+AGG - chr8.3:41744837-41744856 None:intergenic 50.0%
GGAAGATGGAACCCTAAGCT+TGG - chr8.3:41744628-41744647 None:intergenic 50.0%
GGATCCGAGGGAGTAGTAAT+TGG + chr8.3:41744152-41744171 MS.gene72962:intron 50.0%
TAATGCCAGAGAGAGCTTGG+AGG - chr8.3:41744851-41744870 None:intergenic 50.0%
TACCTGATGGAGAGGAGGTT+AGG - chr8.3:41743387-41743406 None:intergenic 50.0%
TGGGAACTTGCACAATGTGG+AGG + chr8.3:41744764-41744783 MS.gene72962:CDS 50.0%
TGTTGATGTCGGTGAGCTTC+CGG + chr8.3:41744053-41744072 MS.gene72962:intron 50.0%
! AGGCTAAGGTACTTGAGACC+AGG - chr8.3:41744711-41744730 None:intergenic 50.0%
! CGATGTGGGGATCTTTTTGG+TGG + chr8.3:41743988-41744007 MS.gene72962:intron 50.0%
! GAACATATGTTGGTGCTCCC+TGG + chr8.3:41744022-41744041 MS.gene72962:intron 50.0%
! TGGGTGACCTGTGTTGATGT+CGG + chr8.3:41744042-41744061 MS.gene72962:intron 50.0%
AAAGATCCCCACATCGGCCA+TGG - chr8.3:41743984-41744003 None:intergenic 55.0%
AAGATCCCCACATCGGCCAT+GGG - chr8.3:41743983-41744002 None:intergenic 55.0%
ACGCATCTTCCGAATGTCGC+GGG - chr8.3:41743208-41743227 None:intergenic 55.0%
ACTCTCCTCCAAGCTCTCTC+TGG + chr8.3:41744843-41744862 MS.gene72962:CDS 55.0%
AGAGGTTTCTGTGGGGAGGA+AGG - chr8.3:41743025-41743044 None:intergenic 55.0%
AGCCGTGAGATCAACTCCCA+TGG + chr8.3:41743964-41743983 MS.gene72962:intron 55.0%
ATCAACTCCCATGGCCGATG+TGG + chr8.3:41743973-41743992 MS.gene72962:intron 55.0%
CGGAAGATGCGTCTCTCTTG+CGG + chr8.3:41743216-41743235 MS.gene72962:CDS 55.0%
CTCGCTCTCTTCTCGTCTGA+GGG + chr8.3:41743324-41743343 MS.gene72962:CDS 55.0%
CTCTTCTCGTCTGAGGGTGA+CGG + chr8.3:41743330-41743349 MS.gene72962:CDS 55.0%
CTGAACGCTCTGTTGACACG+TGG + chr8.3:41743262-41743281 MS.gene72962:CDS 55.0%
GACATCAACACAGGTCACCC+AGG - chr8.3:41744043-41744062 None:intergenic 55.0%
GACGCATCTTCCGAATGTCG+CGG - chr8.3:41743209-41743228 None:intergenic 55.0%
TACGAAGGACCCGCGACATT+CGG + chr8.3:41743196-41743215 MS.gene72962:CDS 55.0%
TCAACTCCCATGGCCGATGT+GGG + chr8.3:41743974-41743993 MS.gene72962:intron 55.0%
TCTCGCTCTCTTCTCGTCTG+AGG + chr8.3:41743323-41743342 MS.gene72962:CDS 55.0%
! GGCCATGGGAGTTGATCTCA+CGG - chr8.3:41743969-41743988 None:intergenic 55.0%
! GGCCGATGTGGGGATCTTTT+TGG + chr8.3:41743985-41744004 MS.gene72962:intron 55.0%
CAACTCCCATGGCCGATGTG+GGG + chr8.3:41743975-41743994 MS.gene72962:intron 60.0%
CGGCTTCAAACTCCCTCTCG+CGG + chr8.3:41743350-41743369 MS.gene72962:CDS 60.0%
GCCCTAACCTCCTCTCCATC+AGG + chr8.3:41743382-41743401 MS.gene72962:CDS 60.0%
GCGGTTACCTGATGGAGAGG+AGG - chr8.3:41743392-41743411 None:intergenic 60.0%
GGCATGATAGGACCGCGAGA+GGG - chr8.3:41743365-41743384 None:intergenic 60.0%
ACGTGGATCCGCACCGCTGT+TGG + chr8.3:41743279-41743298 MS.gene72962:CDS 65.0%
CGTGGATCCGCACCGCTGTT+GGG + chr8.3:41743280-41743299 MS.gene72962:CDS 65.0%
CTCTAGGTGGGGCCCAACAG+CGG - chr8.3:41743295-41743314 None:intergenic 65.0%
GGGCATGATAGGACCGCGAG+AGG - chr8.3:41743366-41743385 None:intergenic 65.0%
TTCGGCCTCGCCGTCGACAT+CGG - chr8.3:41743133-41743152 None:intergenic 65.0%
CGCTGTTGGGCCCCACCTAG+AGG + chr8.3:41743293-41743312 MS.gene72962:CDS 70.0%
CTACCCCGATGTCGACGGCG+AGG + chr8.3:41743125-41743144 MS.gene72962:CDS 70.0%
TCGGCCTCGCCGTCGACATC+GGG - chr8.3:41743132-41743151 None:intergenic 70.0%
CGGCCTCGCCGTCGACATCG+GGG - chr8.3:41743131-41743150 None:intergenic 75.0%
GGTGGGGCCCAACAGCGGTG+CGG - chr8.3:41743290-41743309 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 41742904 41744953 41742904 ID=MS.gene72962
chr8.3 mRNA 41742904 41744953 41742904 ID=MS.gene72962.t1;Parent=MS.gene72962
chr8.3 exon 41742904 41743403 41742904 ID=MS.gene72962.t1.exon1;Parent=MS.gene72962.t1
chr8.3 CDS 41742904 41743403 41742904 ID=cds.MS.gene72962.t1;Parent=MS.gene72962.t1
chr8.3 exon 41744452 41744953 41744452 ID=MS.gene72962.t1.exon2;Parent=MS.gene72962.t1
chr8.3 CDS 41744452 41744953 41744452 ID=cds.MS.gene72962.t1;Parent=MS.gene72962.t1
Gene Sequence

>MS.gene72962

ATGGAGGAAAGTTCAAAGCGAAGAAAACCAGGAGAAGAAGAAGACGATGGTCAAGGCTGTAACACCAACACAGACAGATTAAGCAGTCTGCCAGACTCTCTCTTATGCCATATACTTTCCTTCCTCCCCACAGAAACCTCTATATGCACAATGAGTCTTGTCTCTCATAGGTATCTTCATCTCTGGAAATATCTCCAAGCTTTTGATTTCTACGATGAATACTACCCCGATGTCGACGGCGAGGCCGAACATTTTAAAGACTTTGCGATATTCGTCAACGCCGTTCTCTCTTTACGAAGGACCCGCGACATTCGGAAGATGCGTCTCTCTTGCGGCCAATCTCAACTTGATAACTTCGCTGAACGCTCTGTTGACACGTGGATCCGCACCGCTGTTGGGCCCCACCTAGAGGATCTTCATCTCGCTCTCTTCTCGTCTGAGGGTGACGGCTTCAAACTCCCTCTCGCGGTCCTATCATGCCCTAACCTCCTCTCCATCAGGTAACCGCTTTTTCTTCTTATTCATATTTGAGTAATAACAGTATTTATTTTAGTCTTTTTTATAACCCCCTCCATTAACTTTTGTAAAAAATTTCTCCTATTTACTTATCATTTTCAATGTCATTGTTTTCTCAATAATACTCTTGTTTACTCCCTCCGTTCCTTTTTAAGTGTCTCTTTTGGAGAAATATTTTGTTCCTATTTAACTGTCACTTTCAAAGTTCAATGCATCATTAAATGTTGTTTTATCAATATTATCCTTTGTTATTTATTGCGGAGAGAGAAATATATGAAATGAGATGTTAAATTAATAAGGTCGTTATAGTAAAAGTATAACTTATTGCATTAAAAGTAGAAACAATTATTGGTTGTCTTGGTTTGTGTAAAATGTCAAAAAGTGACAATTAAAAAGGAACGGAGGTAGTATTTGTTAGGGAGAAATAGGTATGAAGTATGATGGGATAACAAATGATTAAAATTATTTTATGAAAAAGTAACAAGATTTATTGATTTTAACAATGAAAGTTGACTCGGTTGGTATGGAGTTGACTAATCGGCAAAGCCGTGAGATCAACTCCCATGGCCGATGTGGGGATCTTTTTGGTGGTTGATGTATATGAACATATGTTGGTGCTCCCTGGGTGACCTGTGTTGATGTCGGTGAGCTTCCGGAGCCCAACTCATTTAAACTTTATAAAAAAACATTTATTGATTGTTTTGTTATATGAAAATAACTAAAGGAAATCTAGGATCCGAGGGAGTAGTAATTGGTGATTTTACGATTATACTAGTGAAGCAAAGACATTTTCAATTAACAAACCAATTAATAAAAGATATGAATTTACAAAAATTACGGTTTTTAGTCCTTATAATTTATTATTAACTAAAAAGTGAGTAGGGGGCGTAGAAATATAATTAGTAAACAAGAAGGTAATTTAGAGCTACAAAGATATTTCAGTCATTTTTTTTACTTATTATTTGCAAACTTGTTCTTGTTAAATGTGACATGATAAATGATGATAACATAAGATTTATGTAATGTACACAGTCTCTATGGTGAGATCTTTGTGGAATTGGAACAATCTTCGGCTGTTTGTTTACCATCATTGAAGAGATTACATCTAGACACTGGTAATGTGGATGTGAATGCCATTAATATCCTTCTCTCTGCCTGTCCAATCTTAGAAACTTTGGAACTTTCCTTTTCAACCGAATCTTTGGCCAAGCTTAGGGTTCCATCTTCCTTGAAAAGTTTTAAATTTACTATAGAGAATGACATTGAAGTTTGTCTTGAGATAAACACACCTGGTCTCAAGTACCTTAGCCTCACCAATATCACATTTGGCAATGCAACTTCTATTGGGAACTTGCACAATGTGGAGGAAGCATATCTTGATGTACTCTCCGCTTCTGAAAGTGAATCTGTTGACCCTTTACTCACTCTCCTCCAAGCTCTCTCTGGCATTAAACGTCTAGTGTTTCGTGGTTATACAGCAAAGGTGAGTGATATTTTCATTATCCTTGTGTATTATATATTCCATTATATGTAA

Protein sequence

>MS.gene72962.t1

MEESSKRRKPGEEEDDGQGCNTNTDRLSSLPDSLLCHILSFLPTETSICTMSLVSHRYLHLWKYLQAFDFYDEYYPDVDGEAEHFKDFAIFVNAVLSLRRTRDIRKMRLSCGQSQLDNFAERSVDTWIRTAVGPHLEDLHLALFSSEGDGFKLPLAVLSCPNLLSISLYGEIFVELEQSSAVCLPSLKRLHLDTGNVDVNAINILLSACPILETLELSFSTESLAKLRVPSSLKSFKFTIENDIEVCLEINTPGLKYLSLTNITFGNATSIGNLHNVEEAYLDVLSASESESVDPLLTLLQALSGIKRLVFRGYTAKVSDIFIILVYYIFHYM