AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54958


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54958.t1 MTR_2g007450 55.118 381 161 5 1 379 1 373 3.96e-133 388
MS.gene54958.t1 MTR_7g083740 54.404 386 107 9 1 382 1 321 6.10e-123 360
MS.gene54958.t1 MTR_1g053025 49.041 365 163 6 17 380 1 343 8.82e-103 309
MS.gene54958.t1 MTR_2g007500 48.387 372 150 7 4 375 3 332 1.40e-101 305
MS.gene54958.t1 MTR_4g098590 47.368 361 165 6 20 380 1 336 1.31e-96 293
MS.gene54958.t1 MTR_3g026920 46.702 379 159 7 16 381 17 365 1.84e-95 291
MS.gene54958.t1 MTR_2g007550 40.731 383 133 10 4 382 3 295 8.76e-76 239
MS.gene54958.t1 MTR_5g083890 41.758 364 188 7 15 373 3 347 5.14e-73 236
MS.gene54958.t1 MTR_3g107160 42.298 383 172 16 18 392 10 351 2.30e-71 229
MS.gene54958.t1 MTR_3g107100 41.463 369 171 12 18 381 11 339 3.29e-70 226
MS.gene54958.t1 MTR_2g007400 39.779 362 190 9 16 373 10 347 2.87e-68 221
MS.gene54958.t1 MTR_1g107385 39.216 357 196 4 18 373 32 368 3.87e-67 219
MS.gene54958.t1 MTR_7g075820 38.692 367 187 9 15 373 3 339 1.07e-64 211
MS.gene54958.t1 MTR_3g107120 40.789 380 168 12 18 381 9 347 6.13e-64 210
MS.gene54958.t1 MTR_2g008320 35.809 377 196 9 6 377 40 375 1.28e-56 192
MS.gene54958.t1 MTR_2g008310 36.745 381 193 11 17 392 1 338 2.41e-56 190
MS.gene54958.t1 MTR_2g005990 37.088 364 195 10 16 373 4 339 1.44e-55 188
MS.gene54958.t1 MTR_2g007360 36.675 379 165 12 7 373 1 316 8.00e-49 169
MS.gene54958.t1 MTR_3g099830 34.435 363 179 10 16 373 10 318 3.45e-47 165
MS.gene54958.t1 MTR_7g115270 31.398 379 215 11 15 382 9 353 1.60e-43 156
MS.gene54958.t1 MTR_2g007530 38.376 271 120 7 16 241 17 285 1.03e-42 152
MS.gene54958.t1 MTR_2g007530 45.614 114 37 2 257 370 197 285 9.71e-17 80.9
MS.gene54958.t1 MTR_7g007340 34.218 377 172 11 10 379 2 309 3.38e-41 149
MS.gene54958.t1 MTR_1g041245 31.481 378 202 16 15 382 8 338 8.97e-36 135
MS.gene54958.t1 MTR_7g056433 29.820 389 211 14 7 382 1 340 1.65e-31 123
MS.gene54958.t1 MTR_7g098570 30.670 388 210 13 3 382 8 344 1.97e-31 125
MS.gene54958.t1 MTR_7g032380 28.726 369 194 15 15 382 8 308 8.00e-31 121
MS.gene54958.t1 MTR_5g073420 29.973 377 201 14 14 382 7 328 1.96e-29 117
MS.gene54958.t1 MTR_7g098510 29.620 395 204 15 3 382 7 342 3.75e-29 117
MS.gene54958.t1 MTR_6g045333 30.159 378 212 14 17 382 60 397 8.24e-29 117
MS.gene54958.t1 MTR_3g105060 28.378 370 211 11 15 382 11 328 8.79e-29 115
MS.gene54958.t1 MTR_7g033990 29.178 377 207 14 16 382 9 335 3.37e-28 115
MS.gene54958.t1 MTR_7g034115 30.769 377 203 16 15 382 8 335 4.32e-28 114
MS.gene54958.t1 MTR_7g007370 31.579 342 152 11 17 358 16 275 4.84e-28 113
MS.gene54958.t1 MTR_7g026500 28.191 376 226 12 14 382 10 348 7.41e-28 113
MS.gene54958.t1 MTR_1089s0010 29.919 371 205 13 17 382 7 327 1.48e-27 112
MS.gene54958.t1 MTR_3g108150 29.049 389 203 16 13 382 4 338 2.67e-27 112
MS.gene54958.t1 MTR_7g033915 28.351 388 180 14 15 382 8 317 3.50e-27 111
MS.gene54958.t1 MTR_5g008920 28.610 374 211 11 16 382 10 334 8.78e-27 110
MS.gene54958.t1 MTR_7g032370 28.490 351 199 14 33 382 5 304 2.21e-26 108
MS.gene54958.t1 MTR_0492s0020 28.198 383 196 13 15 382 83 401 2.42e-26 110
MS.gene54958.t1 MTR_0543s0010 28.460 383 195 14 15 382 83 401 2.82e-26 110
MS.gene54958.t1 MTR_8g085430 33.473 239 142 6 15 251 8 231 4.38e-26 107
MS.gene54958.t1 MTR_3g107140 40.933 193 86 8 49 232 23 196 9.06e-26 103
MS.gene54958.t1 MTR_6g040270 28.989 376 219 12 20 392 10 340 1.09e-25 107
MS.gene54958.t1 MTR_1g108820 30.769 377 207 15 15 382 5 336 1.11e-25 107
MS.gene54958.t1 MTR_3g040700 29.144 374 200 13 17 382 42 358 1.39e-25 107
MS.gene54958.t1 MTR_7g075800 29.798 396 216 15 15 377 6 372 2.06e-25 108
MS.gene54958.t1 MTR_3g071850 29.288 379 214 13 17 382 23 360 7.65e-25 107
MS.gene54958.t1 MTR_7g098480 28.753 393 208 14 3 382 7 340 1.06e-24 105
MS.gene54958.t1 MTR_7g088260 27.513 378 207 12 18 382 91 414 1.44e-24 105
MS.gene54958.t1 MTR_5g073340 30.056 356 180 12 17 366 7 299 1.62e-24 102
MS.gene54958.t1 MTR_5g008950 29.058 382 188 15 20 382 1 318 2.04e-24 103
MS.gene54958.t1 MTR_5g045170 28.827 392 230 15 8 392 4 353 3.47e-24 103
MS.gene54958.t1 MTR_5g082930 50.980 102 48 1 20 119 17 118 8.28e-24 98.6
MS.gene54958.t1 MTR_7g056430 30.000 380 179 13 18 382 9 316 8.40e-24 104
MS.gene54958.t1 MTR_7g056420 30.000 380 179 13 18 382 9 316 1.08e-23 103
MS.gene54958.t1 MTR_3g036250 28.877 374 202 13 17 382 4 321 1.38e-23 101
MS.gene54958.t1 MTR_1g085120 28.726 369 221 12 18 382 92 422 1.94e-23 102
MS.gene54958.t1 MTR_1g085120 28.726 369 221 12 18 382 167 497 3.95e-23 101
MS.gene54958.t1 MTR_7g007080 27.224 371 227 10 18 382 4 337 4.27e-23 100
MS.gene54958.t1 MTR_3g108560 26.786 392 218 13 14 392 16 351 1.11e-22 99.0
MS.gene54958.t1 MTR_5g073370 28.652 356 211 11 18 370 5 320 3.84e-22 97.4
MS.gene54958.t1 MTR_5g058000 27.792 385 197 12 17 384 7 327 1.07e-21 95.9
MS.gene54958.t1 MTR_5g007410 26.738 374 221 13 20 382 28 359 1.84e-21 95.9
MS.gene54958.t1 MTR_5g058100 27.520 367 227 9 16 382 7 334 2.14e-21 95.1
MS.gene54958.t1 MTR_6g022500 29.255 376 208 14 17 382 100 427 3.74e-21 95.5
MS.gene54958.t1 MTR_3g082890 28.173 394 212 14 13 382 92 438 5.10e-21 95.1
MS.gene54958.t1 MTR_7g055943 29.891 368 198 11 16 372 38 356 6.25e-21 94.4
MS.gene54958.t1 MTR_2g036470 28.232 379 217 14 16 382 12 347 1.21e-20 93.2
MS.gene54958.t1 MTR_3g106960 39.080 174 82 5 213 382 2 155 1.22e-20 90.5
MS.gene54958.t1 MTR_6g044560 28.686 373 198 14 16 370 176 498 4.73e-20 92.4
MS.gene54958.t1 MTR_6g011460 28.610 374 210 11 17 382 45 369 5.91e-20 91.3
MS.gene54958.t1 MTR_1g066830 26.234 385 238 11 14 392 4 348 7.99e-20 90.5
MS.gene54958.t1 MTR_3g467400 25.946 370 217 11 17 382 2 318 1.05e-19 90.1
MS.gene54958.t1 MTR_7g034090 34.375 224 109 8 16 224 2 202 1.13e-19 90.5
MS.gene54958.t1 MTR_3g023630 28.342 374 209 14 17 382 7 329 1.17e-19 90.1
MS.gene54958.t1 MTR_6g044572 28.495 372 198 14 17 370 1 322 1.45e-19 90.1
MS.gene54958.t1 MTR_6g029350 38.596 171 74 6 205 373 1 142 3.73e-19 86.3
MS.gene54958.t1 MTR_5g084070 27.160 405 212 15 17 379 12 375 3.78e-19 89.0
MS.gene54958.t1 MTR_2g007610 48.889 90 45 1 293 382 19 107 4.79e-19 84.3
MS.gene54958.t1 MTR_8g077460 29.032 372 203 15 18 382 10 327 5.61e-19 88.2
MS.gene54958.t1 MTR_8g445780 31.481 216 131 8 18 233 13 211 8.70e-19 87.8
MS.gene54958.t1 MTR_7g056447 33.000 200 114 5 15 214 6 185 1.83e-18 85.5
MS.gene54958.t1 MTR_5g045510 26.542 373 213 13 14 382 8 323 2.08e-18 86.3
MS.gene54958.t1 MTR_7g060470 26.234 385 205 13 18 373 3 337 2.18e-18 86.7
MS.gene54958.t1 MTR_7g056277 27.467 375 208 16 18 382 259 579 2.71e-18 87.0
MS.gene54958.t1 MTR_8g062010 27.654 405 225 19 16 382 7 381 2.88e-18 86.7
MS.gene54958.t1 MTR_8g014260 27.139 409 232 16 18 382 16 402 4.54e-18 85.9
MS.gene54958.t1 MTR_4g039440 28.974 390 212 18 17 392 33 371 8.64e-18 84.7
MS.gene54958.t1 MTR_1g108820 29.518 332 190 13 15 337 5 301 1.08e-17 84.0
MS.gene54958.t1 MTR_5g061680 27.344 384 200 14 16 393 9 319 1.43e-17 83.2
MS.gene54958.t1 MTR_3g110010 33.636 220 119 7 1 220 1 193 1.72e-17 84.7
MS.gene54958.t1 MTR_3g109982 33.636 220 119 7 1 220 1 193 2.16e-17 84.7
MS.gene54958.t1 MTR_8g467800 25.342 438 240 14 2 384 4 409 2.43e-17 84.0
MS.gene54958.t1 MTR_5g031970 26.371 383 197 13 8 384 6 309 4.22e-17 82.4
MS.gene54958.t1 MTR_7g056280 32.941 170 103 5 20 189 8 166 6.41e-17 82.8
MS.gene54958.t1 MTR_7g056280 30.220 182 100 7 206 380 367 528 3.18e-13 71.6
MS.gene54958.t1 MTR_2g007460 36.434 129 62 2 7 135 1 109 6.42e-17 76.6
MS.gene54958.t1 MTR_7g056287 26.613 372 215 14 18 382 3 323 1.50e-16 80.9
MS.gene54958.t1 MTR_6g022360 29.891 368 206 13 17 382 42 359 2.69e-16 80.5
MS.gene54958.t1 MTR_3g082890 26.168 428 214 14 13 382 12 395 2.77e-16 80.5
MS.gene54958.t1 MTR_7g114710 27.394 376 180 17 15 373 10 309 3.00e-16 79.7
MS.gene54958.t1 MTR_1g013560 28.251 223 143 6 2 221 3 211 3.50e-16 79.3
MS.gene54958.t1 MTR_4g134150 28.241 216 127 7 15 229 11 199 4.73e-16 77.4
MS.gene54958.t1 MTR_1g013560 28.251 223 143 6 2 221 3 211 6.39e-16 79.3
MS.gene54958.t1 MTR_8g469020 25.721 416 246 15 14 382 3 402 7.64e-16 79.3
MS.gene54958.t1 MTR_3g108560 26.444 329 179 10 14 330 16 293 9.65e-16 77.8
MS.gene54958.t1 MTR_8g058965 30.047 213 128 5 16 216 11 214 1.07e-15 79.0
MS.gene54958.t1 MTR_1g085120 27.900 319 195 11 18 332 179 466 1.22e-15 78.6
MS.gene54958.t1 MTR_3g087260 33.333 216 108 6 18 233 12 191 1.96e-15 78.2
MS.gene54958.t1 MTR_1g038710 25.000 424 228 17 18 382 19 411 2.36e-15 77.8
MS.gene54958.t1 MTR_7g034110 29.032 248 149 8 15 256 8 234 2.84e-15 76.6
MS.gene54958.t1 MTR_5g080710 26.485 404 224 15 17 380 32 402 4.19e-15 77.0
MS.gene54958.t1 MTR_3g450920 39.535 172 75 8 64 235 59 201 9.00e-15 73.6
MS.gene54958.t1 MTR_8g468760 25.840 387 242 13 16 381 7 369 1.20e-14 75.5
MS.gene54958.t1 MTR_8g062270 24.083 436 221 15 16 382 14 408 1.67e-14 75.1
MS.gene54958.t1 MTR_2g008300 54.545 66 30 0 162 227 4 69 1.80e-14 68.2
MS.gene54958.t1 MTR_4g080590 26.650 409 224 15 18 380 23 401 1.97e-14 75.1
MS.gene54958.t1 MTR_8g467800 28.631 241 156 6 2 241 4 229 2.55e-14 73.9
MS.gene54958.t1 MTR_7g056020 26.440 382 192 14 18 382 16 325 5.35e-14 73.9
MS.gene54958.t1 MTR_7g033470 37.815 119 66 4 9 121 5 121 5.76e-14 69.3
MS.gene54958.t1 MTR_0009s0080 28.421 380 211 16 20 384 20 353 1.32e-13 72.4
MS.gene54958.t1 MTR_8g062310 30.493 223 128 9 2 222 9 206 1.78e-13 72.0
MS.gene54958.t1 MTR_7g022105 26.536 407 208 16 2 382 36 377 1.95e-13 71.6
MS.gene54958.t1 MTR_5g039950 26.343 391 216 11 18 380 23 369 2.88e-13 71.2
MS.gene54958.t1 MTR_2g082850 35.915 142 73 7 2 138 11 139 2.92e-13 70.9
MS.gene54958.t1 MTR_7g033945 33.333 123 68 3 15 135 8 118 3.52e-13 67.8
MS.gene54958.t1 MTR_2g082800 29.609 179 94 5 2 172 11 165 3.90e-13 70.9
MS.gene54958.t1 MTR_1g108800 27.749 382 169 14 15 382 5 293 5.28e-13 70.1
MS.gene54958.t1 MTR_2g082880 30.088 226 119 11 18 234 10 205 7.70e-13 70.1
MS.gene54958.t1 MTR_8g014160 28.794 257 137 11 18 256 41 269 7.71e-13 70.1
MS.gene54958.t1 MTR_5g039470 26.359 368 218 14 35 392 2 326 1.46e-12 68.6
MS.gene54958.t1 MTR_5g092960 24.299 428 239 17 16 384 17 418 2.36e-12 68.6
MS.gene54958.t1 MTR_7g034120 27.437 277 153 12 116 382 26 264 2.56e-12 67.4
MS.gene54958.t1 MTR_8g058970 24.941 425 244 15 17 382 18 426 2.81e-12 68.6
MS.gene54958.t1 MTR_5g039490 24.311 399 227 15 2 392 7 338 2.95e-12 67.8
MS.gene54958.t1 MTR_5g039450 26.301 365 186 14 17 365 5 302 2.99e-12 67.8
MS.gene54958.t1 MTR_1g492880 44.681 94 47 3 18 110 6 95 3.12e-12 62.8
MS.gene54958.t1 MTR_1g492880 44.681 94 47 3 18 110 6 95 4.07e-12 62.8
MS.gene54958.t1 MTR_2g082860 39.806 103 53 3 2 95 11 113 7.40e-12 62.4
MS.gene54958.t1 MTR_2g047858 26.316 266 160 10 5 253 101 347 7.85e-12 67.0
MS.gene54958.t1 MTR_2g091145 24.631 406 263 15 2 382 5 392 1.08e-11 66.6
MS.gene54958.t1 MTR_4g032730 30.275 218 125 10 17 223 14 215 3.00e-11 65.1
MS.gene54958.t1 MTR_3g113782 60.000 55 16 1 18 66 17 71 3.51e-11 59.7
MS.gene54958.t1 MTR_3g095600 28.390 236 130 7 16 251 2 198 4.50e-11 63.5
MS.gene54958.t1 MTR_5g092960 27.876 226 140 8 16 234 17 226 4.52e-11 64.3
MS.gene54958.t1 MTR_6g018660 28.497 193 121 5 16 202 18 199 5.42e-11 63.9
MS.gene54958.t1 MTR_6g022520 28.620 297 160 11 95 382 11 264 5.58e-11 63.5
MS.gene54958.t1 MTR_1g013580 27.854 219 139 7 2 216 3 206 7.16e-11 63.9
MS.gene54958.t1 MTR_5g021550 31.210 157 86 5 18 165 19 162 7.97e-11 60.8
MS.gene54958.t1 MTR_1g014450 27.004 237 144 8 18 241 16 236 9.88e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54958.t1 AT1G16930 35.242 227 121 9 18 241 15 218 4.07e-24 103
MS.gene54958.t1 AT1G16930 35.242 227 121 9 18 241 15 218 4.07e-24 103
MS.gene54958.t1 AT1G16930 35.242 227 121 9 18 241 15 218 4.07e-24 103
MS.gene54958.t1 AT4G00160 27.461 386 227 13 18 373 16 378 3.07e-20 92.4
MS.gene54958.t1 AT4G13985 30.667 225 139 9 3 224 5 215 4.08e-20 92.0
MS.gene54958.t1 AT5G56420 26.146 371 223 11 18 361 6 352 1.04e-19 90.9
MS.gene54958.t1 AT5G56420 26.146 371 223 11 18 361 6 352 1.04e-19 90.9
MS.gene54958.t1 AT5G56420 26.146 371 223 11 18 361 6 352 1.04e-19 90.9
MS.gene54958.t1 AT1G69630 25.197 381 206 15 17 343 17 372 7.98e-19 88.2
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 8.64e-19 86.7
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.21e-18 87.0
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.21e-18 87.0
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.77e-18 87.0
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.77e-18 87.0
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.77e-18 87.0
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 1.77e-18 87.0
MS.gene54958.t1 AT1G32375 26.884 398 229 13 17 379 1 371 2.19e-18 86.7
MS.gene54958.t1 AT1G32375 26.884 398 229 13 17 379 1 371 2.19e-18 86.7
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 21 211 2.24e-18 86.7
MS.gene54958.t1 AT5G56370 27.062 388 231 12 17 379 1 361 2.50e-18 86.7
MS.gene54958.t1 AT5G56370 27.062 388 231 12 17 379 1 361 2.50e-18 86.7
MS.gene54958.t1 AT1G06630 35.437 206 111 8 18 216 12 202 4.00e-18 86.3
MS.gene54958.t1 AT4G26340 27.154 383 208 16 17 361 1 350 1.08e-17 84.7
MS.gene54958.t1 AT4G14103 31.034 261 148 7 18 273 8 241 4.10e-17 82.8
MS.gene54958.t1 AT4G14103 31.034 261 148 7 18 273 8 241 4.10e-17 82.8
MS.gene54958.t1 AT4G14103 30.651 261 149 7 18 273 8 241 7.97e-17 82.4
MS.gene54958.t1 AT1G78750 32.468 231 118 10 17 231 17 225 1.74e-16 81.3
MS.gene54958.t1 AT1G78750 32.468 231 118 10 17 231 17 225 1.74e-16 81.3
MS.gene54958.t1 AT3G59210 31.140 228 137 6 18 241 7 218 1.90e-16 81.3
MS.gene54958.t1 AT3G59210 31.140 228 137 6 18 241 7 218 1.90e-16 81.3
MS.gene54958.t1 AT3G59210 31.140 228 137 6 18 241 7 218 1.90e-16 81.3
MS.gene54958.t1 AT3G59210 31.140 228 137 6 18 241 7 218 1.90e-16 81.3
MS.gene54958.t1 AT3G59210 31.140 228 137 6 18 241 7 218 1.90e-16 81.3
MS.gene54958.t1 AT4G13965 25.474 369 225 10 18 361 10 353 2.59e-16 80.5
MS.gene54958.t1 AT3G58860 25.419 358 205 12 17 332 6 343 3.57e-16 80.5
MS.gene54958.t1 AT5G60610 26.992 389 210 16 17 366 1 354 3.88e-16 79.7
MS.gene54958.t1 AT5G60610 26.992 389 210 16 17 366 1 354 3.88e-16 79.7
MS.gene54958.t1 AT3G50710 25.521 384 231 12 17 367 1 362 3.95e-16 80.1
MS.gene54958.t1 AT4G26350 25.735 408 227 15 17 379 1 377 5.70e-16 79.7
MS.gene54958.t1 AT1G51370 24.485 388 219 14 18 366 19 371 7.18e-16 79.3
MS.gene54958.t1 AT1G51370 24.485 388 219 14 18 366 19 371 9.93e-16 79.0
MS.gene54958.t1 AT3G58920 27.055 292 176 9 17 282 1 281 1.37e-15 78.6
MS.gene54958.t1 AT5G22660 29.339 242 134 7 18 253 13 223 1.95e-15 78.2
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.12e-15 77.0
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.12e-15 77.0
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.42e-15 77.0
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.42e-15 77.0
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.42e-15 77.0
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 5 181 2.42e-15 77.0
MS.gene54958.t1 AT3G59200 30.172 232 134 7 18 241 7 218 2.60e-15 77.8
MS.gene54958.t1 AT1G51370 26.038 265 157 7 18 282 19 244 3.11e-15 76.6
MS.gene54958.t1 AT5G22660 29.339 242 134 7 18 253 13 223 3.24e-15 76.3
MS.gene54958.t1 AT2G29910 32.000 200 112 7 18 216 29 205 3.40e-15 77.0
MS.gene54958.t1 AT3G60040 28.832 274 141 12 18 253 13 270 3.48e-15 77.8
MS.gene54958.t1 AT3G26922 32.203 236 125 9 18 248 14 219 4.03e-15 75.9
MS.gene54958.t1 AT3G26922 32.203 236 125 9 18 248 14 219 4.03e-15 75.9
MS.gene54958.t1 AT5G22720 29.032 217 134 6 18 234 23 219 4.54e-15 77.0
MS.gene54958.t1 AT5G56380 31.000 200 126 5 17 216 1 188 5.35e-15 76.6
MS.gene54958.t1 AT5G56380 31.000 200 126 5 17 216 1 188 5.35e-15 76.6
MS.gene54958.t1 AT3G59200 30.172 232 134 7 18 241 7 218 5.88e-15 76.3
MS.gene54958.t1 AT3G60040 28.832 274 141 12 18 253 232 489 6.88e-15 77.0
MS.gene54958.t1 AT3G60040 28.832 274 141 12 18 253 233 490 7.07e-15 77.0
MS.gene54958.t1 AT3G60040 28.832 274 141 12 18 253 232 489 7.52e-15 76.6
MS.gene54958.t1 AT3G60040 28.832 274 141 12 18 253 230 487 7.99e-15 76.6
MS.gene54958.t1 AT5G56370 27.246 345 200 11 17 336 1 319 8.51e-15 75.1
MS.gene54958.t1 AT3G44060 31.343 201 116 7 20 216 1 183 8.91e-15 75.9
MS.gene54958.t1 AT3G42770 32.692 208 110 8 20 216 1 189 1.08e-14 75.9
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 43 261 1.31e-14 75.5
MS.gene54958.t1 AT1G60400 25.344 363 209 13 16 336 12 354 1.90e-14 74.7
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 43 261 2.11e-14 75.1
MS.gene54958.t1 AT4G27050 30.137 219 112 7 18 216 4 201 2.26e-14 74.7
MS.gene54958.t1 AT4G27050 30.137 219 112 7 18 216 4 201 2.26e-14 74.7
MS.gene54958.t1 AT4G27050 30.137 219 112 7 18 216 4 201 2.26e-14 74.7
MS.gene54958.t1 AT4G27050 30.137 219 112 7 18 216 4 201 2.26e-14 74.7
MS.gene54958.t1 AT4G27050 30.137 219 112 7 18 216 4 201 2.26e-14 74.7
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 6 224 2.29e-14 74.7
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 6 224 2.29e-14 74.7
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 6 224 2.29e-14 74.7
MS.gene54958.t1 AT5G22700 29.150 247 135 7 18 252 6 224 2.29e-14 74.7
MS.gene54958.t1 AT4G10400 25.575 391 223 17 17 375 1 355 2.78e-14 74.3
MS.gene54958.t1 AT4G10400 25.575 391 223 17 17 375 1 355 2.78e-14 74.3
MS.gene54958.t1 AT4G10400 25.575 391 223 17 17 375 1 355 2.78e-14 74.3
MS.gene54958.t1 AT5G41830 31.884 207 122 7 18 216 13 208 3.22e-14 74.7
MS.gene54958.t1 AT2G26860 24.227 388 234 11 17 367 1 365 3.28e-14 73.9
MS.gene54958.t1 AT2G26860 24.227 388 234 11 17 367 1 365 3.28e-14 73.9
MS.gene54958.t1 AT5G53640 26.906 223 135 8 1 219 1 199 4.38e-14 71.6
MS.gene54958.t1 AT2G04230 32.489 237 136 11 18 251 13 228 5.66e-14 73.6
MS.gene54958.t1 AT3G58880 26.431 367 198 12 17 330 2 349 5.87e-14 73.6
MS.gene54958.t1 AT5G02930 29.902 204 112 7 16 217 26 200 6.11e-14 73.6
MS.gene54958.t1 AT3G44810 31.132 212 107 8 20 216 9 196 6.43e-14 73.6
MS.gene54958.t1 AT5G44980 31.222 221 111 8 18 224 4 197 6.94e-14 73.2
MS.gene54958.t1 AT5G44980 31.222 221 111 8 18 224 4 197 6.94e-14 73.2
MS.gene54958.t1 AT5G44980 32.127 221 109 9 18 224 4 197 8.07e-14 72.0
MS.gene54958.t1 AT5G44980 32.127 221 109 9 18 224 4 197 8.07e-14 72.0
MS.gene54958.t1 AT5G53840 29.208 202 120 5 18 219 18 196 8.56e-14 73.2
MS.gene54958.t1 AT5G56820 25.065 383 230 11 18 375 15 365 1.10e-13 72.8
MS.gene54958.t1 AT5G41840 29.778 225 134 7 1 216 1 210 1.55e-13 72.4
MS.gene54958.t1 AT4G14096 25.348 359 201 11 18 330 8 345 2.00e-13 72.0
MS.gene54958.t1 AT4G14096 25.348 359 201 11 18 330 8 345 2.00e-13 72.0
MS.gene54958.t1 AT1G66320 24.011 379 195 14 23 341 35 380 2.48e-13 71.6
MS.gene54958.t1 AT3G52680 26.562 384 231 14 18 373 21 381 2.81e-13 71.6
MS.gene54958.t1 AT5G56440 30.583 206 113 5 17 216 1 182 3.67e-13 70.9
MS.gene54958.t1 AT2G26030 28.194 227 137 8 18 241 4 207 4.77e-13 70.9
MS.gene54958.t1 AT2G26030 28.194 227 137 8 18 241 4 207 4.77e-13 70.9
MS.gene54958.t1 AT5G22730 28.230 209 131 4 8 216 18 207 4.99e-13 70.9
MS.gene54958.t1 AT5G22730 28.230 209 131 4 8 216 18 207 4.99e-13 70.9
MS.gene54958.t1 AT2G26030 28.194 227 137 8 18 241 4 207 5.29e-13 70.5
MS.gene54958.t1 AT1G78760 25.000 312 179 11 2 295 8 282 5.71e-13 70.5
MS.gene54958.t1 AT5G22730 28.230 209 131 4 8 216 18 207 6.56e-13 70.1
MS.gene54958.t1 AT3G59190 28.926 242 135 8 18 249 12 226 7.49e-13 69.7
MS.gene54958.t1 AT3G59190 28.926 242 135 8 18 249 12 226 9.93e-13 70.1
MS.gene54958.t1 AT3G49030 27.200 375 215 16 18 361 21 368 1.04e-12 69.7
MS.gene54958.t1 AT2G29930 31.863 204 107 8 18 216 12 188 1.42e-12 69.3
MS.gene54958.t1 AT2G29930 31.863 204 107 8 18 216 12 188 1.42e-12 69.3
MS.gene54958.t1 AT5G56410 31.579 209 126 8 17 216 1 201 1.74e-12 69.3
MS.gene54958.t1 AT1G55660 31.373 204 118 8 17 216 52 237 1.89e-12 68.9
MS.gene54958.t1 AT5G62970 25.505 396 237 15 17 366 1 384 2.05e-12 68.9
MS.gene54958.t1 AT3G58900 26.133 375 197 14 17 330 1 356 2.19e-12 68.9
MS.gene54958.t1 AT4G00320 29.493 217 114 8 18 216 13 208 2.38e-12 68.9
MS.gene54958.t1 AT5G35995 32.212 208 113 8 18 221 5 188 2.38e-12 68.6
MS.gene54958.t1 AT5G35995 32.212 208 113 8 18 221 5 188 2.38e-12 68.6
MS.gene54958.t1 AT1G66290 26.991 226 124 7 3 216 7 203 2.55e-12 68.6
MS.gene54958.t1 AT3G49040 29.961 257 135 11 18 263 17 239 2.66e-12 67.8
MS.gene54958.t1 AT1G55660 30.882 204 119 8 17 216 52 237 2.66e-12 68.2
MS.gene54958.t1 AT5G44940 30.415 217 107 9 18 219 5 192 2.68e-12 68.2
MS.gene54958.t1 AT5G38390 30.131 229 129 9 17 241 1 202 4.24e-12 67.8
MS.gene54958.t1 AT5G53635 26.522 230 137 9 20 245 2 203 5.32e-12 67.4
MS.gene54958.t1 AT5G27750 27.273 242 136 8 15 241 2 218 6.15e-12 67.0
MS.gene54958.t1 AT4G15060 27.897 233 137 8 17 241 25 234 6.20e-12 67.4
MS.gene54958.t1 AT4G15060 27.897 233 137 8 17 241 171 380 8.74e-12 67.0
MS.gene54958.t1 AT5G27750 27.273 242 136 8 15 241 2 218 8.75e-12 67.0
MS.gene54958.t1 AT4G22280 29.825 228 128 9 17 236 1 204 1.04e-11 66.6
MS.gene54958.t1 AT1G13780 28.862 246 130 14 15 245 7 222 1.66e-11 65.9
MS.gene54958.t1 AT1G48400 31.731 208 111 9 18 216 10 195 1.66e-11 66.2
MS.gene54958.t1 AT4G22280 29.825 228 128 9 17 236 1 204 1.76e-11 65.5
MS.gene54958.t1 AT5G22670 28.856 201 121 6 18 218 11 189 1.79e-11 65.9
MS.gene54958.t1 AT2G42730 30.660 212 117 9 16 216 3 195 1.85e-11 65.9
MS.gene54958.t1 AT1G48400 31.250 208 112 9 18 216 10 195 2.14e-11 65.9
MS.gene54958.t1 AT1G80470 25.061 407 202 19 18 366 15 376 2.28e-11 65.5
MS.gene54958.t1 AT1G13780 28.862 246 130 14 15 245 7 222 2.55e-11 64.7
MS.gene54958.t1 AT5G56690 29.557 203 122 10 19 217 3 188 2.83e-11 65.1
MS.gene54958.t1 AT3G58900 31.553 206 117 7 17 216 1 188 3.20e-11 64.3
MS.gene54958.t1 AT3G44080 31.875 160 90 6 14 169 6 150 3.45e-11 64.7
MS.gene54958.t1 AT3G58900 31.553 206 117 7 17 216 1 188 3.71e-11 64.3
MS.gene54958.t1 AT3G58900 31.553 206 117 7 17 216 1 188 3.71e-11 64.3
MS.gene54958.t1 AT5G25850 28.000 200 120 6 17 216 19 194 4.00e-11 65.1
MS.gene54958.t1 AT4G09920 26.786 224 130 9 17 233 1 197 4.31e-11 63.9
MS.gene54958.t1 AT4G09920 26.786 224 130 9 17 233 1 197 4.31e-11 63.9
MS.gene54958.t1 AT5G44490 28.444 225 128 8 1 219 5 202 4.49e-11 64.7
MS.gene54958.t1 AT5G44490 28.444 225 128 8 1 219 5 202 4.63e-11 64.7
MS.gene54958.t1 AT5G22610 30.531 226 130 9 18 233 18 226 4.70e-11 64.7
MS.gene54958.t1 AT5G22610 31.884 207 121 8 18 221 18 207 5.05e-11 64.7
MS.gene54958.t1 AT5G44950 30.088 226 130 9 18 237 4 207 6.30e-11 64.3
MS.gene54958.t1 AT4G09920 26.991 226 127 9 17 233 1 197 7.25e-11 63.2
MS.gene54958.t1 AT4G09920 26.991 226 127 9 17 233 1 197 7.25e-11 63.2
MS.gene54958.t1 AT4G09920 26.991 226 127 9 17 233 1 197 7.25e-11 63.2
MS.gene54958.t1 AT3G51530 27.751 209 127 5 8 216 20 204 7.49e-11 63.9
MS.gene54958.t1 AT3G62440 27.232 224 129 7 17 224 1 206 7.93e-11 63.9
MS.gene54958.t1 AT3G59240 27.755 245 139 9 18 252 8 224 8.80e-11 63.9
MS.gene54958.t1 AT3G49020 26.842 380 210 17 18 361 22 369 9.12e-11 63.5

Find 95 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACATAAGCTCGCTTTCT+AGG 0.183684 7.2:+23611242 None:intergenic
TGATTCTATGTACTCCATTT+TGG 0.227664 7.2:-23612491 MS.gene54958:CDS
AAGAAGGTGGTCAAGAAAAT+TGG 0.231711 7.2:-23611336 MS.gene54958:CDS
GAGAATACCAATAGGCAATT+TGG 0.240884 7.2:+23612273 None:intergenic
CAATAGGCAATTTGGGTAAT+TGG 0.252132 7.2:+23612281 None:intergenic
GATATCAACAGTGGTCAATT+TGG 0.274963 7.2:+23611997 None:intergenic
GACATCTTTATAGTTAATTC+AGG 0.287329 7.2:-23611602 MS.gene54958:intron
GCTTGTGGCAACTGCCTCTT+TGG 0.307775 7.2:+23612612 None:intergenic
ATGGTGGGCTTCATGGTTTC+CGG 0.311917 7.2:-23611969 MS.gene54958:CDS
AAAGGTCATCCACACGGATA+TGG 0.316697 7.2:+23612317 None:intergenic
ACTTGGAGCTACATGATAAC+TGG 0.325193 7.2:-23611531 MS.gene54958:CDS
ACTGATCTTGCCTTTCGTTT+CGG 0.339332 7.2:-23612403 MS.gene54958:CDS
TCACTGAATGGTGGGCTTCA+TGG 0.353909 7.2:-23611976 MS.gene54958:CDS
AGGCTTTGTGGAACAAGTTC+TGG 0.374555 7.2:+23611307 None:intergenic
AGTTCGAGACTTTGAAGCTT+AGG 0.375197 7.2:+23611478 None:intergenic
ATTTCATAATTTGACCTACT+TGG 0.379587 7.2:-23611548 MS.gene54958:CDS
CAATTACCCAAATTGCCTAT+TGG 0.385188 7.2:-23612280 MS.gene54958:CDS
ATTGGTCGTCATTATCATAA+AGG 0.385540 7.2:+23612299 None:intergenic
CAAGCACATATGCTTCGAAT+TGG 0.388766 7.2:+23611934 None:intergenic
AGAATACCAATAGGCAATTT+GGG 0.389106 7.2:+23612274 None:intergenic
TATCCTTCAATTGAGTGATA+TGG 0.393426 7.2:-23612158 MS.gene54958:CDS
CAAAGAGATGGACTCATCTC+TGG 0.411250 7.2:-23612582 MS.gene54958:CDS
AATATCAGAGTACCATTGTA+AGG 0.432750 7.2:+23611568 None:intergenic
ATATCAACAGTGGTCAATTT+GGG 0.433887 7.2:+23611998 None:intergenic
GGCTTCACGAGGGACCAAAA+TGG 0.443251 7.2:+23612477 None:intergenic
GCATTCACAATGTCAACAAA+TGG 0.443430 7.2:-23612381 MS.gene54958:CDS
TGTTACCGTATTCAATTTCA+AGG 0.453400 7.2:+23612425 None:intergenic
GTTCGAGACTTTGAAGCTTA+GGG 0.455415 7.2:+23611479 None:intergenic
TTCACCCTTGAAATTGAATA+CGG 0.456828 7.2:-23612430 MS.gene54958:CDS
AGAAGGTGGTCAAGAAAATT+GGG 0.457655 7.2:-23611335 MS.gene54958:CDS
TGATGTCGGTGAATTCGATA+TGG 0.471647 7.2:+23612548 None:intergenic
ATCTTATCCACCGCTGGTGG+TGG 0.483228 7.2:+23612685 None:intergenic
CAGATTTGATGCGCAACCAC+AGG 0.485118 7.2:-23610838 MS.gene54958:CDS
TCAAAGTCTCGAACTTTACC+AGG 0.487897 7.2:-23611470 MS.gene54958:intron
ATCTGACTCAGAATCGCGTC+AGG 0.492677 7.2:+23612652 None:intergenic
GCTCCTAGATGCTCAAGATT+CGG 0.505158 7.2:+23612091 None:intergenic
TTTGAAGCTTAGGGCAGCAA+TGG 0.508430 7.2:+23611488 None:intergenic
TTATCCACCGCTGGTGGTGG+TGG 0.512107 7.2:+23612688 None:intergenic
AGACCATATCACTCAATTGA+AGG 0.514718 7.2:+23612155 None:intergenic
AGATATGATGACAGGCTTTG+TGG 0.519911 7.2:+23611295 None:intergenic
TGTCCGAATCTTGAGCATCT+AGG 0.520631 7.2:-23612094 MS.gene54958:CDS
CCTCCGTCGCTTCCAAGTGA+AGG 0.530983 7.2:-23612224 MS.gene54958:CDS
AACCCTTCACTTGGAAGCGA+CGG 0.541950 7.2:+23612221 None:intergenic
CTGCTGATCTTATCCACCGC+TGG 0.548082 7.2:+23612679 None:intergenic
AGATTTGATGCGCAACCACA+GGG 0.553449 7.2:-23610837 MS.gene54958:CDS
ATTCATATGACGCAAGGAGG+AGG 0.554718 7.2:-23611363 MS.gene54958:CDS
GAATTGGAAAGTGCTTTCAC+CGG 0.555034 7.2:+23611950 None:intergenic
AAGAAGAAGCAATGCGTCGA+CGG 0.555778 7.2:-23612732 None:intergenic
CTCCGTCGCTTCCAAGTGAA+GGG 0.556260 7.2:-23612223 MS.gene54958:CDS
ATTAACCTTGTTGTTCAACA+TGG 0.562608 7.2:-23612358 MS.gene54958:CDS
TTTCAAGGGTGAATCTGTTG+AGG 0.564888 7.2:+23612440 None:intergenic
GTTGAGGAAATGAGAGGCAG+AGG 0.567273 7.2:+23612456 None:intergenic
CAAGCATTCTGTCAAAGAGA+TGG 0.573974 7.2:-23612594 MS.gene54958:CDS
TCTCTTTGACAGAATGCTTG+TGG 0.575936 7.2:+23612597 None:intergenic
GCTACATGATAACTGGGAGT+TGG 0.576273 7.2:-23611524 MS.gene54958:CDS
CTTGGAGCTACATGATAACT+GGG 0.577748 7.2:-23611530 MS.gene54958:CDS
AAATTCTGAGATATGATGAC+AGG 0.585974 7.2:+23611287 None:intergenic
GCAAGGAGGAGGAATGAAGA+AGG 0.589392 7.2:-23611352 MS.gene54958:CDS
AAGAAGCAATGCGTCGACGG+AGG 0.592967 7.2:-23612729 None:intergenic
TGTTGATATCACTGAATGGT+GGG 0.593561 7.2:-23611984 MS.gene54958:CDS
GTTACCGTATTCAATTTCAA+GGG 0.594702 7.2:+23612426 None:intergenic
GTCTCGTCTCTCTACCAAAG+AGG 0.599949 7.2:-23612626 MS.gene54958:CDS
GTTATCATGTAGCTCCAAGT+AGG 0.601876 7.2:+23611534 None:intergenic
CTGTTGATATCACTGAATGG+TGG 0.604836 7.2:-23611985 MS.gene54958:CDS
CCTTCACTTGGAAGCGACGG+AGG 0.608979 7.2:+23612224 None:intergenic
GTGCATGTGAGAATACCAAT+AGG 0.613803 7.2:+23612265 None:intergenic
AATAGGATTCATATGACGCA+AGG 0.616914 7.2:-23611369 MS.gene54958:intron
GTGCCACAACGCCCTTACAA+TGG 0.617224 7.2:-23611580 MS.gene54958:CDS
GTCGGTGAATTCGATATGGT+CGG 0.618068 7.2:+23612552 None:intergenic
AGCAACACCACCACCACCAG+CGG 0.618226 7.2:-23612695 MS.gene54958:CDS
ATATCAGAGTACCATTGTAA+GGG 0.621117 7.2:+23611569 None:intergenic
CGATGGAAATCCAAATCCAA+CGG 0.622924 7.2:+23612186 None:intergenic
GAGAATCTACTTCCTCACAA+TGG 0.632666 7.2:+23612053 None:intergenic
GTACCATTGTAAGGGCGTTG+TGG 0.634346 7.2:+23611577 None:intergenic
CCACTGTTGATATCACTGAA+TGG 0.636193 7.2:-23611988 MS.gene54958:CDS
AATTGAAGGATATTGAGCGA+TGG 0.636407 7.2:+23612169 None:intergenic
ATTTGATGCGCAACCACAGG+GGG 0.636676 7.2:-23610835 MS.gene54958:CDS
AACACCACCACCACCAGCGG+TGG 0.639768 7.2:-23612692 MS.gene54958:CDS
CTGATCTTATCCACCGCTGG+TGG 0.645294 7.2:+23612682 None:intergenic
AATGTCATTCAGTGTGATGT+CGG 0.646344 7.2:+23612534 None:intergenic
TGAGAGGCAGAGGCTTCACG+AGG 0.647111 7.2:+23612466 None:intergenic
ATTGTGAATGCCGAAACGAA+AGG 0.648719 7.2:+23612393 None:intergenic
AGATATACACTTCCATTGTG+AGG 0.654042 7.2:-23612065 MS.gene54958:CDS
TGAGTCCATGTTGAACAACA+AGG 0.658068 7.2:+23612353 None:intergenic
GAATCTGTTGAGGAAATGAG+AGG 0.666443 7.2:+23612450 None:intergenic
TATCATAAAGGTCATCCACA+CGG 0.682482 7.2:+23612311 None:intergenic
AGGAGGAGGAATGAAGAAGG+TGG 0.685851 7.2:-23611349 MS.gene54958:CDS
AGGTGGTCAAGAAAATTGGG+TGG 0.689195 7.2:-23611332 MS.gene54958:CDS
AGGATTCATATGACGCAAGG+AGG 0.689310 7.2:-23611366 MS.gene54958:CDS
GAATCTTGAGCATCTAGGAG+CGG 0.701616 7.2:-23612089 MS.gene54958:CDS
GATTTGATGCGCAACCACAG+GGG 0.701884 7.2:-23610836 MS.gene54958:CDS
TCTTTCTCTCCATATCCGTG+TGG 0.705660 7.2:-23612326 MS.gene54958:CDS
CCATTCAGTGATATCAACAG+TGG 0.707785 7.2:+23611988 None:intergenic
CAAAATCTACAAGCTCTACG+AGG 0.717272 7.2:-23611882 MS.gene54958:intron
GAGAGGCAGAGGCTTCACGA+GGG 0.742216 7.2:+23612467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATAAAATTCAACATAA+AGG + chr7.2:23612141-23612160 None:intergenic 15.0%
!! AAAAAAGAATTATTGAACAC+GGG + chr7.2:23611814-23611833 None:intergenic 20.0%
!! AACAGTTTCAATAAATAAAC+AGG + chr7.2:23612625-23612644 None:intergenic 20.0%
!! GAAAAAAGAATTATTGAACA+CGG + chr7.2:23611815-23611834 None:intergenic 20.0%
!! TAACATATAGATTGTGTAAA+TGG - chr7.2:23612454-23612473 MS.gene54958:CDS 20.0%
!! TATTTAGTTGTTTGAACTAT+GGG - chr7.2:23612513-23612532 MS.gene54958:CDS 20.0%
!! TTATGACTTCAATTACATTA+AGG - chr7.2:23612644-23612663 MS.gene54958:CDS 20.0%
!! TTTCAATAAATAAACAGGTA+AGG + chr7.2:23612620-23612639 None:intergenic 20.0%
!!! TTATTTTGTGTCCTATTAAT+AGG - chr7.2:23612153-23612172 MS.gene54958:CDS 20.0%
! AACTATAAAGATGTCAAGTT+AGG + chr7.2:23611932-23611951 None:intergenic 25.0%
! ACACCTTAAATATGAAATGT+CGG + chr7.2:23611731-23611750 None:intergenic 25.0%
! ACTATAAAGATGTCAAGTTA+GGG + chr7.2:23611931-23611950 None:intergenic 25.0%
! AGCTAAAAGTTTACTAATCT+TGG - chr7.2:23612339-23612358 MS.gene54958:CDS 25.0%
! ATTTCATAATTTGACCTACT+TGG - chr7.2:23611991-23612010 MS.gene54958:CDS 25.0%
! CTATTTAGTTGTTTGAACTA+TGG - chr7.2:23612512-23612531 MS.gene54958:CDS 25.0%
! GACATCTTTATAGTTAATTC+AGG - chr7.2:23611937-23611956 MS.gene54958:CDS 25.0%
! GTCATATGAATCCTATTAAT+AGG + chr7.2:23612167-23612186 None:intergenic 25.0%
!! ATTAAGGCTTATCCATTTTA+CGG - chr7.2:23612660-23612679 MS.gene54958:CDS 25.0%
!! TAAGCTTTTAAACTCTTGAA+TGG + chr7.2:23611515-23611534 None:intergenic 25.0%
AAAAATCAAAACCCTTCACT+TGG + chr7.2:23611330-23611349 None:intergenic 30.0%
AAATGAATACCATACACTGA+TGG - chr7.2:23611852-23611871 MS.gene54958:intron 30.0%
AGAATACCAATAGGCAATTT+GGG + chr7.2:23611268-23611287 None:intergenic 30.0%
ATATCAACAGTGGTCAATTT+GGG + chr7.2:23611544-23611563 None:intergenic 30.0%
ATTCATAGAATTAGCAAACC+TGG + chr7.2:23612090-23612109 None:intergenic 30.0%
ATTGGTCGTCATTATCATAA+AGG + chr7.2:23611243-23611262 None:intergenic 30.0%
CGTGTTAAGAAAAGATAAAC+AGG + chr7.2:23612118-23612137 None:intergenic 30.0%
GTTACCGTATTCAATTTCAA+GGG + chr7.2:23611116-23611135 None:intergenic 30.0%
GTTTACTAATCTTGGAAATC+TGG - chr7.2:23612347-23612366 MS.gene54958:CDS 30.0%
TAGGCCTAAAAAGTTATGAA+TGG + chr7.2:23612281-23612300 None:intergenic 30.0%
TATCCTTCAATTGAGTGATA+TGG - chr7.2:23611381-23611400 MS.gene54958:intron 30.0%
TCACCGACATTTCATATTTA+AGG - chr7.2:23611725-23611744 MS.gene54958:intron 30.0%
TGGTATTCATTTAACTGACA+TGG + chr7.2:23611844-23611863 None:intergenic 30.0%
TGTTACCGTATTCAATTTCA+AGG + chr7.2:23611117-23611136 None:intergenic 30.0%
TTCACCCTTGAAATTGAATA+CGG - chr7.2:23611109-23611128 MS.gene54958:intron 30.0%
! AATATCAGAGTACCATTGTA+AGG + chr7.2:23611974-23611993 None:intergenic 30.0%
! ATATCAGAGTACCATTGTAA+GGG + chr7.2:23611973-23611992 None:intergenic 30.0%
! TGATTCTATGTACTCCATTT+TGG - chr7.2:23611048-23611067 MS.gene54958:intron 30.0%
! TGCACCATTCATAACTTTTT+AGG - chr7.2:23612274-23612293 MS.gene54958:CDS 30.0%
! TTAAGGCTTATCCATTTTAC+GGG - chr7.2:23612661-23612680 MS.gene54958:CDS 30.0%
!! AAATTCTGAGATATGATGAC+AGG + chr7.2:23612255-23612274 None:intergenic 30.0%
!! ATTAACCTTGTTGTTCAACA+TGG - chr7.2:23611181-23611200 MS.gene54958:intron 30.0%
AAGAAGGTGGTCAAGAAAAT+TGG - chr7.2:23612203-23612222 MS.gene54958:CDS 35.0%
AATACCATACACTGATGGAA+TGG - chr7.2:23611857-23611876 MS.gene54958:intron 35.0%
AATAGGATTCATATGACGCA+AGG - chr7.2:23612170-23612189 MS.gene54958:CDS 35.0%
AATGTCATTCAGTGTGATGT+CGG + chr7.2:23611008-23611027 None:intergenic 35.0%
AATTGAAGGATATTGAGCGA+TGG + chr7.2:23611373-23611392 None:intergenic 35.0%
AGAAGGTGGTCAAGAAAATT+GGG - chr7.2:23612204-23612223 MS.gene54958:CDS 35.0%
AGACCATATCACTCAATTGA+AGG + chr7.2:23611387-23611406 None:intergenic 35.0%
AGATATACACTTCCATTGTG+AGG - chr7.2:23611474-23611493 MS.gene54958:CDS 35.0%
CAATAGGCAATTTGGGTAAT+TGG + chr7.2:23611261-23611280 None:intergenic 35.0%
CAATTACCCAAATTGCCTAT+TGG - chr7.2:23611259-23611278 MS.gene54958:CDS 35.0%
GAGAATACCAATAGGCAATT+TGG + chr7.2:23611269-23611288 None:intergenic 35.0%
GATATCAACAGTGGTCAATT+TGG + chr7.2:23611545-23611564 None:intergenic 35.0%
GCATATAAGTACCCGTAAAA+TGG + chr7.2:23612675-23612694 None:intergenic 35.0%
GCATTCACAATGTCAACAAA+TGG - chr7.2:23611158-23611177 MS.gene54958:intron 35.0%
TAAAAGTTGACATGTTGCAG+AGG + chr7.2:23612425-23612444 None:intergenic 35.0%
TATCATAAAGGTCATCCACA+CGG + chr7.2:23611231-23611250 None:intergenic 35.0%
TGTTGATATCACTGAATGGT+GGG - chr7.2:23611555-23611574 MS.gene54958:CDS 35.0%
TTATTGAACACGGGTAATGT+TGG + chr7.2:23611805-23611824 None:intergenic 35.0%
! GATTTTTCTTCCGTTGGATT+TGG - chr7.2:23611343-23611362 MS.gene54958:CDS 35.0%
!! TCGTGATTTTATGTTGCTTC+TGG - chr7.2:23611417-23611436 MS.gene54958:intron 35.0%
!!! GGTTTTGATTTTTCTTCCGT+TGG - chr7.2:23611337-23611356 MS.gene54958:CDS 35.0%
AAGCTAATGAAACAGCAAGC+AGG + chr7.2:23612492-23612511 None:intergenic 40.0%
ACTGATCTTGCCTTTCGTTT+CGG - chr7.2:23611136-23611155 MS.gene54958:intron 40.0%
ACTTGGAGCTACATGATAAC+TGG - chr7.2:23612008-23612027 MS.gene54958:CDS 40.0%
AGATATGATGACAGGCTTTG+TGG + chr7.2:23612247-23612266 None:intergenic 40.0%
ATTGTGAATGCCGAAACGAA+AGG + chr7.2:23611149-23611168 None:intergenic 40.0%
CAAAATCTACAAGCTCTACG+AGG - chr7.2:23611657-23611676 MS.gene54958:intron 40.0%
CAAGCACATATGCTTCGAAT+TGG + chr7.2:23611608-23611627 None:intergenic 40.0%
CAAGCATTCTGTCAAAGAGA+TGG - chr7.2:23610945-23610964 MS.gene54958:intron 40.0%
CATACACTGATGGAATGGTA+TGG - chr7.2:23611862-23611881 MS.gene54958:intron 40.0%
CATACCATTCCATCAGTGTA+TGG + chr7.2:23611864-23611883 None:intergenic 40.0%
CCACTGTTGATATCACTGAA+TGG - chr7.2:23611551-23611570 MS.gene54958:CDS 40.0%
CCATTCAGTGATATCAACAG+TGG + chr7.2:23611554-23611573 None:intergenic 40.0%
CGATGGAAATCCAAATCCAA+CGG + chr7.2:23611356-23611375 None:intergenic 40.0%
CTAACATAAGCTCGCTTTCT+AGG + chr7.2:23612300-23612319 None:intergenic 40.0%
CTGTTGATATCACTGAATGG+TGG - chr7.2:23611554-23611573 MS.gene54958:CDS 40.0%
CTTGGAGCTACATGATAACT+GGG - chr7.2:23612009-23612028 MS.gene54958:CDS 40.0%
GAATCTGTTGAGGAAATGAG+AGG + chr7.2:23611092-23611111 None:intergenic 40.0%
GAGAATCTACTTCCTCACAA+TGG + chr7.2:23611489-23611508 None:intergenic 40.0%
GTGCATGTGAGAATACCAAT+AGG + chr7.2:23611277-23611296 None:intergenic 40.0%
GTTATCATGTAGCTCCAAGT+AGG + chr7.2:23612008-23612027 None:intergenic 40.0%
TCAAAGTCTCGAACTTTACC+AGG - chr7.2:23612069-23612088 MS.gene54958:CDS 40.0%
TCTCTTTGACAGAATGCTTG+TGG + chr7.2:23610945-23610964 None:intergenic 40.0%
TGAGTCCATGTTGAACAACA+AGG + chr7.2:23611189-23611208 None:intergenic 40.0%
TGATGTCGGTGAATTCGATA+TGG + chr7.2:23610994-23611013 None:intergenic 40.0%
TTGTCTCGCTGCATAAATGA+AGG - chr7.2:23612556-23612575 MS.gene54958:CDS 40.0%
TTTCAAGGGTGAATCTGTTG+AGG + chr7.2:23611102-23611121 None:intergenic 40.0%
! CTTGGAAATCTGGAACCAAA+GGG - chr7.2:23612357-23612376 MS.gene54958:CDS 40.0%
! TCTTGGAAATCTGGAACCAA+AGG - chr7.2:23612356-23612375 MS.gene54958:CDS 40.0%
!! AGTTCGAGACTTTGAAGCTT+AGG + chr7.2:23612064-23612083 None:intergenic 40.0%
!! GAATTGGAAAGTGCTTTCAC+CGG + chr7.2:23611592-23611611 None:intergenic 40.0%
!! GATTTTATGTTGCTTCTGGC+TGG - chr7.2:23611421-23611440 MS.gene54958:intron 40.0%
!! GTTCGAGACTTTGAAGCTTA+GGG + chr7.2:23612063-23612082 None:intergenic 40.0%
AAAGGTCATCCACACGGATA+TGG + chr7.2:23611225-23611244 None:intergenic 45.0%
AAGATTGTCCACATGCCCAA+AGG - chr7.2:23612399-23612418 MS.gene54958:CDS 45.0%
AGATTTGATGCGCAACCACA+GGG - chr7.2:23612702-23612721 MS.gene54958:CDS 45.0%
AGGATTCATATGACGCAAGG+AGG - chr7.2:23612173-23612192 MS.gene54958:CDS 45.0%
AGGTGGTCAAGAAAATTGGG+TGG - chr7.2:23612207-23612226 MS.gene54958:CDS 45.0%
ATTCATATGACGCAAGGAGG+AGG - chr7.2:23612176-23612195 MS.gene54958:CDS 45.0%
GAATCTTGAGCATCTAGGAG+CGG - chr7.2:23611450-23611469 MS.gene54958:intron 45.0%
GCTACATGATAACTGGGAGT+TGG - chr7.2:23612015-23612034 MS.gene54958:CDS 45.0%
GCTCCTAGATGCTCAAGATT+CGG + chr7.2:23611451-23611470 None:intergenic 45.0%
GTCGACATCAGCAGTAATGT+AGG + chr7.2:23611762-23611781 None:intergenic 45.0%
GTCGACATGTCATGTCATGT+TGG - chr7.2:23611776-23611795 MS.gene54958:intron 45.0%
GTCGGTGAATTCGATATGGT+CGG + chr7.2:23610990-23611009 None:intergenic 45.0%
TCTTTCTCTCCATATCCGTG+TGG - chr7.2:23611213-23611232 MS.gene54958:intron 45.0%
TGTCCGAATCTTGAGCATCT+AGG - chr7.2:23611445-23611464 MS.gene54958:intron 45.0%
! AGGCTTTGTGGAACAAGTTC+TGG + chr7.2:23612235-23612254 None:intergenic 45.0%
! CAAAGAGATGGACTCATCTC+TGG - chr7.2:23610957-23610976 MS.gene54958:intron 45.0%
! CTATTTCAGCTTGCTCCCTT+TGG + chr7.2:23612375-23612394 None:intergenic 45.0%
! TTTGAAGCTTAGGGCAGCAA+TGG + chr7.2:23612054-23612073 None:intergenic 45.0%
AACCCTTCACTTGGAAGCGA+CGG + chr7.2:23611321-23611340 None:intergenic 50.0%
AGGAGGAGGAATGAAGAAGG+TGG - chr7.2:23612190-23612209 MS.gene54958:CDS 50.0%
ATCTGACTCAGAATCGCGTC+AGG + chr7.2:23610890-23610909 None:intergenic 50.0%
ATTTGATGCGCAACCACAGG+GGG - chr7.2:23612704-23612723 MS.gene54958:CDS 50.0%
CAGATTTGATGCGCAACCAC+AGG - chr7.2:23612701-23612720 MS.gene54958:CDS 50.0%
GACATGTTGCAGAGGCCTTT+GGG + chr7.2:23612417-23612436 None:intergenic 50.0%
GATTTGATGCGCAACCACAG+GGG - chr7.2:23612703-23612722 MS.gene54958:CDS 50.0%
GCAAGGAGGAGGAATGAAGA+AGG - chr7.2:23612187-23612206 MS.gene54958:CDS 50.0%
GTCTCGTCTCTCTACCAAAG+AGG - chr7.2:23610913-23610932 MS.gene54958:intron 50.0%
GTTGAGGAAATGAGAGGCAG+AGG + chr7.2:23611086-23611105 None:intergenic 50.0%
TGACATGTTGCAGAGGCCTT+TGG + chr7.2:23612418-23612437 None:intergenic 50.0%
!! ATGGTGGGCTTCATGGTTTC+CGG - chr7.2:23611570-23611589 MS.gene54958:CDS 50.0%
!! GTACCATTGTAAGGGCGTTG+TGG + chr7.2:23611965-23611984 None:intergenic 50.0%
!! TCACTGAATGGTGGGCTTCA+TGG - chr7.2:23611563-23611582 MS.gene54958:CDS 50.0%
ATCTTATCCACCGCTGGTGG+TGG + chr7.2:23610857-23610876 None:intergenic 55.0%
CTCCGTCGCTTCCAAGTGAA+GGG - chr7.2:23611316-23611335 MS.gene54958:CDS 55.0%
CTGATCTTATCCACCGCTGG+TGG + chr7.2:23610860-23610879 None:intergenic 55.0%
CTGCTGATCTTATCCACCGC+TGG + chr7.2:23610863-23610882 None:intergenic 55.0%
GCTTGTGGCAACTGCCTCTT+TGG + chr7.2:23610930-23610949 None:intergenic 55.0%
GGCTTCACGAGGGACCAAAA+TGG + chr7.2:23611065-23611084 None:intergenic 55.0%
GTGCCACAACGCCCTTACAA+TGG - chr7.2:23611959-23611978 MS.gene54958:CDS 55.0%
TAGACAACTCTTGCCCCCTG+TGG + chr7.2:23612720-23612739 None:intergenic 55.0%
AGCAACACCACCACCACCAG+CGG - chr7.2:23610844-23610863 MS.gene54958:intron 60.0%
CCTCCGTCGCTTCCAAGTGA+AGG - chr7.2:23611315-23611334 MS.gene54958:CDS 60.0%
CCTTCACTTGGAAGCGACGG+AGG + chr7.2:23611318-23611337 None:intergenic 60.0%
GAGAGGCAGAGGCTTCACGA+GGG + chr7.2:23611075-23611094 None:intergenic 60.0%
TGAGAGGCAGAGGCTTCACG+AGG + chr7.2:23611076-23611095 None:intergenic 60.0%
TGCAGAGGCCTTTGGGCATG+TGG + chr7.2:23612410-23612429 None:intergenic 60.0%
!! TTATCCACCGCTGGTGGTGG+TGG + chr7.2:23610854-23610873 None:intergenic 60.0%
AACACCACCACCACCAGCGG+TGG - chr7.2:23610847-23610866 MS.gene54958:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23610818 23612743 23610818 ID=MS.gene54958
chr7.2 mRNA 23610818 23612743 23610818 ID=MS.gene54958.t1;Parent=MS.gene54958
chr7.2 exon 23611883 23612743 23611883 ID=MS.gene54958.t1.exon1;Parent=MS.gene54958.t1
chr7.2 CDS 23611883 23612743 23611883 ID=cds.MS.gene54958.t1;Parent=MS.gene54958.t1
chr7.2 exon 23611471 23611611 23611471 ID=MS.gene54958.t1.exon2;Parent=MS.gene54958.t1
chr7.2 CDS 23611471 23611611 23611471 ID=cds.MS.gene54958.t1;Parent=MS.gene54958.t1
chr7.2 exon 23611247 23611386 23611247 ID=MS.gene54958.t1.exon3;Parent=MS.gene54958.t1
chr7.2 CDS 23611247 23611386 23611247 ID=cds.MS.gene54958.t1;Parent=MS.gene54958.t1
chr7.2 exon 23610818 23610857 23610818 ID=MS.gene54958.t1.exon4;Parent=MS.gene54958.t1
chr7.2 CDS 23610818 23610857 23610818 ID=cds.MS.gene54958.t1;Parent=MS.gene54958.t1
Gene Sequence

>MS.gene54958

ATGCGTCGACGGAGGAGAATTTCTGAAGCAACACCACCACCACCAGCGGTGGATAAGATCAGCAGTTTACCTGACGCGATTCTGAGTCAGATTCTGTCTCGTCTCTCTACCAAAGAGGCAGTTGCCACAAGCATTCTGTCAAAGAGATGGACTCATCTCTGGAAATTTACCGACCATATCGAATTCACCGACATCACACTGAATGACATTGTTTCTACTTACAGATTCAATGATTCTATGTACTCCATTTTGGTCCCTCGTGAAGCCTCTGCCTCTCATTTCCTCAACAGATTCACCCTTGAAATTGAATACGGTAACACTGATCTTGCCTTTCGTTTCGGCATTCACAATGTCAACAAATGGATTAACCTTGTTGTTCAACATGGACTCAAGCATCTTTCTCTCCATATCCGTGTGGATGACCTTTATGATAATGACGACCAATTACCCAAATTGCCTATTGGTATTCTCACATGCACAACATTAGTGAGTCTCAACCTCCGTCGCTTCCAAGTGAAGGGTTTTGATTTTTCTTCCGTTGGATTTGGATTTCCATCGCTCAATATCCTTCAATTGAGTGATATGGTCTTTCATGAAGTTCGTGATTTTATGTTGCTTCTGGCTGGATGTCCGAATCTTGAGCATCTAGGAGCGGTAGATATACACTTCCATTGTGAGGAAGTAGATTCTCTTACCATTCAAGAGTTTAAAAGCTTAAGCTTACCCAAATTGACCACTGTTGATATCACTGAATGGTGGGCTTCATGGTTTCCGGTGAAAGCACTTTCCAATTCGAAGCATATGTGCTTGCATACATTCATGTTAAGCACAAAAGATCACAAAATCTACAAGCTCTACGAGGTTCGTTTTATTTTGAATATCATGCATTGCTACTTCAATCTATACATCACCGACATTTCATATTTAAGGTGTGTCAGTGTCCTACATTACTGCTGATGTCGACATGTCATGTCATGTTGGTGTCCAACATTACCCGTGTTCAATAATTCTTTTTTCTCAAATCCATGTCAGTTAAATGAATACCATACACTGATGGAATGGTATGGAAAACAAAGAAAAATTGTGATTCATCTGCATTTGTGAATTTTACCCTAACTTGACATCTTTATAGTTAATTCAGGTGCCACAACGCCCTTACAATGGTACTCTGATATTTCATAATTTGACCTACTTGGAGCTACATGATAACTGGGAGTTGGTAGCACAAGTGCTCCATTGCTGCCCTAAGCTTCAAAGTCTCGAACTTTACCAGGTTTGCTAATTCTATGAATCACATCCTGTTTATCTTTTCTTAACACGCCTTTATGTTGAATTTTATTTTGTGTCCTATTAATAGGATTCATATGACGCAAGGAGGAGGAATGAAGAAGGTGGTCAAGAAAATTGGGTGGAACCAGAACTTGTTCCACAAAGCCTGTCATCATATCTCAGAATTTGCACCATTCATAACTTTTTAGGCCTAGAAAGCGAGCTTATGTTAGCAAAATATATTTTGAAGAAAGCTAAAAGTTTACTAATCTTGGAAATCTGGAACCAAAGGGAGCAAGCTGAAATAGAAAGAAGATTGTCCACATGCCCAAAGGCCTCTGCAACATGTCAACTTTTATTTTATTGATAACATATAGATTGTGTAAATGGTAGTTTCTCTATCCTGCTTGCTGTTTCATTAGCTTCTATTTAGTTGTTTGAACTATGGGCTATTATGAATGTCATGACTTTGTCTCGCTGCATAAATGAAGGAACAATGATTTTTAAATGATTTAATTTGTACTCATCTACCTTACCTGTTTATTTATTGAAACTGTTTATGACTTCAATTACATTAAGGCTTATCCATTTTACGGGTACTTATATGCTAAATTCAGATTTGATGCGCAACCACAGGGGGCAAGAGTTGTCTATTAA

Protein sequence

>MS.gene54958.t1

MRRRRRISEATPPPPAVDKISSLPDAILSQILSRLSTKEAVATSILSKRWTHLWKFTDHIEFTDITLNDIVSTYRFNDSMYSILVPREASASHFLNRFTLEIEYGNTDLAFRFGIHNVNKWINLVVQHGLKHLSLHIRVDDLYDNDDQLPKLPIGILTCTTLVSLNLRRFQVKGFDFSSVGFGFPSLNILQLSDMVFHEVRDFMLLLAGCPNLEHLGAVDIHFHCEEVDSLTIQEFKSLSLPKLTTVDITEWWASWFPVKALSNSKHMCLHTFMLSTKDHKIYKLYELIQVPQRPYNGTLIFHNLTYLELHDNWELVAQVLHCCPKLQSLELYQDSYDARRRNEEGGQENWVEPELVPQSLSSYLRICTIHNFLGLESELIFDAQPQGARVVY