Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72960.t1 | XP_013445781.1 | 80.9 | 467 | 84 | 3 | 1 | 466 | 1 | 463 | 1.80E-206 | 728.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72960.t1 | Q9ZV93 | 28.1 | 463 | 278 | 17 | 29 | 463 | 20 | 455 | 3.3e-28 | 127.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72960.t1 | A0A072TQY2 | 80.9 | 467 | 84 | 3 | 1 | 466 | 1 | 463 | 1.3e-206 | 728.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72960.t1 | MTR_8g468810 | 83.084 | 467 | 74 | 3 | 1 | 466 | 1 | 463 | 0.0 | 777 |
MS.gene72960.t1 | MTR_8g468810 | 82.667 | 375 | 60 | 3 | 1 | 374 | 1 | 371 | 0.0 | 615 |
MS.gene72960.t1 | MTR_8g058970 | 62.887 | 485 | 153 | 4 | 1 | 466 | 1 | 477 | 0.0 | 568 |
MS.gene72960.t1 | MTR_8g468810 | 82.390 | 318 | 52 | 2 | 1 | 318 | 1 | 314 | 0.0 | 520 |
MS.gene72960.t1 | MTR_8g468810 | 82.390 | 318 | 52 | 2 | 1 | 318 | 1 | 314 | 0.0 | 520 |
MS.gene72960.t1 | MTR_8g468810 | 82.390 | 318 | 52 | 2 | 1 | 318 | 1 | 314 | 0.0 | 519 |
MS.gene72960.t1 | MTR_2g083840 | 55.696 | 474 | 185 | 9 | 1 | 466 | 1 | 457 | 4.40e-162 | 468 |
MS.gene72960.t1 | MTR_4g032730 | 49.072 | 485 | 197 | 12 | 11 | 465 | 2 | 466 | 7.10e-136 | 401 |
MS.gene72960.t1 | MTR_8g062270 | 50.549 | 455 | 192 | 12 | 27 | 465 | 16 | 453 | 2.09e-134 | 397 |
MS.gene72960.t1 | MTR_8g468760 | 50.855 | 468 | 165 | 14 | 12 | 465 | 2 | 418 | 4.49e-128 | 380 |
MS.gene72960.t1 | MTR_5g092960 | 50.437 | 458 | 193 | 13 | 27 | 465 | 19 | 461 | 7.73e-121 | 362 |
MS.gene72960.t1 | MTR_8g467800 | 48.950 | 476 | 204 | 14 | 5 | 466 | 3 | 453 | 1.30e-120 | 362 |
MS.gene72960.t1 | MTR_8g468840 | 48.998 | 449 | 206 | 11 | 26 | 464 | 13 | 448 | 2.07e-120 | 361 |
MS.gene72960.t1 | MTR_8g014260 | 44.444 | 477 | 225 | 17 | 2 | 466 | 3 | 451 | 2.75e-107 | 327 |
MS.gene72960.t1 | MTR_8g058965 | 41.525 | 472 | 246 | 10 | 12 | 469 | 4 | 459 | 2.27e-96 | 300 |
MS.gene72960.t1 | MTR_8g469020 | 40.821 | 463 | 239 | 13 | 27 | 469 | 7 | 454 | 2.69e-92 | 289 |
MS.gene72960.t1 | MTR_8g445780 | 44.656 | 421 | 196 | 12 | 1 | 416 | 1 | 389 | 2.81e-92 | 287 |
MS.gene72960.t1 | MTR_8g070950 | 39.712 | 486 | 227 | 16 | 1 | 469 | 1 | 437 | 5.67e-91 | 285 |
MS.gene72960.t1 | MTR_5g092960 | 47.790 | 362 | 166 | 10 | 27 | 374 | 19 | 371 | 1.05e-85 | 270 |
MS.gene72960.t1 | MTR_8g062010 | 41.357 | 457 | 230 | 16 | 20 | 466 | 2 | 430 | 2.99e-85 | 270 |
MS.gene72960.t1 | MTR_4g050250 | 41.801 | 433 | 208 | 12 | 2 | 408 | 4 | 418 | 5.46e-84 | 266 |
MS.gene72960.t1 | MTR_8g062080 | 38.816 | 456 | 240 | 13 | 22 | 466 | 18 | 445 | 4.02e-81 | 260 |
MS.gene72960.t1 | MTR_8g467800 | 50.962 | 312 | 135 | 8 | 5 | 311 | 3 | 301 | 1.44e-75 | 242 |
MS.gene72960.t1 | MTR_8g014160 | 36.170 | 470 | 227 | 12 | 6 | 466 | 20 | 425 | 2.42e-75 | 244 |
MS.gene72960.t1 | MTR_8g062310 | 38.063 | 444 | 231 | 14 | 27 | 466 | 25 | 428 | 4.82e-73 | 238 |
MS.gene72960.t1 | MTR_8g062300 | 36.089 | 496 | 261 | 15 | 5 | 466 | 4 | 477 | 4.69e-70 | 232 |
MS.gene72960.t1 | MTR_8g467790 | 37.121 | 396 | 189 | 14 | 27 | 410 | 148 | 495 | 1.00e-59 | 205 |
MS.gene72960.t1 | MTR_4g024710 | 41.528 | 301 | 162 | 8 | 169 | 466 | 58 | 347 | 4.78e-56 | 191 |
MS.gene72960.t1 | MTR_8g077460 | 36.269 | 386 | 209 | 12 | 20 | 391 | 2 | 364 | 4.20e-48 | 171 |
MS.gene72960.t1 | MTR_8g077460 | 35.075 | 268 | 145 | 11 | 207 | 466 | 129 | 375 | 2.91e-32 | 127 |
MS.gene72960.t1 | MTR_4g024745 | 40.647 | 278 | 154 | 7 | 167 | 441 | 10 | 279 | 2.30e-46 | 163 |
MS.gene72960.t1 | MTR_8g014210 | 42.149 | 242 | 128 | 6 | 226 | 466 | 1 | 231 | 4.81e-43 | 153 |
MS.gene72960.t1 | MTR_5g021550 | 52.023 | 173 | 67 | 6 | 1 | 168 | 1 | 162 | 1.76e-42 | 149 |
MS.gene72960.t1 | MTR_1g041245 | 29.801 | 453 | 228 | 14 | 27 | 466 | 11 | 386 | 2.84e-35 | 136 |
MS.gene72960.t1 | MTR_8g014290 | 44.720 | 161 | 77 | 6 | 19 | 169 | 2 | 160 | 3.74e-33 | 124 |
MS.gene72960.t1 | MTR_4g024720 | 40.212 | 189 | 79 | 8 | 1 | 168 | 1 | 176 | 5.84e-30 | 116 |
MS.gene72960.t1 | MTR_5g080710 | 30.090 | 442 | 271 | 18 | 27 | 458 | 33 | 446 | 2.17e-29 | 120 |
MS.gene72960.t1 | MTR_5g084070 | 29.224 | 438 | 273 | 17 | 27 | 458 | 13 | 419 | 6.15e-29 | 119 |
MS.gene72960.t1 | MTR_2g086020 | 31.265 | 419 | 179 | 16 | 53 | 466 | 1 | 315 | 3.96e-28 | 114 |
MS.gene72960.t1 | MTR_3g107120 | 29.258 | 458 | 239 | 17 | 20 | 463 | 2 | 388 | 4.79e-25 | 107 |
MS.gene72960.t1 | MTR_4g056040 | 28.825 | 451 | 251 | 18 | 22 | 423 | 4 | 433 | 5.37e-25 | 108 |
MS.gene72960.t1 | MTR_8g014220 | 35.484 | 217 | 76 | 7 | 2 | 213 | 3 | 160 | 2.04e-24 | 100 |
MS.gene72960.t1 | MTR_3g107100 | 26.681 | 476 | 253 | 17 | 23 | 476 | 7 | 408 | 5.81e-24 | 104 |
MS.gene72960.t1 | MTR_7g098510 | 26.490 | 453 | 249 | 15 | 23 | 466 | 14 | 391 | 9.17e-24 | 103 |
MS.gene72960.t1 | MTR_3g109982 | 29.622 | 476 | 275 | 18 | 26 | 459 | 12 | 469 | 5.78e-23 | 103 |
MS.gene72960.t1 | MTR_5g008950 | 26.711 | 453 | 229 | 19 | 29 | 466 | 1 | 365 | 1.30e-22 | 100 |
MS.gene72960.t1 | MTR_4g056020 | 28.736 | 435 | 261 | 19 | 22 | 432 | 4 | 413 | 2.57e-22 | 100 |
MS.gene72960.t1 | MTR_7g115270 | 24.945 | 453 | 261 | 14 | 26 | 463 | 11 | 399 | 7.73e-22 | 97.8 |
MS.gene72960.t1 | MTR_4g056070 | 28.070 | 456 | 244 | 19 | 22 | 416 | 4 | 436 | 9.41e-22 | 98.2 |
MS.gene72960.t1 | MTR_3g108150 | 27.876 | 452 | 239 | 19 | 25 | 465 | 11 | 386 | 1.48e-21 | 97.1 |
MS.gene72960.t1 | MTR_7g033915 | 27.753 | 454 | 217 | 18 | 25 | 465 | 9 | 364 | 2.51e-21 | 95.9 |
MS.gene72960.t1 | MTR_4g056030 | 28.423 | 482 | 296 | 19 | 22 | 483 | 4 | 456 | 4.09e-21 | 96.7 |
MS.gene72960.t1 | MTR_4g055990 | 27.234 | 470 | 262 | 17 | 22 | 431 | 4 | 453 | 5.47e-21 | 96.3 |
MS.gene72960.t1 | MTR_4g055990 | 27.195 | 467 | 266 | 18 | 22 | 431 | 4 | 453 | 5.72e-21 | 96.3 |
MS.gene72960.t1 | MTR_3g087260 | 28.016 | 489 | 260 | 18 | 26 | 465 | 11 | 456 | 1.37e-20 | 94.7 |
MS.gene72960.t1 | MTR_7g056430 | 25.778 | 450 | 233 | 13 | 20 | 460 | 2 | 359 | 2.79e-20 | 95.5 |
MS.gene72960.t1 | MTR_7g056420 | 25.778 | 450 | 233 | 13 | 20 | 460 | 2 | 359 | 3.30e-20 | 95.1 |
MS.gene72960.t1 | MTR_4g113810 | 34.104 | 173 | 97 | 6 | 109 | 271 | 1 | 166 | 9.62e-20 | 87.0 |
MS.gene72960.t1 | MTR_7g056447 | 35.784 | 204 | 103 | 10 | 20 | 215 | 2 | 185 | 2.45e-19 | 89.0 |
MS.gene72960.t1 | MTR_7g033990 | 26.696 | 457 | 228 | 18 | 22 | 458 | 6 | 375 | 2.49e-19 | 90.5 |
MS.gene72960.t1 | MTR_2g008320 | 27.938 | 451 | 239 | 18 | 27 | 466 | 52 | 427 | 3.68e-19 | 90.5 |
MS.gene72960.t1 | MTR_7g032380 | 36.041 | 197 | 106 | 8 | 27 | 218 | 11 | 192 | 4.77e-19 | 89.0 |
MS.gene72960.t1 | MTR_1089s0010 | 25.991 | 454 | 240 | 20 | 27 | 466 | 8 | 379 | 4.88e-19 | 89.4 |
MS.gene72960.t1 | MTR_7g098570 | 26.846 | 447 | 245 | 16 | 27 | 465 | 20 | 392 | 6.08e-19 | 90.1 |
MS.gene72960.t1 | MTR_3g071850 | 27.171 | 449 | 253 | 18 | 20 | 458 | 17 | 401 | 1.02e-18 | 90.1 |
MS.gene72960.t1 | MTR_7g026500 | 24.532 | 481 | 260 | 14 | 1 | 465 | 1 | 394 | 1.35e-18 | 88.2 |
MS.gene72960.t1 | MTR_3g023630 | 26.292 | 445 | 237 | 18 | 24 | 459 | 5 | 367 | 2.99e-18 | 87.0 |
MS.gene72960.t1 | MTR_1g038710 | 26.118 | 425 | 278 | 13 | 27 | 431 | 19 | 427 | 8.10e-18 | 86.3 |
MS.gene72960.t1 | MTR_3g108560 | 26.164 | 451 | 241 | 16 | 26 | 465 | 19 | 388 | 1.30e-17 | 85.1 |
MS.gene72960.t1 | MTR_4g055580 | 26.939 | 490 | 281 | 19 | 17 | 452 | 90 | 556 | 1.40e-17 | 86.3 |
MS.gene72960.t1 | MTR_2g008310 | 26.932 | 453 | 235 | 21 | 27 | 466 | 2 | 371 | 4.18e-17 | 83.6 |
MS.gene72960.t1 | MTR_3g107160 | 29.665 | 209 | 129 | 5 | 19 | 221 | 2 | 198 | 6.14e-17 | 83.2 |
MS.gene72960.t1 | MTR_3g082890 | 26.124 | 467 | 239 | 17 | 27 | 466 | 97 | 484 | 6.31e-17 | 84.0 |
MS.gene72960.t1 | MTR_6g011460 | 26.471 | 476 | 252 | 18 | 7 | 466 | 28 | 421 | 1.17e-16 | 82.4 |
MS.gene72960.t1 | MTR_5g008920 | 37.073 | 205 | 99 | 11 | 24 | 218 | 6 | 190 | 4.53e-16 | 80.5 |
MS.gene72960.t1 | MTR_8g085430 | 33.333 | 210 | 109 | 7 | 23 | 218 | 7 | 199 | 6.80e-16 | 79.3 |
MS.gene72960.t1 | MTR_6g045333 | 25.658 | 456 | 265 | 16 | 20 | 465 | 54 | 445 | 1.71e-15 | 79.0 |
MS.gene72960.t1 | MTR_7g088260 | 23.937 | 447 | 270 | 12 | 21 | 466 | 85 | 462 | 2.87e-15 | 78.6 |
MS.gene72960.t1 | MTR_8g014230 | 52.000 | 75 | 32 | 2 | 382 | 456 | 25 | 95 | 3.20e-15 | 72.0 |
MS.gene72960.t1 | MTR_3g040700 | 29.817 | 218 | 134 | 6 | 7 | 218 | 22 | 226 | 3.47e-15 | 78.2 |
MS.gene72960.t1 | MTR_2g007400 | 25.902 | 471 | 249 | 21 | 22 | 466 | 7 | 403 | 5.41e-15 | 77.4 |
MS.gene72960.t1 | MTR_0543s0010 | 24.896 | 482 | 277 | 17 | 26 | 465 | 11 | 449 | 6.01e-15 | 77.4 |
MS.gene72960.t1 | MTR_2g007500 | 33.654 | 208 | 105 | 7 | 20 | 220 | 7 | 188 | 6.61e-15 | 76.3 |
MS.gene72960.t1 | MTR_6g022500 | 34.653 | 202 | 115 | 8 | 21 | 218 | 95 | 283 | 7.88e-15 | 77.4 |
MS.gene72960.t1 | MTR_4g093690 | 34.010 | 197 | 107 | 8 | 27 | 215 | 18 | 199 | 1.70e-14 | 74.3 |
MS.gene72960.t1 | MTR_3g036250 | 31.980 | 197 | 116 | 5 | 27 | 218 | 5 | 188 | 2.91e-14 | 74.7 |
MS.gene72960.t1 | MTR_4g024770 | 49.315 | 73 | 25 | 2 | 2 | 74 | 10 | 70 | 8.58e-14 | 67.0 |
MS.gene72960.t1 | MTR_7g055943 | 25.597 | 461 | 251 | 21 | 23 | 466 | 36 | 421 | 1.50e-13 | 73.2 |
MS.gene72960.t1 | MTR_2g072720 | 24.943 | 441 | 286 | 15 | 14 | 432 | 26 | 443 | 2.33e-13 | 72.8 |
MS.gene72960.t1 | MTR_5g073420 | 23.608 | 449 | 257 | 15 | 27 | 467 | 11 | 381 | 2.62e-13 | 72.0 |
MS.gene72960.t1 | MTR_3g048290 | 26.233 | 446 | 270 | 18 | 18 | 431 | 14 | 432 | 8.07e-13 | 70.9 |
MS.gene72960.t1 | MTR_7g032370 | 33.880 | 183 | 104 | 7 | 39 | 218 | 2 | 170 | 8.92e-13 | 70.1 |
MS.gene72960.t1 | MTR_7g034110 | 31.760 | 233 | 122 | 12 | 21 | 240 | 5 | 213 | 1.15e-12 | 69.7 |
MS.gene72960.t1 | MTR_4g080787 | 24.831 | 443 | 265 | 19 | 27 | 431 | 19 | 431 | 2.73e-12 | 69.3 |
MS.gene72960.t1 | MTR_5g083890 | 31.707 | 205 | 120 | 7 | 26 | 215 | 5 | 204 | 4.10e-12 | 68.9 |
MS.gene72960.t1 | MTR_2g072530 | 22.340 | 470 | 305 | 19 | 26 | 468 | 12 | 448 | 1.01e-11 | 67.4 |
MS.gene72960.t1 | MTR_1g107385 | 27.403 | 489 | 241 | 22 | 13 | 463 | 8 | 420 | 1.30e-11 | 67.0 |
MS.gene72960.t1 | MTR_5g058100 | 33.168 | 202 | 123 | 6 | 21 | 221 | 3 | 193 | 1.58e-11 | 66.6 |
MS.gene72960.t1 | MTR_7g034115 | 32.212 | 208 | 113 | 9 | 27 | 225 | 11 | 199 | 1.72e-11 | 66.2 |
MS.gene72960.t1 | MTR_1g090900 | 33.143 | 175 | 105 | 4 | 20 | 194 | 4 | 166 | 4.38e-11 | 62.8 |
MS.gene72960.t1 | MTR_2g082880 | 25.175 | 429 | 276 | 13 | 19 | 431 | 2 | 401 | 6.21e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72960.t1 | AT4G26340 | 29.759 | 457 | 265 | 17 | 27 | 466 | 2 | 419 | 1.83e-35 | 137 |
MS.gene72960.t1 | AT1G16930 | 28.189 | 486 | 256 | 22 | 25 | 466 | 13 | 449 | 1.84e-32 | 129 |
MS.gene72960.t1 | AT1G16930 | 28.189 | 486 | 256 | 22 | 25 | 466 | 13 | 449 | 1.84e-32 | 129 |
MS.gene72960.t1 | AT1G16930 | 28.189 | 486 | 256 | 22 | 25 | 466 | 13 | 449 | 1.84e-32 | 129 |
MS.gene72960.t1 | AT5G56420 | 27.371 | 464 | 272 | 18 | 24 | 466 | 3 | 422 | 7.65e-31 | 124 |
MS.gene72960.t1 | AT5G56420 | 27.371 | 464 | 272 | 18 | 24 | 466 | 3 | 422 | 7.65e-31 | 124 |
MS.gene72960.t1 | AT5G56420 | 27.371 | 464 | 272 | 18 | 24 | 466 | 3 | 422 | 7.65e-31 | 124 |
MS.gene72960.t1 | AT1G78750 | 27.859 | 481 | 289 | 18 | 11 | 463 | 5 | 455 | 1.66e-30 | 124 |
MS.gene72960.t1 | AT1G78750 | 27.859 | 481 | 289 | 18 | 11 | 463 | 5 | 455 | 1.66e-30 | 124 |
MS.gene72960.t1 | AT5G56370 | 27.527 | 465 | 265 | 20 | 27 | 465 | 2 | 420 | 1.06e-28 | 118 |
MS.gene72960.t1 | AT5G56370 | 27.527 | 465 | 265 | 20 | 27 | 465 | 2 | 420 | 1.06e-28 | 118 |
MS.gene72960.t1 | AT1G78760 | 28.145 | 469 | 267 | 25 | 24 | 463 | 13 | 440 | 1.58e-28 | 118 |
MS.gene72960.t1 | AT4G10400 | 26.726 | 449 | 277 | 17 | 27 | 465 | 2 | 408 | 1.10e-27 | 115 |
MS.gene72960.t1 | AT4G10400 | 26.726 | 449 | 277 | 17 | 27 | 465 | 2 | 408 | 1.10e-27 | 115 |
MS.gene72960.t1 | AT4G10400 | 26.726 | 449 | 277 | 17 | 27 | 465 | 2 | 408 | 1.10e-27 | 115 |
MS.gene72960.t1 | AT5G53840 | 26.964 | 471 | 291 | 20 | 17 | 469 | 8 | 443 | 1.47e-27 | 115 |
MS.gene72960.t1 | AT5G38590 | 27.685 | 419 | 252 | 17 | 27 | 431 | 2 | 383 | 7.08e-26 | 110 |
MS.gene72960.t1 | AT3G50710 | 26.898 | 461 | 281 | 17 | 27 | 466 | 2 | 427 | 8.53e-26 | 110 |
MS.gene72960.t1 | AT5G22730 | 27.347 | 490 | 286 | 21 | 7 | 463 | 11 | 463 | 2.78e-25 | 108 |
MS.gene72960.t1 | AT5G22730 | 27.347 | 490 | 286 | 21 | 7 | 463 | 11 | 463 | 2.78e-25 | 108 |
MS.gene72960.t1 | AT1G55660 | 26.593 | 455 | 302 | 16 | 27 | 465 | 53 | 491 | 4.15e-25 | 108 |
MS.gene72960.t1 | AT1G80470 | 25.370 | 473 | 286 | 21 | 24 | 471 | 12 | 442 | 6.82e-25 | 107 |
MS.gene72960.t1 | AT1G66310 | 27.966 | 472 | 280 | 21 | 14 | 463 | 6 | 439 | 9.00e-25 | 107 |
MS.gene72960.t1 | AT2G26030 | 27.696 | 473 | 272 | 23 | 25 | 463 | 2 | 438 | 1.62e-24 | 106 |
MS.gene72960.t1 | AT2G26030 | 27.696 | 473 | 272 | 23 | 25 | 463 | 2 | 438 | 1.62e-24 | 106 |
MS.gene72960.t1 | AT1G32375 | 26.696 | 457 | 282 | 18 | 27 | 466 | 2 | 422 | 2.03e-24 | 105 |
MS.gene72960.t1 | AT1G32375 | 26.696 | 457 | 282 | 18 | 27 | 466 | 2 | 422 | 2.03e-24 | 105 |
MS.gene72960.t1 | AT5G22720 | 27.525 | 505 | 285 | 25 | 1 | 465 | 1 | 464 | 3.62e-24 | 105 |
MS.gene72960.t1 | AT5G38570 | 26.281 | 449 | 250 | 15 | 27 | 467 | 2 | 377 | 6.25e-24 | 103 |
MS.gene72960.t1 | AT4G00160 | 29.158 | 463 | 273 | 20 | 26 | 466 | 15 | 444 | 1.10e-23 | 104 |
MS.gene72960.t1 | AT3G52680 | 29.221 | 462 | 272 | 21 | 26 | 466 | 20 | 447 | 1.14e-23 | 104 |
MS.gene72960.t1 | AT5G56440 | 26.623 | 462 | 282 | 18 | 27 | 465 | 2 | 429 | 1.24e-23 | 103 |
MS.gene72960.t1 | AT5G60610 | 26.636 | 428 | 250 | 17 | 27 | 432 | 2 | 387 | 1.53e-23 | 102 |
MS.gene72960.t1 | AT5G60610 | 26.636 | 428 | 250 | 17 | 27 | 432 | 2 | 387 | 1.53e-23 | 102 |
MS.gene72960.t1 | AT1G69630 | 27.234 | 470 | 270 | 21 | 27 | 463 | 18 | 448 | 1.67e-23 | 103 |
MS.gene72960.t1 | AT1G51370 | 27.233 | 459 | 269 | 22 | 26 | 463 | 18 | 432 | 5.25e-23 | 102 |
MS.gene72960.t1 | AT2G26860 | 28.140 | 430 | 251 | 20 | 27 | 432 | 2 | 397 | 6.26e-23 | 101 |
MS.gene72960.t1 | AT2G26860 | 28.140 | 430 | 251 | 20 | 27 | 432 | 2 | 397 | 6.26e-23 | 101 |
MS.gene72960.t1 | AT2G04230 | 28.103 | 427 | 260 | 15 | 25 | 432 | 11 | 409 | 7.75e-23 | 101 |
MS.gene72960.t1 | AT4G00315 | 26.813 | 455 | 301 | 16 | 27 | 465 | 2 | 440 | 2.10e-22 | 100 |
MS.gene72960.t1 | AT5G38590 | 29.352 | 293 | 176 | 12 | 27 | 311 | 2 | 271 | 4.47e-22 | 96.7 |
MS.gene72960.t1 | AT1G06630 | 28.191 | 376 | 212 | 13 | 26 | 374 | 11 | 355 | 8.45e-22 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.191 | 376 | 212 | 13 | 26 | 374 | 11 | 355 | 8.45e-22 | 97.4 |
MS.gene72960.t1 | AT5G62970 | 26.964 | 471 | 288 | 19 | 27 | 465 | 2 | 448 | 9.86e-22 | 98.2 |
MS.gene72960.t1 | AT5G56820 | 28.033 | 478 | 264 | 23 | 19 | 470 | 7 | 430 | 1.31e-21 | 97.8 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 11 | 353 | 1.33e-21 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 11 | 353 | 1.33e-21 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 11 | 353 | 1.33e-21 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 11 | 353 | 1.33e-21 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 20 | 362 | 1.37e-21 | 97.4 |
MS.gene72960.t1 | AT1G06630 | 28.075 | 374 | 211 | 13 | 26 | 372 | 11 | 353 | 1.83e-21 | 97.8 |
MS.gene72960.t1 | AT1G06630 | 30.164 | 305 | 187 | 10 | 26 | 318 | 11 | 301 | 2.42e-21 | 95.1 |
MS.gene72960.t1 | AT5G22670 | 29.175 | 473 | 261 | 24 | 24 | 463 | 8 | 439 | 4.26e-21 | 96.3 |
MS.gene72960.t1 | AT5G53635 | 25.380 | 461 | 283 | 18 | 29 | 465 | 2 | 425 | 4.69e-21 | 95.9 |
MS.gene72960.t1 | AT1G55660 | 28.333 | 300 | 198 | 9 | 27 | 321 | 53 | 340 | 7.26e-21 | 94.7 |
MS.gene72960.t1 | AT4G14096 | 29.180 | 305 | 191 | 10 | 26 | 317 | 7 | 299 | 8.55e-21 | 95.5 |
MS.gene72960.t1 | AT4G14096 | 29.180 | 305 | 191 | 10 | 26 | 317 | 7 | 299 | 8.55e-21 | 95.5 |
MS.gene72960.t1 | AT4G13985 | 25.000 | 480 | 305 | 18 | 12 | 463 | 4 | 456 | 1.14e-20 | 95.1 |
MS.gene72960.t1 | AT1G13780 | 27.752 | 436 | 263 | 18 | 27 | 432 | 10 | 423 | 2.77e-20 | 94.0 |
MS.gene72960.t1 | AT1G05080 | 27.074 | 458 | 285 | 18 | 26 | 465 | 12 | 438 | 3.02e-20 | 93.6 |
MS.gene72960.t1 | AT5G56370 | 29.693 | 293 | 174 | 12 | 27 | 313 | 2 | 268 | 7.04e-20 | 90.9 |
MS.gene72960.t1 | AT4G14103 | 29.022 | 317 | 189 | 11 | 23 | 317 | 4 | 306 | 8.28e-20 | 91.7 |
MS.gene72960.t1 | AT4G14103 | 29.022 | 317 | 189 | 11 | 23 | 317 | 4 | 306 | 8.28e-20 | 91.7 |
MS.gene72960.t1 | AT4G14103 | 29.206 | 315 | 187 | 11 | 25 | 317 | 6 | 306 | 9.45e-20 | 92.4 |
MS.gene72960.t1 | AT5G56400 | 25.591 | 465 | 283 | 17 | 25 | 466 | 31 | 455 | 1.03e-19 | 92.0 |
MS.gene72960.t1 | AT5G56380 | 27.409 | 467 | 283 | 21 | 27 | 466 | 2 | 439 | 1.22e-19 | 92.0 |
MS.gene72960.t1 | AT5G56380 | 27.409 | 467 | 283 | 21 | 27 | 466 | 2 | 439 | 1.22e-19 | 92.0 |
MS.gene72960.t1 | AT5G56810 | 27.521 | 476 | 279 | 22 | 14 | 465 | 2 | 435 | 1.56e-19 | 91.7 |
MS.gene72960.t1 | AT3G58940 | 25.870 | 460 | 259 | 19 | 27 | 449 | 2 | 416 | 1.74e-19 | 92.4 |
MS.gene72960.t1 | AT3G58940 | 25.870 | 460 | 259 | 19 | 27 | 449 | 2 | 416 | 1.74e-19 | 92.4 |
MS.gene72960.t1 | AT5G18780 | 27.176 | 471 | 284 | 21 | 18 | 463 | 2 | 438 | 3.37e-19 | 90.5 |
MS.gene72960.t1 | AT5G18780 | 27.176 | 471 | 284 | 21 | 18 | 463 | 2 | 438 | 3.37e-19 | 90.5 |
MS.gene72960.t1 | AT5G27750 | 26.638 | 473 | 294 | 20 | 27 | 466 | 5 | 457 | 7.81e-19 | 89.7 |
MS.gene72960.t1 | AT3G49030 | 25.221 | 452 | 275 | 17 | 26 | 468 | 20 | 417 | 1.77e-18 | 88.2 |
MS.gene72960.t1 | AT4G15060 | 28.212 | 397 | 225 | 20 | 27 | 401 | 26 | 384 | 3.72e-18 | 87.4 |
MS.gene72960.t1 | AT3G54910 | 26.494 | 385 | 249 | 13 | 88 | 466 | 17 | 373 | 1.47e-17 | 84.7 |
MS.gene72960.t1 | AT3G54910 | 26.494 | 385 | 249 | 13 | 88 | 466 | 17 | 373 | 1.47e-17 | 84.7 |
MS.gene72960.t1 | AT3G54910 | 26.494 | 385 | 249 | 13 | 88 | 466 | 17 | 373 | 1.47e-17 | 84.7 |
MS.gene72960.t1 | AT4G13965 | 28.319 | 452 | 272 | 20 | 25 | 463 | 8 | 420 | 1.82e-17 | 85.1 |
MS.gene72960.t1 | AT3G59200 | 28.417 | 278 | 176 | 12 | 25 | 291 | 5 | 270 | 2.53e-17 | 84.0 |
MS.gene72960.t1 | AT5G56700 | 26.700 | 397 | 235 | 18 | 66 | 446 | 2 | 358 | 2.90e-17 | 84.0 |
MS.gene72960.t1 | AT4G22280 | 28.307 | 378 | 226 | 15 | 27 | 388 | 2 | 350 | 3.14e-17 | 84.3 |
MS.gene72960.t1 | AT4G15060 | 29.605 | 304 | 174 | 15 | 27 | 311 | 172 | 454 | 3.70e-17 | 84.7 |
MS.gene72960.t1 | AT3G59200 | 28.417 | 278 | 176 | 12 | 25 | 291 | 5 | 270 | 6.65e-17 | 84.0 |
MS.gene72960.t1 | AT5G41840 | 25.641 | 429 | 251 | 17 | 27 | 401 | 14 | 428 | 7.42e-17 | 84.0 |
MS.gene72960.t1 | AT1G51370 | 26.396 | 394 | 240 | 17 | 26 | 404 | 18 | 376 | 9.54e-17 | 82.8 |
MS.gene72960.t1 | AT4G09920 | 29.000 | 300 | 182 | 15 | 27 | 316 | 2 | 280 | 1.04e-16 | 81.6 |
MS.gene72960.t1 | AT4G09920 | 29.000 | 300 | 182 | 15 | 27 | 316 | 2 | 280 | 1.04e-16 | 81.6 |
MS.gene72960.t1 | AT4G10420 | 25.145 | 346 | 224 | 14 | 129 | 465 | 2 | 321 | 1.16e-16 | 81.6 |
MS.gene72960.t1 | AT5G56390 | 25.821 | 457 | 287 | 16 | 27 | 465 | 2 | 424 | 1.93e-16 | 82.0 |
MS.gene72960.t1 | AT3G49480 | 25.503 | 447 | 269 | 20 | 26 | 441 | 11 | 424 | 2.26e-16 | 82.0 |
MS.gene72960.t1 | AT5G22730 | 27.990 | 393 | 226 | 18 | 7 | 370 | 11 | 375 | 2.42e-16 | 81.3 |
MS.gene72960.t1 | AT4G09920 | 28.859 | 298 | 181 | 15 | 27 | 314 | 2 | 278 | 3.10e-16 | 79.7 |
MS.gene72960.t1 | AT4G09920 | 28.859 | 298 | 181 | 15 | 27 | 314 | 2 | 278 | 3.10e-16 | 79.7 |
MS.gene72960.t1 | AT4G09920 | 28.859 | 298 | 181 | 15 | 27 | 314 | 2 | 278 | 3.10e-16 | 79.7 |
MS.gene72960.t1 | AT4G22280 | 31.228 | 285 | 167 | 11 | 27 | 301 | 2 | 267 | 3.57e-16 | 80.1 |
MS.gene72960.t1 | AT3G26930 | 26.793 | 474 | 280 | 22 | 24 | 472 | 18 | 449 | 3.90e-16 | 81.3 |
MS.gene72960.t1 | AT5G56410 | 24.829 | 439 | 268 | 16 | 27 | 432 | 2 | 411 | 4.55e-16 | 81.3 |
MS.gene72960.t1 | AT3G52680 | 30.943 | 265 | 159 | 11 | 10 | 265 | 4 | 253 | 5.75e-16 | 80.1 |
MS.gene72960.t1 | AT5G53640 | 28.372 | 215 | 128 | 8 | 8 | 217 | 3 | 196 | 2.04e-15 | 75.9 |
MS.gene72960.t1 | AT1G60410 | 24.826 | 431 | 271 | 17 | 24 | 433 | 7 | 405 | 3.18e-15 | 78.2 |
MS.gene72960.t1 | AT5G56560 | 22.271 | 458 | 292 | 14 | 28 | 466 | 6 | 418 | 5.43e-15 | 77.4 |
MS.gene72960.t1 | AT3G26922 | 30.218 | 321 | 172 | 16 | 21 | 317 | 7 | 299 | 6.76e-15 | 75.9 |
MS.gene72960.t1 | AT3G26922 | 30.218 | 321 | 172 | 16 | 21 | 317 | 7 | 299 | 6.76e-15 | 75.9 |
MS.gene72960.t1 | AT3G26920 | 27.221 | 349 | 216 | 15 | 130 | 465 | 16 | 339 | 2.99e-14 | 74.3 |
MS.gene72960.t1 | AT3G26920 | 27.221 | 349 | 216 | 15 | 130 | 465 | 16 | 339 | 2.99e-14 | 74.3 |
MS.gene72960.t1 | AT5G18780 | 33.333 | 264 | 135 | 14 | 18 | 264 | 2 | 241 | 3.21e-14 | 74.7 |
MS.gene72960.t1 | AT5G18780 | 33.333 | 264 | 135 | 14 | 18 | 264 | 2 | 241 | 3.21e-14 | 74.7 |
MS.gene72960.t1 | AT3G44810 | 30.738 | 244 | 143 | 8 | 29 | 257 | 9 | 241 | 4.60e-14 | 74.7 |
MS.gene72960.t1 | AT1G13780 | 27.879 | 330 | 200 | 13 | 27 | 330 | 10 | 327 | 5.29e-14 | 73.6 |
MS.gene72960.t1 | AT5G50270 | 25.968 | 439 | 265 | 19 | 27 | 441 | 2 | 404 | 8.79e-14 | 73.6 |
MS.gene72960.t1 | AT5G44980 | 26.402 | 428 | 264 | 21 | 25 | 429 | 2 | 401 | 1.92e-13 | 72.8 |
MS.gene72960.t1 | AT5G44980 | 26.402 | 428 | 264 | 21 | 25 | 429 | 2 | 401 | 1.92e-13 | 72.8 |
MS.gene72960.t1 | AT5G41830 | 25.995 | 377 | 233 | 14 | 26 | 371 | 12 | 373 | 2.02e-13 | 73.2 |
MS.gene72960.t1 | AT3G62430 | 26.170 | 470 | 281 | 20 | 27 | 465 | 2 | 436 | 3.81e-13 | 72.0 |
MS.gene72960.t1 | AT3G44060 | 27.508 | 309 | 184 | 13 | 29 | 318 | 1 | 288 | 6.36e-13 | 71.2 |
MS.gene72960.t1 | AT5G38590 | 28.000 | 225 | 141 | 8 | 93 | 311 | 27 | 236 | 6.58e-13 | 69.3 |
MS.gene72960.t1 | AT2G29930 | 24.641 | 487 | 281 | 21 | 26 | 465 | 11 | 458 | 1.14e-12 | 70.5 |
MS.gene72960.t1 | AT2G29930 | 24.641 | 487 | 281 | 21 | 26 | 465 | 11 | 458 | 1.14e-12 | 70.5 |
MS.gene72960.t1 | AT4G00320 | 24.274 | 379 | 243 | 13 | 23 | 371 | 9 | 373 | 1.14e-12 | 70.5 |
MS.gene72960.t1 | AT5G35995 | 24.746 | 493 | 278 | 22 | 25 | 465 | 3 | 454 | 1.56e-12 | 70.1 |
MS.gene72960.t1 | AT5G35995 | 24.746 | 493 | 278 | 22 | 25 | 465 | 3 | 454 | 1.56e-12 | 70.1 |
MS.gene72960.t1 | AT5G56700 | 29.148 | 223 | 138 | 10 | 66 | 282 | 2 | 210 | 1.63e-12 | 68.6 |
MS.gene72960.t1 | AT2G26030 | 26.703 | 367 | 215 | 19 | 129 | 463 | 21 | 365 | 1.87e-12 | 69.3 |
MS.gene72960.t1 | AT3G59170 | 29.856 | 278 | 153 | 10 | 25 | 265 | 5 | 277 | 1.98e-12 | 69.7 |
MS.gene72960.t1 | AT3G59210 | 30.677 | 251 | 150 | 10 | 26 | 264 | 6 | 244 | 2.05e-12 | 69.7 |
MS.gene72960.t1 | AT3G59210 | 30.677 | 251 | 150 | 10 | 26 | 264 | 6 | 244 | 2.05e-12 | 69.7 |
MS.gene72960.t1 | AT3G59210 | 30.677 | 251 | 150 | 10 | 26 | 264 | 6 | 244 | 2.05e-12 | 69.7 |
MS.gene72960.t1 | AT3G59210 | 30.677 | 251 | 150 | 10 | 26 | 264 | 6 | 244 | 2.05e-12 | 69.7 |
MS.gene72960.t1 | AT3G59210 | 30.677 | 251 | 150 | 10 | 26 | 264 | 6 | 244 | 2.05e-12 | 69.7 |
MS.gene72960.t1 | AT3G42770 | 25.980 | 408 | 255 | 15 | 29 | 418 | 1 | 379 | 1.10e-11 | 67.8 |
MS.gene72960.t1 | AT5G38390 | 26.457 | 446 | 246 | 19 | 27 | 429 | 2 | 408 | 1.20e-11 | 67.4 |
MS.gene72960.t1 | AT1G56610 | 30.112 | 269 | 151 | 13 | 20 | 268 | 3 | 254 | 3.50e-11 | 65.9 |
MS.gene72960.t1 | AT5G44960 | 24.130 | 431 | 247 | 20 | 27 | 429 | 5 | 383 | 3.64e-11 | 65.5 |
MS.gene72960.t1 | AT5G18770 | 25.460 | 326 | 203 | 11 | 9 | 317 | 14 | 316 | 3.83e-11 | 65.5 |
MS.gene72960.t1 | AT5G44490 | 23.139 | 497 | 301 | 20 | 1 | 463 | 1 | 450 | 4.71e-11 | 65.5 |
MS.gene72960.t1 | AT1G56610 | 30.112 | 269 | 151 | 13 | 20 | 268 | 66 | 317 | 4.85e-11 | 65.5 |
MS.gene72960.t1 | AT5G44490 | 23.139 | 497 | 301 | 20 | 1 | 463 | 1 | 450 | 4.90e-11 | 65.5 |
MS.gene72960.t1 | AT5G56810 | 28.302 | 318 | 180 | 15 | 14 | 304 | 2 | 298 | 4.97e-11 | 64.3 |
MS.gene72960.t1 | AT1G51370 | 26.124 | 356 | 217 | 17 | 26 | 370 | 18 | 338 | 5.14e-11 | 64.7 |
MS.gene72960.t1 | AT5G27750 | 26.738 | 374 | 230 | 16 | 27 | 370 | 5 | 364 | 5.22e-11 | 64.7 |
MS.gene72960.t1 | AT3G49040 | 26.599 | 297 | 185 | 12 | 25 | 311 | 15 | 288 | 5.24e-11 | 64.3 |
MS.gene72960.t1 | AT1G58310 | 28.231 | 294 | 172 | 12 | 25 | 291 | 6 | 287 | 5.73e-11 | 65.1 |
MS.gene72960.t1 | AT3G59160 | 26.837 | 313 | 181 | 12 | 16 | 291 | 3 | 304 | 7.86e-11 | 64.7 |
MS.gene72960.t1 | AT4G26350 | 31.818 | 198 | 116 | 8 | 27 | 220 | 2 | 184 | 9.28e-11 | 64.3 |
Find 109 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTCCAATCTTAGAAATTT+TGG | 0.135666 | 8.3:+41831423 | MS.gene72960:CDS |
TTGACCTATATTCACTTTAA+AGG | 0.147428 | 8.3:+41832181 | MS.gene72960:CDS |
TTGAAGACAATGCTTATTTC+TGG | 0.178189 | 8.3:+41832265 | MS.gene72960:CDS |
GTTAAATTTGACCAAGTTCT+AGG | 0.208686 | 8.3:+41832376 | MS.gene72960:CDS |
TCGAAAATTGTCTGAGAAAA+TGG | 0.210666 | 8.3:-41832324 | None:intergenic |
CTTGCAGGAGAGTGGGTAAA+AGG | 0.305542 | 8.3:-41831681 | None:intergenic |
AGTTCCAAAATTTCTAAGAT+TGG | 0.318329 | 8.3:-41831427 | None:intergenic |
CGGTGAGATCTTTGTGGAAT+TGG | 0.324937 | 8.3:+41831306 | MS.gene72960:CDS |
AAGTGGGATACAAGACAATT+AGG | 0.370823 | 8.3:-41832160 | None:intergenic |
AGAGGAGGTTAGTGCATGAT+AGG | 0.377152 | 8.3:-41830549 | None:intergenic |
ATTCACTTTAAAGGATATAC+AGG | 0.383467 | 8.3:+41832190 | MS.gene72960:CDS |
CCGAATCTTTGGCCAAGCTT+AGG | 0.388638 | 8.3:+41831461 | MS.gene72960:CDS |
GGCAGAGAGAAGGATATTAA+TGG | 0.390004 | 8.3:-41831401 | None:intergenic |
CGAATCTTTGGCCAAGCTTA+GGG | 0.393635 | 8.3:+41831462 | MS.gene72960:CDS |
TACGAAGGACCCGCGACATT+CGG | 0.394870 | 8.3:+41830371 | MS.gene72960:CDS |
TTAAATCTCTTCAAGGAAGA+TGG | 0.395265 | 8.3:-41831487 | None:intergenic |
ACGTACCAAAAGAGATTATT+AGG | 0.395270 | 8.3:+41831848 | MS.gene72960:intron |
AGCAAAGTCTTTGAAATGTT+CGG | 0.401003 | 8.3:-41830323 | None:intergenic |
GGATGGTGAGGGGCAGAGTA+AGG | 0.403837 | 8.3:-41832916 | None:intergenic |
AGGACGAGTTTCATCATCTA+TGG | 0.404732 | 8.3:+41832962 | MS.gene72960:CDS |
ACTCTCCTGCAAGCTCTCTC+TGG | 0.415568 | 8.3:+41831691 | MS.gene72960:CDS |
CGAAGTTATCAAGTTGAGAT+TGG | 0.421124 | 8.3:-41830414 | None:intergenic |
TGGGAAGGAAGGAAAGTATA+TGG | 0.423492 | 8.3:-41830186 | None:intergenic |
CAATGAGCCTTGTTTCTCAT+AGG | 0.428492 | 8.3:+41830227 | MS.gene72960:CDS |
CTCATAGGTATCTTCATCTC+TGG | 0.436906 | 8.3:+41830242 | MS.gene72960:CDS |
GGCATCGCCAAGTGTGATAT+CGG | 0.438417 | 8.3:-41831581 | None:intergenic |
CCTAAGCTTGGCCAAAGATT+CGG | 0.439078 | 8.3:-41831461 | None:intergenic |
AGTAAATTTAAATCTCTTCA+AGG | 0.440949 | 8.3:-41831494 | None:intergenic |
GGCCAAAGATTCGGTTGAAA+AGG | 0.442677 | 8.3:-41831452 | None:intergenic |
CGTGGATCCGCACTGCCGTT+GGG | 0.447263 | 8.3:+41830455 | MS.gene72960:CDS |
GATACATCACCACATCAATA+TGG | 0.457893 | 8.3:+41832112 | MS.gene72960:CDS |
TAATTCCAGAGAGAGCTTGC+AGG | 0.458090 | 8.3:-41831696 | None:intergenic |
TGAAGCACGTCGTACAGAAA+AGG | 0.458324 | 8.3:-41831959 | None:intergenic |
CTCTTCTCGTCTGAGGATCA+AGG | 0.463320 | 8.3:+41830505 | MS.gene72960:CDS |
CAAAATTTCTAAGATTGGAC+AGG | 0.469145 | 8.3:-41831422 | None:intergenic |
CAAGTTAATTACCTAGAACT+TGG | 0.469252 | 8.3:-41832387 | None:intergenic |
CATCGTAGAAATCAAAAGCT+TGG | 0.471473 | 8.3:-41830273 | None:intergenic |
CTTGTGTTAGTGATGTTATA+AGG | 0.476534 | 8.3:-41832937 | None:intergenic |
AGAGATTTAAATTTACTGTA+GGG | 0.479221 | 8.3:+41831500 | MS.gene72960:CDS |
TTCGGCCTCGCCATCGACGC+CGG | 0.481816 | 8.3:-41830305 | None:intergenic |
AAGAGATTTAAATTTACTGT+AGG | 0.482663 | 8.3:+41831499 | MS.gene72960:CDS |
ACTTAGAAATTGTATCAGTC+TGG | 0.491084 | 8.3:-41832889 | None:intergenic |
TACAGGATGTTCGCGTGAGA+TGG | 0.495639 | 8.3:+41832207 | MS.gene72960:CDS |
GTGTGATATCGGCGAGGCTA+AGG | 0.496306 | 8.3:-41831570 | None:intergenic |
TCTCTACGGTGAGATCTTTG+TGG | 0.502442 | 8.3:+41831300 | MS.gene72960:CDS |
ATATCCTTTAAAGTGAATAT+AGG | 0.507843 | 8.3:-41832185 | None:intergenic |
ATCCTCAAGGTGGGGCCCAA+CGG | 0.507882 | 8.3:-41830470 | None:intergenic |
GAACTTGGTCAAATTTAACT+TGG | 0.510908 | 8.3:-41832372 | None:intergenic |
ACGTGGATCCGCACTGCCGT+TGG | 0.511251 | 8.3:+41830454 | MS.gene72960:CDS |
GAAGCACGTCGTACAGAAAA+GGG | 0.514480 | 8.3:-41831958 | None:intergenic |
CCAGGAGAAGAAGAAAATGA+TGG | 0.521742 | 8.3:+41830100 | MS.gene72960:CDS |
AGTTGTAATCTCTTCAATGA+TGG | 0.525654 | 8.3:-41831352 | None:intergenic |
TCGGCCTCGCCATCGACGCC+GGG | 0.525835 | 8.3:-41830304 | None:intergenic |
TTCTACGATGAGTACTCTCC+CGG | 0.531961 | 8.3:+41830286 | MS.gene72960:CDS |
GTGCAAGTCCCCAACAAAAG+TGG | 0.536088 | 8.3:-41831602 | None:intergenic |
TGCCGTTGGGCCCCACCTTG+AGG | 0.539334 | 8.3:+41830468 | MS.gene72960:CDS |
CTCTCCCGGCGTCGATGGCG+AGG | 0.539871 | 8.3:+41830300 | MS.gene72960:CDS |
TAACATCACTAACACAAGTC+AGG | 0.539952 | 8.3:+41832942 | MS.gene72960:CDS |
AGAGAGAGCTTGCAGGAGAG+TGG | 0.545504 | 8.3:-41831689 | None:intergenic |
GAGTACTCTCCCGGCGTCGA+TGG | 0.545589 | 8.3:+41830295 | MS.gene72960:CDS |
TAAAGTGAATATAGGTCAAG+TGG | 0.551062 | 8.3:-41832177 | None:intergenic |
ACGCATCTTCCGAATGTCGC+GGG | 0.555891 | 8.3:-41830380 | None:intergenic |
ATTATGAGAGCTTGAAGCAT+AGG | 0.560373 | 8.3:-41831989 | None:intergenic |
TACAGAAAAGGGTCGAAAGT+AGG | 0.563444 | 8.3:-41831947 | None:intergenic |
GAGAGAGCTTGCAGGAGAGT+GGG | 0.567276 | 8.3:-41831688 | None:intergenic |
TCTCGCTCTCTTCTCGTCTG+AGG | 0.568024 | 8.3:+41830498 | MS.gene72960:CDS |
TGTGGAATTGGAACAATCGT+CGG | 0.568307 | 8.3:+41831318 | MS.gene72960:CDS |
TGATGTTATAAGGATGGTGA+GGG | 0.573321 | 8.3:-41832927 | None:intergenic |
AGATTGGACAGGCAGAGAGA+AGG | 0.579911 | 8.3:-41831411 | None:intergenic |
TGTAATGTACACAGTCTCTA+CGG | 0.579931 | 8.3:+41831286 | MS.gene72960:intron |
GGAAGATGGAACCCTAAGCT+TGG | 0.579963 | 8.3:-41831473 | None:intergenic |
GTTTAGTTGTAATTCAGCAA+TGG | 0.580635 | 8.3:+41831729 | MS.gene72960:CDS |
GAGGTTAGTGCATGATAGGA+TGG | 0.583085 | 8.3:-41830545 | None:intergenic |
CAGGAGAAGAAGAAAATGAT+GGG | 0.586707 | 8.3:+41830101 | MS.gene72960:CDS |
TGTTAGTGATGTTATAAGGA+TGG | 0.589770 | 8.3:-41832933 | None:intergenic |
GTGATGTTATAAGGATGGTG+AGG | 0.591669 | 8.3:-41832928 | None:intergenic |
AGTTCAAAACGAAGAAAACC+AGG | 0.596394 | 8.3:+41830082 | MS.gene72960:CDS |
CTGAACGCTCTGTTGACACG+TGG | 0.601980 | 8.3:+41830437 | MS.gene72960:CDS |
TTGTATCAGTCTGGTGAAGG+AGG | 0.603809 | 8.3:-41832880 | None:intergenic |
GAGATGAAGATCCTCAAGGT+GGG | 0.607880 | 8.3:-41830479 | None:intergenic |
AAATTGTATCAGTCTGGTGA+AGG | 0.607936 | 8.3:-41832883 | None:intergenic |
AAGAGATTACAACTAGACAT+TGG | 0.609472 | 8.3:+41831361 | MS.gene72960:CDS |
CGGAAGATGCGTCTCTCTTG+CGG | 0.610368 | 8.3:+41830391 | MS.gene72960:CDS |
TGGCAGACAGTAGATCCCCT+TGG | 0.612624 | 8.3:-41832352 | None:intergenic |
GAAGAAGAAAATGATGGGCA+AGG | 0.612809 | 8.3:+41830106 | MS.gene72960:CDS |
ACCACATCAATATGGTCTCA+CGG | 0.613811 | 8.3:+41832120 | MS.gene72960:CDS |
AGCCTCGCCGATATCACACT+TGG | 0.620507 | 8.3:+41831574 | MS.gene72960:CDS |
ACAACTAGACATTGGTAATG+TGG | 0.620834 | 8.3:+41831369 | MS.gene72960:CDS |
AGGCTAAGGTACTTAAGACC+AGG | 0.629957 | 8.3:-41831556 | None:intergenic |
AGATGAAGATCCTCAAGGTG+GGG | 0.631714 | 8.3:-41830478 | None:intergenic |
ACAGTTACCTCATGGAGAGG+AGG | 0.634577 | 8.3:-41830564 | None:intergenic |
AAAGTGAATATAGGTCAAGT+GGG | 0.636598 | 8.3:-41832176 | None:intergenic |
GACGCATCTTCCGAATGTCG+CGG | 0.638940 | 8.3:-41830381 | None:intergenic |
AAAACAGTTACCTCATGGAG+AGG | 0.640625 | 8.3:-41830567 | None:intergenic |
TCTCATAATTCAGAATGCGA+AGG | 0.644808 | 8.3:+41832003 | MS.gene72960:CDS |
ACGGCTTTCTCTCTTTACGA+AGG | 0.645259 | 8.3:+41830356 | MS.gene72960:CDS |
CGAGATGAAGATCCTCAAGG+TGG | 0.647298 | 8.3:-41830480 | None:intergenic |
GAGCGAGATGAAGATCCTCA+AGG | 0.648810 | 8.3:-41830483 | None:intergenic |
TGCATGATAGGATGGCGAGA+GGG | 0.650254 | 8.3:-41830537 | None:intergenic |
TGTTGGGGACTTGCACAGCG+TGG | 0.651349 | 8.3:+41831609 | MS.gene72960:CDS |
TGGGGACTTGCACAGCGTGG+AGG | 0.667537 | 8.3:+41831612 | MS.gene72960:CDS |
GCCGTGAGACCATATTGATG+TGG | 0.673861 | 8.3:-41832121 | None:intergenic |
GGTGGGGCCCAACGGCAGTG+CGG | 0.675625 | 8.3:-41830462 | None:intergenic |
TGTCTTGAGATAGACACACC+TGG | 0.677521 | 8.3:+41831538 | MS.gene72960:CDS |
GTGCATGATAGGATGGCGAG+AGG | 0.679069 | 8.3:-41830538 | None:intergenic |
CGCCAAGTGTGATATCGGCG+AGG | 0.680205 | 8.3:-41831576 | None:intergenic |
GAAGATACCTATGAGAAACA+AGG | 0.685034 | 8.3:-41830234 | None:intergenic |
GCACTAACCTCCTCTCCATG+AGG | 0.685181 | 8.3:+41830557 | MS.gene72960:CDS |
GATGTTATAAGGATGGTGAG+GGG | 0.724451 | 8.3:-41832926 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCAAAAAAAAAAAAAAAAC+TGG | - | chr8.3:41832578-41832597 | None:intergenic | 15.0% |
!! | ATAGAAATGAATGAAAATAT+AGG | + | chr8.3:41832804-41832823 | MS.gene72960:intron | 15.0% |
!! | CAAAACTACTAAATATATAA+TGG | - | chr8.3:41831792-41831811 | None:intergenic | 15.0% |
!! | TAACAAATAAACATTGAAAA+TGG | - | chr8.3:41830630-41830649 | None:intergenic | 15.0% |
!!! | AATGTTTTTTTAGAAAGTTT+AGG | - | chr8.3:41830897-41830916 | None:intergenic | 15.0% |
!!! | ATTTTCGAAAAATCTATAAT+AGG | - | chr8.3:41831881-41831900 | None:intergenic | 15.0% |
!!! | TATTGAAAAACTCTAAAAAT+AGG | + | chr8.3:41832552-41832571 | MS.gene72960:intron | 15.0% |
!!! | TTTAACTTAAGTTTTATTGT+GGG | + | chr8.3:41832039-41832058 | MS.gene72960:intron | 15.0% |
!!! | TTTTTATTCTAAAATTGTAC+TGG | + | chr8.3:41831142-41831161 | MS.gene72960:intron | 15.0% |
!! | AAGAGATTTAAATTTACTGT+AGG | + | chr8.3:41831499-41831518 | MS.gene72960:CDS | 20.0% |
!! | AATGGAATATATAATACACA+TGG | - | chr8.3:41831774-41831793 | None:intergenic | 20.0% |
!! | AGAGATTTAAATTTACTGTA+GGG | + | chr8.3:41831500-41831519 | MS.gene72960:CDS | 20.0% |
!! | AGTAAATTTAAATCTCTTCA+AGG | - | chr8.3:41831497-41831516 | None:intergenic | 20.0% |
!! | CTAAGTTAATTCACAATAAA+TGG | - | chr8.3:41832434-41832453 | None:intergenic | 20.0% |
!! | TTAGAAGTTATATTATGATG+TGG | + | chr8.3:41832742-41832761 | MS.gene72960:intron | 20.0% |
!! | TTGTCATATCTTTCATTAAT+TGG | - | chr8.3:41831036-41831055 | None:intergenic | 20.0% |
!!! | ATATCCTTTAAAGTGAATAT+AGG | - | chr8.3:41832188-41832207 | None:intergenic | 20.0% |
!!! | GCCAGTTTTTTTTTTTTTTT+TGG | + | chr8.3:41832574-41832593 | MS.gene72960:intron | 20.0% |
!!! | GTTTAACTTAAGTTTTATTG+TGG | + | chr8.3:41832038-41832057 | MS.gene72960:intron | 20.0% |
!!! | TTTATTTGTTACAGAGAAAT+AGG | + | chr8.3:41830639-41830658 | MS.gene72960:intron | 20.0% |
!!! | TTTTTCGAAAATGTACTTTT+CGG | + | chr8.3:41831889-41831908 | MS.gene72960:CDS | 20.0% |
! | AAATGAATGAAAATATAGGC+TGG | + | chr8.3:41832808-41832827 | MS.gene72960:intron | 25.0% |
! | AATAGTAGTAAATCTGTGTT+TGG | + | chr8.3:41832492-41832511 | MS.gene72960:intron | 25.0% |
! | ATAGTAGTAAATCTGTGTTT+GGG | + | chr8.3:41832493-41832512 | MS.gene72960:intron | 25.0% |
! | CGTTTAACTCAATTTAACTA+TGG | + | chr8.3:41832600-41832619 | MS.gene72960:intron | 25.0% |
! | TTGACCTATATTCACTTTAA+AGG | + | chr8.3:41832181-41832200 | MS.gene72960:CDS | 25.0% |
! | TTTCATATTTGAGTCATAAC+AGG | + | chr8.3:41830589-41830608 | MS.gene72960:intron | 25.0% |
!! | AAATGTACTTTTCGGAATTT+CGG | + | chr8.3:41831897-41831916 | MS.gene72960:CDS | 25.0% |
!! | ATTCACTTTAAAGGATATAC+AGG | + | chr8.3:41832190-41832209 | MS.gene72960:CDS | 25.0% |
!!! | AGTTCCAAAATTTCTAAGAT+TGG | - | chr8.3:41831430-41831449 | None:intergenic | 25.0% |
AAAATAACTCGAGGAAAACT+AGG | + | chr8.3:41830938-41830957 | MS.gene72960:intron | 30.0% | |
AAAGTGAATATAGGTCAAGT+GGG | - | chr8.3:41832179-41832198 | None:intergenic | 30.0% | |
AAGAGATTACAACTAGACAT+TGG | + | chr8.3:41831361-41831380 | MS.gene72960:CDS | 30.0% | |
ACGTACCAAAAGAGATTATT+AGG | + | chr8.3:41831848-41831867 | MS.gene72960:intron | 30.0% | |
ACTTAGAAATTGTATCAGTC+TGG | - | chr8.3:41832892-41832911 | None:intergenic | 30.0% | |
AGTTGTAATCTCTTCAATGA+TGG | - | chr8.3:41831355-41831374 | None:intergenic | 30.0% | |
ATACTAGTTGTTTATCGTAG+AGG | + | chr8.3:41832856-41832875 | MS.gene72960:intron | 30.0% | |
ATGAAAAAACAGTTACCTCA+TGG | - | chr8.3:41830575-41830594 | None:intergenic | 30.0% | |
ATGGTAGTATTACCATCTTA+TGG | + | chr8.3:41832619-41832638 | MS.gene72960:intron | 30.0% | |
CAAGTTAATTACCTAGAACT+TGG | - | chr8.3:41832390-41832409 | None:intergenic | 30.0% | |
CACAATAAATGGCATGAAAA+TGG | - | chr8.3:41832423-41832442 | None:intergenic | 30.0% | |
CTTGTGTTAGTGATGTTATA+AGG | - | chr8.3:41832940-41832959 | None:intergenic | 30.0% | |
GAACTTGGTCAAATTTAACT+TGG | - | chr8.3:41832375-41832394 | None:intergenic | 30.0% | |
GTGGTGTTTGTTTGATTATT+TGG | + | chr8.3:41832065-41832084 | MS.gene72960:intron | 30.0% | |
GTTAAATTTGACCAAGTTCT+AGG | + | chr8.3:41832376-41832395 | MS.gene72960:CDS | 30.0% | |
GTTTAGTTGTAATTCAGCAA+TGG | + | chr8.3:41831729-41831748 | MS.gene72960:CDS | 30.0% | |
TAAAGTGAATATAGGTCAAG+TGG | - | chr8.3:41832180-41832199 | None:intergenic | 30.0% | |
TACAGAGAAATAGGTACAAT+GGG | + | chr8.3:41830648-41830667 | MS.gene72960:intron | 30.0% | |
TAGTAGTAAATCTGTGTTTG+GGG | + | chr8.3:41832494-41832513 | MS.gene72960:intron | 30.0% | |
TCGAAAATTGTCTGAGAAAA+TGG | - | chr8.3:41832327-41832346 | None:intergenic | 30.0% | |
TGATCTGTATGTACATTAGT+TGG | + | chr8.3:41830819-41830838 | MS.gene72960:intron | 30.0% | |
TGGTAGTATTACCATCTTAT+GGG | + | chr8.3:41832620-41832639 | MS.gene72960:intron | 30.0% | |
TGTTAGTGATGTTATAAGGA+TGG | - | chr8.3:41832936-41832955 | None:intergenic | 30.0% | |
TGTTATCTGAAAATAACTCG+AGG | + | chr8.3:41830929-41830948 | MS.gene72960:intron | 30.0% | |
TTAAATCTCTTCAAGGAAGA+TGG | - | chr8.3:41831490-41831509 | None:intergenic | 30.0% | |
TTACAGAGAAATAGGTACAA+TGG | + | chr8.3:41830647-41830666 | MS.gene72960:intron | 30.0% | |
TTAGAAAGTTTAGGTGAGTT+GGG | - | chr8.3:41830888-41830907 | None:intergenic | 30.0% | |
TTAGACATTCACTTGCAAAA+TGG | + | chr8.3:41831118-41831137 | MS.gene72960:intron | 30.0% | |
TTGAAGACAATGCTTATTTC+TGG | + | chr8.3:41832265-41832284 | MS.gene72960:CDS | 30.0% | |
TTTAGAAAGTTTAGGTGAGT+TGG | - | chr8.3:41830889-41830908 | None:intergenic | 30.0% | |
TTTATTCCTTTCCCATAAGA+TGG | - | chr8.3:41832634-41832653 | None:intergenic | 30.0% | |
! | ACAATTTTCGAATATGCCAA+GGG | + | chr8.3:41832336-41832355 | MS.gene72960:CDS | 30.0% |
! | AGACAATTAGGAACACTTTT+CGG | - | chr8.3:41832151-41832170 | None:intergenic | 30.0% |
! | CTGTCCAATCTTAGAAATTT+TGG | + | chr8.3:41831423-41831442 | MS.gene72960:CDS | 30.0% |
! | GACTACCTAATAATCTCTTT+TGG | - | chr8.3:41831856-41831875 | None:intergenic | 30.0% |
! | GCTAGTTATGTTTTGCATTA+TGG | + | chr8.3:41832235-41832254 | MS.gene72960:CDS | 30.0% |
! | TATCAGTAAGATTTGGTCAA+TGG | - | chr8.3:41832771-41832790 | None:intergenic | 30.0% |
!! | AGCAAAGTCTTTGAAATGTT+CGG | - | chr8.3:41830326-41830345 | None:intergenic | 30.0% |
!! | CAAAATTTCTAAGATTGGAC+AGG | - | chr8.3:41831425-41831444 | None:intergenic | 30.0% |
!! | CAAGTTCTAGGTAATTAACT+TGG | + | chr8.3:41832388-41832407 | MS.gene72960:intron | 30.0% |
!!! | GCTTATTTCTGGTTTTTTGT+CGG | + | chr8.3:41832276-41832295 | MS.gene72960:CDS | 30.0% |
AAATTGTATCAGTCTGGTGA+AGG | - | chr8.3:41832886-41832905 | None:intergenic | 35.0% | |
AACCCTCTATCAGTAAGATT+TGG | - | chr8.3:41832778-41832797 | None:intergenic | 35.0% | |
AAGTGGGATACAAGACAATT+AGG | - | chr8.3:41832163-41832182 | None:intergenic | 35.0% | |
AGATATGACAAAACTCGCTA+AGG | + | chr8.3:41831045-41831064 | MS.gene72960:intron | 35.0% | |
AGTAGTAAATCTGTGTTTGG+GGG | + | chr8.3:41832495-41832514 | MS.gene72960:intron | 35.0% | |
AGTTCAAAACGAAGAAAACC+AGG | + | chr8.3:41830082-41830101 | MS.gene72960:CDS | 35.0% | |
ATCAACTTCCACTATTGATG+TGG | + | chr8.3:41830780-41830799 | MS.gene72960:intron | 35.0% | |
ATCACCAATTACTACTCCAT+CGG | - | chr8.3:41830966-41830985 | None:intergenic | 35.0% | |
ATTATGAGAGCTTGAAGCAT+AGG | - | chr8.3:41831992-41832011 | None:intergenic | 35.0% | |
CAGGAGAAGAAGAAAATGAT+GGG | + | chr8.3:41830101-41830120 | MS.gene72960:CDS | 35.0% | |
CATCGTAGAAATCAAAAGCT+TGG | - | chr8.3:41830276-41830295 | None:intergenic | 35.0% | |
GAAGATACCTATGAGAAACA+AGG | - | chr8.3:41830237-41830256 | None:intergenic | 35.0% | |
GACCAAATCTTACTGATAGA+GGG | + | chr8.3:41832773-41832792 | MS.gene72960:intron | 35.0% | |
GATACATCACCACATCAATA+TGG | + | chr8.3:41832112-41832131 | MS.gene72960:CDS | 35.0% | |
GTATTACCATCTTATGGGAA+AGG | + | chr8.3:41832625-41832644 | MS.gene72960:intron | 35.0% | |
TAACATCACTAACACAAGTC+AGG | + | chr8.3:41832942-41832961 | MS.gene72960:CDS | 35.0% | |
TCAACTTCCACTATTGATGT+GGG | + | chr8.3:41830781-41830800 | MS.gene72960:intron | 35.0% | |
TCTCATAATTCAGAATGCGA+AGG | + | chr8.3:41832003-41832022 | MS.gene72960:CDS | 35.0% | |
TGACCAAATCTTACTGATAG+AGG | + | chr8.3:41832772-41832791 | MS.gene72960:intron | 35.0% | |
TGATGTTATAAGGATGGTGA+GGG | - | chr8.3:41832930-41832949 | None:intergenic | 35.0% | |
TGTAATGTACACAGTCTCTA+CGG | + | chr8.3:41831286-41831305 | MS.gene72960:intron | 35.0% | |
! | ACAATGAAAGTTGACTCAGT+TGG | + | chr8.3:41830726-41830745 | MS.gene72960:intron | 35.0% |
! | CAATTTTCGAATATGCCAAG+GGG | + | chr8.3:41832337-41832356 | MS.gene72960:CDS | 35.0% |
! | GACAATTTTCGAATATGCCA+AGG | + | chr8.3:41832335-41832354 | MS.gene72960:CDS | 35.0% |
! | TTCCTTTTCAACCGAATCTT+TGG | + | chr8.3:41831450-41831469 | MS.gene72960:CDS | 35.0% |
!! | ACAACTAGACATTGGTAATG+TGG | + | chr8.3:41831369-41831388 | MS.gene72960:CDS | 35.0% |
!! | CGAAGTTATCAAGTTGAGAT+TGG | - | chr8.3:41830417-41830436 | None:intergenic | 35.0% |
!!! | GACTTTGCTATTTTCGTCAA+CGG | + | chr8.3:41830337-41830356 | MS.gene72960:CDS | 35.0% |
!!! | GTACACACAGTTGTTTTTGT+GGG | - | chr8.3:41830208-41830227 | None:intergenic | 35.0% |
!!! | TAAGTTTTATTGTGGGTGTG+TGG | + | chr8.3:41832046-41832065 | MS.gene72960:intron | 35.0% |
!!! | TGTACACACAGTTGTTTTTG+TGG | - | chr8.3:41830209-41830228 | None:intergenic | 35.0% |
AAAACAGTTACCTCATGGAG+AGG | - | chr8.3:41830570-41830589 | None:intergenic | 40.0% | |
ACCACATCAATATGGTCTCA+CGG | + | chr8.3:41832120-41832139 | MS.gene72960:CDS | 40.0% | |
ACGTACACAACAACAACAAG+TGG | - | chr8.3:41831832-41831851 | None:intergenic | 40.0% | |
AGAGATTCCCACATCAATAG+TGG | - | chr8.3:41830791-41830810 | None:intergenic | 40.0% | |
AGGACGAGTTTCATCATCTA+TGG | + | chr8.3:41832962-41832981 | MS.gene72960:CDS | 40.0% | |
CAACAACAAGTGGAGATACA+AGG | - | chr8.3:41831822-41831841 | None:intergenic | 40.0% | |
CCAGGAGAAGAAGAAAATGA+TGG | + | chr8.3:41830100-41830119 | MS.gene72960:CDS | 40.0% | |
CTCATAGGTATCTTCATCTC+TGG | + | chr8.3:41830242-41830261 | MS.gene72960:CDS | 40.0% | |
GAGCTCACAATGCAAAAAAC+TGG | - | chr8.3:41832521-41832540 | None:intergenic | 40.0% | |
GATGTATCCTGCAGAAAACA+AGG | - | chr8.3:41832100-41832119 | None:intergenic | 40.0% | |
GATGTTATAAGGATGGTGAG+GGG | - | chr8.3:41832929-41832948 | None:intergenic | 40.0% | |
GGCAGAGAGAAGGATATTAA+TGG | - | chr8.3:41831404-41831423 | None:intergenic | 40.0% | |
GTGATGTTATAAGGATGGTG+AGG | - | chr8.3:41832931-41832950 | None:intergenic | 40.0% | |
TACAGAAAAGGGTCGAAAGT+AGG | - | chr8.3:41831950-41831969 | None:intergenic | 40.0% | |
TGATGTGGGAATCTCTTTGT+TGG | + | chr8.3:41830795-41830814 | MS.gene72960:intron | 40.0% | |
TGTGGAATTGGAACAATCGT+CGG | + | chr8.3:41831318-41831337 | MS.gene72960:CDS | 40.0% | |
! | AAGTTGATCTCATGACCTTG+CGG | - | chr8.3:41830768-41830787 | None:intergenic | 40.0% |
! | CCATCATTTTCTTCTTCTCC+TGG | - | chr8.3:41830103-41830122 | None:intergenic | 40.0% |
! | TGGGAAGGAAGGAAAGTATA+TGG | - | chr8.3:41830189-41830208 | None:intergenic | 40.0% |
!! | CAATGAGCCTTGTTTCTCAT+AGG | + | chr8.3:41830227-41830246 | MS.gene72960:CDS | 40.0% |
!! | GAAGAAGAAAATGATGGGCA+AGG | + | chr8.3:41830106-41830125 | MS.gene72960:CDS | 40.0% |
!! | GCATTGTGAGCTCACTTTTA+AGG | + | chr8.3:41832528-41832547 | MS.gene72960:intron | 40.0% |
!!! | ACACAGTTGTTTTTGTGGGA+AGG | - | chr8.3:41830204-41830223 | None:intergenic | 40.0% |
!!! | AGTTGTACCTTGTTTTCTGC+AGG | + | chr8.3:41832090-41832109 | MS.gene72960:intron | 40.0% |
!!! | AGTTGTTTTTGTGGGAAGGA+AGG | - | chr8.3:41830200-41830219 | None:intergenic | 40.0% |
ACATTAGTTGGCACTCACAG+AGG | + | chr8.3:41830831-41830850 | MS.gene72960:intron | 45.0% | |
ACGGCTTTCTCTCTTTACGA+AGG | + | chr8.3:41830356-41830375 | MS.gene72960:CDS | 45.0% | |
AGAGGAGGTTAGTGCATGAT+AGG | - | chr8.3:41830552-41830571 | None:intergenic | 45.0% | |
AGATGAAGATCCTCAAGGTG+GGG | - | chr8.3:41830481-41830500 | None:intergenic | 45.0% | |
AGTTGATCTCATGACCTTGC+GGG | - | chr8.3:41830767-41830786 | None:intergenic | 45.0% | |
CATTAGTTGGCACTCACAGA+GGG | + | chr8.3:41830832-41830851 | MS.gene72960:intron | 45.0% | |
CCTAAGCTTGGCCAAAGATT+CGG | - | chr8.3:41831464-41831483 | None:intergenic | 45.0% | |
CGAATCTTTGGCCAAGCTTA+GGG | + | chr8.3:41831462-41831481 | MS.gene72960:CDS | 45.0% | |
CGGTGAGATCTTTGTGGAAT+TGG | + | chr8.3:41831306-41831325 | MS.gene72960:CDS | 45.0% | |
GAAGCACGTCGTACAGAAAA+GGG | - | chr8.3:41831961-41831980 | None:intergenic | 45.0% | |
GAGATGAAGATCCTCAAGGT+GGG | - | chr8.3:41830482-41830501 | None:intergenic | 45.0% | |
GAGGTTAGTGCATGATAGGA+TGG | - | chr8.3:41830548-41830567 | None:intergenic | 45.0% | |
GGATCCGATGGAGTAGTAAT+TGG | + | chr8.3:41830959-41830978 | MS.gene72960:intron | 45.0% | |
TAATTCCAGAGAGAGCTTGC+AGG | - | chr8.3:41831699-41831718 | None:intergenic | 45.0% | |
TCTCTACGGTGAGATCTTTG+TGG | + | chr8.3:41831300-41831319 | MS.gene72960:CDS | 45.0% | |
TGAAGCACGTCGTACAGAAA+AGG | - | chr8.3:41831962-41831981 | None:intergenic | 45.0% | |
TGTCTTGAGATAGACACACC+TGG | + | chr8.3:41831538-41831557 | MS.gene72960:CDS | 45.0% | |
TTCTACGATGAGTACTCTCC+CGG | + | chr8.3:41830286-41830305 | MS.gene72960:CDS | 45.0% | |
TTGTATCAGTCTGGTGAAGG+AGG | - | chr8.3:41832883-41832902 | None:intergenic | 45.0% | |
! | AGGCTAAGGTACTTAAGACC+AGG | - | chr8.3:41831559-41831578 | None:intergenic | 45.0% |
! | GGCCAAAGATTCGGTTGAAA+AGG | - | chr8.3:41831455-41831474 | None:intergenic | 45.0% |
!!! | TTGGCGATGCCACTTTTGTT+GGG | + | chr8.3:41831593-41831612 | MS.gene72960:CDS | 45.0% |
ACAGTTACCTCATGGAGAGG+AGG | - | chr8.3:41830567-41830586 | None:intergenic | 50.0% | |
AGATTGGACAGGCAGAGAGA+AGG | - | chr8.3:41831414-41831433 | None:intergenic | 50.0% | |
CCGAATCTTTGGCCAAGCTT+AGG | + | chr8.3:41831461-41831480 | MS.gene72960:CDS | 50.0% | |
CGAGATGAAGATCCTCAAGG+TGG | - | chr8.3:41830483-41830502 | None:intergenic | 50.0% | |
CGAGGAAAACTAGGATCCGA+TGG | + | chr8.3:41830947-41830966 | MS.gene72960:intron | 50.0% | |
CTCTTCTCGTCTGAGGATCA+AGG | + | chr8.3:41830505-41830524 | MS.gene72960:CDS | 50.0% | |
CTTGCAGGAGAGTGGGTAAA+AGG | - | chr8.3:41831684-41831703 | None:intergenic | 50.0% | |
GAGCGAGATGAAGATCCTCA+AGG | - | chr8.3:41830486-41830505 | None:intergenic | 50.0% | |
GCCGTGAGACCATATTGATG+TGG | - | chr8.3:41832124-41832143 | None:intergenic | 50.0% | |
GGAAGATGGAACCCTAAGCT+TGG | - | chr8.3:41831476-41831495 | None:intergenic | 50.0% | |
GGCATCGCCAAGTGTGATAT+CGG | - | chr8.3:41831584-41831603 | None:intergenic | 50.0% | |
GTGCAAGTCCCCAACAAAAG+TGG | - | chr8.3:41831605-41831624 | None:intergenic | 50.0% | |
TACAGGATGTTCGCGTGAGA+TGG | + | chr8.3:41832207-41832226 | MS.gene72960:CDS | 50.0% | |
TGCATGATAGGATGGCGAGA+GGG | - | chr8.3:41830540-41830559 | None:intergenic | 50.0% | |
! | AAGTAGTTGACTCACCCGCA+AGG | + | chr8.3:41830750-41830769 | MS.gene72960:intron | 50.0% |
!!! | CTTGGCGATGCCACTTTTGT+TGG | + | chr8.3:41831592-41831611 | MS.gene72960:CDS | 50.0% |
!!! | TGGCGATGCCACTTTTGTTG+GGG | + | chr8.3:41831594-41831613 | MS.gene72960:CDS | 50.0% |
ACGCATCTTCCGAATGTCGC+GGG | - | chr8.3:41830383-41830402 | None:intergenic | 55.0% | |
ACTCTCCTGCAAGCTCTCTC+TGG | + | chr8.3:41831691-41831710 | MS.gene72960:CDS | 55.0% | |
AGAGAGAGCTTGCAGGAGAG+TGG | - | chr8.3:41831692-41831711 | None:intergenic | 55.0% | |
AGCCTCGCCGATATCACACT+TGG | + | chr8.3:41831574-41831593 | MS.gene72960:CDS | 55.0% | |
CGGAAGATGCGTCTCTCTTG+CGG | + | chr8.3:41830391-41830410 | MS.gene72960:CDS | 55.0% | |
CTGAACGCTCTGTTGACACG+TGG | + | chr8.3:41830437-41830456 | MS.gene72960:CDS | 55.0% | |
GACGCATCTTCCGAATGTCG+CGG | - | chr8.3:41830384-41830403 | None:intergenic | 55.0% | |
GAGAGAGCTTGCAGGAGAGT+GGG | - | chr8.3:41831691-41831710 | None:intergenic | 55.0% | |
GCACTAACCTCCTCTCCATG+AGG | + | chr8.3:41830557-41830576 | MS.gene72960:CDS | 55.0% | |
GTGCATGATAGGATGGCGAG+AGG | - | chr8.3:41830541-41830560 | None:intergenic | 55.0% | |
GTGTGATATCGGCGAGGCTA+AGG | - | chr8.3:41831573-41831592 | None:intergenic | 55.0% | |
TACGAAGGACCCGCGACATT+CGG | + | chr8.3:41830371-41830390 | MS.gene72960:CDS | 55.0% | |
TCTCGCTCTCTTCTCGTCTG+AGG | + | chr8.3:41830498-41830517 | MS.gene72960:CDS | 55.0% | |
TGGCAGACAGTAGATCCCCT+TGG | - | chr8.3:41832355-41832374 | None:intergenic | 55.0% | |
! | GTTTAGGTGAGTTGGGCTCC+AGG | - | chr8.3:41830881-41830900 | None:intergenic | 55.0% |
ATCCTCAAGGTGGGGCCCAA+CGG | - | chr8.3:41830473-41830492 | None:intergenic | 60.0% | |
CGCCAAGTGTGATATCGGCG+AGG | - | chr8.3:41831579-41831598 | None:intergenic | 60.0% | |
GGATGGTGAGGGGCAGAGTA+AGG | - | chr8.3:41832919-41832938 | None:intergenic | 60.0% | |
TGTTGGGGACTTGCACAGCG+TGG | + | chr8.3:41831609-41831628 | MS.gene72960:CDS | 60.0% | |
ACGTGGATCCGCACTGCCGT+TGG | + | chr8.3:41830454-41830473 | MS.gene72960:CDS | 65.0% | |
CGTGGATCCGCACTGCCGTT+GGG | + | chr8.3:41830455-41830474 | MS.gene72960:CDS | 65.0% | |
GAGGGACATGCCTTGTCGCG+CGG | + | chr8.3:41830850-41830869 | MS.gene72960:intron | 65.0% | |
TGGGGACTTGCACAGCGTGG+AGG | + | chr8.3:41831612-41831631 | MS.gene72960:CDS | 65.0% | |
! | GAGTACTCTCCCGGCGTCGA+TGG | + | chr8.3:41830295-41830314 | MS.gene72960:CDS | 65.0% |
CCAGGAGCTACCGCGCGACA+AGG | - | chr8.3:41830863-41830882 | None:intergenic | 70.0% | |
CCTTGTCGCGCGGTAGCTCC+TGG | + | chr8.3:41830860-41830879 | MS.gene72960:intron | 70.0% | |
TGCCGTTGGGCCCCACCTTG+AGG | + | chr8.3:41830468-41830487 | MS.gene72960:CDS | 70.0% | |
TTCGGCCTCGCCATCGACGC+CGG | - | chr8.3:41830308-41830327 | None:intergenic | 70.0% | |
GGTGGGGCCCAACGGCAGTG+CGG | - | chr8.3:41830465-41830484 | None:intergenic | 75.0% | |
TCGGCCTCGCCATCGACGCC+GGG | - | chr8.3:41830307-41830326 | None:intergenic | 75.0% | |
!! | CTCTCCCGGCGTCGATGGCG+AGG | + | chr8.3:41830300-41830319 | MS.gene72960:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 41830073 | 41833006 | 41830073 | ID=MS.gene72960 |
chr8.3 | mRNA | 41830073 | 41833006 | 41830073 | ID=MS.gene72960.t1;Parent=MS.gene72960 |
chr8.3 | exon | 41830073 | 41830578 | 41830073 | ID=MS.gene72960.t1.exon1;Parent=MS.gene72960.t1 |
chr8.3 | CDS | 41830073 | 41830578 | 41830073 | ID=cds.MS.gene72960.t1;Parent=MS.gene72960.t1 |
chr8.3 | exon | 41831300 | 41831750 | 41831300 | ID=MS.gene72960.t1.exon2;Parent=MS.gene72960.t1 |
chr8.3 | CDS | 41831300 | 41831750 | 41831300 | ID=cds.MS.gene72960.t1;Parent=MS.gene72960.t1 |
chr8.3 | exon | 41831860 | 41832024 | 41831860 | ID=MS.gene72960.t1.exon3;Parent=MS.gene72960.t1 |
chr8.3 | CDS | 41831860 | 41832024 | 41831860 | ID=cds.MS.gene72960.t1;Parent=MS.gene72960.t1 |
chr8.3 | exon | 41832112 | 41832397 | 41832112 | ID=MS.gene72960.t1.exon4;Parent=MS.gene72960.t1 |
chr8.3 | CDS | 41832112 | 41832397 | 41832112 | ID=cds.MS.gene72960.t1;Parent=MS.gene72960.t1 |
chr8.3 | exon | 41832876 | 41833006 | 41832876 | ID=MS.gene72960.t1.exon5;Parent=MS.gene72960.t1 |
chr8.3 | CDS | 41832876 | 41833006 | 41832876 | ID=cds.MS.gene72960.t1;Parent=MS.gene72960.t1 |
Gene Sequence |
Protein sequence |