Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007875.t1 | XP_013445396.1 | 94.9 | 433 | 20 | 1 | 1 | 431 | 45 | 477 | 4.40E-235 | 823.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007875.t1 | Q9FZ52 | 26.4 | 469 | 246 | 22 | 2 | 431 | 41 | 449 | 3.5e-23 | 110.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007875.t1 | A0A072TPW1 | 94.9 | 433 | 20 | 1 | 1 | 431 | 45 | 477 | 3.2e-235 | 823.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007875.t1 | MTR_8g058970 | 94.919 | 433 | 20 | 1 | 1 | 431 | 45 | 477 | 0.0 | 824 |
MS.gene007875.t1 | MTR_8g468810 | 65.046 | 432 | 131 | 4 | 1 | 431 | 51 | 463 | 0.0 | 541 |
MS.gene007875.t1 | MTR_8g468810 | 66.471 | 340 | 94 | 5 | 1 | 339 | 51 | 371 | 7.35e-149 | 428 |
MS.gene007875.t1 | MTR_2g083840 | 54.734 | 433 | 168 | 8 | 3 | 431 | 49 | 457 | 1.18e-148 | 430 |
MS.gene007875.t1 | MTR_4g032730 | 48.253 | 458 | 173 | 15 | 3 | 430 | 43 | 466 | 1.84e-124 | 369 |
MS.gene007875.t1 | MTR_8g468810 | 64.111 | 287 | 84 | 3 | 1 | 287 | 51 | 318 | 4.15e-120 | 353 |
MS.gene007875.t1 | MTR_8g468810 | 64.789 | 284 | 81 | 3 | 1 | 284 | 51 | 315 | 6.20e-120 | 352 |
MS.gene007875.t1 | MTR_8g468810 | 64.789 | 284 | 81 | 3 | 1 | 284 | 51 | 315 | 1.30e-119 | 352 |
MS.gene007875.t1 | MTR_8g062270 | 48.090 | 445 | 184 | 12 | 1 | 430 | 41 | 453 | 6.77e-117 | 349 |
MS.gene007875.t1 | MTR_8g467800 | 49.550 | 444 | 174 | 14 | 2 | 431 | 46 | 453 | 3.65e-116 | 347 |
MS.gene007875.t1 | MTR_5g092960 | 49.552 | 446 | 176 | 14 | 3 | 430 | 47 | 461 | 1.91e-115 | 346 |
MS.gene007875.t1 | MTR_8g468840 | 46.241 | 439 | 193 | 12 | 2 | 428 | 40 | 447 | 8.37e-109 | 328 |
MS.gene007875.t1 | MTR_8g468760 | 45.495 | 444 | 169 | 12 | 1 | 430 | 34 | 418 | 1.94e-100 | 306 |
MS.gene007875.t1 | MTR_8g014260 | 42.661 | 436 | 214 | 15 | 4 | 431 | 44 | 451 | 6.07e-97 | 298 |
MS.gene007875.t1 | MTR_8g445780 | 45.170 | 383 | 171 | 12 | 4 | 381 | 41 | 389 | 1.35e-85 | 267 |
MS.gene007875.t1 | MTR_8g469020 | 39.956 | 453 | 214 | 18 | 2 | 431 | 34 | 451 | 2.02e-83 | 263 |
MS.gene007875.t1 | MTR_5g092960 | 49.714 | 350 | 138 | 11 | 3 | 339 | 47 | 371 | 2.23e-79 | 251 |
MS.gene007875.t1 | MTR_8g058965 | 38.393 | 448 | 227 | 14 | 2 | 431 | 40 | 456 | 6.27e-76 | 244 |
MS.gene007875.t1 | MTR_8g070950 | 35.281 | 445 | 223 | 13 | 1 | 431 | 41 | 434 | 1.42e-69 | 227 |
MS.gene007875.t1 | MTR_4g050250 | 38.987 | 395 | 196 | 9 | 1 | 373 | 47 | 418 | 2.34e-67 | 221 |
MS.gene007875.t1 | MTR_8g062010 | 36.591 | 440 | 226 | 15 | 1 | 431 | 35 | 430 | 5.95e-67 | 220 |
MS.gene007875.t1 | MTR_8g467800 | 50.694 | 288 | 113 | 8 | 2 | 284 | 46 | 309 | 2.16e-66 | 216 |
MS.gene007875.t1 | MTR_4g024710 | 44.371 | 302 | 152 | 10 | 134 | 431 | 58 | 347 | 6.07e-65 | 212 |
MS.gene007875.t1 | MTR_8g062080 | 35.360 | 444 | 227 | 14 | 1 | 431 | 49 | 445 | 2.36e-64 | 213 |
MS.gene007875.t1 | MTR_8g014160 | 34.932 | 438 | 198 | 11 | 2 | 431 | 67 | 425 | 4.29e-64 | 212 |
MS.gene007875.t1 | MTR_8g062300 | 35.435 | 460 | 234 | 13 | 1 | 431 | 52 | 477 | 3.24e-63 | 211 |
MS.gene007875.t1 | MTR_8g062310 | 35.963 | 431 | 217 | 14 | 4 | 431 | 54 | 428 | 8.67e-63 | 209 |
MS.gene007875.t1 | MTR_4g024745 | 42.857 | 280 | 149 | 8 | 132 | 408 | 10 | 281 | 5.57e-52 | 176 |
MS.gene007875.t1 | MTR_8g014210 | 43.802 | 242 | 124 | 6 | 191 | 431 | 1 | 231 | 1.86e-49 | 168 |
MS.gene007875.t1 | MTR_8g077460 | 31.507 | 438 | 190 | 19 | 4 | 431 | 38 | 375 | 1.34e-44 | 159 |
MS.gene007875.t1 | MTR_8g467790 | 31.959 | 388 | 187 | 15 | 1 | 376 | 174 | 496 | 2.20e-37 | 142 |
MS.gene007875.t1 | MTR_5g084070 | 28.271 | 428 | 254 | 16 | 2 | 423 | 39 | 419 | 2.61e-27 | 113 |
MS.gene007875.t1 | MTR_5g080710 | 26.437 | 435 | 260 | 15 | 2 | 423 | 59 | 446 | 1.04e-22 | 100 |
MS.gene007875.t1 | MTR_2g086020 | 44.853 | 136 | 70 | 3 | 298 | 431 | 183 | 315 | 3.08e-22 | 97.1 |
MS.gene007875.t1 | MTR_2g086020 | 30.667 | 225 | 115 | 7 | 1 | 224 | 1 | 185 | 3.45e-16 | 79.3 |
MS.gene007875.t1 | MTR_5g021550 | 38.636 | 132 | 63 | 4 | 4 | 133 | 47 | 162 | 1.29e-19 | 85.9 |
MS.gene007875.t1 | MTR_4g056040 | 27.500 | 400 | 235 | 13 | 41 | 419 | 99 | 464 | 4.54e-19 | 89.7 |
MS.gene007875.t1 | MTR_3g087260 | 28.650 | 363 | 187 | 13 | 120 | 430 | 114 | 456 | 1.93e-18 | 87.4 |
MS.gene007875.t1 | MTR_4g056070 | 27.901 | 362 | 202 | 14 | 62 | 381 | 92 | 436 | 4.33e-18 | 86.3 |
MS.gene007875.t1 | MTR_8g014290 | 37.410 | 139 | 63 | 6 | 4 | 134 | 38 | 160 | 1.75e-17 | 79.7 |
MS.gene007875.t1 | MTR_7g098510 | 36.170 | 141 | 79 | 4 | 298 | 431 | 255 | 391 | 2.49e-16 | 80.9 |
MS.gene007875.t1 | MTR_3g036250 | 28.870 | 239 | 143 | 6 | 203 | 428 | 139 | 363 | 4.06e-16 | 79.7 |
MS.gene007875.t1 | MTR_3g108150 | 25.000 | 440 | 227 | 18 | 2 | 430 | 39 | 386 | 4.17e-16 | 80.1 |
MS.gene007875.t1 | MTR_7g056433 | 35.417 | 144 | 77 | 6 | 297 | 431 | 253 | 389 | 9.45e-16 | 79.0 |
MS.gene007875.t1 | MTR_1g041245 | 34.667 | 150 | 83 | 5 | 293 | 431 | 241 | 386 | 9.45e-15 | 75.9 |
MS.gene007875.t1 | MTR_1089s0010 | 26.908 | 249 | 154 | 8 | 200 | 431 | 142 | 379 | 1.04e-14 | 75.9 |
MS.gene007875.t1 | MTR_6g040270 | 24.208 | 442 | 223 | 21 | 3 | 429 | 35 | 379 | 4.12e-14 | 73.9 |
MS.gene007875.t1 | MTR_5g058100 | 27.106 | 273 | 174 | 8 | 179 | 430 | 115 | 383 | 5.88e-14 | 73.6 |
MS.gene007875.t1 | MTR_7g098570 | 28.938 | 273 | 151 | 12 | 181 | 427 | 134 | 389 | 6.23e-14 | 73.9 |
MS.gene007875.t1 | MTR_7g033915 | 24.424 | 434 | 217 | 18 | 2 | 430 | 37 | 364 | 1.04e-13 | 72.4 |
MS.gene007875.t1 | MTR_7g098480 | 24.374 | 439 | 228 | 17 | 2 | 430 | 44 | 388 | 1.27e-13 | 72.8 |
MS.gene007875.t1 | MTR_7g026500 | 26.383 | 235 | 147 | 7 | 215 | 430 | 167 | 394 | 1.93e-13 | 72.0 |
MS.gene007875.t1 | MTR_3g108560 | 37.226 | 137 | 73 | 5 | 303 | 430 | 256 | 388 | 4.00e-13 | 70.9 |
MS.gene007875.t1 | MTR_1g085120 | 25.661 | 378 | 198 | 16 | 66 | 431 | 165 | 471 | 5.75e-13 | 70.9 |
MS.gene007875.t1 | MTR_1g085120 | 25.132 | 378 | 200 | 15 | 66 | 431 | 240 | 546 | 7.34e-13 | 70.9 |
MS.gene007875.t1 | MTR_4g113810 | 32.895 | 152 | 96 | 4 | 85 | 232 | 13 | 162 | 9.30e-13 | 66.6 |
MS.gene007875.t1 | MTR_8g014230 | 46.377 | 69 | 36 | 1 | 347 | 415 | 25 | 92 | 9.61e-13 | 64.7 |
MS.gene007875.t1 | MTR_2g020180 | 35.211 | 142 | 69 | 5 | 298 | 431 | 89 | 215 | 1.21e-12 | 67.4 |
MS.gene007875.t1 | MTR_0543s0010 | 34.752 | 141 | 71 | 6 | 303 | 430 | 317 | 449 | 1.59e-12 | 69.3 |
MS.gene007875.t1 | MTR_7g032370 | 32.374 | 139 | 83 | 3 | 301 | 431 | 217 | 352 | 2.06e-12 | 68.6 |
MS.gene007875.t1 | MTR_7g032380 | 25.733 | 307 | 175 | 12 | 149 | 431 | 79 | 356 | 3.17e-12 | 67.8 |
MS.gene007875.t1 | MTR_1g108800 | 28.383 | 303 | 177 | 12 | 154 | 429 | 51 | 340 | 3.40e-12 | 67.8 |
MS.gene007875.t1 | MTR_4g080773 | 25.059 | 423 | 256 | 17 | 2 | 396 | 45 | 434 | 3.53e-12 | 68.6 |
MS.gene007875.t1 | MTR_5g013500 | 30.000 | 140 | 91 | 3 | 297 | 431 | 228 | 365 | 4.18e-12 | 67.8 |
MS.gene007875.t1 | MTR_4g080773 | 24.882 | 422 | 258 | 17 | 2 | 396 | 45 | 434 | 4.75e-12 | 68.2 |
MS.gene007875.t1 | MTR_5g008950 | 25.723 | 311 | 190 | 12 | 153 | 431 | 64 | 365 | 7.52e-12 | 67.0 |
MS.gene007875.t1 | MTR_3g040700 | 27.232 | 224 | 137 | 6 | 199 | 408 | 171 | 382 | 7.84e-12 | 67.4 |
MS.gene007875.t1 | MTR_3g105060 | 33.588 | 131 | 75 | 3 | 301 | 431 | 255 | 373 | 1.28e-11 | 66.2 |
MS.gene007875.t1 | MTR_5g058000 | 26.523 | 279 | 160 | 11 | 179 | 430 | 114 | 374 | 1.44e-11 | 66.2 |
MS.gene007875.t1 | MTR_6g022500 | 25.217 | 345 | 187 | 11 | 92 | 431 | 198 | 476 | 1.61e-11 | 66.2 |
MS.gene007875.t1 | MTR_7g034120 | 30.827 | 133 | 80 | 3 | 303 | 431 | 184 | 308 | 1.78e-11 | 65.5 |
MS.gene007875.t1 | MTR_3g109982 | 28.440 | 327 | 175 | 14 | 120 | 398 | 129 | 444 | 3.28e-11 | 65.9 |
MS.gene007875.t1 | MTR_7g114710 | 31.034 | 145 | 86 | 3 | 296 | 431 | 225 | 364 | 4.19e-11 | 64.7 |
MS.gene007875.t1 | MTR_5g012840 | 34.815 | 135 | 73 | 4 | 304 | 431 | 192 | 318 | 7.75e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007875.t1 | AT1G16930 | 26.439 | 469 | 246 | 22 | 2 | 431 | 41 | 449 | 4.10e-26 | 110 |
MS.gene007875.t1 | AT1G16930 | 26.439 | 469 | 246 | 22 | 2 | 431 | 41 | 449 | 4.10e-26 | 110 |
MS.gene007875.t1 | AT1G16930 | 26.439 | 469 | 246 | 22 | 2 | 431 | 41 | 449 | 4.10e-26 | 110 |
MS.gene007875.t1 | AT5G56420 | 25.624 | 441 | 267 | 16 | 2 | 431 | 32 | 422 | 1.13e-23 | 102 |
MS.gene007875.t1 | AT5G56420 | 25.624 | 441 | 267 | 16 | 2 | 431 | 32 | 422 | 1.13e-23 | 102 |
MS.gene007875.t1 | AT5G56420 | 25.624 | 441 | 267 | 16 | 2 | 431 | 32 | 422 | 1.13e-23 | 102 |
MS.gene007875.t1 | AT4G26340 | 24.887 | 442 | 270 | 16 | 2 | 431 | 28 | 419 | 2.48e-23 | 101 |
MS.gene007875.t1 | AT5G62970 | 28.814 | 354 | 226 | 13 | 86 | 430 | 112 | 448 | 1.65e-22 | 99.8 |
MS.gene007875.t1 | AT1G78750 | 25.280 | 447 | 279 | 16 | 2 | 428 | 44 | 455 | 1.74e-22 | 99.8 |
MS.gene007875.t1 | AT1G78750 | 25.280 | 447 | 279 | 16 | 2 | 428 | 44 | 455 | 1.74e-22 | 99.8 |
MS.gene007875.t1 | AT5G22720 | 27.637 | 474 | 240 | 24 | 2 | 430 | 49 | 464 | 1.06e-21 | 97.4 |
MS.gene007875.t1 | AT1G78760 | 26.164 | 451 | 259 | 24 | 2 | 429 | 42 | 441 | 9.35e-21 | 94.7 |
MS.gene007875.t1 | AT5G22730 | 26.350 | 463 | 250 | 18 | 4 | 429 | 56 | 464 | 6.99e-20 | 92.0 |
MS.gene007875.t1 | AT5G22730 | 26.350 | 463 | 250 | 18 | 4 | 429 | 56 | 464 | 6.99e-20 | 92.0 |
MS.gene007875.t1 | AT1G51370 | 27.455 | 448 | 240 | 25 | 4 | 428 | 47 | 432 | 4.83e-19 | 89.4 |
MS.gene007875.t1 | AT4G13985 | 24.295 | 461 | 268 | 18 | 1 | 428 | 44 | 456 | 5.11e-19 | 89.4 |
MS.gene007875.t1 | AT5G56390 | 25.390 | 449 | 260 | 18 | 3 | 430 | 30 | 424 | 9.78e-19 | 88.2 |
MS.gene007875.t1 | AT3G54910 | 25.672 | 409 | 234 | 17 | 48 | 431 | 10 | 373 | 1.53e-18 | 87.0 |
MS.gene007875.t1 | AT3G54910 | 25.672 | 409 | 234 | 17 | 48 | 431 | 10 | 373 | 1.53e-18 | 87.0 |
MS.gene007875.t1 | AT3G54910 | 25.672 | 409 | 234 | 17 | 48 | 431 | 10 | 373 | 1.53e-18 | 87.0 |
MS.gene007875.t1 | AT1G32375 | 26.685 | 356 | 222 | 13 | 91 | 431 | 91 | 422 | 2.85e-18 | 87.0 |
MS.gene007875.t1 | AT1G32375 | 26.685 | 356 | 222 | 13 | 91 | 431 | 91 | 422 | 2.85e-18 | 87.0 |
MS.gene007875.t1 | AT4G00160 | 26.269 | 453 | 257 | 19 | 2 | 430 | 42 | 441 | 9.22e-18 | 85.5 |
MS.gene007875.t1 | AT5G56370 | 24.554 | 448 | 264 | 18 | 2 | 430 | 28 | 420 | 1.26e-17 | 85.1 |
MS.gene007875.t1 | AT5G56370 | 24.554 | 448 | 264 | 18 | 2 | 430 | 28 | 420 | 1.26e-17 | 85.1 |
MS.gene007875.t1 | AT1G80470 | 23.043 | 447 | 267 | 22 | 4 | 428 | 43 | 434 | 1.76e-17 | 84.7 |
MS.gene007875.t1 | AT5G38570 | 29.455 | 275 | 161 | 9 | 164 | 430 | 126 | 375 | 3.15e-17 | 83.2 |
MS.gene007875.t1 | AT1G13780 | 27.052 | 329 | 206 | 12 | 120 | 428 | 138 | 452 | 1.28e-16 | 82.0 |
MS.gene007875.t1 | AT2G04230 | 25.446 | 448 | 276 | 15 | 2 | 431 | 39 | 446 | 1.50e-16 | 82.0 |
MS.gene007875.t1 | AT4G10400 | 23.864 | 440 | 265 | 19 | 2 | 430 | 28 | 408 | 2.51e-16 | 80.9 |
MS.gene007875.t1 | AT4G10400 | 23.864 | 440 | 265 | 19 | 2 | 430 | 28 | 408 | 2.51e-16 | 80.9 |
MS.gene007875.t1 | AT4G10400 | 23.864 | 440 | 265 | 19 | 2 | 430 | 28 | 408 | 2.51e-16 | 80.9 |
MS.gene007875.t1 | AT5G44950 | 29.236 | 301 | 179 | 13 | 148 | 428 | 149 | 435 | 3.03e-16 | 80.9 |
MS.gene007875.t1 | AT3G50710 | 28.453 | 362 | 212 | 20 | 91 | 431 | 92 | 427 | 3.52e-16 | 80.5 |
MS.gene007875.t1 | AT5G53635 | 25.446 | 448 | 265 | 19 | 3 | 430 | 27 | 425 | 3.98e-16 | 80.5 |
MS.gene007875.t1 | AT5G27750 | 28.729 | 362 | 195 | 17 | 101 | 431 | 128 | 457 | 6.11e-16 | 80.1 |
MS.gene007875.t1 | AT5G56700 | 27.129 | 317 | 194 | 13 | 91 | 392 | 52 | 346 | 6.42e-16 | 79.3 |
MS.gene007875.t1 | AT3G26930 | 25.708 | 459 | 252 | 21 | 1 | 431 | 1 | 398 | 1.22e-15 | 79.0 |
MS.gene007875.t1 | AT3G26930 | 25.708 | 459 | 252 | 21 | 1 | 431 | 46 | 443 | 1.35e-15 | 79.0 |
MS.gene007875.t1 | AT4G13965 | 27.314 | 443 | 248 | 21 | 2 | 428 | 36 | 420 | 2.69e-15 | 77.8 |
MS.gene007875.t1 | AT5G56820 | 27.714 | 350 | 198 | 18 | 101 | 430 | 111 | 425 | 3.97e-15 | 77.4 |
MS.gene007875.t1 | AT5G22670 | 27.147 | 361 | 220 | 16 | 94 | 431 | 102 | 442 | 7.63e-15 | 76.6 |
MS.gene007875.t1 | AT3G26920 | 27.374 | 358 | 216 | 16 | 89 | 430 | 10 | 339 | 8.46e-15 | 75.9 |
MS.gene007875.t1 | AT3G26920 | 27.374 | 358 | 216 | 16 | 89 | 430 | 10 | 339 | 8.46e-15 | 75.9 |
MS.gene007875.t1 | AT4G00315 | 26.432 | 454 | 268 | 22 | 2 | 430 | 28 | 440 | 1.11e-14 | 76.3 |
MS.gene007875.t1 | AT5G44980 | 29.206 | 315 | 176 | 17 | 141 | 430 | 141 | 433 | 1.68e-14 | 75.5 |
MS.gene007875.t1 | AT5G44980 | 29.206 | 315 | 176 | 17 | 141 | 430 | 141 | 433 | 1.68e-14 | 75.5 |
MS.gene007875.t1 | AT5G44970 | 27.928 | 333 | 197 | 15 | 83 | 394 | 40 | 350 | 3.00e-14 | 74.3 |
MS.gene007875.t1 | AT3G49030 | 24.107 | 448 | 267 | 18 | 2 | 430 | 47 | 440 | 4.62e-14 | 74.3 |
MS.gene007875.t1 | AT5G22660 | 26.933 | 375 | 220 | 18 | 86 | 428 | 91 | 443 | 5.03e-14 | 73.9 |
MS.gene007875.t1 | AT5G50270 | 24.590 | 427 | 251 | 18 | 3 | 408 | 30 | 406 | 8.67e-14 | 73.2 |
MS.gene007875.t1 | AT5G56560 | 23.810 | 441 | 269 | 16 | 3 | 431 | 33 | 418 | 1.06e-13 | 72.8 |
MS.gene007875.t1 | AT3G49030 | 23.462 | 439 | 255 | 15 | 2 | 430 | 47 | 414 | 3.48e-13 | 71.2 |
MS.gene007875.t1 | AT5G56800 | 27.551 | 294 | 169 | 11 | 153 | 430 | 78 | 343 | 4.01e-13 | 70.5 |
MS.gene007875.t1 | AT5G60610 | 24.233 | 326 | 215 | 11 | 86 | 397 | 80 | 387 | 1.72e-12 | 68.9 |
MS.gene007875.t1 | AT5G60610 | 24.233 | 326 | 215 | 11 | 86 | 397 | 80 | 387 | 1.72e-12 | 68.9 |
MS.gene007875.t1 | AT5G38590 | 26.266 | 316 | 193 | 14 | 94 | 396 | 95 | 383 | 2.70e-12 | 68.6 |
MS.gene007875.t1 | AT5G56400 | 24.726 | 457 | 252 | 18 | 4 | 431 | 62 | 455 | 2.72e-12 | 68.9 |
MS.gene007875.t1 | AT1G55660 | 24.009 | 454 | 279 | 21 | 2 | 430 | 79 | 491 | 3.38e-12 | 68.6 |
MS.gene007875.t1 | AT5G56325 | 27.018 | 285 | 154 | 13 | 170 | 431 | 11 | 264 | 9.90e-12 | 65.5 |
MS.gene007875.t1 | AT5G22610 | 27.139 | 339 | 202 | 16 | 120 | 428 | 140 | 463 | 1.51e-11 | 66.6 |
MS.gene007875.t1 | AT5G22610 | 26.154 | 325 | 193 | 14 | 120 | 428 | 140 | 433 | 2.39e-11 | 65.9 |
MS.gene007875.t1 | AT1G55030 | 30.169 | 295 | 166 | 14 | 118 | 397 | 131 | 400 | 2.91e-11 | 65.5 |
MS.gene007875.t1 | AT1G55030 | 30.169 | 295 | 166 | 14 | 118 | 397 | 121 | 390 | 3.29e-11 | 65.1 |
MS.gene007875.t1 | AT3G54160 | 25.926 | 432 | 249 | 21 | 24 | 428 | 36 | 423 | 4.37e-11 | 65.1 |
MS.gene007875.t1 | AT3G52690 | 27.852 | 298 | 181 | 12 | 147 | 430 | 20 | 297 | 4.97e-11 | 63.9 |
MS.gene007875.t1 | AT5G56410 | 24.083 | 436 | 238 | 20 | 2 | 397 | 29 | 411 | 5.35e-11 | 64.7 |
Find 101 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAAGAAAATGATTATTTC+TGG | 0.183524 | 8.3:-47885343 | MS.gene007875:CDS |
TTGTCCAATATGCACATTAA+AGG | 0.261211 | 8.3:-47885427 | MS.gene007875:CDS |
CGGTGAGTTTCAAACTCTTC+AGG | 0.283312 | 8.3:+47886096 | None:intergenic |
ACTTCTCCCACTTCTTCTTT+TGG | 0.291320 | 8.3:+47885308 | None:intergenic |
ATCATTAGCAAATGTAATTC+TGG | 0.311202 | 8.3:+47886010 | None:intergenic |
CCGATCCGGTGCCCGGTTTA+CGG | 0.312339 | 8.3:-47887182 | MS.gene007875:CDS |
ATACCCTTTAATGTGCATAT+TGG | 0.316620 | 8.3:+47885423 | None:intergenic |
ACGAAGCTTGGCCAGAGATA+TGG | 0.321507 | 8.3:+47886130 | None:intergenic |
AGACAGTTAGGAACAGTATT+AGG | 0.329586 | 8.3:+47885460 | None:intergenic |
TTCAAACTCTTCAGGGTAGA+TGG | 0.342282 | 8.3:+47886104 | None:intergenic |
CAAGTAAGCATGTGGGTCTT+CGG | 0.352555 | 8.3:+47887219 | None:intergenic |
AGTTCCAGGGTTTCTAAGAT+TGG | 0.360590 | 8.3:+47886164 | None:intergenic |
TGTAGTAAATGGTGAAATTC+CGG | 0.365973 | 8.3:+47885697 | None:intergenic |
TGGGAGAAAAGGAGAGTTCC+AGG | 0.370772 | 8.3:+47886150 | None:intergenic |
TGAGCTCTAGATGTAGTAAA+TGG | 0.396405 | 8.3:+47885686 | None:intergenic |
ACCGCCAAGCCACTTTCATT+TGG | 0.398775 | 8.3:+47885487 | None:intergenic |
AAGACGATGAAACTAGATAT+TGG | 0.406559 | 8.3:-47886230 | MS.gene007875:CDS |
CGTAGTAGAAGTTGAATGAT+TGG | 0.408876 | 8.3:+47887377 | None:intergenic |
CGAAGCTTGGCCAGAGATAT+GGG | 0.415687 | 8.3:+47886131 | None:intergenic |
CGTGGGTCCGATCCGGTGCC+CGG | 0.424227 | 8.3:-47887189 | MS.gene007875:CDS |
CGACAGACATTTCCGTAAAC+CGG | 0.432497 | 8.3:+47887170 | None:intergenic |
AAGTAAGCATGTGGGTCTTC+GGG | 0.436541 | 8.3:+47887220 | None:intergenic |
CGGAAATGTCTGTCGATGCT+TGG | 0.439301 | 8.3:-47887162 | MS.gene007875:CDS |
GGCCAGAGATATGGGAGAAA+AGG | 0.441629 | 8.3:+47886139 | None:intergenic |
GTTTAATTCCAGTGAGAGCT+TGG | 0.442769 | 8.3:+47885892 | None:intergenic |
GAGGCTAAGGTATTTGAGAT+TGG | 0.443266 | 8.3:+47886034 | None:intergenic |
TTGCTAATGATACTGCGGTT+GGG | 0.443385 | 8.3:-47885998 | MS.gene007875:CDS |
TGCTAATGATACTGCGGTTG+GGG | 0.443931 | 8.3:-47885997 | MS.gene007875:CDS |
AGGCTAAGGTATTTGAGATT+GGG | 0.448137 | 8.3:+47886035 | None:intergenic |
TGTCCAATATGCACATTAAA+GGG | 0.450045 | 8.3:-47885426 | MS.gene007875:CDS |
AAGTGAGACACAAGACAGTT+AGG | 0.455291 | 8.3:+47885448 | None:intergenic |
GTTCCAGGGTTTCTAAGATT+GGG | 0.463116 | 8.3:+47886165 | None:intergenic |
AGTTTCATCGTCTTTAATGA+AGG | 0.463815 | 8.3:+47886239 | None:intergenic |
CACGCAGATATCGTCATCTC+TGG | 0.468968 | 8.3:-47887408 | MS.gene007875:CDS |
TGTGGAATTAGCACAATCTT+CGG | 0.469907 | 8.3:-47886273 | MS.gene007875:CDS |
CTTGGAGGAGAATGAGTAAA+GGG | 0.471592 | 8.3:+47885910 | None:intergenic |
TTACGCTCCTGAAAATGAAT+CGG | 0.471616 | 8.3:-47885937 | MS.gene007875:CDS |
GCAGCGGACCAGCGGCAATA+CGG | 0.472996 | 8.3:+47887137 | None:intergenic |
GGTGAGTTTCAAACTCTTCA+GGG | 0.475730 | 8.3:+47886097 | None:intergenic |
TCTGTGGATATCCTTCTCTC+AGG | 0.483856 | 8.3:-47886191 | MS.gene007875:CDS |
TCGGAGTTAGCGCCGAGGAT+GGG | 0.485175 | 8.3:+47887346 | None:intergenic |
TTTGCTAATGATACTGCGGT+TGG | 0.488727 | 8.3:-47885999 | MS.gene007875:CDS |
ATGTAATTCTGGTGAGGCTA+AGG | 0.489727 | 8.3:+47886021 | None:intergenic |
ATTCTCCTCCAAGCTCTCAC+TGG | 0.490637 | 8.3:-47885900 | MS.gene007875:CDS |
GCCCTAAGTTACTCTCCATC+AGG | 0.491235 | 8.3:-47887042 | MS.gene007875:intron |
TACCTGATGGAGAGTAACTT+AGG | 0.497791 | 8.3:+47887040 | None:intergenic |
ACCGACATTCCATCGACGTT+CGG | 0.497996 | 8.3:-47887279 | MS.gene007875:CDS |
ATGCACATTAAAGGGTATCA+AGG | 0.500704 | 8.3:-47885418 | MS.gene007875:CDS |
ACGCATCTTCCGAACGTCGA+TGG | 0.503115 | 8.3:+47887270 | None:intergenic |
GCTTGGATCCGTATTGCCGC+TGG | 0.505305 | 8.3:-47887145 | MS.gene007875:CDS |
TATGACTCGTGGGTCCGATC+CGG | 0.513182 | 8.3:-47887196 | MS.gene007875:CDS |
TGCCGCTGGTCCGCTGCTTG+AGG | 0.514857 | 8.3:-47887131 | MS.gene007875:CDS |
ATGAGAGCACAGTGAGAGGA+AGG | 0.515257 | 8.3:+47887065 | None:intergenic |
ATTATAAGAGCTTGAAGCAT+AGG | 0.517782 | 8.3:+47885616 | None:intergenic |
ACCAAATGAAAGTGGCTTGG+CGG | 0.520565 | 8.3:-47885488 | MS.gene007875:CDS |
GGTAGATGGAACACGAAGCT+TGG | 0.523289 | 8.3:+47886118 | None:intergenic |
CTTGGACCAAAAGAAGAAGT+GGG | 0.532722 | 8.3:-47885314 | MS.gene007875:CDS |
GACGATATCTGCGTGAGACG+AGG | 0.533696 | 8.3:+47887416 | None:intergenic |
GCTTGGAGGAGAATGAGTAA+AGG | 0.533811 | 8.3:+47885909 | None:intergenic |
TCTTGGACCAAAAGAAGAAG+TGG | 0.534181 | 8.3:-47885315 | MS.gene007875:CDS |
GAGCACAGCGTTGACGAAAA+CGG | 0.534757 | 8.3:+47887306 | None:intergenic |
ACCTGATGGAGAGTAACTTA+GGG | 0.541023 | 8.3:+47887041 | None:intergenic |
TCAAGGAGATTCTAGTGAGA+TGG | 0.541910 | 8.3:-47885401 | MS.gene007875:CDS |
TAGCTCAGTCAAATGTAACT+TGG | 0.544825 | 8.3:+47885236 | None:intergenic |
TGCTTACTTGTATGACTCGT+GGG | 0.545376 | 8.3:-47887206 | MS.gene007875:CDS |
ATCACCAAATGAAAGTGGCT+TGG | 0.546941 | 8.3:-47885491 | MS.gene007875:CDS |
CCGTAAACCGGGCACCGGAT+CGG | 0.552403 | 8.3:+47887182 | None:intergenic |
ATGCTTACTTGTATGACTCG+TGG | 0.559289 | 8.3:-47887207 | MS.gene007875:CDS |
CGGAAGATGCGTCTCTCATG+TGG | 0.561584 | 8.3:-47887259 | MS.gene007875:CDS |
TGCAAGAAGAGACTGGTAGA+TGG | 0.565627 | 8.3:-47885754 | MS.gene007875:intron |
TTCCTCAAGCAGCGGACCAG+CGG | 0.567875 | 8.3:+47887129 | None:intergenic |
CTGCCCAATCTTAGAAACCC+TGG | 0.570258 | 8.3:-47886168 | MS.gene007875:CDS |
TTCGGAGTTAGCGCCGAGGA+TGG | 0.571993 | 8.3:+47887345 | None:intergenic |
TAATTCCAGTGAGAGCTTGG+AGG | 0.575459 | 8.3:+47885895 | None:intergenic |
ACGATATCTGCGTGAGACGA+GGG | 0.579271 | 8.3:+47887417 | None:intergenic |
TGGCAGACAGCAGAGCCCCT+CGG | 0.585541 | 8.3:+47885256 | None:intergenic |
GATACATCACCAAATGAAAG+TGG | 0.589613 | 8.3:-47885496 | MS.gene007875:CDS |
CTCACCGTTGAGAATGACAT+TGG | 0.590348 | 8.3:-47886080 | MS.gene007875:CDS |
GACAGACATTTCCGTAAACC+GGG | 0.593014 | 8.3:+47887171 | None:intergenic |
TACGACTATAATCCCATCCT+CGG | 0.598194 | 8.3:-47887358 | MS.gene007875:CDS |
CATTTCCGTAAACCGGGCAC+CGG | 0.598509 | 8.3:+47887177 | None:intergenic |
AGCTCCAATGTCATTCTCAA+CGG | 0.598655 | 8.3:+47886076 | None:intergenic |
GTACAGAAAAGTGTCGAAAG+TGG | 0.605540 | 8.3:+47885657 | None:intergenic |
TACATTTGCTAATGATACTG+CGG | 0.607093 | 8.3:-47886003 | MS.gene007875:CDS |
GAGTCATACAAGTAAGCATG+TGG | 0.610775 | 8.3:+47887211 | None:intergenic |
AGATTGGGCAGCCTGAGAGA+AGG | 0.617228 | 8.3:+47886180 | None:intergenic |
TACAGAAAAGTGTCGAAAGT+GGG | 0.617739 | 8.3:+47885658 | None:intergenic |
GGGCATGAGAGCACAGTGAG+AGG | 0.622251 | 8.3:+47887061 | None:intergenic |
TCCGAACGTCGATGGAATGT+CGG | 0.622696 | 8.3:+47887278 | None:intergenic |
ATTGCGATGTTATACAGCAA+AGG | 0.632025 | 8.3:-47885862 | MS.gene007875:intron |
AGATTCATTTCCTCAAGCAG+CGG | 0.637904 | 8.3:+47887121 | None:intergenic |
GGGAGAAAAGGAGAGTTCCA+GGG | 0.642523 | 8.3:+47886151 | None:intergenic |
TAGCAAATGTAATTCTGGTG+AGG | 0.648687 | 8.3:+47886015 | None:intergenic |
TAGAAAATTTGCTAACACAA+CGG | 0.648999 | 8.3:+47885284 | None:intergenic |
AGAGCACAGTGAGAGGAAGG+CGG | 0.661747 | 8.3:+47887068 | None:intergenic |
TCTCTGCGGTGATATCGTTG+TGG | 0.661941 | 8.3:-47886291 | MS.gene007875:CDS |
TCTTATAATTCAGAACGACA+AGG | 0.672226 | 8.3:-47885602 | MS.gene007875:intron |
TAACGTGGATGTGAATTCTG+TGG | 0.682540 | 8.3:-47886207 | MS.gene007875:CDS |
GAAACTAGATATTGGTAACG+TGG | 0.690783 | 8.3:-47886222 | MS.gene007875:CDS |
AGTCATACAAGTAAGCATGT+GGG | 0.710464 | 8.3:+47887212 | None:intergenic |
TGTAATGTACTCAGTCTCTG+CGG | 0.744171 | 8.3:-47886305 | MS.gene007875:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTCGAAAAATTTATAAT+AGG | + | chr8.3:47886937-47886956 | None:intergenic | 10.0% |
!! | TTTAAATGAATTGTATAATT+GGG | - | chr8.3:47886016-47886035 | MS.gene007875:CDS | 10.0% |
!! | ACATGTTAAGAAATTTAAAA+TGG | - | chr8.3:47885799-47885818 | MS.gene007875:intron | 15.0% |
!! | GTTTAAATGAATTGTATAAT+TGG | - | chr8.3:47886015-47886034 | MS.gene007875:CDS | 15.0% |
!! | TTAAAGAAAATGATTATTTC+TGG | - | chr8.3:47887318-47887337 | MS.gene007875:CDS | 15.0% |
!! | TAAAATGGTAAGTTTGTATT+TGG | - | chr8.3:47885814-47885833 | MS.gene007875:intron | 20.0% |
!! | TTAAAATGTGATATGATAGA+TGG | - | chr8.3:47885700-47885719 | MS.gene007875:CDS | 20.0% |
!!! | TTTTTCGAATATACATTTTC+CGG | - | chr8.3:47886945-47886964 | MS.gene007875:intron | 20.0% |
! | AAAATTAAGAAGATACCTGA+TGG | + | chr8.3:47885637-47885656 | None:intergenic | 25.0% |
! | ATCATTAGCAAATGTAATTC+TGG | + | chr8.3:47886654-47886673 | None:intergenic | 25.0% |
! | TACTAAACCAAATCATACAT+CGG | + | chr8.3:47886199-47886218 | None:intergenic | 25.0% |
! | TAGTTAAATCCCAGTATAAT+TGG | + | chr8.3:47885956-47885975 | None:intergenic | 25.0% |
!! | ACAATATTTAAAGTCGAAAG+CGG | + | chr8.3:47886065-47886084 | None:intergenic | 25.0% |
!!! | TAGAAAATTTGCTAACACAA+CGG | + | chr8.3:47887380-47887399 | None:intergenic | 25.0% |
AAATCCCAGTATAATTGGAA+GGG | + | chr8.3:47885951-47885970 | None:intergenic | 30.0% | |
AAGACGATGAAACTAGATAT+TGG | - | chr8.3:47886431-47886450 | MS.gene007875:intron | 30.0% | |
AGTTTCATCGTCTTTAATGA+AGG | + | chr8.3:47886425-47886444 | None:intergenic | 30.0% | |
ATACCCTTTAATGTGCATAT+TGG | + | chr8.3:47887241-47887260 | None:intergenic | 30.0% | |
ATACGTAAACAGATGAAGAA+GGG | - | chr8.3:47886218-47886237 | MS.gene007875:CDS | 30.0% | |
ATTATAAGAGCTTGAAGCAT+AGG | + | chr8.3:47887048-47887067 | None:intergenic | 30.0% | |
TAAATCCCAGTATAATTGGA+AGG | + | chr8.3:47885952-47885971 | None:intergenic | 30.0% | |
TATACGTAAACAGATGAAGA+AGG | - | chr8.3:47886217-47886236 | MS.gene007875:CDS | 30.0% | |
TCTTATAATTCAGAACGACA+AGG | - | chr8.3:47887059-47887078 | MS.gene007875:CDS | 30.0% | |
TGTAGTAAATGGTGAAATTC+CGG | + | chr8.3:47886967-47886986 | None:intergenic | 30.0% | |
TGTCCAATATGCACATTAAA+GGG | - | chr8.3:47887235-47887254 | MS.gene007875:CDS | 30.0% | |
TTGTCCAATATGCACATTAA+AGG | - | chr8.3:47887234-47887253 | MS.gene007875:CDS | 30.0% | |
! | AAATTTTCTAATATGCCGAG+GGG | - | chr8.3:47887390-47887409 | MS.gene007875:CDS | 30.0% |
! | CAAATTTTCTAATATGCCGA+GGG | - | chr8.3:47887389-47887408 | MS.gene007875:CDS | 30.0% |
! | TACATTTGCTAATGATACTG+CGG | - | chr8.3:47886658-47886677 | MS.gene007875:intron | 30.0% |
! | TGTGAGTATATCTAAAGCTT+TGG | - | chr8.3:47887084-47887103 | MS.gene007875:CDS | 30.0% |
!!! | GATTATTTCTGGTGTTTTCT+TGG | - | chr8.3:47887329-47887348 | MS.gene007875:CDS | 30.0% |
ACAAACCCTTCCAATTATAC+TGG | - | chr8.3:47885943-47885962 | MS.gene007875:CDS | 35.0% | |
AGACAGTTAGGAACAGTATT+AGG | + | chr8.3:47887204-47887223 | None:intergenic | 35.0% | |
AGTCATACAAGTAAGCATGT+GGG | + | chr8.3:47885452-47885471 | None:intergenic | 35.0% | |
ATTGCGATGTTATACAGCAA+AGG | - | chr8.3:47886799-47886818 | MS.gene007875:intron | 35.0% | |
CAAACCCTTCCAATTATACT+GGG | - | chr8.3:47885944-47885963 | MS.gene007875:CDS | 35.0% | |
CAAGAATCCGATGTATGATT+TGG | - | chr8.3:47886189-47886208 | MS.gene007875:CDS | 35.0% | |
CGTAGTAGAAGTTGAATGAT+TGG | + | chr8.3:47885287-47885306 | None:intergenic | 35.0% | |
GAGTGACATTACTTTCTAGA+AGG | - | chr8.3:47886115-47886134 | MS.gene007875:CDS | 35.0% | |
GATACATCACCAAATGAAAG+TGG | - | chr8.3:47887165-47887184 | MS.gene007875:CDS | 35.0% | |
TAGCAAATGTAATTCTGGTG+AGG | + | chr8.3:47886649-47886668 | None:intergenic | 35.0% | |
TGTGGAATTAGCACAATCTT+CGG | - | chr8.3:47886388-47886407 | MS.gene007875:intron | 35.0% | |
TTACGCTCCTGAAAATGAAT+CGG | - | chr8.3:47886724-47886743 | MS.gene007875:intron | 35.0% | |
! | ACTTTCGACACTTTTCTGTA+CGG | - | chr8.3:47887006-47887025 | MS.gene007875:intron | 35.0% |
! | AGGCTAAGGTATTTGAGATT+GGG | + | chr8.3:47886629-47886648 | None:intergenic | 35.0% |
! | CTCTCTTTTGTTGCATGATT+TGG | - | chr8.3:47886294-47886313 | MS.gene007875:CDS | 35.0% |
! | CTTTTTACATCTGAGGATCA+TGG | - | chr8.3:47885567-47885586 | MS.gene007875:intron | 35.0% |
! | GCAAATTTTCTAATATGCCG+AGG | - | chr8.3:47887388-47887407 | MS.gene007875:CDS | 35.0% |
! | TCTTGCTCTTTTTACATCTG+AGG | - | chr8.3:47885560-47885579 | MS.gene007875:intron | 35.0% |
!! | ATGCACATTAAAGGGTATCA+AGG | - | chr8.3:47887243-47887262 | MS.gene007875:CDS | 35.0% |
!! | GAAACTAGATATTGGTAACG+TGG | - | chr8.3:47886439-47886458 | MS.gene007875:intron | 35.0% |
!! | TACAGAAAAGTGTCGAAAGT+GGG | + | chr8.3:47887006-47887025 | None:intergenic | 35.0% |
!! | TGAGCTCTAGATGTAGTAAA+TGG | + | chr8.3:47886978-47886997 | None:intergenic | 35.0% |
AAGTGAGACACAAGACAGTT+AGG | + | chr8.3:47887216-47887235 | None:intergenic | 40.0% | |
ACCTGATGGAGAGTAACTTA+GGG | + | chr8.3:47885623-47885642 | None:intergenic | 40.0% | |
AGATTCATTTCCTCAAGCAG+CGG | + | chr8.3:47885543-47885562 | None:intergenic | 40.0% | |
AGCTCCAATGTCATTCTCAA+CGG | + | chr8.3:47886588-47886607 | None:intergenic | 40.0% | |
ATCACCAAATGAAAGTGGCT+TGG | - | chr8.3:47887170-47887189 | MS.gene007875:CDS | 40.0% | |
ATGCTTACTTGTATGACTCG+TGG | - | chr8.3:47885454-47885473 | MS.gene007875:CDS | 40.0% | |
ATGTAATTCTGGTGAGGCTA+AGG | + | chr8.3:47886643-47886662 | None:intergenic | 40.0% | |
CTTGGACCAAAAGAAGAAGT+GGG | - | chr8.3:47887347-47887366 | MS.gene007875:CDS | 40.0% | |
CTTGGAGGAGAATGAGTAAA+GGG | + | chr8.3:47886754-47886773 | None:intergenic | 40.0% | |
GAGTCATACAAGTAAGCATG+TGG | + | chr8.3:47885453-47885472 | None:intergenic | 40.0% | |
GGTGAGTTTCAAACTCTTCA+GGG | + | chr8.3:47886567-47886586 | None:intergenic | 40.0% | |
GTTTAATTCCAGTGAGAGCT+TGG | + | chr8.3:47886772-47886791 | None:intergenic | 40.0% | |
TAACGTGGATGTGAATTCTG+TGG | - | chr8.3:47886454-47886473 | MS.gene007875:intron | 40.0% | |
TACCTGATGGAGAGTAACTT+AGG | + | chr8.3:47885624-47885643 | None:intergenic | 40.0% | |
TACGACTATAATCCCATCCT+CGG | - | chr8.3:47885303-47885322 | MS.gene007875:CDS | 40.0% | |
TCAAGGAGATTCTAGTGAGA+TGG | - | chr8.3:47887260-47887279 | MS.gene007875:CDS | 40.0% | |
TCTTGGACCAAAAGAAGAAG+TGG | - | chr8.3:47887346-47887365 | MS.gene007875:CDS | 40.0% | |
TGCTTACTTGTATGACTCGT+GGG | - | chr8.3:47885455-47885474 | MS.gene007875:CDS | 40.0% | |
TGTAATGTACTCAGTCTCTG+CGG | - | chr8.3:47886356-47886375 | MS.gene007875:intron | 40.0% | |
TTCAAACTCTTCAGGGTAGA+TGG | + | chr8.3:47886560-47886579 | None:intergenic | 40.0% | |
TTGCTAATGATACTGCGGTT+GGG | - | chr8.3:47886663-47886682 | MS.gene007875:intron | 40.0% | |
TTTGCTAATGATACTGCGGT+TGG | - | chr8.3:47886662-47886681 | MS.gene007875:intron | 40.0% | |
! | ACTTCTCCCACTTCTTCTTT+TGG | + | chr8.3:47887356-47887375 | None:intergenic | 40.0% |
! | GAGGCTAAGGTATTTGAGAT+TGG | + | chr8.3:47886630-47886649 | None:intergenic | 40.0% |
! | GCTAGCTATGTTTTGCAGAA+TGG | - | chr8.3:47887288-47887307 | MS.gene007875:CDS | 40.0% |
! | GTTTGTTTGTTAGCGTAGCA+TGG | - | chr8.3:47886267-47886286 | MS.gene007875:CDS | 40.0% |
!! | AGTTCCAGGGTTTCTAAGAT+TGG | + | chr8.3:47886500-47886519 | None:intergenic | 40.0% |
!! | GTACAGAAAAGTGTCGAAAG+TGG | + | chr8.3:47887007-47887026 | None:intergenic | 40.0% |
!! | GTTCCAGGGTTTCTAAGATT+GGG | + | chr8.3:47886499-47886518 | None:intergenic | 40.0% |
!! | TCATTTGGTGATGTATCCTG+CGG | + | chr8.3:47887162-47887181 | None:intergenic | 40.0% |
AAGTAAGCATGTGGGTCTTC+GGG | + | chr8.3:47885444-47885463 | None:intergenic | 45.0% | |
ATGTATCCTGCGGGCAAATA+GGG | + | chr8.3:47887152-47887171 | None:intergenic | 45.0% | |
CAAGTAAGCATGTGGGTCTT+CGG | + | chr8.3:47885445-47885464 | None:intergenic | 45.0% | |
CGACAGACATTTCCGTAAAC+CGG | + | chr8.3:47885494-47885513 | None:intergenic | 45.0% | |
CGGTGAGTTTCAAACTCTTC+AGG | + | chr8.3:47886568-47886587 | None:intergenic | 45.0% | |
CTCACCGTTGAGAATGACAT+TGG | - | chr8.3:47886581-47886600 | MS.gene007875:intron | 45.0% | |
GACAGACATTTCCGTAAACC+GGG | + | chr8.3:47885493-47885512 | None:intergenic | 45.0% | |
GCTTGGAGGAGAATGAGTAA+AGG | + | chr8.3:47886755-47886774 | None:intergenic | 45.0% | |
TAATTCCAGTGAGAGCTTGG+AGG | + | chr8.3:47886769-47886788 | None:intergenic | 45.0% | |
TCTGTGGATATCCTTCTCTC+AGG | - | chr8.3:47886470-47886489 | MS.gene007875:intron | 45.0% | |
TGCAAGAAGAGACTGGTAGA+TGG | - | chr8.3:47886907-47886926 | MS.gene007875:intron | 45.0% | |
TGCTAATGATACTGCGGTTG+GGG | - | chr8.3:47886664-47886683 | MS.gene007875:intron | 45.0% | |
! | ACCAAATGAAAGTGGCTTGG+CGG | - | chr8.3:47887173-47887192 | MS.gene007875:CDS | 45.0% |
! | CTCCTTTTCTCCCATATCTC+TGG | - | chr8.3:47886520-47886539 | MS.gene007875:intron | 45.0% |
!! | CATTTGGTGATGTATCCTGC+GGG | + | chr8.3:47887161-47887180 | None:intergenic | 45.0% |
!! | GGCGAAGCGTTTGAAGTTTT+CGG | + | chr8.3:47885337-47885356 | None:intergenic | 45.0% |
!! | GGGTCAACCGATTCATTTTC+AGG | + | chr8.3:47886734-47886753 | None:intergenic | 45.0% |
!!! | ATAACTTTTTAATAAATAAT+TGG | - | chr8.3:47885862-47885881 | MS.gene007875:intron | 5.0% |
ACCGACATTCCATCGACGTT+CGG | - | chr8.3:47885382-47885401 | MS.gene007875:CDS | 50.0% | |
ACGAAGCTTGGCCAGAGATA+TGG | + | chr8.3:47886534-47886553 | None:intergenic | 50.0% | |
ACGATATCTGCGTGAGACGA+GGG | + | chr8.3:47885247-47885266 | None:intergenic | 50.0% | |
ATTCTCCTCCAAGCTCTCAC+TGG | - | chr8.3:47886761-47886780 | MS.gene007875:intron | 50.0% | |
CACGCAGATATCGTCATCTC+TGG | - | chr8.3:47885253-47885272 | MS.gene007875:CDS | 50.0% | |
CGAAGCTTGGCCAGAGATAT+GGG | + | chr8.3:47886533-47886552 | None:intergenic | 50.0% | |
CGGAAATGTCTGTCGATGCT+TGG | - | chr8.3:47885499-47885518 | MS.gene007875:CDS | 50.0% | |
CTGCCCAATCTTAGAAACCC+TGG | - | chr8.3:47886493-47886512 | MS.gene007875:intron | 50.0% | |
GATGTATCCTGCGGGCAAAT+AGG | + | chr8.3:47887153-47887172 | None:intergenic | 50.0% | |
GCCCTAAGTTACTCTCCATC+AGG | - | chr8.3:47885619-47885638 | MS.gene007875:CDS | 50.0% | |
GGCCAGAGATATGGGAGAAA+AGG | + | chr8.3:47886525-47886544 | None:intergenic | 50.0% | |
GGGAGAAAAGGAGAGTTCCA+GGG | + | chr8.3:47886513-47886532 | None:intergenic | 50.0% | |
GGTAGATGGAACACGAAGCT+TGG | + | chr8.3:47886546-47886565 | None:intergenic | 50.0% | |
GTGTACGTGCAAGAAGAGAC+TGG | - | chr8.3:47886900-47886919 | MS.gene007875:intron | 50.0% | |
TCCGAACGTCGATGGAATGT+CGG | + | chr8.3:47885386-47885405 | None:intergenic | 50.0% | |
TCTCTGCGGTGATATCGTTG+TGG | - | chr8.3:47886370-47886389 | MS.gene007875:intron | 50.0% | |
TGGGAGAAAAGGAGAGTTCC+AGG | + | chr8.3:47886514-47886533 | None:intergenic | 50.0% | |
TGTATCCTGCGGGCAAATAG+GGG | + | chr8.3:47887151-47887170 | None:intergenic | 50.0% | |
! | ACCGCCAAGCCACTTTCATT+TGG | + | chr8.3:47887177-47887196 | None:intergenic | 50.0% |
! | ATGAGAGCACAGTGAGAGGA+AGG | + | chr8.3:47885599-47885618 | None:intergenic | 50.0% |
!! | GAGCACAGCGTTGACGAAAA+CGG | + | chr8.3:47885358-47885377 | None:intergenic | 50.0% |
AATTGCCCCTATTTGCCCGC+AGG | - | chr8.3:47887143-47887162 | MS.gene007875:CDS | 55.0% | |
ACGCATCTTCCGAACGTCGA+TGG | + | chr8.3:47885394-47885413 | None:intergenic | 55.0% | |
AGAGCACAGTGAGAGGAAGG+CGG | + | chr8.3:47885596-47885615 | None:intergenic | 55.0% | |
AGATTGGGCAGCCTGAGAGA+AGG | + | chr8.3:47886484-47886503 | None:intergenic | 55.0% | |
CATTTCCGTAAACCGGGCAC+CGG | + | chr8.3:47885487-47885506 | None:intergenic | 55.0% | |
CGGAAGATGCGTCTCTCATG+TGG | - | chr8.3:47885402-47885421 | MS.gene007875:CDS | 55.0% | |
GACGATATCTGCGTGAGACG+AGG | + | chr8.3:47885248-47885267 | None:intergenic | 55.0% | |
TATGACTCGTGGGTCCGATC+CGG | - | chr8.3:47885465-47885484 | MS.gene007875:CDS | 55.0% | |
! | AGTTTTCGGAGTTAGCGCCG+AGG | + | chr8.3:47885323-47885342 | None:intergenic | 55.0% |
GCTTGGATCCGTATTGCCGC+TGG | - | chr8.3:47885516-47885535 | MS.gene007875:intron | 60.0% | |
TTCCTCAAGCAGCGGACCAG+CGG | + | chr8.3:47885535-47885554 | None:intergenic | 60.0% | |
! | AGCTTTGGTGTGTGCGTGCG+TGG | - | chr8.3:47887099-47887118 | MS.gene007875:CDS | 60.0% |
! | GGGCATGAGAGCACAGTGAG+AGG | + | chr8.3:47885603-47885622 | None:intergenic | 60.0% |
! | TCGGAGTTAGCGCCGAGGAT+GGG | + | chr8.3:47885318-47885337 | None:intergenic | 60.0% |
! | TTCGGAGTTAGCGCCGAGGA+TGG | + | chr8.3:47885319-47885338 | None:intergenic | 60.0% |
CCGATCCGGTGCCCGGTTTA+CGG | - | chr8.3:47885479-47885498 | MS.gene007875:CDS | 65.0% | |
GCAGCGGACCAGCGGCAATA+CGG | + | chr8.3:47885527-47885546 | None:intergenic | 65.0% | |
TGGCAGACAGCAGAGCCCCT+CGG | + | chr8.3:47887408-47887427 | None:intergenic | 65.0% | |
!! | CCGTAAACCGGGCACCGGAT+CGG | + | chr8.3:47885482-47885501 | None:intergenic | 65.0% |
TGCCGCTGGTCCGCTGCTTG+AGG | - | chr8.3:47885530-47885549 | MS.gene007875:intron | 70.0% | |
CGTGGGTCCGATCCGGTGCC+CGG | - | chr8.3:47885472-47885491 | MS.gene007875:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 47885240 | 47887443 | 47885240 | ID=MS.gene007875 |
chr8.3 | mRNA | 47885240 | 47887443 | 47885240 | ID=MS.gene007875.t1;Parent=MS.gene007875 |
chr8.3 | exon | 47887043 | 47887443 | 47887043 | ID=MS.gene007875.t1.exon1;Parent=MS.gene007875.t1 |
chr8.3 | CDS | 47887043 | 47887443 | 47887043 | ID=cds.MS.gene007875.t1;Parent=MS.gene007875.t1 |
chr8.3 | exon | 47885863 | 47886313 | 47885863 | ID=MS.gene007875.t1.exon2;Parent=MS.gene007875.t1 |
chr8.3 | CDS | 47885863 | 47886313 | 47885863 | ID=cds.MS.gene007875.t1;Parent=MS.gene007875.t1 |
chr8.3 | exon | 47885603 | 47885767 | 47885603 | ID=MS.gene007875.t1.exon3;Parent=MS.gene007875.t1 |
chr8.3 | CDS | 47885603 | 47885767 | 47885603 | ID=cds.MS.gene007875.t1;Parent=MS.gene007875.t1 |
chr8.3 | exon | 47885240 | 47885518 | 47885240 | ID=MS.gene007875.t1.exon4;Parent=MS.gene007875.t1 |
chr8.3 | CDS | 47885240 | 47885518 | 47885240 | ID=cds.MS.gene007875.t1;Parent=MS.gene007875.t1 |
Gene Sequence |
Protein sequence |