AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69407


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69407.t1 MTR_3g082890 72.059 408 91 6 1 392 81 481 0.0 552
MS.gene69407.t1 MTR_3g082890 65.843 445 92 7 1 392 1 438 0.0 532
MS.gene69407.t1 MTR_7g098510 44.784 393 199 11 2 389 3 382 1.03e-96 296
MS.gene69407.t1 MTR_1g041245 47.105 380 181 12 17 389 11 377 1.10e-94 291
MS.gene69407.t1 MTR_2g020180 65.333 225 54 2 180 393 2 213 1.25e-88 269
MS.gene69407.t1 MTR_7g098480 41.985 393 208 10 2 389 3 380 4.55e-85 269
MS.gene69407.t1 MTR_7g098570 38.255 447 255 10 1 442 7 437 1.00e-84 268
MS.gene69407.t1 MTR_7g115270 41.895 401 190 11 7 382 4 386 1.56e-80 254
MS.gene69407.t1 MTR_7g032380 42.746 386 172 13 17 394 11 355 1.58e-80 253
MS.gene69407.t1 MTR_7g056433 42.228 386 193 11 17 389 12 380 2.91e-80 254
MS.gene69407.t1 MTR_0543s0010 41.995 381 197 10 17 392 86 447 1.32e-79 254
MS.gene69407.t1 MTR_0543s0010 68.750 48 15 0 17 64 12 59 6.80e-13 70.9
MS.gene69407.t1 MTR_7g033990 42.526 388 184 15 17 389 11 374 2.10e-79 252
MS.gene69407.t1 MTR_7g032370 42.895 373 183 11 29 394 2 351 7.14e-79 249
MS.gene69407.t1 MTR_7g088260 41.114 377 199 10 17 386 91 451 3.15e-78 251
MS.gene69407.t1 MTR_0492s0020 42.049 371 194 9 17 385 86 437 8.29e-78 249
MS.gene69407.t1 MTR_0492s0020 68.750 48 15 0 17 64 12 59 6.13e-13 70.9
MS.gene69407.t1 MTR_3g036250 40.789 380 199 10 13 389 1 357 4.06e-77 244
MS.gene69407.t1 MTR_7g034115 43.194 382 196 11 17 392 11 377 5.09e-77 245
MS.gene69407.t1 MTR_7g033915 42.448 384 172 14 17 389 11 356 7.61e-77 244
MS.gene69407.t1 MTR_3g114200 78.710 155 30 2 1 152 1 155 3.27e-74 230
MS.gene69407.t1 MTR_7g081290 76.871 147 26 3 248 392 113 253 3.73e-73 231
MS.gene69407.t1 MTR_7g081290 65.957 141 42 3 1 138 1 138 1.08e-50 172
MS.gene69407.t1 MTR_3g108560 41.176 374 202 11 14 384 17 375 3.90e-72 233
MS.gene69407.t1 MTR_3g040700 35.784 408 228 9 6 410 32 408 2.29e-68 224
MS.gene69407.t1 MTR_3g108150 39.737 380 208 11 17 389 13 378 5.11e-68 222
MS.gene69407.t1 MTR_5g008950 37.135 377 210 13 19 389 1 356 8.33e-62 205
MS.gene69407.t1 MTR_3g023630 36.198 384 218 12 12 389 3 365 1.11e-61 205
MS.gene69407.t1 MTR_7g056420 39.192 421 208 13 17 425 9 393 7.66e-61 214
MS.gene69407.t1 MTR_7g056430 39.192 421 208 13 17 425 9 393 1.34e-60 214
MS.gene69407.t1 MTR_5g008920 35.768 397 222 12 1 389 1 372 2.46e-60 202
MS.gene69407.t1 MTR_3g113770 53.571 224 37 5 133 354 175 333 3.50e-58 195
MS.gene69407.t1 MTR_3g467400 37.692 390 192 10 17 389 3 358 4.71e-58 195
MS.gene69407.t1 MTR_3g105060 36.745 381 203 11 17 389 14 364 8.40e-56 189
MS.gene69407.t1 MTR_2g020170 72.581 124 31 3 11 131 16 139 1.07e-49 166
MS.gene69407.t1 MTR_5g013500 35.476 389 184 14 17 384 9 351 5.04e-49 171
MS.gene69407.t1 MTR_7g007080 35.135 370 199 11 17 365 4 353 4.27e-48 169
MS.gene69407.t1 MTR_7g034110 37.500 360 142 15 17 359 11 304 1.55e-47 167
MS.gene69407.t1 MTR_5g012840 36.313 358 153 12 40 385 12 306 9.57e-47 164
MS.gene69407.t1 MTR_3g108560 39.189 296 165 10 14 306 17 300 1.92e-46 163
MS.gene69407.t1 MTR_3g107120 32.331 399 217 15 17 388 9 381 3.89e-45 162
MS.gene69407.t1 MTR_7g114710 33.952 377 211 10 17 389 13 355 5.38e-45 160
MS.gene69407.t1 MTR_7g056020 35.340 382 212 13 14 389 13 365 8.68e-45 166
MS.gene69407.t1 MTR_2g007450 32.151 423 227 13 15 394 14 419 1.15e-44 161
MS.gene69407.t1 MTR_4g134150 45.763 236 109 8 17 251 14 231 1.92e-44 155
MS.gene69407.t1 MTR_7g056277 34.908 381 208 15 17 383 259 613 8.64e-44 162
MS.gene69407.t1 MTR_3g113785 84.615 91 11 1 267 354 1 91 1.15e-43 149
MS.gene69407.t1 MTR_7g034120 37.160 331 173 16 81 397 1 310 1.23e-43 155
MS.gene69407.t1 MTR_7g056287 34.646 381 209 15 17 383 3 357 8.41e-43 155
MS.gene69407.t1 MTR_3g107100 32.520 369 206 12 17 365 11 356 9.94e-43 155
MS.gene69407.t1 MTR_3g115430 59.055 127 46 2 267 392 1 122 1.65e-42 146
MS.gene69407.t1 MTR_3g107160 32.432 407 218 17 14 394 7 382 3.38e-42 154
MS.gene69407.t1 MTR_5g083890 33.729 421 223 17 13 394 1 404 3.43e-42 156
MS.gene69407.t1 MTR_5g058100 34.264 394 209 15 17 388 9 374 8.89e-42 152
MS.gene69407.t1 MTR_1g108820 31.008 387 221 13 17 382 8 369 5.14e-41 150
MS.gene69407.t1 MTR_7g026500 32.840 405 217 16 17 392 14 392 5.44e-41 150
MS.gene69407.t1 MTR_3g087260 39.726 292 165 8 95 386 165 445 9.79e-41 151
MS.gene69407.t1 MTR_3g087260 40.415 193 97 5 12 204 7 181 5.91e-26 110
MS.gene69407.t1 MTR_7g060470 32.208 385 211 14 17 372 3 366 1.72e-40 149
MS.gene69407.t1 MTR_4g098590 33.333 366 213 12 19 365 1 354 3.95e-40 148
MS.gene69407.t1 MTR_6g022500 31.510 384 229 13 17 386 101 464 3.84e-39 147
MS.gene69407.t1 MTR_6g040270 31.458 391 233 15 19 394 10 380 4.89e-39 145
MS.gene69407.t1 MTR_3g109982 40.146 274 143 10 134 396 220 483 1.03e-38 149
MS.gene69407.t1 MTR_3g109982 34.948 289 172 10 11 298 7 280 2.19e-32 130
MS.gene69407.t1 MTR_1g066830 30.051 396 242 13 17 394 8 386 1.13e-38 144
MS.gene69407.t1 MTR_4g080610 32.546 381 210 15 19 392 14 354 1.22e-38 144
MS.gene69407.t1 MTR_1g085120 31.525 387 223 12 17 383 92 456 1.42e-38 145
MS.gene69407.t1 MTR_6g011460 32.603 365 211 12 17 368 46 388 4.20e-38 143
MS.gene69407.t1 MTR_1g085120 31.525 387 223 12 17 383 167 531 4.82e-38 145
MS.gene69407.t1 MTR_5g058000 32.632 380 226 12 17 388 8 365 5.34e-38 142
MS.gene69407.t1 MTR_8g085430 46.500 200 90 6 17 204 11 205 6.75e-38 140
MS.gene69407.t1 MTR_8g085430 48.246 114 55 4 284 394 213 325 8.13e-25 104
MS.gene69407.t1 MTR_5g073420 30.252 357 218 11 17 365 11 344 1.42e-37 141
MS.gene69407.t1 MTR_1089s0010 30.964 394 239 14 14 394 5 378 1.65e-37 141
MS.gene69407.t1 MTR_1g053025 31.078 399 229 15 17 389 2 380 4.03e-37 140
MS.gene69407.t1 MTR_6g045333 32.653 392 222 13 15 383 59 431 8.26e-37 140
MS.gene69407.t1 MTR_7g056447 46.961 181 90 4 17 195 9 185 2.57e-36 135
MS.gene69407.t1 MTR_1g107385 31.527 406 235 14 17 394 32 422 3.92e-36 138
MS.gene69407.t1 MTR_7g034090 31.351 370 165 9 17 375 4 295 5.58e-36 137
MS.gene69407.t1 MTR_4g039440 30.827 399 234 13 17 394 34 411 6.03e-35 134
MS.gene69407.t1 MTR_1g108800 32.732 388 197 13 17 394 8 341 7.31e-35 133
MS.gene69407.t1 MTR_2g007500 33.824 340 194 11 17 344 14 334 1.70e-34 132
MS.gene69407.t1 MTR_7g033945 47.904 167 75 7 17 175 11 173 2.54e-34 127
MS.gene69407.t1 MTR_2g007550 29.178 377 182 13 6 365 3 311 4.34e-34 130
MS.gene69407.t1 MTR_3g026920 28.180 401 198 12 17 365 19 381 6.69e-34 131
MS.gene69407.t1 MTR_1g043170 64.286 84 30 0 309 392 2 85 6.89e-33 120
MS.gene69407.t1 MTR_7g075820 30.244 410 232 16 17 394 6 393 7.01e-33 128
MS.gene69407.t1 MTR_5g045170 31.429 385 221 15 1 367 1 360 1.22e-32 128
MS.gene69407.t1 MTR_3g110010 34.948 289 172 10 11 298 7 280 4.29e-32 130
MS.gene69407.t1 MTR_3g110010 36.782 174 103 6 134 306 220 387 3.56e-12 68.9
MS.gene69407.t1 MTR_7g055943 29.440 411 237 13 17 399 40 425 1.21e-31 125
MS.gene69407.t1 MTR_5g073370 30.245 367 222 14 13 365 1 347 2.14e-31 124
MS.gene69407.t1 MTR_0009s0080 30.534 393 228 15 15 384 16 386 2.56e-31 125
MS.gene69407.t1 MTR_2g005990 30.318 409 234 17 17 394 6 394 4.34e-31 123
MS.gene69407.t1 MTR_5g007410 31.552 393 232 13 19 392 28 402 1.71e-30 123
MS.gene69407.t1 MTR_3g071850 30.357 392 241 13 15 388 22 399 1.78e-30 125
MS.gene69407.t1 MTR_3g113782 64.706 85 30 0 1 85 1 85 3.41e-30 112
MS.gene69407.t1 MTR_3g099830 29.574 399 223 13 17 394 12 373 3.98e-30 120
MS.gene69407.t1 MTR_7g007340 30.334 389 208 13 14 389 10 348 4.70e-30 120
MS.gene69407.t1 MTR_6g044572 29.854 412 210 15 17 386 2 376 5.22e-30 120
MS.gene69407.t1 MTR_2g007400 29.655 435 232 19 1 394 1 402 7.51e-30 120
MS.gene69407.t1 MTR_6g044560 29.216 421 220 14 17 394 178 563 9.15e-30 122
MS.gene69407.t1 MTR_7g033940 49.231 130 60 3 1 125 75 203 4.41e-29 114
MS.gene69407.t1 MTR_7g022105 29.457 387 237 11 13 383 45 411 1.90e-28 117
MS.gene69407.t1 MTR_7g021990 29.897 388 240 12 13 386 44 413 3.72e-28 116
MS.gene69407.t1 MTR_2g007360 29.216 421 223 19 1 394 1 373 4.82e-28 114
MS.gene69407.t1 MTR_7g021950 29.897 388 240 12 13 386 44 413 4.94e-28 116
MS.gene69407.t1 MTR_7g083740 28.382 377 224 12 1 368 1 340 6.68e-28 114
MS.gene69407.t1 MTR_2g008320 31.649 376 202 15 17 365 52 399 9.26e-28 115
MS.gene69407.t1 MTR_5g045510 29.737 380 226 12 17 386 12 360 3.34e-27 112
MS.gene69407.t1 MTR_2g008310 29.759 373 207 12 17 365 2 343 6.28e-26 109
MS.gene69407.t1 MTR_5g061680 30.556 324 178 11 17 333 11 294 1.26e-25 107
MS.gene69407.t1 MTR_6g022360 29.487 390 232 13 17 391 43 404 1.65e-25 108
MS.gene69407.t1 MTR_1g085120 31.699 306 173 10 17 302 179 468 1.90e-25 108
MS.gene69407.t1 MTR_5g039450 28.906 384 208 16 15 375 4 345 3.30e-25 106
MS.gene69407.t1 MTR_2g036470 30.645 372 213 14 17 365 14 363 8.50e-25 105
MS.gene69407.t1 MTR_1g108820 30.945 307 175 11 17 302 8 298 8.52e-25 105
MS.gene69407.t1 MTR_5g031970 29.167 384 207 13 15 386 14 344 1.76e-24 104
MS.gene69407.t1 MTR_5g084070 27.628 409 229 13 12 370 8 399 2.05e-24 105
MS.gene69407.t1 MTR_8g077460 27.708 397 236 14 17 394 10 374 1.78e-23 101
MS.gene69407.t1 MTR_5g073340 29.254 335 194 10 17 342 8 308 8.44e-23 98.6
MS.gene69407.t1 MTR_7g098590 58.140 86 35 1 14 99 15 99 1.03e-22 94.0
MS.gene69407.t1 MTR_5g080710 26.277 411 232 14 15 370 31 425 1.92e-22 99.8
MS.gene69407.t1 MTR_8g062310 28.474 439 227 18 15 397 23 430 3.77e-22 98.6
MS.gene69407.t1 MTR_4g056040 26.327 452 221 16 14 367 6 443 6.75e-22 98.6
MS.gene69407.t1 MTR_6g022520 28.793 323 191 11 81 386 1 301 1.87e-21 95.1
MS.gene69407.t1 MTR_5g065100 28.643 398 213 16 22 402 13 356 2.32e-21 96.3
MS.gene69407.t1 MTR_7g022060 25.995 377 200 10 17 384 10 316 2.43e-21 94.7
MS.gene69407.t1 MTR_4g056030 25.926 432 224 17 14 370 6 416 3.83e-21 95.9
MS.gene69407.t1 MTR_5g063950 28.032 371 224 12 22 384 13 348 5.82e-21 94.4
MS.gene69407.t1 MTR_5g039490 29.610 385 220 12 17 388 20 366 6.86e-21 94.4
MS.gene69407.t1 MTR_5g039470 28.947 342 211 12 34 360 2 326 1.02e-20 93.2
MS.gene69407.t1 MTR_1g492880 53.488 86 39 1 12 96 1 86 1.71e-20 86.3
MS.gene69407.t1 MTR_1g492880 52.874 87 40 1 12 97 1 87 2.77e-20 86.3
MS.gene69407.t1 MTR_5g054920 40.678 118 60 3 253 369 73 181 2.83e-20 89.0
MS.gene69407.t1 MTR_7g021930 25.729 377 201 10 17 384 10 316 4.30e-20 91.3
MS.gene69407.t1 MTR_7g021970 25.729 377 201 10 17 384 10 316 4.30e-20 91.3
MS.gene69407.t1 MTR_4g056020 26.303 422 229 15 14 367 6 413 8.94e-20 91.7
MS.gene69407.t1 MTR_3g107940 40.152 132 62 3 260 389 88 204 1.67e-19 89.7
MS.gene69407.t1 MTR_7g007370 29.288 379 190 15 1 364 1 316 1.94e-19 89.7
MS.gene69407.t1 MTR_5g008910 30.973 226 133 7 181 389 74 293 1.23e-18 86.7
MS.gene69407.t1 MTR_8g468810 27.354 446 244 14 17 392 25 460 2.54e-18 87.4
MS.gene69407.t1 MTR_8g014160 27.792 403 228 17 15 384 39 411 3.00e-18 87.0
MS.gene69407.t1 MTR_1g095750 53.659 82 35 2 17 96 46 126 5.31e-18 80.9
MS.gene69407.t1 MTR_4g055580 24.295 461 231 16 14 370 97 543 5.67e-18 87.0
MS.gene69407.t1 MTR_2g083840 26.988 415 224 14 17 365 21 422 9.87e-18 85.5
MS.gene69407.t1 MTR_8g468760 26.728 434 240 17 14 392 6 416 7.17e-17 82.8
MS.gene69407.t1 MTR_3g108140 42.857 98 53 1 298 392 45 142 8.74e-17 78.6
MS.gene69407.t1 MTR_1g038710 25.943 424 234 13 17 370 19 432 1.28e-16 82.0
MS.gene69407.t1 MTR_7g056280 32.447 188 108 7 188 365 368 546 1.73e-16 82.4
MS.gene69407.t1 MTR_3g095600 34.555 191 93 8 17 200 4 169 2.82e-16 79.7
MS.gene69407.t1 MTR_8g058965 31.429 245 133 12 1 219 1 236 3.19e-16 80.9
MS.gene69407.t1 MTR_3g095640 33.526 173 94 6 1 157 1 168 1.03e-15 75.5
MS.gene69407.t1 MTR_8g445780 26.551 403 203 16 17 351 13 390 1.13e-15 79.0
MS.gene69407.t1 MTR_4g093690 30.952 210 123 9 1 197 1 201 1.37e-15 77.0
MS.gene69407.t1 MTR_2g007530 32.184 174 84 4 17 156 19 192 3.27e-15 77.0
MS.gene69407.t1 MTR_8g468910 32.117 137 87 4 17 149 48 182 3.65e-15 77.4
MS.gene69407.t1 MTR_3g106960 31.795 195 102 9 182 368 3 174 3.66e-15 75.1
MS.gene69407.t1 MTR_5g061410 30.645 310 152 13 13 302 1 267 3.76e-15 75.9
MS.gene69407.t1 MTR_3g099900 40.288 139 74 4 14 149 15 147 7.36e-15 76.3
MS.gene69407.t1 MTR_1377s0010 37.037 108 58 3 258 365 30 127 1.73e-14 70.9
MS.gene69407.t1 MTR_7g068570 29.677 155 105 2 13 166 1 152 5.22e-14 70.5
MS.gene69407.t1 MTR_4g032730 31.000 200 121 7 14 198 12 209 8.25e-14 73.6
MS.gene69407.t1 MTR_7g021630 31.544 149 91 2 1 149 1 138 8.73e-14 72.8
MS.gene69407.t1 MTR_7g021630 31.544 149 91 2 1 149 1 138 9.54e-14 72.8
MS.gene69407.t1 MTR_2g082800 32.836 201 122 7 4 199 17 209 1.11e-13 72.8
MS.gene69407.t1 MTR_6g092430 32.000 175 109 5 14 180 7 179 2.03e-13 72.0
MS.gene69407.t1 MTR_4g024770 47.761 67 33 1 2 68 11 75 2.27e-13 65.5
MS.gene69407.t1 MTR_5g021550 34.000 150 80 6 14 147 16 162 4.44e-13 67.4
MS.gene69407.t1 MTR_4g096730 45.833 72 35 1 318 389 12 79 5.56e-13 65.1
MS.gene69407.t1 MTR_4g047950 29.787 188 127 4 17 200 13 199 5.78e-13 70.5
MS.gene69407.t1 MTR_3g071790 28.000 200 117 8 171 359 19 202 7.66e-13 67.8
MS.gene69407.t1 MTR_8g014260 32.919 161 94 5 1 148 1 160 1.06e-12 70.1
MS.gene69407.t1 MTR_5g087940 35.294 136 82 3 14 149 23 152 1.11e-12 69.7
MS.gene69407.t1 MTR_7g033470 52.113 71 31 2 17 84 14 84 1.69e-12 65.1
MS.gene69407.t1 MTR_4g014260 36.232 138 81 3 14 149 23 155 1.73e-12 69.3
MS.gene69407.t1 MTR_2g101950 30.435 184 115 6 3 182 69 243 1.77e-12 68.9
MS.gene69407.t1 MTR_4g014260 36.232 138 81 3 14 149 23 155 1.81e-12 69.3
MS.gene69407.t1 MTR_8g062270 22.857 420 248 11 14 365 13 424 1.83e-12 69.3
MS.gene69407.t1 MTR_5g024060 33.088 136 80 4 253 388 74 198 2.03e-12 67.4
MS.gene69407.t1 MTR_8g465650 32.000 175 106 6 17 180 12 184 2.51e-12 68.6
MS.gene69407.t1 MTR_5g082930 46.377 69 35 1 19 85 17 85 2.74e-12 66.2
MS.gene69407.t1 MTR_2g101950 30.270 185 116 6 3 183 27 202 2.79e-12 68.6
MS.gene69407.t1 MTR_2g101950 30.435 184 115 6 3 182 69 243 2.87e-12 68.6
MS.gene69407.t1 MTR_2g101950 30.435 184 115 6 3 182 68 242 3.30e-12 68.6
MS.gene69407.t1 MTR_0571s0010 46.269 67 35 1 17 82 32 98 3.90e-12 63.2
MS.gene69407.t1 MTR_1g067190 34.483 145 83 5 17 158 15 150 4.20e-12 67.4
MS.gene69407.t1 MTR_8g070950 33.838 198 111 8 14 200 12 200 4.45e-12 68.2
MS.gene69407.t1 MTR_4g024720 37.500 104 58 2 2 100 4 105 5.74e-12 65.1
MS.gene69407.t1 MTR_2g007100 48.571 70 31 1 17 81 2 71 6.81e-12 61.6
MS.gene69407.t1 MTR_3g023270 32.593 135 88 2 15 149 10 141 1.39e-11 66.2
MS.gene69407.t1 MTR_8g468840 38.384 99 54 3 6 97 3 101 1.48e-11 66.6
MS.gene69407.t1 MTR_5g060570 33.088 136 83 3 17 149 17 147 1.48e-11 65.1
MS.gene69407.t1 MTR_3g094980 36.170 94 52 2 282 371 34 123 1.70e-11 63.2
MS.gene69407.t1 MTR_7g094030 32.812 192 116 6 17 200 28 214 2.20e-11 66.2
MS.gene69407.t1 MTR_5g058350 33.152 184 93 5 17 198 8 163 2.59e-11 62.8
MS.gene69407.t1 MTR_8g468810 31.818 198 113 7 17 198 25 216 2.71e-11 65.1
MS.gene69407.t1 MTR_2g007090 27.039 233 133 9 168 394 92 293 2.73e-11 64.7
MS.gene69407.t1 MTR_1g094760 31.325 166 108 3 17 178 26 189 2.87e-11 66.2
MS.gene69407.t1 MTR_6g029350 28.962 183 102 10 192 365 7 170 3.18e-11 63.5
MS.gene69407.t1 MTR_8g468810 31.818 198 113 7 17 198 25 216 3.41e-11 64.7
MS.gene69407.t1 MTR_8g468810 31.818 198 113 7 17 198 25 216 3.98e-11 64.7
MS.gene69407.t1 MTR_2g103680 56.863 51 22 0 17 67 9 59 4.20e-11 60.8
MS.gene69407.t1 MTR_4g080590 21.963 428 256 13 2 366 8 420 4.51e-11 65.1
MS.gene69407.t1 MTR_1g077420 32.948 173 94 5 15 176 2 163 5.24e-11 63.5
MS.gene69407.t1 MTR_8g468810 31.818 198 113 7 17 198 25 216 5.78e-11 64.3
MS.gene69407.t1 MTR_2g007610 31.469 143 81 4 255 394 22 150 6.44e-11 61.2
MS.gene69407.t1 MTR_5g063450 34.559 136 77 3 17 151 27 151 7.26e-11 63.9
MS.gene69407.t1 MTR_4g050930 32.593 135 84 3 17 149 29 158 8.46e-11 64.3
MS.gene69407.t1 MTR_4g050930 32.593 135 84 3 17 149 29 158 8.64e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69407.t1 AT4G26340 29.257 417 233 15 17 384 2 405 3.80e-32 127
MS.gene69407.t1 AT4G00160 29.384 422 227 18 1 367 1 406 2.65e-31 125
MS.gene69407.t1 AT3G52680 29.551 423 223 19 1 367 6 409 1.49e-28 117
MS.gene69407.t1 AT5G56370 29.762 420 239 12 17 389 2 412 3.10e-26 110
MS.gene69407.t1 AT5G56370 29.762 420 239 12 17 389 2 412 3.10e-26 110
MS.gene69407.t1 AT5G56440 27.714 433 242 11 17 390 2 422 5.38e-26 110
MS.gene69407.t1 AT5G62970 25.778 450 246 15 17 389 2 440 4.51e-23 101
MS.gene69407.t1 AT4G10400 26.536 407 249 12 17 385 2 396 7.14e-23 100
MS.gene69407.t1 AT4G10400 26.536 407 249 12 17 385 2 396 7.14e-23 100
MS.gene69407.t1 AT4G10400 26.536 407 249 12 17 385 2 396 7.14e-23 100
MS.gene69407.t1 AT4G26350 25.641 429 242 16 17 384 2 414 1.13e-21 97.4
MS.gene69407.t1 AT1G51370 26.781 407 223 15 17 367 19 406 2.55e-21 96.3
MS.gene69407.t1 AT2G26860 28.186 408 221 19 17 365 2 396 7.14e-21 94.7
MS.gene69407.t1 AT2G26860 28.186 408 221 19 17 365 2 396 7.14e-21 94.7
MS.gene69407.t1 AT3G49030 27.650 434 235 21 15 389 19 432 7.58e-21 95.1
MS.gene69407.t1 AT5G56820 27.273 396 219 15 17 365 15 388 3.10e-20 93.2
MS.gene69407.t1 AT4G13965 27.356 435 239 20 16 394 9 422 3.84e-20 92.8
MS.gene69407.t1 AT5G56560 27.143 420 240 14 13 383 1 403 4.98e-20 92.4
MS.gene69407.t1 AT2G04230 26.637 443 233 17 17 387 13 435 3.25e-19 90.1
MS.gene69407.t1 AT1G55030 25.954 393 225 16 17 360 19 394 1.66e-18 87.8
MS.gene69407.t1 AT1G55030 25.954 393 225 16 17 360 9 384 2.71e-18 87.0
MS.gene69407.t1 AT3G58930 32.663 199 114 6 17 198 2 197 2.94e-18 87.4
MS.gene69407.t1 AT3G58930 32.663 199 114 6 17 198 2 197 2.94e-18 87.4
MS.gene69407.t1 AT3G58930 32.663 199 114 6 17 198 2 197 2.94e-18 87.4
MS.gene69407.t1 AT1G51370 25.980 408 227 14 17 365 19 410 4.48e-18 86.3
MS.gene69407.t1 AT4G14103 34.171 199 115 7 17 205 8 200 1.05e-17 85.1
MS.gene69407.t1 AT4G14103 34.171 199 115 7 17 205 8 200 1.05e-17 85.1
MS.gene69407.t1 AT5G41840 32.323 198 107 5 5 180 2 194 1.28e-17 85.9
MS.gene69407.t1 AT3G26930 25.517 435 245 19 17 391 21 436 1.62e-17 85.1
MS.gene69407.t1 AT1G50980 24.870 386 224 12 13 386 27 358 2.09e-17 84.0
MS.gene69407.t1 AT3G49020 28.818 406 226 17 12 367 17 409 2.22e-17 84.7
MS.gene69407.t1 AT4G14103 35.149 202 109 9 17 205 8 200 2.42e-17 84.3
MS.gene69407.t1 AT1G51370 34.254 181 111 5 17 197 19 191 4.06e-17 82.8
MS.gene69407.t1 AT3G58940 31.651 218 114 7 17 209 2 209 4.58e-17 84.3
MS.gene69407.t1 AT3G58940 31.651 218 114 7 17 209 2 209 4.58e-17 84.3
MS.gene69407.t1 AT5G56400 27.387 398 230 12 17 365 33 420 6.52e-17 83.2
MS.gene69407.t1 AT3G52680 29.143 350 181 16 1 298 6 340 7.19e-17 82.4
MS.gene69407.t1 AT1G55660 31.731 208 132 6 4 204 40 244 1.07e-16 81.6
MS.gene69407.t1 AT1G55660 31.731 208 132 6 4 204 40 244 1.18e-16 82.4
MS.gene69407.t1 AT3G58880 36.224 196 112 4 17 202 3 195 1.19e-16 82.4
MS.gene69407.t1 AT4G14096 33.161 193 117 6 17 202 8 195 2.37e-16 81.6
MS.gene69407.t1 AT4G14096 33.161 193 117 6 17 202 8 195 2.37e-16 81.6
MS.gene69407.t1 AT5G56420 25.118 422 253 12 17 389 6 413 2.38e-16 81.3
MS.gene69407.t1 AT5G56420 25.118 422 253 12 17 389 6 413 2.38e-16 81.3
MS.gene69407.t1 AT5G56420 25.118 422 253 12 17 389 6 413 2.38e-16 81.3
MS.gene69407.t1 AT4G15060 33.862 189 118 4 14 197 23 209 2.89e-16 80.9
MS.gene69407.t1 AT1G16930 33.171 205 111 9 2 197 6 193 3.74e-16 80.9
MS.gene69407.t1 AT1G16930 33.171 205 111 9 2 197 6 193 3.74e-16 80.9
MS.gene69407.t1 AT1G16930 33.171 205 111 9 2 197 6 193 3.74e-16 80.9
MS.gene69407.t1 AT3G03040 32.323 198 121 5 17 203 2 197 4.01e-16 80.9
MS.gene69407.t1 AT1G32375 24.312 436 254 16 17 393 2 420 8.48e-16 79.7
MS.gene69407.t1 AT1G32375 24.312 436 254 16 17 393 2 420 8.48e-16 79.7
MS.gene69407.t1 AT4G00320 33.511 188 95 7 17 181 13 193 9.82e-16 79.7
MS.gene69407.t1 AT5G53840 26.471 442 241 18 17 394 18 439 1.11e-15 79.3
MS.gene69407.t1 AT4G09920 32.787 183 119 4 17 197 2 182 1.22e-15 78.2
MS.gene69407.t1 AT4G09920 32.787 183 119 4 17 197 2 182 1.22e-15 78.2
MS.gene69407.t1 AT3G49030 25.926 405 253 17 15 389 19 406 1.29e-15 79.0
MS.gene69407.t1 AT4G15060 33.158 190 120 4 17 201 172 359 1.55e-15 79.3
MS.gene69407.t1 AT3G03030 33.505 194 115 6 17 198 2 193 1.78e-15 77.8
MS.gene69407.t1 AT3G51530 25.980 408 225 16 17 367 30 417 2.14e-15 78.6
MS.gene69407.t1 AT3G03030 33.505 194 115 6 17 198 2 193 2.31e-15 78.6
MS.gene69407.t1 AT1G05080 25.806 403 238 12 17 365 13 408 2.39e-15 78.2
MS.gene69407.t1 AT3G50710 33.659 205 118 8 17 210 2 199 2.82e-15 78.2
MS.gene69407.t1 AT4G09920 32.787 183 119 4 17 197 2 182 2.97e-15 76.6
MS.gene69407.t1 AT4G09920 32.787 183 119 4 17 197 2 182 2.97e-15 76.6
MS.gene69407.t1 AT4G09920 32.787 183 119 4 17 197 2 182 2.97e-15 76.6
MS.gene69407.t1 AT1G58310 32.661 248 132 10 17 237 8 247 3.94e-15 77.8
MS.gene69407.t1 AT5G41830 32.240 183 104 5 17 181 13 193 4.14e-15 77.8
MS.gene69407.t1 AT5G56370 29.231 325 182 10 17 302 2 317 4.43e-15 76.3
MS.gene69407.t1 AT4G00315 30.769 195 125 6 17 204 2 193 4.65e-15 77.4
MS.gene69407.t1 AT5G18780 30.851 188 120 5 17 201 11 191 9.74e-15 75.9
MS.gene69407.t1 AT5G18780 30.851 188 120 5 17 201 11 191 9.74e-15 75.9
MS.gene69407.t1 AT5G38590 32.609 184 120 4 17 199 2 182 1.40e-14 75.9
MS.gene69407.t1 AT5G38590 32.609 184 120 4 17 199 2 182 1.53e-14 74.3
MS.gene69407.t1 AT5G18780 30.851 188 120 5 17 201 11 191 1.74e-14 75.5
MS.gene69407.t1 AT5G18780 30.851 188 120 5 17 201 11 191 1.74e-14 75.5
MS.gene69407.t1 AT5G22700 24.105 419 252 17 7 386 33 424 1.97e-14 75.5
MS.gene69407.t1 AT5G56380 34.375 192 110 6 17 197 2 188 2.97e-14 75.1
MS.gene69407.t1 AT5G56380 34.375 192 110 6 17 197 2 188 2.97e-14 75.1
MS.gene69407.t1 AT5G56690 25.183 409 231 18 19 365 4 399 3.86e-14 74.3
MS.gene69407.t1 AT3G49150 29.016 193 122 4 15 197 14 201 4.58e-14 74.3
MS.gene69407.t1 AT3G59200 33.505 194 109 8 17 197 7 193 4.83e-14 73.9
MS.gene69407.t1 AT3G59200 33.505 194 109 8 17 197 7 193 5.81e-14 74.3
MS.gene69407.t1 AT5G22700 30.366 191 119 5 17 202 6 187 6.55e-14 73.9
MS.gene69407.t1 AT5G22700 30.366 191 119 5 17 202 6 187 6.55e-14 73.9
MS.gene69407.t1 AT5G22700 30.366 191 119 5 17 202 6 187 6.55e-14 73.9
MS.gene69407.t1 AT5G22700 30.366 191 119 5 17 202 6 187 6.55e-14 73.9
MS.gene69407.t1 AT5G53635 31.892 185 115 4 19 198 2 180 8.07e-14 73.6
MS.gene69407.t1 AT5G22700 29.353 201 128 5 7 202 33 224 8.13e-14 73.6
MS.gene69407.t1 AT1G69630 36.301 146 86 5 14 154 15 158 8.37e-14 73.6
MS.gene69407.t1 AT5G53640 29.730 185 116 6 17 197 22 196 8.54e-14 70.9
MS.gene69407.t1 AT3G58860 34.184 196 111 7 14 197 4 193 9.00e-14 73.6
MS.gene69407.t1 AT5G38392 32.828 198 111 8 17 197 2 194 1.09e-13 70.5
MS.gene69407.t1 AT3G56780 33.898 177 97 5 16 187 6 167 1.17e-13 73.2
MS.gene69407.t1 AT3G56780 33.898 177 97 5 16 187 6 167 1.24e-13 73.2
MS.gene69407.t1 AT1G19070 45.783 83 42 2 17 97 2 83 1.36e-13 66.6
MS.gene69407.t1 AT2G26030 31.019 216 120 8 16 210 3 210 1.40e-13 72.8
MS.gene69407.t1 AT2G26030 31.019 216 120 8 16 210 3 210 1.49e-13 72.8
MS.gene69407.t1 AT2G26030 31.019 216 120 8 16 210 3 210 1.49e-13 72.8
MS.gene69407.t1 AT3G59150 30.102 196 123 7 17 201 13 205 1.90e-13 72.4
MS.gene69407.t1 AT5G56810 25.000 452 232 17 17 394 15 433 2.12e-13 72.4
MS.gene69407.t1 AT4G13960 33.673 196 104 7 17 197 2 186 2.73e-13 72.0
MS.gene69407.t1 AT4G13960 33.673 196 104 7 17 197 2 186 2.73e-13 72.0
MS.gene69407.t1 AT1G78750 25.054 459 248 20 15 394 16 457 3.80e-13 71.6
MS.gene69407.t1 AT1G78750 25.054 459 248 20 15 394 16 457 3.80e-13 71.6
MS.gene69407.t1 AT5G56410 26.914 431 219 21 17 369 2 414 4.14e-13 71.6
MS.gene69407.t1 AT3G56780 33.898 177 97 5 16 187 6 167 4.27e-13 71.2
MS.gene69407.t1 AT5G56560 34.197 193 120 6 13 203 1 188 6.28e-13 71.2
MS.gene69407.t1 AT1G78760 29.688 192 126 6 17 204 16 202 7.97e-13 70.5
MS.gene69407.t1 AT3G26920 27.636 275 174 12 132 393 37 299 1.12e-12 68.9
MS.gene69407.t1 AT3G58980 36.765 136 79 4 17 149 2 133 1.25e-12 70.5
MS.gene69407.t1 AT3G26922 29.648 199 128 5 17 210 14 205 1.51e-12 68.6
MS.gene69407.t1 AT3G26922 29.648 199 128 5 17 210 14 205 1.51e-12 68.6
MS.gene69407.t1 AT5G44850 27.055 292 176 11 105 383 49 316 1.66e-12 68.9
MS.gene69407.t1 AT4G22280 25.220 341 186 11 17 300 2 330 2.44e-12 68.9
MS.gene69407.t1 AT3G49040 29.703 202 123 8 12 203 12 204 3.25e-12 67.8
MS.gene69407.t1 AT5G22660 33.505 194 117 6 8 197 4 189 3.65e-12 67.4
MS.gene69407.t1 AT4G22280 25.074 339 189 10 17 300 2 330 3.69e-12 67.8
MS.gene69407.t1 AT5G25850 31.841 201 123 5 4 200 7 197 3.93e-12 68.6
MS.gene69407.t1 AT5G22660 33.679 193 118 6 8 197 4 189 3.98e-12 68.6
MS.gene69407.t1 AT5G18770 23.373 415 242 12 17 365 24 428 5.13e-12 68.2
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 5.26e-12 67.0
MS.gene69407.t1 AT3G59190 29.310 174 108 5 17 179 12 181 5.81e-12 67.4
MS.gene69407.t1 AT5G22730 30.435 207 117 8 4 197 15 207 6.47e-12 67.8
MS.gene69407.t1 AT5G22730 30.435 207 117 8 4 197 15 207 6.47e-12 67.8
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 6.52e-12 67.8
MS.gene69407.t1 AT3G59190 29.310 174 108 5 17 179 12 181 6.73e-12 67.8
MS.gene69407.t1 AT3G59250 28.342 187 104 4 17 202 7 164 9.23e-12 67.0
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.82e-12 66.6
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.82e-12 66.6
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.94e-12 67.0
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.94e-12 67.0
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.94e-12 67.0
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 12 206 9.94e-12 67.0
MS.gene69407.t1 AT5G18770 29.843 191 119 6 17 198 24 208 1.02e-11 66.6
MS.gene69407.t1 AT5G22730 30.435 207 117 8 4 197 15 207 1.05e-11 66.6
MS.gene69407.t1 AT5G22670 30.918 207 126 8 17 214 11 209 1.19e-11 67.0
MS.gene69407.t1 AT1G06630 31.683 202 114 8 17 201 21 215 1.36e-11 66.6
MS.gene69407.t1 AT3G12840 35.417 96 56 3 6 99 4 95 1.67e-11 63.2
MS.gene69407.t1 AT1G52650 31.795 195 110 6 17 197 2 187 1.77e-11 66.2
MS.gene69407.t1 AT3G26930 23.961 409 232 18 43 391 2 391 2.13e-11 65.9
MS.gene69407.t1 AT5G38390 32.642 193 109 8 17 202 2 180 4.25e-11 65.1
MS.gene69407.t1 AT5G38590 30.405 148 100 3 17 163 2 147 4.83e-11 63.9
MS.gene69407.t1 AT5G44940 26.161 409 242 18 13 394 1 376 5.04e-11 64.7
MS.gene69407.t1 AT2G42720 33.508 191 115 6 17 197 2 190 5.87e-11 64.7
MS.gene69407.t1 AT5G41630 33.714 175 94 6 17 173 12 182 6.05e-11 64.7
MS.gene69407.t1 AT1G32020 52.174 46 22 0 15 60 2 47 6.62e-11 61.2
MS.gene69407.t1 AT1G80470 28.571 189 127 6 13 197 11 195 7.24e-11 64.3
MS.gene69407.t1 AT3G59210 33.171 205 105 8 13 197 1 193 8.04e-11 64.3
MS.gene69407.t1 AT3G59210 33.171 205 105 8 13 197 1 193 8.04e-11 64.3
MS.gene69407.t1 AT3G59210 33.171 205 105 8 13 197 1 193 8.04e-11 64.3
MS.gene69407.t1 AT3G59210 33.171 205 105 8 13 197 1 193 8.04e-11 64.3
MS.gene69407.t1 AT3G59210 33.171 205 105 8 13 197 1 193 8.04e-11 64.3
MS.gene69407.t1 AT3G52690 28.523 298 150 14 143 389 4 289 8.89e-11 63.2

Find 111 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTGGCTTTCACCAAAT+TGG 0.191750 3.3:-93159322 None:intergenic
TTCCTCTCTTCCTGCTTTCC+AGG 0.201152 3.3:+93159361 MS.gene69407:CDS
GTATTTCCCGTTTAAATCTA+TGG 0.201953 3.3:-93159957 None:intergenic
AATCGATGATTGCTGCTTCT+TGG 0.242054 3.3:-93158668 None:intergenic
GATCAAATGCTTGCCCAATT+TGG 0.243250 3.3:+93159308 MS.gene69407:CDS
TGTTTACAGGAGATAGAAAA+TGG 0.244415 3.3:+93159746 MS.gene69407:intron
AGGCATTCTGGAACAATCTT+TGG 0.254606 3.3:-93159809 None:intergenic
TGATTGCTGCTTCTTGGATT+TGG 0.271445 3.3:-93158662 None:intergenic
AGCTGAGATGAAAGGCATTC+TGG 0.273251 3.3:-93159821 None:intergenic
CGATCTGCAGCCAATTCTTA+TGG 0.286417 3.3:+93160960 MS.gene69407:CDS
CCAGATCTTAATTCTTCTAT+TGG 0.289452 3.3:+93160903 MS.gene69407:CDS
AGAAACTATCTCTGTGTCTA+AGG 0.297533 3.3:+93159990 MS.gene69407:CDS
GAAATAGTATTATTTATTAG+AGG 0.311510 3.3:-93159132 None:intergenic
GCTTGTGGCGACGGTGTCTT+TGG 0.336244 3.3:-93158764 None:intergenic
AGCTTGGCTTTCACCAAATT+GGG 0.336723 3.3:-93159321 None:intergenic
AGCATCCACATCCACTTCTT+AGG 0.363863 3.3:-93159579 None:intergenic
GAAATGATGATGAGGTCATT+TGG 0.386282 3.3:+93159780 MS.gene69407:CDS
TTGCACATTGCCAGGTCTGC+CGG 0.387704 3.3:-93161036 None:intergenic
TGCACATTGCCAGGTCTGCC+GGG 0.388581 3.3:-93161035 None:intergenic
TGTTTGCAATTCCTCTAGAA+TGG 0.393795 3.3:-93159232 None:intergenic
CCACAATGGTTTCCACCTCT+TGG 0.395423 3.3:-93158794 None:intergenic
TTCTCTAACTTAGAGCATAA+AGG 0.395447 3.3:+93159552 MS.gene69407:CDS
ACTAGCAAAACCATAAGAAT+TGG 0.396455 3.3:-93160970 None:intergenic
GAAAGCAGGAAGAGAGGAAT+AGG 0.398442 3.3:-93159357 None:intergenic
GGCATTCTGGAACAATCTTT+GGG 0.400800 3.3:-93159808 None:intergenic
CCCGTTTAAATCTATGGAAC+GGG 0.402193 3.3:-93159951 None:intergenic
GAATGTCTCCGAGGATTGTT+AGG 0.403593 3.3:-93159110 None:intergenic
ATGATAAGATGTTGAAGCTT+TGG 0.406878 3.3:-93159621 None:intergenic
GCCCGTTCCATAGATTTAAA+CGG 0.412276 3.3:+93159950 MS.gene69407:CDS
GGTGTCTTTGGTTGGGAGAA+AGG 0.415987 3.3:-93158752 None:intergenic
ACTTGGCATTGCACATTGCC+AGG 0.416241 3.3:-93161044 None:intergenic
GATAAGTTGGGTTATTTCGT+TGG 0.423127 3.3:-93158965 None:intergenic
CCCGTTCCATAGATTTAAAC+GGG 0.425371 3.3:+93159951 MS.gene69407:CDS
TCCTCTCTTCCTGCTTTCCA+GGG 0.425607 3.3:+93159362 MS.gene69407:CDS
GCAGCAATCATCGATTCTAA+TGG 0.426113 3.3:+93158675 MS.gene69407:CDS
TAAACAACATGTTAAGTTCA+AGG 0.429505 3.3:-93159017 None:intergenic
CGACAGGGTTAGCTCCCTTC+CGG 0.430397 3.3:+93158705 MS.gene69407:CDS
TTTCGTTCATGAAGGCTGTT+TGG 0.434635 3.3:-93158846 None:intergenic
AATTCTTCTATTGGTAACTC+TGG 0.437625 3.3:+93160912 MS.gene69407:CDS
AGTAAAGGTATTTCCTTTGA+GGG 0.437832 3.3:+93159260 MS.gene69407:CDS
AAATGATGATGAGGTCATTT+GGG 0.443371 3.3:+93159781 MS.gene69407:CDS
GTTTGCAATTCCTCTAGAAT+GGG 0.446597 3.3:-93159231 None:intergenic
AAGTAAAGGTATTTCCTTTG+AGG 0.447140 3.3:+93159259 MS.gene69407:CDS
TGCTTGTTTAAGAATTATAG+AGG 0.448930 3.3:+93159851 MS.gene69407:CDS
GTGGCGACGGTGTCTTTGGT+TGG 0.449866 3.3:-93158760 None:intergenic
GACTCCGTGCCCTGGAAAGC+AGG 0.452777 3.3:-93159371 None:intergenic
ATAGAAAATGGGACAGAGAA+TGG 0.455331 3.3:+93159758 MS.gene69407:CDS
TGGCGACGGTGTCTTTGGTT+GGG 0.461534 3.3:-93158759 None:intergenic
AGTAGAGGCCCCGGCAGACC+TGG 0.470992 3.3:+93161026 MS.gene69407:CDS
ATAAGTTGGGTTATTTCGTT+GGG 0.477353 3.3:-93158964 None:intergenic
TCTTCCTGCTTTCCAGGGCA+CGG 0.477475 3.3:+93159367 MS.gene69407:CDS
AAACGGGGACTTGGACATAG+TGG 0.479850 3.3:-93159503 None:intergenic
GAGATAGTTTCTGTAACATC+TGG 0.482607 3.3:-93159979 None:intergenic
GTTGGGTTATTTCGTTGGGT+TGG 0.483623 3.3:-93158960 None:intergenic
GTATTGCTGCAATGATAAGT+TGG 0.484672 3.3:-93158978 None:intergenic
CCAATAGAAGAATTAAGATC+TGG 0.486543 3.3:-93160903 None:intergenic
GCTAGTGGTTCACGAGGTAG+TGG 0.492433 3.3:+93160987 MS.gene69407:CDS
AGGTTTGTTATCAGAAAGCT+TGG 0.501069 3.3:-93159337 None:intergenic
TCCCGTTTAAATCTATGGAA+CGG 0.501538 3.3:-93159952 None:intergenic
CTTGTCCTTTCCCATTCTAG+AGG 0.504356 3.3:+93159221 MS.gene69407:CDS
GAAACTATCTCTGTGTCTAA+GGG 0.505383 3.3:+93159991 MS.gene69407:CDS
AAACAACATGTTAAGTTCAA+GGG 0.508835 3.3:-93159016 None:intergenic
GGTATGCAGCACAACATTTG+AGG 0.517123 3.3:-93158939 None:intergenic
TTGAGGCGGAATGATCGTAT+TGG 0.517780 3.3:-93158922 None:intergenic
TATTGCTGCAATGATAAGTT+GGG 0.520306 3.3:-93158977 None:intergenic
GGAGAGGATGCTTGTGGCGA+CGG 0.536762 3.3:-93158773 None:intergenic
TATACTGAGACTCCGTGCCC+TGG 0.543411 3.3:-93159379 None:intergenic
AAGAGTGGTTTCGTTCATGA+AGG 0.543592 3.3:-93158854 None:intergenic
ATTGCAAACAAATAAAGTAA+AGG 0.544230 3.3:+93159245 MS.gene69407:CDS
ATGTGACAGATAATTGAGTC+CGG 0.546177 3.3:-93158724 None:intergenic
AGAATTAAGATCTGGAGGTA+TGG 0.546867 3.3:-93160895 None:intergenic
GGAGGCCACAGTAGAGGCCC+CGG 0.547836 3.3:+93161017 MS.gene69407:CDS
CGTCATACAAGTGAATATGT+TGG 0.551512 3.3:-93159064 None:intergenic
CAATTCCTCTAGAATGGGAA+AGG 0.553185 3.3:-93159226 None:intergenic
ACTACTCAAAACTCTCCACT+TGG 0.555992 3.3:+93159155 MS.gene69407:CDS
GCAGATCGAAGAGTTTCAAA+TGG 0.558674 3.3:-93160945 None:intergenic
TTAAAACACCTAACAATCCT+CGG 0.559134 3.3:+93159102 MS.gene69407:CDS
GTTTACAGGAGATAGAAAAT+GGG 0.562565 3.3:+93159747 MS.gene69407:intron
GGACGTGGAGGCCACAGTAG+AGG 0.562968 3.3:+93161011 MS.gene69407:CDS
TTAGGAACAAACTCCCTCAA+AGG 0.565559 3.3:-93159273 None:intergenic
TCACGAGGTAGTGGTGGACG+TGG 0.566537 3.3:+93160996 MS.gene69407:CDS
GTCTGCCGGGGCCTCTACTG+TGG 0.567529 3.3:-93161022 None:intergenic
GACAGATAATTGAGTCCGGA+AGG 0.575658 3.3:-93158720 None:intergenic
ACGGAGTCTCAGTATAAAGA+TGG 0.577095 3.3:+93159386 MS.gene69407:CDS
GCCCTGGAAAGCAGGAAGAG+AGG 0.581330 3.3:-93159363 None:intergenic
CTAACTTAGAGCATAAAGGT+TGG 0.585546 3.3:+93159556 MS.gene69407:CDS
CCAAGAGGTGGAAACCATTG+TGG 0.587163 3.3:+93158794 MS.gene69407:CDS
TCGAAGAGTTTCAAATGGCA+AGG 0.595019 3.3:-93160940 None:intergenic
GCACATTGCCAGGTCTGCCG+GGG 0.597996 3.3:-93161034 None:intergenic
AGTGGTTCACGAGGTAGTGG+TGG 0.605904 3.3:+93160990 MS.gene69407:CDS
CAAGCATCCTCTCCAAGAGG+TGG 0.606670 3.3:+93158782 MS.gene69407:CDS
ATGGTTTCCACCTCTTGGAG+AGG 0.607617 3.3:-93158789 None:intergenic
GTTGGCCTAAGAAGTGGATG+TGG 0.611595 3.3:+93159574 MS.gene69407:CDS
CCTCTTGGAGAGGATGCTTG+TGG 0.613625 3.3:-93158779 None:intergenic
AACTATCTCTGTGTCTAAGG+GGG 0.614313 3.3:+93159993 MS.gene69407:CDS
GTGAGGACTGAGAGCCACAA+TGG 0.614758 3.3:-93158808 None:intergenic
AAACTATCTCTGTGTCTAAG+GGG 0.615774 3.3:+93159992 MS.gene69407:CDS
ATAAAGGTTGGCCTAAGAAG+TGG 0.617733 3.3:+93159568 MS.gene69407:CDS
TGAAATTAACTCTATCCAAG+TGG 0.619401 3.3:-93159170 None:intergenic
AACGGGGACTTGGACATAGT+GGG 0.621043 3.3:-93159502 None:intergenic
AGAGAATGGAAATGATGATG+AGG 0.624314 3.3:+93159772 MS.gene69407:CDS
ATAGAAGAATTAAGATCTGG+AGG 0.626500 3.3:-93160900 None:intergenic
GGTCGATGAAATCGAGAGTG+AGG 0.634878 3.3:-93158825 None:intergenic
TGATGATGAGGTCATTTGGG+AGG 0.652261 3.3:+93159784 MS.gene69407:CDS
GTAAACATGACTGCAAAGAG+TGG 0.653451 3.3:-93158869 None:intergenic
ACAGATAATTGAGTCCGGAA+GGG 0.662905 3.3:-93158719 None:intergenic
CGAGGTAGTGGTGGACGTGG+AGG 0.667383 3.3:+93160999 MS.gene69407:CDS
TCAACATCTTATCATTCACG+AGG 0.669422 3.3:+93159629 MS.gene69407:CDS
ATGCAGCACAACATTTGAGG+CGG 0.670351 3.3:-93158936 None:intergenic
CCACAAGCATCCTCTCCAAG+AGG 0.690371 3.3:+93158779 MS.gene69407:CDS
TTATTAGAGGAATGTCTCCG+AGG 0.694855 3.3:-93159119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATAGTATTATTTATTAG+AGG - chr3.3:93159135-93159154 None:intergenic 15.0%
!! TGACTAAAATAAATAACAAT+TGG - chr3.3:93160240-93160259 None:intergenic 15.0%
!!! ATACATTTTCAATTATGTAT+TGG + chr3.3:93160157-93160176 MS.gene69407:intron 15.0%
!! AGTTAAACAAAATAGATATC+AGG - chr3.3:93159679-93159698 None:intergenic 20.0%
!! ATAACATAGAGGAAAAAATA+AGG - chr3.3:93160137-93160156 None:intergenic 20.0%
!! ATATATAATAAACAACTGCT+AGG - chr3.3:93160310-93160329 None:intergenic 20.0%
!! ATTGCAAACAAATAAAGTAA+AGG + chr3.3:93159245-93159264 MS.gene69407:CDS 20.0%
!! GAAATTTACTTATTGTTTAC+AGG + chr3.3:93159733-93159752 MS.gene69407:intron 20.0%
!! TGAAAATGTATATAACATAG+AGG - chr3.3:93160148-93160167 None:intergenic 20.0%
!! TTGAGTTAGATTGTAAAAAA+CGG - chr3.3:93159523-93159542 None:intergenic 20.0%
!!! AAATAACAATTGGTAACAAA+AGG - chr3.3:93160230-93160249 None:intergenic 20.0%
!!! CATATCTTAACTTTTGTTTT+TGG + chr3.3:93159708-93159727 MS.gene69407:intron 20.0%
!!! GTTATTTATTTTAGTCATCT+CGG + chr3.3:93160243-93160262 MS.gene69407:intron 20.0%
!!! TACTTTTTTTTGGGTATTTT+GGG + chr3.3:93160404-93160423 MS.gene69407:intron 20.0%
!!! TTTTCTAGCAGTTTTTATTA+AGG + chr3.3:93160275-93160294 MS.gene69407:intron 20.0%
!!! TTTTTACAATCTAACTCAAA+TGG + chr3.3:93159524-93159543 MS.gene69407:CDS 20.0%
! AAACAACATGTTAAGTTCAA+GGG - chr3.3:93159019-93159038 None:intergenic 25.0%
! ACAAAAGTTAAGATATGTAG+AGG - chr3.3:93159705-93159724 None:intergenic 25.0%
! ATTTCTATGAAATCTTCAAC+TGG - chr3.3:93160725-93160744 None:intergenic 25.0%
! TAAACAACATGTTAAGTTCA+AGG - chr3.3:93159020-93159039 None:intergenic 25.0%
! TGAGTTAGATTGTAAAAAAC+GGG - chr3.3:93159522-93159541 None:intergenic 25.0%
! TGCTTGTTTAAGAATTATAG+AGG + chr3.3:93159851-93159870 MS.gene69407:CDS 25.0%
!! TATTGTCTTTTAAACACCAT+CGG - chr3.3:93160108-93160127 None:intergenic 25.0%
!!! ATCTTAACTTTTGTTTTTGG+TGG + chr3.3:93159711-93159730 MS.gene69407:intron 25.0%
!!! GTACTTTTTTTTGGGTATTT+TGG + chr3.3:93160403-93160422 MS.gene69407:intron 25.0%
AAGCTTGTATTTGAATGATG+AGG + chr3.3:93160019-93160038 MS.gene69407:intron 30.0%
AATAATCGTTCATAGGATGT+GGG - chr3.3:93160677-93160696 None:intergenic 30.0%
ACTAGCAAAACCATAAGAAT+TGG - chr3.3:93160973-93160992 None:intergenic 30.0%
AGCTTGTATTTGAATGATGA+GGG + chr3.3:93160020-93160039 MS.gene69407:intron 30.0%
ATAGAAGAATTAAGATCTGG+AGG - chr3.3:93160903-93160922 None:intergenic 30.0%
ATGATAAGATGTTGAAGCTT+TGG - chr3.3:93159624-93159643 None:intergenic 30.0%
CCAATAGAAGAATTAAGATC+TGG - chr3.3:93160906-93160925 None:intergenic 30.0%
CCAGATCTTAATTCTTCTAT+TGG + chr3.3:93160903-93160922 MS.gene69407:CDS 30.0%
GAAGACTAATAATCGTTCAT+AGG - chr3.3:93160684-93160703 None:intergenic 30.0%
GAGTTAGATTGTAAAAAACG+GGG - chr3.3:93159521-93159540 None:intergenic 30.0%
GTATTTCCCGTTTAAATCTA+TGG - chr3.3:93159960-93159979 None:intergenic 30.0%
GTTTACAGGAGATAGAAAAT+GGG + chr3.3:93159747-93159766 MS.gene69407:intron 30.0%
TAATAATCGTTCATAGGATG+TGG - chr3.3:93160678-93160697 None:intergenic 30.0%
TATTGCTGCAATGATAAGTT+GGG - chr3.3:93158980-93158999 None:intergenic 30.0%
TGAAATTAACTCTATCCAAG+TGG - chr3.3:93159173-93159192 None:intergenic 30.0%
TGTTTACAGGAGATAGAAAA+TGG + chr3.3:93159746-93159765 MS.gene69407:intron 30.0%
TTAAAACACCTAACAATCCT+CGG + chr3.3:93159102-93159121 MS.gene69407:CDS 30.0%
TTCTCTAACTTAGAGCATAA+AGG + chr3.3:93159552-93159571 MS.gene69407:CDS 30.0%
! AAATGATGATGAGGTCATTT+GGG + chr3.3:93159781-93159800 MS.gene69407:CDS 30.0%
! AATTCTTCTATTGGTAACTC+TGG + chr3.3:93160912-93160931 MS.gene69407:CDS 30.0%
! ACAATTGGTAACAAAAGGAA+AGG - chr3.3:93160225-93160244 None:intergenic 30.0%
! ATAAGTTGGGTTATTTCGTT+GGG - chr3.3:93158967-93158986 None:intergenic 30.0%
!! AAGTAAAGGTATTTCCTTTG+AGG + chr3.3:93159259-93159278 MS.gene69407:CDS 30.0%
!! AATTCTTATGGTTTTGCTAG+TGG + chr3.3:93160972-93160991 MS.gene69407:CDS 30.0%
!! AGTAAAGGTATTTCCTTTGA+GGG + chr3.3:93159260-93159279 MS.gene69407:CDS 30.0%
!! TTGAAGTTTCTTCTGAAACT+TGG - chr3.3:93160821-93160840 None:intergenic 30.0%
!!! TCACTGGTGTACTTTTTTTT+GGG + chr3.3:93160395-93160414 MS.gene69407:intron 30.0%
AAACTATCTCTGTGTCTAAG+GGG + chr3.3:93159992-93160011 MS.gene69407:CDS 35.0%
AAAGGAAAGGAAAAGTTGAG+AGG - chr3.3:93160212-93160231 None:intergenic 35.0%
AAAGTTGAGAGGAACTTGAA+TGG - chr3.3:93160201-93160220 None:intergenic 35.0%
AGAAACTATCTCTGTGTCTA+AGG + chr3.3:93159990-93160009 MS.gene69407:CDS 35.0%
AGAATTAAGATCTGGAGGTA+TGG - chr3.3:93160898-93160917 None:intergenic 35.0%
AGCGAGACTTCTTAATTCTA+TGG - chr3.3:93160481-93160500 None:intergenic 35.0%
ATAGAAAATGGGACAGAGAA+TGG + chr3.3:93159758-93159777 MS.gene69407:CDS 35.0%
ATGTGACAGATAATTGAGTC+CGG - chr3.3:93158727-93158746 None:intergenic 35.0%
CCAGTGACAAACTTAAAAAC+AGG - chr3.3:93160382-93160401 None:intergenic 35.0%
CGTCATACAAGTGAATATGT+TGG - chr3.3:93159067-93159086 None:intergenic 35.0%
CTAACTTAGAGCATAAAGGT+TGG + chr3.3:93159556-93159575 MS.gene69407:CDS 35.0%
CTTTGTAATTCATGCAGACA+TGG + chr3.3:93159478-93159497 MS.gene69407:intron 35.0%
GAAACTATCTCTGTGTCTAA+GGG + chr3.3:93159991-93160010 MS.gene69407:CDS 35.0%
GAGATAGTTTCTGTAACATC+TGG - chr3.3:93159982-93160001 None:intergenic 35.0%
GATTCAGCTTAAAGAAGAAG+AGG + chr3.3:93160765-93160784 MS.gene69407:intron 35.0%
GCTTGTATTTGAATGATGAG+GGG + chr3.3:93160021-93160040 MS.gene69407:intron 35.0%
GTATTGCTGCAATGATAAGT+TGG - chr3.3:93158981-93159000 None:intergenic 35.0%
GTCTGCATGAATTACAAAGA+CGG - chr3.3:93159477-93159496 None:intergenic 35.0%
TCAACATCTTATCATTCACG+AGG + chr3.3:93159629-93159648 MS.gene69407:CDS 35.0%
TCCCGTTTAAATCTATGGAA+CGG - chr3.3:93159955-93159974 None:intergenic 35.0%
TCTAATGGAAAAATGCGACA+GGG + chr3.3:93158690-93158709 MS.gene69407:CDS 35.0%
TCTGCATGAATTACAAAGAC+GGG - chr3.3:93159476-93159495 None:intergenic 35.0%
TTCTAATGGAAAAATGCGAC+AGG + chr3.3:93158689-93158708 MS.gene69407:CDS 35.0%
TTCTCTCAAAAACGAGAAGT+AGG - chr3.3:93160567-93160586 None:intergenic 35.0%
! AGAGAATGGAAATGATGATG+AGG + chr3.3:93159772-93159791 MS.gene69407:CDS 35.0%
! GAAATGATGATGAGGTCATT+TGG + chr3.3:93159780-93159799 MS.gene69407:CDS 35.0%
! GATAAGTTGGGTTATTTCGT+TGG - chr3.3:93158968-93158987 None:intergenic 35.0%
! TGTTTGCAATTCCTCTAGAA+TGG - chr3.3:93159235-93159254 None:intergenic 35.0%
!! AGGTTTGTTATCAGAAAGCT+TGG - chr3.3:93159340-93159359 None:intergenic 35.0%
!! GTTTGCAATTCCTCTAGAAT+GGG - chr3.3:93159234-93159253 None:intergenic 35.0%
!!! AAGTTTTGAGCTGAGATGAA+AGG - chr3.3:93159832-93159851 None:intergenic 35.0%
!!! CCTGTTTTTAAGTTTGTCAC+TGG + chr3.3:93160379-93160398 MS.gene69407:intron 35.0%
!!! GTCACTGGTGTACTTTTTTT+TGG + chr3.3:93160394-93160413 MS.gene69407:intron 35.0%
!!! TTGATCTTGTCTGCTGTTTT+AGG - chr3.3:93159294-93159313 None:intergenic 35.0%
!!! TTTTTTGGGTATTTTGGGCA+GGG + chr3.3:93160409-93160428 MS.gene69407:intron 35.0%
!!! TTTTTTTGGGTATTTTGGGC+AGG + chr3.3:93160408-93160427 MS.gene69407:intron 35.0%
AACTATCTCTGTGTCTAAGG+GGG + chr3.3:93159993-93160012 MS.gene69407:CDS 40.0%
AAGAGTGGTTTCGTTCATGA+AGG - chr3.3:93158857-93158876 None:intergenic 40.0%
ACAGATAATTGAGTCCGGAA+GGG - chr3.3:93158722-93158741 None:intergenic 40.0%
ACGGAGTCTCAGTATAAAGA+TGG + chr3.3:93159386-93159405 MS.gene69407:CDS 40.0%
ACTACTCAAAACTCTCCACT+TGG + chr3.3:93159155-93159174 MS.gene69407:CDS 40.0%
AGCATAGCTACATGGATAGA+AGG + chr3.3:93160340-93160359 MS.gene69407:intron 40.0%
CCCGTTCCATAGATTTAAAC+GGG + chr3.3:93159951-93159970 MS.gene69407:CDS 40.0%
CCCGTTTAAATCTATGGAAC+GGG - chr3.3:93159954-93159973 None:intergenic 40.0%
GATCAAATGCTTGCCCAATT+TGG + chr3.3:93159308-93159327 MS.gene69407:CDS 40.0%
GATTGTAAAAAACGGGGACT+TGG - chr3.3:93159515-93159534 None:intergenic 40.0%
GCAGATCGAAGAGTTTCAAA+TGG - chr3.3:93160948-93160967 None:intergenic 40.0%
GCATAGCTACATGGATAGAA+GGG + chr3.3:93160341-93160360 MS.gene69407:intron 40.0%
GCCCGTTCCATAGATTTAAA+CGG + chr3.3:93159950-93159969 MS.gene69407:CDS 40.0%
GTAAACATGACTGCAAAGAG+TGG - chr3.3:93158872-93158891 None:intergenic 40.0%
TCGAAGAGTTTCAAATGGCA+AGG - chr3.3:93160943-93160962 None:intergenic 40.0%
TGATACGAAGCATAGCTACA+TGG + chr3.3:93160332-93160351 MS.gene69407:intron 40.0%
TGTATTTGAATGATGAGGGG+TGG + chr3.3:93160024-93160043 MS.gene69407:intron 40.0%
TTAGGAACAAACTCCCTCAA+AGG - chr3.3:93159276-93159295 None:intergenic 40.0%
TTATTAGAGGAATGTCTCCG+AGG - chr3.3:93159122-93159141 None:intergenic 40.0%
TTTCGTTCATGAAGGCTGTT+TGG - chr3.3:93158849-93158868 None:intergenic 40.0%
! AAGCTTGGCTTTCACCAAAT+TGG - chr3.3:93159325-93159344 None:intergenic 40.0%
! AATCGATGATTGCTGCTTCT+TGG - chr3.3:93158671-93158690 None:intergenic 40.0%
! AGCTTGGCTTTCACCAAATT+GGG - chr3.3:93159324-93159343 None:intergenic 40.0%
! ATAGGATGTGGGCATTTTGA+AGG - chr3.3:93160666-93160685 None:intergenic 40.0%
! TGATTGCTGCTTCTTGGATT+TGG - chr3.3:93158665-93158684 None:intergenic 40.0%
!! AGGCATTCTGGAACAATCTT+TGG - chr3.3:93159812-93159831 None:intergenic 40.0%
!! ATAAAGGTTGGCCTAAGAAG+TGG + chr3.3:93159568-93159587 MS.gene69407:CDS 40.0%
!! CAATTCCTCTAGAATGGGAA+AGG - chr3.3:93159229-93159248 None:intergenic 40.0%
!! GCAGCAATCATCGATTCTAA+TGG + chr3.3:93158675-93158694 MS.gene69407:CDS 40.0%
!! GGCATTCTGGAACAATCTTT+GGG - chr3.3:93159811-93159830 None:intergenic 40.0%
AATTCTATGGTTCTCAGCCG+TGG - chr3.3:93160468-93160487 None:intergenic 45.0%
AGCATCCACATCCACTTCTT+AGG - chr3.3:93159582-93159601 None:intergenic 45.0%
ATGCAGCACAACATTTGAGG+CGG - chr3.3:93158939-93158958 None:intergenic 45.0%
CATCAGTCAAAATGCCCATG+TGG + chr3.3:93160615-93160634 MS.gene69407:intron 45.0%
CGATCTGCAGCCAATTCTTA+TGG + chr3.3:93160960-93160979 MS.gene69407:CDS 45.0%
CTTGTCCTTTCCCATTCTAG+AGG + chr3.3:93159221-93159240 MS.gene69407:CDS 45.0%
GAAAGCAGGAAGAGAGGAAT+AGG - chr3.3:93159360-93159379 None:intergenic 45.0%
GAATGTCTCCGAGGATTGTT+AGG - chr3.3:93159113-93159132 None:intergenic 45.0%
GACAGATAATTGAGTCCGGA+AGG - chr3.3:93158723-93158742 None:intergenic 45.0%
GGTATGCAGCACAACATTTG+AGG - chr3.3:93158942-93158961 None:intergenic 45.0%
TCAAAATGCCCATGTGGTCT+TGG + chr3.3:93160621-93160640 MS.gene69407:intron 45.0%
TCAACCTCACTAATGCTGAC+AGG + chr3.3:93160864-93160883 MS.gene69407:intron 45.0%
TTGAGGCGGAATGATCGTAT+TGG - chr3.3:93158925-93158944 None:intergenic 45.0%
TTTGAAGGACAGTCACCACA+AGG - chr3.3:93160651-93160670 None:intergenic 45.0%
! GTTGGGTTATTTCGTTGGGT+TGG - chr3.3:93158963-93158982 None:intergenic 45.0%
! TGATGATGAGGTCATTTGGG+AGG + chr3.3:93159784-93159803 MS.gene69407:CDS 45.0%
!! AGCTGAGATGAAAGGCATTC+TGG - chr3.3:93159824-93159843 None:intergenic 45.0%
AAACGGGGACTTGGACATAG+TGG - chr3.3:93159506-93159525 None:intergenic 50.0%
AACGGGGACTTGGACATAGT+GGG - chr3.3:93159505-93159524 None:intergenic 50.0%
AAGGACAGCCAAGACCACAT+GGG - chr3.3:93160632-93160651 None:intergenic 50.0%
ACTTGGCATTGCACATTGCC+AGG - chr3.3:93161047-93161066 None:intergenic 50.0%
ATGGTTTCCACCTCTTGGAG+AGG - chr3.3:93158792-93158811 None:intergenic 50.0%
CCAAGAGGTGGAAACCATTG+TGG + chr3.3:93158794-93158813 MS.gene69407:CDS 50.0%
CCACAATGGTTTCCACCTCT+TGG - chr3.3:93158797-93158816 None:intergenic 50.0%
CTCACTAATGCTGACAGGTC+AGG + chr3.3:93160869-93160888 MS.gene69407:intron 50.0%
CTGACCTGTCAGCATTAGTG+AGG - chr3.3:93160871-93160890 None:intergenic 50.0%
GGTCGATGAAATCGAGAGTG+AGG - chr3.3:93158828-93158847 None:intergenic 50.0%
GGTGTCTTTGGTTGGGAGAA+AGG - chr3.3:93158755-93158774 None:intergenic 50.0%
TATATTCTAGCGCGAGCCGA+TGG + chr3.3:93160089-93160108 MS.gene69407:intron 50.0%
TCCTCTCTTCCTGCTTTCCA+GGG + chr3.3:93159362-93159381 MS.gene69407:CDS 50.0%
TTCCTCTCTTCCTGCTTTCC+AGG + chr3.3:93159361-93159380 MS.gene69407:CDS 50.0%
! GGTTTTGCTAGTGGTTCACG+AGG + chr3.3:93160981-93161000 MS.gene69407:CDS 50.0%
! GTTGGCCTAAGAAGTGGATG+TGG + chr3.3:93159574-93159593 MS.gene69407:CDS 50.0%
CAAGCATCCTCTCCAAGAGG+TGG + chr3.3:93158782-93158801 MS.gene69407:CDS 55.0%
CAAGGACAGCCAAGACCACA+TGG - chr3.3:93160633-93160652 None:intergenic 55.0%
CAGGGTGAGAAAATGCCCAG+TGG + chr3.3:93160427-93160446 MS.gene69407:intron 55.0%
CCACAAGCATCCTCTCCAAG+AGG + chr3.3:93158779-93158798 MS.gene69407:CDS 55.0%
CCTCTTGGAGAGGATGCTTG+TGG - chr3.3:93158782-93158801 None:intergenic 55.0%
GCTAGTGGTTCACGAGGTAG+TGG + chr3.3:93160987-93161006 MS.gene69407:CDS 55.0%
GTGAGGACTGAGAGCCACAA+TGG - chr3.3:93158811-93158830 None:intergenic 55.0%
TATACTGAGACTCCGTGCCC+TGG - chr3.3:93159382-93159401 None:intergenic 55.0%
TCTTCCTGCTTTCCAGGGCA+CGG + chr3.3:93159367-93159386 MS.gene69407:CDS 55.0%
TGGCGACGGTGTCTTTGGTT+GGG - chr3.3:93158762-93158781 None:intergenic 55.0%
TTGCACATTGCCAGGTCTGC+CGG - chr3.3:93161039-93161058 None:intergenic 55.0%
! AGTGGTTCACGAGGTAGTGG+TGG + chr3.3:93160990-93161009 MS.gene69407:CDS 55.0%
! TGTGGTCTTGGCTGTCCTTG+TGG + chr3.3:93160633-93160652 MS.gene69407:intron 55.0%
GCCCTGGAAAGCAGGAAGAG+AGG - chr3.3:93159366-93159385 None:intergenic 60.0%
GCTTGTGGCGACGGTGTCTT+TGG - chr3.3:93158767-93158786 None:intergenic 60.0%
GGAGAGGATGCTTGTGGCGA+CGG - chr3.3:93158776-93158795 None:intergenic 60.0%
GTGGCGACGGTGTCTTTGGT+TGG - chr3.3:93158763-93158782 None:intergenic 60.0%
TCCGCTAGGACTGCACCACT+GGG - chr3.3:93160445-93160464 None:intergenic 60.0%
TGCACATTGCCAGGTCTGCC+GGG - chr3.3:93161038-93161057 None:intergenic 60.0%
!! CGACAGGGTTAGCTCCCTTC+CGG + chr3.3:93158705-93158724 MS.gene69407:CDS 60.0%
!! TCACGAGGTAGTGGTGGACG+TGG + chr3.3:93160996-93161015 MS.gene69407:CDS 60.0%
GACTCCGTGCCCTGGAAAGC+AGG - chr3.3:93159374-93159393 None:intergenic 65.0%
GCACATTGCCAGGTCTGCCG+GGG - chr3.3:93161037-93161056 None:intergenic 65.0%
GCCCAGTGGTGCAGTCCTAG+CGG + chr3.3:93160441-93160460 MS.gene69407:intron 65.0%
GGACGTGGAGGCCACAGTAG+AGG + chr3.3:93161011-93161030 MS.gene69407:CDS 65.0%
GTCCGCTAGGACTGCACCAC+TGG - chr3.3:93160446-93160465 None:intergenic 65.0%
GTTCTCAGCCGTGGTCCGCT+AGG - chr3.3:93160459-93160478 None:intergenic 65.0%
! GGTGCAGTCCTAGCGGACCA+CGG + chr3.3:93160448-93160467 MS.gene69407:intron 65.0%
!! CGAGGTAGTGGTGGACGTGG+AGG + chr3.3:93160999-93161018 MS.gene69407:CDS 65.0%
AGTAGAGGCCCCGGCAGACC+TGG + chr3.3:93161026-93161045 MS.gene69407:CDS 70.0%
GGAGGCCACAGTAGAGGCCC+CGG + chr3.3:93161017-93161036 MS.gene69407:CDS 70.0%
GTCTGCCGGGGCCTCTACTG+TGG - chr3.3:93161025-93161044 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 93158658 93161070 93158658 ID=MS.gene69407
chr3.3 mRNA 93158658 93161070 93158658 ID=MS.gene69407.t1;Parent=MS.gene69407
chr3.3 exon 93158658 93159407 93158658 ID=MS.gene69407.t1.exon1;Parent=MS.gene69407.t1
chr3.3 CDS 93158658 93159407 93158658 ID=cds.MS.gene69407.t1;Parent=MS.gene69407.t1
chr3.3 exon 93159495 93159650 93159495 ID=MS.gene69407.t1.exon2;Parent=MS.gene69407.t1
chr3.3 CDS 93159495 93159650 93159495 ID=cds.MS.gene69407.t1;Parent=MS.gene69407.t1
chr3.3 exon 93159755 93160016 93159755 ID=MS.gene69407.t1.exon3;Parent=MS.gene69407.t1
chr3.3 CDS 93159755 93160016 93159755 ID=cds.MS.gene69407.t1;Parent=MS.gene69407.t1
chr3.3 exon 93160886 93161070 93160886 ID=MS.gene69407.t1.exon4;Parent=MS.gene69407.t1
chr3.3 CDS 93160886 93161070 93160886 ID=cds.MS.gene69407.t1;Parent=MS.gene69407.t1
Gene Sequence

>MS.gene69407

ATGTCCAAATCCAAGAAGCAGCAATCATCGATTCTAATGGAAAAATGCGACAGGGTTAGCTCCCTTCCGGACTCAATTATCTGTCACATTCTCTCCTTTCTCCCAACCAAAGACACCGTCGCCACAAGCATCCTCTCCAAGAGGTGGAAACCATTGTGGCTCTCAGTCCTCACTCTCGATTTCATCGACCAAACAGCCTTCATGAACGAAACCACTCTTTGCAGTCATGTTTACTCAGTCATGCTATCGCGTGACAACACACTGCCAATACGATCATTCCGCCTCAAATGTTGTGCTGCATACCAACCCAACGAAATAACCCAACTTATCATTGCAGCAATACAAAGACGAACTGAAACCCTTGAACTTAACATGTTGTTTAATTTTTTAGACATGAAATTAGCTTCCAACATATTCACTTGTATGACGCTTACTGTTCTCAAATTAAAACACCTAACAATCCTCGGAGACATTCCTCTAATAAATAATACTATTTCACTACTCAAAACTCTCCACTTGGATAGAGTTAATTTCAACACTCATAAACAGATCATCGACTTTCTCTTGTCCTTTCCCATTCTAGAGGAATTGCAAACAAATAAAGTAAAGGTATTTCCTTTGAGGGAGTTTGTTCCTAAAACAGCAGACAAGATCAAATGCTTGCCCAATTTGGTGAAAGCCAAGCTTTCTGATAACAAACCTATTCCTCTCTTCCTGCTTTCCAGGGCACGGAGTCTCAGTATAAAGATGGTAAGTAAGAGTTTGTTTCATTTTACAAAACAATTCACAACATGATGATTGATTTCTAATGTTTTCCCGTCTTTGTAATTCATGCAGACATGGACCCACTATGTCCAAGTCCCCGTTTTTTACAATCTAACTCAAATGGAGCTATTCTCTAACTTAGAGCATAAAGGTTGGCCTAAGAAGTGGATGTGGATGCTAGAAATGCTTCAACACAGTCCAAAGCTTCAACATCTTATCATTCACGAGGTTTCACATATAATTTGATTGATTTCCTGATATCTATTTTGTTTAACTCTACCTCTACATATCTTAACTTTTGTTTTTGGTGGAAATTTACTTATTGTTTACAGGAGATAGAAAATGGGACAGAGAATGGAAATGATGATGAGGTCATTTGGGAGGACCCAAAGATTGTTCCAGAATGCCTTTCATCTCAGCTCAAAACTTGCTTGTTTAAGAATTATAGAGGCAAAAAGTGTGAGCTTCAATTTGCAGAATATGTTATGAGCAATTCAAGAGTATTAAGTAACATGACAATTCACACTGCCCGTTCCATAGATTTAAACGGGAAATACCAGATGTTACAGAAACTATCTCTGTGTCTAAGGGGGTGTAAGCTTGTATTTGAATGATGAGGGGTGGCTACGATATTTATAATTCTGTATCTCTAGCTTTTTTGTTTGATATATTCTAGCGCGAGCCGATGGTGTTTAAAAGACAATAACTCTGCCTTATTTTTTCCTCTATGTTATATACATTTTCAATTATGTATTGGCTTTCATGCAATTAAAATCCATTCAAGTTCCTCTCAACTTTTCCTTTCCTTTTGTTACCAATTGTTATTTATTTTAGTCATCTCGGTCACTATCATTTTCTAGCAGTTTTTATTAAGGTAATCATTTCCTAGCAGTTGTTTATTATATATATTGATACGAAGCATAGCTACATGGATAGAAGGGTCTAAGATATGAATTCCTGTTTTTAAGTTTGTCACTGGTGTACTTTTTTTTGGGTATTTTGGGCAGGGTGAGAAAATGCCCAGTGGTGCAGTCCTAGCGGACCACGGCTGAGAACCATAGAATTAAGAAGTCTCGCTAGATTCTAAGATGCAATACATTCACAGTTCACACTAGATTTTGCTCAGTCACTCACTCACTCACCTACTTCTCGTTTTTGAGAGAATATGCAAATTAGTTTGTGAATTTATAAGCATCAGTCAAAATGCCCATGTGGTCTTGGCTGTCCTTGTGGTGACTGTCCTTCAAAATGCCCACATCCTATGAACGATTATTAGTCTTCAACAAACTTAATCATGTTCCAGTTGAAGATTTCATAGAAATTTGATGAGAAAGTTTTAATTGATTCAGCTTAAAGAAGAAGAGGCTCTCTTGCTTGCACACACAACGTGCATCACCAAGTTTCAGAAGAAACTTCAAGCTGATACTGCTTCTAAGTTCTATCAACCTCACTAATGCTGACAGGTCAGGTAACCATACCTCCAGATCTTAATTCTTCTATTGGTAACTCTGGATCTGCCTTGCCATTTGAAACTCTTCGATCTGCAGCCAATTCTTATGGTTTTGCTAGTGGTTCACGAGGTAGTGGTGGACGTGGAGGCCACAGTAGAGGCCCCGGCAGACCTGGCAATGTGCAATGCCAAGTGTAA

Protein sequence

>MS.gene69407.t1

MSKSKKQQSSILMEKCDRVSSLPDSIICHILSFLPTKDTVATSILSKRWKPLWLSVLTLDFIDQTAFMNETTLCSHVYSVMLSRDNTLPIRSFRLKCCAAYQPNEITQLIIAAIQRRTETLELNMLFNFLDMKLASNIFTCMTLTVLKLKHLTILGDIPLINNTISLLKTLHLDRVNFNTHKQIIDFLLSFPILEELQTNKVKVFPLREFVPKTADKIKCLPNLVKAKLSDNKPIPLFLLSRARSLSIKMTWTHYVQVPVFYNLTQMELFSNLEHKGWPKKWMWMLEMLQHSPKLQHLIIHEEIENGTENGNDDEVIWEDPKIVPECLSSQLKTCLFKNYRGKKCELQFAEYVMSNSRVLSNMTIHTARSIDLNGKYQMLQKLSLCLRGCQVTIPPDLNSSIGNSGSALPFETLRSAANSYGFASGSRGSGGRGGHSRGPGRPGNVQCQV