AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022915

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022915.t1 MTR_7g115270 64.352 216 73 2 4 215 133 348 2.18e-84 256
MS.gene022915.t1 MTR_7g056420 67.580 219 42 3 1 215 118 311 7.76e-81 261
MS.gene022915.t1 MTR_7g056430 67.580 219 42 3 1 215 118 311 1.46e-80 261
MS.gene022915.t1 MTR_5g013500 54.639 194 82 3 27 214 116 309 5.55e-63 200
MS.gene022915.t1 MTR_7g056433 52.913 206 92 2 5 210 130 330 5.56e-61 195
MS.gene022915.t1 MTR_7g056417 56.442 163 59 3 1 156 1 158 1.19e-49 159
MS.gene022915.t1 MTR_7g098570 41.860 215 111 7 5 215 135 339 1.64e-38 139
MS.gene022915.t1 MTR_7g098510 40.909 220 108 9 4 215 132 337 6.47e-35 127
MS.gene022915.t1 MTR_3g036250 38.605 215 104 7 7 215 124 316 2.70e-34 125
MS.gene022915.t1 MTR_7g034120 39.806 206 108 8 10 212 64 256 1.21e-33 122
MS.gene022915.t1 MTR_3g040700 39.151 212 106 7 7 215 162 353 5.28e-33 123
MS.gene022915.t1 MTR_7g098480 39.352 216 115 8 4 215 132 335 4.79e-32 121
MS.gene022915.t1 MTR_7g033990 43.541 209 97 8 10 213 139 331 1.95e-31 119
MS.gene022915.t1 MTR_7g032370 36.019 211 108 6 7 212 108 296 2.57e-30 114
MS.gene022915.t1 MTR_7g007080 36.967 211 115 7 7 211 129 327 1.12e-29 114
MS.gene022915.t1 MTR_3g023630 35.455 220 123 8 1 215 119 324 1.60e-29 113
MS.gene022915.t1 MTR_7g033915 40.865 208 88 9 10 213 137 313 1.58e-28 110
MS.gene022915.t1 MTR_5g008950 33.645 214 124 8 4 212 110 310 4.36e-28 109
MS.gene022915.t1 MTR_1g041245 38.889 216 108 9 7 212 129 330 6.85e-28 108
MS.gene022915.t1 MTR_3g087260 38.785 214 111 8 6 212 200 400 2.23e-27 108
MS.gene022915.t1 MTR_3g087260 38.614 101 59 2 5 104 112 210 1.07e-11 63.5
MS.gene022915.t1 MTR_7g032380 35.238 210 93 8 7 212 130 300 2.81e-26 103
MS.gene022915.t1 MTR_3g082890 36.771 223 120 6 7 212 212 430 5.92e-26 104
MS.gene022915.t1 MTR_1g107385 35.780 218 120 8 7 215 166 372 9.21e-26 103
MS.gene022915.t1 MTR_5g008920 34.135 208 125 7 6 211 128 325 1.81e-25 102
MS.gene022915.t1 MTR_0492s0020 35.681 213 110 8 7 211 199 392 6.42e-25 101
MS.gene022915.t1 MTR_0543s0010 35.681 213 110 8 7 211 199 392 7.87e-25 101
MS.gene022915.t1 MTR_2g008320 33.654 208 128 5 6 211 172 371 9.75e-25 100
MS.gene022915.t1 MTR_2g007500 31.982 222 122 6 7 211 121 330 8.09e-24 97.1
MS.gene022915.t1 MTR_2g007450 31.696 224 124 7 7 210 152 366 2.04e-23 97.1
MS.gene022915.t1 MTR_3g108560 36.893 206 118 5 11 212 135 332 2.79e-23 96.3
MS.gene022915.t1 MTR_3g107100 35.945 217 124 8 1 212 126 332 3.89e-23 96.3
MS.gene022915.t1 MTR_6g045333 33.790 219 130 6 5 215 181 392 8.89e-23 95.5
MS.gene022915.t1 MTR_7g056020 35.377 212 107 7 11 211 124 316 2.71e-22 94.7
MS.gene022915.t1 MTR_5g083890 33.937 221 123 8 7 215 142 351 3.16e-22 94.4
MS.gene022915.t1 MTR_3g071850 31.081 222 132 4 5 215 144 355 3.84e-22 94.4
MS.gene022915.t1 MTR_7g088260 33.175 211 128 5 5 212 206 406 4.22e-22 93.6
MS.gene022915.t1 MTR_5g045170 31.797 217 132 5 5 215 131 337 5.40e-22 92.8
MS.gene022915.t1 MTR_3g105060 33.019 212 122 8 5 215 131 323 6.71e-22 92.4
MS.gene022915.t1 MTR_7g034115 34.742 213 118 8 7 212 129 327 7.81e-22 92.4
MS.gene022915.t1 MTR_3g026920 30.531 226 114 7 2 211 159 357 1.64e-21 91.7
MS.gene022915.t1 MTR_1g053025 29.018 224 138 6 1 212 123 337 2.27e-21 91.3
MS.gene022915.t1 MTR_5g007410 29.817 218 140 5 5 215 143 354 4.31e-21 90.9
MS.gene022915.t1 MTR_2g008310 32.692 208 129 6 6 211 118 316 5.22e-21 90.1
MS.gene022915.t1 MTR_3g109982 36.667 210 116 8 7 211 220 417 7.87e-21 90.5
MS.gene022915.t1 MTR_3g107120 34.135 208 124 6 7 211 142 339 3.58e-20 87.8
MS.gene022915.t1 MTR_7g056447 62.687 67 25 0 1 67 119 185 4.08e-20 86.7
MS.gene022915.t1 MTR_3g082890 31.923 260 119 7 7 212 132 387 4.90e-20 87.8
MS.gene022915.t1 MTR_7g081290 43.443 122 61 4 98 212 84 204 1.24e-19 84.3
MS.gene022915.t1 MTR_3g108150 34.842 221 117 8 3 211 124 329 1.27e-19 86.3
MS.gene022915.t1 MTR_3g467400 32.420 219 103 9 5 215 132 313 2.08e-19 85.5
MS.gene022915.t1 MTR_7g075820 28.505 214 136 6 7 215 142 343 2.19e-19 85.5
MS.gene022915.t1 MTR_7g056277 33.168 202 118 8 11 211 385 570 1.35e-18 84.0
MS.gene022915.t1 MTR_7g060470 31.222 221 128 9 8 212 126 338 1.37e-18 83.2
MS.gene022915.t1 MTR_0009s0080 30.275 218 138 5 5 215 136 346 1.38e-18 83.6
MS.gene022915.t1 MTR_5g073370 32.367 207 125 7 5 208 126 320 1.84e-18 82.8
MS.gene022915.t1 MTR_7g056287 33.168 202 118 8 11 211 129 314 1.90e-18 82.8
MS.gene022915.t1 MTR_7g114710 32.850 207 93 8 15 212 141 310 1.97e-18 82.8
MS.gene022915.t1 MTR_3g107160 31.905 210 116 7 7 206 134 326 3.01e-18 82.4
MS.gene022915.t1 MTR_4g098590 32.883 222 113 9 7 211 127 329 5.55e-18 81.6
MS.gene022915.t1 MTR_2g007400 32.547 212 121 8 10 211 148 347 8.21e-18 81.3
MS.gene022915.t1 MTR_6g022500 28.638 213 133 5 6 212 220 419 1.04e-17 81.3
MS.gene022915.t1 MTR_7g026500 30.876 217 127 9 4 212 139 340 1.80e-17 80.1
MS.gene022915.t1 MTR_5g012840 30.769 208 92 6 10 215 109 266 2.27e-17 79.3
MS.gene022915.t1 MTR_4g080610 33.333 186 108 5 35 212 124 301 9.74e-17 77.8
MS.gene022915.t1 MTR_7g083740 31.606 193 107 7 29 211 135 312 1.13e-16 77.8
MS.gene022915.t1 MTR_3g115430 56.452 62 26 1 151 212 11 71 1.36e-16 73.2
MS.gene022915.t1 MTR_7g034110 47.191 89 39 3 132 215 206 291 1.95e-16 77.0
MS.gene022915.t1 MTR_1g108820 29.907 214 127 7 5 206 121 323 3.39e-16 76.6
MS.gene022915.t1 MTR_3g099830 29.954 217 124 8 7 211 118 318 3.97e-16 76.3
MS.gene022915.t1 MTR_1g108800 32.569 218 114 7 1 206 84 280 1.70e-15 74.3
MS.gene022915.t1 MTR_1g085120 29.665 209 130 6 11 212 216 414 1.80e-15 74.7
MS.gene022915.t1 MTR_1g085120 29.665 209 130 6 11 212 291 489 2.03e-15 74.7
MS.gene022915.t1 MTR_3g108560 38.150 173 91 6 11 177 135 297 2.32e-15 73.6
MS.gene022915.t1 MTR_2g020180 32.749 171 88 5 55 212 5 161 2.65e-15 72.0
MS.gene022915.t1 MTR_7g055943 31.944 216 126 7 6 214 159 360 4.82e-15 73.6
MS.gene022915.t1 MTR_5g073420 29.493 217 125 8 1 212 127 320 2.71e-14 71.2
MS.gene022915.t1 MTR_5g063950 27.358 212 138 6 10 215 107 308 4.02e-14 70.5
MS.gene022915.t1 MTR_5g073340 28.571 210 134 7 4 205 99 300 4.51e-14 70.1
MS.gene022915.t1 MTR_4g039440 30.952 210 135 6 6 211 148 351 6.24e-14 70.1
MS.gene022915.t1 MTR_5g058100 32.020 203 119 8 10 206 131 320 9.43e-14 69.7
MS.gene022915.t1 MTR_2g007360 28.829 222 112 8 16 211 115 316 1.32e-13 68.9
MS.gene022915.t1 MTR_6g013160 31.980 197 107 9 5 177 159 352 1.42e-13 68.9
MS.gene022915.t1 MTR_5g031970 29.954 217 112 8 5 215 120 302 2.45e-13 68.2
MS.gene022915.t1 MTR_3g110010 35.714 182 100 8 7 183 220 389 2.67e-13 68.6
MS.gene022915.t1 MTR_5g039470 30.000 220 137 8 5 215 99 310 2.69e-13 67.8
MS.gene022915.t1 MTR_2g005990 28.372 215 133 7 6 211 137 339 1.69e-12 65.9
MS.gene022915.t1 MTR_6g040270 27.830 212 141 7 1 212 122 321 1.84e-12 65.9
MS.gene022915.t1 MTR_7g007340 29.384 211 126 8 7 211 108 301 3.01e-12 65.1
MS.gene022915.t1 MTR_6g022360 28.507 221 132 7 6 215 149 354 7.92e-12 63.9
MS.gene022915.t1 MTR_1g108820 30.270 185 110 6 5 177 121 298 9.45e-12 63.5
MS.gene022915.t1 MTR_1g066830 27.778 216 141 6 6 215 126 332 1.12e-11 63.5
MS.gene022915.t1 MTR_7g021950 29.384 211 136 7 7 211 164 367 1.16e-11 63.5
MS.gene022915.t1 MTR_7g021990 29.384 211 136 7 7 211 164 367 1.17e-11 63.5
MS.gene022915.t1 MTR_7g022105 28.095 210 140 5 7 211 165 368 1.27e-11 63.5
MS.gene022915.t1 MTR_3g113785 47.692 65 27 1 155 212 14 78 1.41e-11 59.3
MS.gene022915.t1 MTR_5g061410 29.240 171 111 5 10 177 104 267 2.03e-11 62.0
MS.gene022915.t1 MTR_5g058000 31.019 216 119 8 5 212 124 317 2.06e-11 62.8
MS.gene022915.t1 MTR_1g085120 31.034 174 105 5 11 177 303 468 2.41e-11 62.8
MS.gene022915.t1 MTR_8g085430 53.333 60 22 2 159 212 213 272 2.64e-11 62.4
MS.gene022915.t1 MTR_1089s0010 27.536 207 129 7 10 212 130 319 3.57e-11 62.0
MS.gene022915.t1 MTR_7g075800 23.140 242 143 8 7 215 141 372 7.88e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 41 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTGCAATTCCTCTAAAA+TGG 0.161153 7.2:-47118331 None:intergenic
CTCAAAACATGCTTGCTTAA+AGG 0.172644 7.2:+47119020 MS.gene022915:CDS
ATATTTATTTGTACATAATA+AGG 0.228390 7.2:+47118356 MS.gene022915:CDS
ACACTTGTCTGGTGTACTTT+TGG 0.230385 7.2:+47118269 MS.gene022915:CDS
AGTTGTGTTGAAAGGCATTC+TGG 0.307205 7.2:-47118999 None:intergenic
TATATCATCCAGCTTCTATC+TGG 0.335498 7.2:+47118303 MS.gene022915:CDS
TCTCACAATGATTACGCTTA+AGG 0.361402 7.2:-47118770 None:intergenic
TCAGCATTTGCGTGCAGAAT+TGG 0.379441 7.2:+47118506 MS.gene022915:CDS
TTATGCTCACTTTGCTCTGC+AGG 0.382170 7.2:+47118475 MS.gene022915:CDS
AGGCATTCTGGAATATTTGC+TGG 0.397575 7.2:-47118987 None:intergenic
AGACCTTTCTCAACTGGTTG+TGG 0.399921 7.2:+47118224 MS.gene022915:CDS
TCAAAATCTTACCATTCATC+AGG 0.400799 7.2:+47118836 MS.gene022915:CDS
AGTGAAAGACCTTTCTCAAC+TGG 0.408908 7.2:+47118218 MS.gene022915:CDS
TGTTGACAGGACTTGGAGAA+TGG 0.438134 7.2:+47118936 MS.gene022915:intron
GCTTGCAATTCCTCTAAAAT+GGG 0.458474 7.2:-47118330 None:intergenic
GATTGCGGAACTTAAGATGT+TGG 0.471118 7.2:-47118728 None:intergenic
AGAGGAAGTTGTGGATAGTT+GGG 0.474055 7.2:+47118959 MS.gene022915:CDS
GAGAGGAAGTTGTGGATAGT+TGG 0.479744 7.2:+47118958 MS.gene022915:CDS
AACCTCAATCTTGAAATGTC+CGG 0.492837 7.2:+47118126 None:intergenic
AGCGTAATCATTGTGAGAAG+TGG 0.507662 7.2:+47118775 MS.gene022915:CDS
CATCAATAAAACCTGATGAA+TGG 0.519118 7.2:-47118847 None:intergenic
TGGGACATCCAGATAGAAGC+TGG 0.524755 7.2:-47118311 None:intergenic
TCGTTGTTCTTCATTTGCAA+CGG 0.536924 7.2:+47118190 MS.gene022915:CDS
AATCCACAACCAGTTGAGAA+AGG 0.541657 7.2:-47118227 None:intergenic
TATTTGTACATAATAAGGAA+TGG 0.542284 7.2:+47118361 MS.gene022915:CDS
ATCATTGTGAGAAGTGGATC+TGG 0.545999 7.2:+47118781 MS.gene022915:CDS
TATGCTCACTTTGCTCTGCA+GGG 0.565940 7.2:+47118476 MS.gene022915:CDS
CTTAAGGATAAGCTCCATGT+TGG 0.567493 7.2:-47118754 None:intergenic
GGAGAATGGAGAGGAAGTTG+TGG 0.577606 7.2:+47118950 MS.gene022915:CDS
TGCGGAACTTAAGATGTTGG+AGG 0.590690 7.2:-47118725 None:intergenic
ATGTTTGCAGTGATCAACTT+CGG 0.596642 7.2:-47118426 None:intergenic
CAATCTTGAAATGTCCGGCA+TGG 0.608926 7.2:+47118131 None:intergenic
ACGAGGTAATGTTACCATGC+CGG 0.615120 7.2:-47118145 None:intergenic
GCTCCATGTTGGTTAGATTG+CGG 0.616847 7.2:-47118743 None:intergenic
GGAAGTTGTGGATAGTTGGG+TGG 0.619960 7.2:+47118962 MS.gene022915:CDS
ACAGGACTTGGAGAATGGAG+AGG 0.667756 7.2:+47118941 MS.gene022915:intron
GTTCCGCAATCTAACCAACA+TGG 0.671128 7.2:+47118740 MS.gene022915:CDS
TTGCAAATGAAGAACAACGA+GGG 0.693329 7.2:-47118187 None:intergenic
AAGATGTTGGAGGTAACATG+TGG 0.703188 7.2:-47118715 None:intergenic
CTACAATTGAAAATGCTACG+AGG 0.748964 7.2:-47118162 None:intergenic
GTTGCAAATGAAGAACAACG+AGG 0.797581 7.2:-47118188 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATTTGTACATAATA+AGG + chr7.2:47118356-47118375 MS.gene022915:CDS 10.0%
!!! GTTAATTTTCTTTTTAATAA+AGG + chr7.2:47118542-47118561 MS.gene022915:intron 10.0%
!! TATATATCAAATTGGAAAAT+AGG - chr7.2:47118904-47118923 None:intergenic 15.0%
!! AAAAAAATTGAATTGTTGAC+AGG + chr7.2:47118923-47118942 MS.gene022915:intron 20.0%
!! TAAAAAGAAAAGAAAAAGCT+AGG - chr7.2:47118873-47118892 None:intergenic 20.0%
!! TATTTGTACATAATAAGGAA+TGG + chr7.2:47118361-47118380 MS.gene022915:CDS 20.0%
! CAGAATTGGTAAGAATATTA+TGG + chr7.2:47118520-47118539 MS.gene022915:intron 25.0%
!! TAACTTTTGTAAATCACAAC+AGG + chr7.2:47118692-47118711 MS.gene022915:intron 25.0%
!!! ATGGTAAGATTTTGAAGTTT+AGG - chr7.2:47118831-47118850 None:intergenic 25.0%
ATCCTACCTAGTATCAATAA+GGG - chr7.2:47118652-47118671 None:intergenic 30.0%
CATCAATAAAACCTGATGAA+TGG - chr7.2:47118850-47118869 None:intergenic 30.0%
CTTTAACCCTTATTGATACT+AGG + chr7.2:47118643-47118662 MS.gene022915:intron 30.0%
TCAAAATCTTACCATTCATC+AGG + chr7.2:47118836-47118855 MS.gene022915:CDS 30.0%
! AAATTGGAAAATAGGTGTTG+AGG - chr7.2:47118896-47118915 None:intergenic 30.0%
!!! ATGTTTTGAGTTGTGTTGAA+AGG - chr7.2:47119010-47119029 None:intergenic 30.0%
AACCCTTATTGATACTAGGT+AGG + chr7.2:47118647-47118666 MS.gene022915:intron 35.0%
ATGTTTGCAGTGATCAACTT+CGG - chr7.2:47118429-47118448 None:intergenic 35.0%
ATTGAATTGTTGACAGGACT+TGG + chr7.2:47118929-47118948 MS.gene022915:intron 35.0%
CTACAATTGAAAATGCTACG+AGG - chr7.2:47118165-47118184 None:intergenic 35.0%
CTCAAAAAACTACACTTGTC+TGG + chr7.2:47118258-47118277 MS.gene022915:CDS 35.0%
CTCAAAACATGCTTGCTTAA+AGG + chr7.2:47119020-47119039 MS.gene022915:CDS 35.0%
GATCCTACCTAGTATCAATA+AGG - chr7.2:47118653-47118672 None:intergenic 35.0%
TATATCATCCAGCTTCTATC+TGG + chr7.2:47118303-47118322 MS.gene022915:CDS 35.0%
TCGTTGTTCTTCATTTGCAA+CGG + chr7.2:47118190-47118209 MS.gene022915:CDS 35.0%
TCTCACAATGATTACGCTTA+AGG - chr7.2:47118773-47118792 None:intergenic 35.0%
TTGCAAATGAAGAACAACGA+GGG - chr7.2:47118190-47118209 None:intergenic 35.0%
! AGCTTGCAATTCCTCTAAAA+TGG - chr7.2:47118334-47118353 None:intergenic 35.0%
! CTCGTAGCATTTTCAATTGT+AGG + chr7.2:47118163-47118182 MS.gene022915:CDS 35.0%
!! GCTTGCAATTCCTCTAAAAT+GGG - chr7.2:47118333-47118352 None:intergenic 35.0%
!!! AAGTGTAGTTTTTTGAGGAG+AGG - chr7.2:47118255-47118274 None:intergenic 35.0%
!!! CAGACAAGTGTAGTTTTTTG+AGG - chr7.2:47118260-47118279 None:intergenic 35.0%
AAGATGTTGGAGGTAACATG+TGG - chr7.2:47118718-47118737 None:intergenic 40.0%
AATCCACAACCAGTTGAGAA+AGG - chr7.2:47118230-47118249 None:intergenic 40.0%
AGAGGAAGTTGTGGATAGTT+GGG + chr7.2:47118959-47118978 MS.gene022915:CDS 40.0%
AGCGTAATCATTGTGAGAAG+TGG + chr7.2:47118775-47118794 MS.gene022915:CDS 40.0%
AGTGAAAGACCTTTCTCAAC+TGG + chr7.2:47118218-47118237 MS.gene022915:CDS 40.0%
ATCATTGTGAGAAGTGGATC+TGG + chr7.2:47118781-47118800 MS.gene022915:CDS 40.0%
CTTAAGGATAAGCTCCATGT+TGG - chr7.2:47118757-47118776 None:intergenic 40.0%
GATTGCGGAACTTAAGATGT+TGG - chr7.2:47118731-47118750 None:intergenic 40.0%
GTTGCAAATGAAGAACAACG+AGG - chr7.2:47118191-47118210 None:intergenic 40.0%
TCACACAGATCATACTCGAA+GGG - chr7.2:47118587-47118606 None:intergenic 40.0%
! ACACTTGTCTGGTGTACTTT+TGG + chr7.2:47118269-47118288 MS.gene022915:CDS 40.0%
! ATCTGGATGTCCCATTTTAG+AGG + chr7.2:47118320-47118339 MS.gene022915:CDS 40.0%
!! AGGCATTCTGGAATATTTGC+TGG - chr7.2:47118990-47119009 None:intergenic 40.0%
!! AGTTGTGTTGAAAGGCATTC+TGG - chr7.2:47119002-47119021 None:intergenic 40.0%
ACGAGGTAATGTTACCATGC+CGG - chr7.2:47118148-47118167 None:intergenic 45.0%
AGACCTTTCTCAACTGGTTG+TGG + chr7.2:47118224-47118243 MS.gene022915:CDS 45.0%
GAGAGGAAGTTGTGGATAGT+TGG + chr7.2:47118958-47118977 MS.gene022915:CDS 45.0%
GTCACACAGATCATACTCGA+AGG - chr7.2:47118588-47118607 None:intergenic 45.0%
GTTCCGCAATCTAACCAACA+TGG + chr7.2:47118740-47118759 MS.gene022915:CDS 45.0%
TATGCTCACTTTGCTCTGCA+GGG + chr7.2:47118476-47118495 MS.gene022915:CDS 45.0%
TCAGCATTTGCGTGCAGAAT+TGG + chr7.2:47118506-47118525 MS.gene022915:CDS 45.0%
TGCGGAACTTAAGATGTTGG+AGG - chr7.2:47118728-47118747 None:intergenic 45.0%
TGTTGACAGGACTTGGAGAA+TGG + chr7.2:47118936-47118955 MS.gene022915:intron 45.0%
TTATGCTCACTTTGCTCTGC+AGG + chr7.2:47118475-47118494 MS.gene022915:CDS 45.0%
! GCTCCATGTTGGTTAGATTG+CGG - chr7.2:47118746-47118765 None:intergenic 45.0%
!!! AATTTTTTTATATATCAAAT+TGG - chr7.2:47118912-47118931 None:intergenic 5.0%
ACAGGACTTGGAGAATGGAG+AGG + chr7.2:47118941-47118960 MS.gene022915:intron 50.0%
GGAAGTTGTGGATAGTTGGG+TGG + chr7.2:47118962-47118981 MS.gene022915:CDS 50.0%
GGAGAATGGAGAGGAAGTTG+TGG + chr7.2:47118950-47118969 MS.gene022915:CDS 50.0%
TGGGACATCCAGATAGAAGC+TGG - chr7.2:47118314-47118333 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 47118141 47119059 47118141 ID=MS.gene022915
chr7.2 mRNA 47118141 47119059 47118141 ID=MS.gene022915.t1;Parent=MS.gene022915
chr7.2 exon 47118141 47118527 47118141 ID=MS.gene022915.t1.exon1;Parent=MS.gene022915.t1
chr7.2 CDS 47118141 47118527 47118141 ID=cds.MS.gene022915.t1;Parent=MS.gene022915.t1
chr7.2 exon 47118714 47118857 47118714 ID=MS.gene022915.t1.exon2;Parent=MS.gene022915.t1
chr7.2 CDS 47118714 47118857 47118714 ID=cds.MS.gene022915.t1;Parent=MS.gene022915.t1
chr7.2 exon 47118945 47119059 47118945 ID=MS.gene022915.t1.exon3;Parent=MS.gene022915.t1
chr7.2 CDS 47118945 47119059 47118945 ID=cds.MS.gene022915.t1;Parent=MS.gene022915.t1
Gene Sequence

>MS.gene022915

ATGTCCGGCATGGTAACATTACCTCGTAGCATTTTCAATTGTAGGACCCTCGTTGTTCTTCATTTGCAACGGATTACAGTGAAAGACCTTTCTCAACTGGTTGTGGATTTTCCTCTCCTCAAAAAACTACACTTGTCTGGTGTACTTTTGGAACGTGCTGAATATATCATCCAGCTTCTATCTGGATGTCCCATTTTAGAGGAATTGCAAGCTGAATATTTATTTGTACATAATAAGGAATGGCTTGTTTCAATGAATTTTATACGAGAAAAGCTTCGAAGCTTACCGAAGTTGATCACTGCAAACATTACTAAATCGACTCATTCTTTGACGTTTATGCTCACTTTGCTCTGCAGGGCAGAGTCTCAGCATTTGCGTGCAGAATTGGTAAGAATATTATGGTTAATTTTCTTTTTAATAAAGGTTGTTAATTATAGTTTTTGCCCTTCGAGTATGATCTGTGTGACGAATCTGTGTTACGAATTTGAGTTATGATCTTGCACTTTAACCCTTATTGATACTAGGTAGGATCTAGTTTTCGAGCGTATTTCTAACTTTTGTAAATCACAACAGGCCACATGTTACCTCCAACATCTTAAGTTCCGCAATCTAACCAACATGGAGCTTATCCTTAAGCGTAATCATTGTGAGAAGTGGATCTGGTTGCTAGAAGTGCTGAAACGTTGTCCTAAACTTCAAAATCTTACCATTCATCAGGTTTTATTGATGCCTAGCTTTTTCTTTTCTTTTTACCTCAACACCTATTTTCCAATTTGATATATAAAAAAATTGAATTGTTGACAGGACTTGGAGAATGGAGAGGAAGTTGTGGATAGTTGGGTGGATCCAGCAAATATTCCAGAATGCCTTTCAACACAACTCAAAACATGCTTGCTTAAAGGCTATAAATGCACAGAAT
Protein sequence

>MS.gene022915.t1

MSGMVTLPRSIFNCRTLVVLHLQRITVKDLSQLVVDFPLLKKLHLSGVLLERAEYIIQLLSGCPILEELQAEYLFVHNKEWLVSMNFIREKLRSLPKLITANITKSTHSLTFMLTLLCRAESQHLRAELATCYLQHLKFRNLTNMELILKRNHCEKWIWLLEVLKRCPKLQNLTIHQDLENGEEVVDSWVDPANIPECLSTQLKTCLLKGYKCTE