Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72956.t1 | XP_013445781.1 | 78.6 | 415 | 86 | 2 | 1 | 414 | 51 | 463 | 7.40E-179 | 636.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72956.t1 | Q8H1R7 | 27.4 | 424 | 265 | 14 | 2 | 414 | 28 | 419 | 1.3e-22 | 109.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72956.t1 | A0A072TQY2 | 78.6 | 415 | 86 | 2 | 1 | 414 | 51 | 463 | 5.3e-179 | 636.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72956.t1 | MTR_8g468810 | 78.554 | 415 | 86 | 2 | 1 | 414 | 51 | 463 | 0.0 | 650 |
MS.gene72956.t1 | MTR_8g058970 | 62.587 | 433 | 143 | 3 | 1 | 414 | 45 | 477 | 0.0 | 517 |
MS.gene72956.t1 | MTR_8g468810 | 81.115 | 323 | 58 | 2 | 1 | 322 | 51 | 371 | 0.0 | 517 |
MS.gene72956.t1 | MTR_8g468810 | 81.749 | 263 | 46 | 1 | 1 | 263 | 51 | 311 | 1.02e-149 | 427 |
MS.gene72956.t1 | MTR_8g468810 | 81.749 | 263 | 46 | 1 | 1 | 263 | 51 | 311 | 1.62e-149 | 427 |
MS.gene72956.t1 | MTR_8g468810 | 81.749 | 263 | 46 | 1 | 1 | 263 | 51 | 311 | 2.77e-149 | 427 |
MS.gene72956.t1 | MTR_2g083840 | 54.067 | 418 | 181 | 6 | 1 | 414 | 47 | 457 | 1.40e-140 | 409 |
MS.gene72956.t1 | MTR_8g062270 | 47.897 | 428 | 193 | 12 | 1 | 413 | 41 | 453 | 2.69e-114 | 342 |
MS.gene72956.t1 | MTR_4g032730 | 46.136 | 440 | 192 | 9 | 3 | 413 | 43 | 466 | 1.78e-112 | 338 |
MS.gene72956.t1 | MTR_8g468840 | 47.381 | 420 | 201 | 9 | 2 | 412 | 40 | 448 | 2.97e-108 | 326 |
MS.gene72956.t1 | MTR_5g092960 | 49.302 | 430 | 184 | 13 | 3 | 413 | 47 | 461 | 8.56e-108 | 325 |
MS.gene72956.t1 | MTR_8g468760 | 48.478 | 427 | 164 | 13 | 1 | 413 | 34 | 418 | 5.11e-106 | 320 |
MS.gene72956.t1 | MTR_8g467800 | 47.541 | 427 | 191 | 12 | 2 | 414 | 46 | 453 | 8.12e-105 | 318 |
MS.gene72956.t1 | MTR_8g014260 | 43.262 | 423 | 213 | 15 | 4 | 414 | 44 | 451 | 1.89e-95 | 293 |
MS.gene72956.t1 | MTR_8g445780 | 44.414 | 367 | 180 | 9 | 4 | 364 | 41 | 389 | 2.94e-81 | 255 |
MS.gene72956.t1 | MTR_5g092960 | 50.000 | 334 | 144 | 10 | 3 | 322 | 47 | 371 | 7.56e-78 | 246 |
MS.gene72956.t1 | MTR_8g469020 | 38.106 | 433 | 233 | 12 | 2 | 414 | 34 | 451 | 3.50e-77 | 246 |
MS.gene72956.t1 | MTR_8g058965 | 38.785 | 428 | 236 | 10 | 2 | 414 | 40 | 456 | 2.10e-75 | 242 |
MS.gene72956.t1 | MTR_8g070950 | 37.875 | 433 | 211 | 15 | 1 | 414 | 41 | 434 | 4.85e-71 | 230 |
MS.gene72956.t1 | MTR_4g050250 | 40.838 | 382 | 190 | 10 | 1 | 356 | 47 | 418 | 2.17e-69 | 225 |
MS.gene72956.t1 | MTR_8g467800 | 51.111 | 270 | 120 | 6 | 2 | 266 | 46 | 308 | 7.06e-66 | 214 |
MS.gene72956.t1 | MTR_8g062010 | 36.058 | 416 | 244 | 11 | 1 | 414 | 35 | 430 | 8.72e-63 | 208 |
MS.gene72956.t1 | MTR_8g062080 | 36.321 | 424 | 233 | 13 | 1 | 414 | 49 | 445 | 1.69e-62 | 208 |
MS.gene72956.t1 | MTR_4g024710 | 42.193 | 301 | 160 | 8 | 117 | 414 | 58 | 347 | 1.89e-58 | 194 |
MS.gene72956.t1 | MTR_8g014160 | 33.412 | 422 | 209 | 11 | 2 | 414 | 67 | 425 | 5.73e-58 | 196 |
MS.gene72956.t1 | MTR_8g062310 | 35.266 | 414 | 226 | 13 | 4 | 414 | 54 | 428 | 6.85e-58 | 196 |
MS.gene72956.t1 | MTR_8g062300 | 34.744 | 449 | 235 | 16 | 1 | 414 | 52 | 477 | 3.26e-54 | 187 |
MS.gene72956.t1 | MTR_4g024745 | 41.259 | 286 | 154 | 8 | 115 | 397 | 10 | 284 | 3.15e-48 | 166 |
MS.gene72956.t1 | MTR_8g014210 | 43.568 | 241 | 126 | 6 | 174 | 414 | 1 | 231 | 2.19e-46 | 159 |
MS.gene72956.t1 | MTR_8g467790 | 34.146 | 369 | 177 | 13 | 1 | 354 | 174 | 491 | 6.34e-44 | 160 |
MS.gene72956.t1 | MTR_8g077460 | 41.451 | 193 | 107 | 4 | 4 | 191 | 38 | 229 | 9.57e-36 | 135 |
MS.gene72956.t1 | MTR_8g077460 | 33.209 | 268 | 150 | 9 | 155 | 414 | 129 | 375 | 2.89e-29 | 117 |
MS.gene72956.t1 | MTR_5g021550 | 50.000 | 116 | 55 | 3 | 4 | 116 | 47 | 162 | 6.28e-28 | 108 |
MS.gene72956.t1 | MTR_5g080710 | 28.066 | 424 | 264 | 15 | 2 | 413 | 59 | 453 | 9.83e-25 | 105 |
MS.gene72956.t1 | MTR_8g014290 | 43.089 | 123 | 61 | 4 | 4 | 117 | 38 | 160 | 3.34e-23 | 95.5 |
MS.gene72956.t1 | MTR_4g056040 | 29.630 | 405 | 237 | 16 | 13 | 388 | 65 | 450 | 6.82e-23 | 100 |
MS.gene72956.t1 | MTR_2g086020 | 27.885 | 416 | 197 | 13 | 1 | 414 | 1 | 315 | 1.04e-22 | 98.2 |
MS.gene72956.t1 | MTR_4g113810 | 36.471 | 170 | 101 | 5 | 57 | 221 | 1 | 168 | 1.63e-21 | 91.3 |
MS.gene72956.t1 | MTR_5g084070 | 27.532 | 385 | 237 | 14 | 2 | 376 | 39 | 391 | 9.60e-21 | 94.0 |
MS.gene72956.t1 | MTR_4g055990 | 28.610 | 374 | 224 | 14 | 41 | 389 | 106 | 461 | 1.13e-20 | 94.4 |
MS.gene72956.t1 | MTR_4g055990 | 28.610 | 374 | 224 | 14 | 41 | 389 | 106 | 461 | 1.37e-20 | 94.0 |
MS.gene72956.t1 | MTR_4g056070 | 30.484 | 351 | 194 | 16 | 41 | 364 | 109 | 436 | 2.94e-20 | 92.8 |
MS.gene72956.t1 | MTR_8g014220 | 42.975 | 121 | 57 | 5 | 46 | 161 | 47 | 160 | 2.03e-17 | 79.7 |
MS.gene72956.t1 | MTR_4g056030 | 28.493 | 365 | 211 | 15 | 41 | 378 | 69 | 410 | 3.18e-17 | 83.6 |
MS.gene72956.t1 | MTR_4g056020 | 28.371 | 356 | 225 | 14 | 41 | 379 | 69 | 411 | 2.75e-16 | 80.9 |
MS.gene72956.t1 | MTR_4g055580 | 27.671 | 365 | 208 | 14 | 44 | 378 | 199 | 537 | 2.92e-15 | 78.2 |
MS.gene72956.t1 | MTR_1g038710 | 26.705 | 352 | 227 | 11 | 48 | 378 | 85 | 426 | 4.76e-15 | 77.0 |
MS.gene72956.t1 | MTR_4g024720 | 35.075 | 134 | 64 | 6 | 4 | 116 | 45 | 176 | 2.26e-14 | 72.0 |
MS.gene72956.t1 | MTR_1g041245 | 31.361 | 169 | 99 | 4 | 2 | 166 | 37 | 192 | 4.25e-13 | 70.9 |
MS.gene72956.t1 | MTR_1g041245 | 32.609 | 138 | 80 | 4 | 286 | 414 | 253 | 386 | 9.00e-11 | 63.5 |
MS.gene72956.t1 | MTR_8g014230 | 48.000 | 75 | 35 | 2 | 330 | 404 | 25 | 95 | 3.09e-12 | 63.2 |
MS.gene72956.t1 | MTR_7g115270 | 22.353 | 425 | 252 | 14 | 2 | 411 | 38 | 399 | 9.31e-12 | 66.6 |
MS.gene72956.t1 | MTR_3g108560 | 25.178 | 421 | 220 | 17 | 2 | 409 | 46 | 384 | 7.14e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72956.t1 | AT4G26340 | 28.103 | 427 | 258 | 16 | 2 | 414 | 28 | 419 | 7.30e-26 | 108 |
MS.gene72956.t1 | AT1G78750 | 26.682 | 431 | 276 | 15 | 2 | 411 | 44 | 455 | 6.77e-23 | 100 |
MS.gene72956.t1 | AT1G78750 | 26.682 | 431 | 276 | 15 | 2 | 411 | 44 | 455 | 6.77e-23 | 100 |
MS.gene72956.t1 | AT1G66300 | 28.409 | 440 | 242 | 21 | 3 | 411 | 56 | 453 | 7.58e-20 | 91.7 |
MS.gene72956.t1 | AT4G13985 | 26.106 | 452 | 254 | 19 | 1 | 411 | 44 | 456 | 1.77e-19 | 90.5 |
MS.gene72956.t1 | AT5G38590 | 27.179 | 390 | 232 | 14 | 2 | 376 | 28 | 380 | 2.12e-19 | 90.1 |
MS.gene72956.t1 | AT1G51370 | 27.529 | 425 | 240 | 23 | 12 | 411 | 51 | 432 | 8.79e-19 | 88.2 |
MS.gene72956.t1 | AT1G66290 | 27.064 | 436 | 252 | 21 | 2 | 411 | 55 | 450 | 1.12e-18 | 88.2 |
MS.gene72956.t1 | AT5G56420 | 25.000 | 436 | 259 | 18 | 2 | 414 | 32 | 422 | 1.82e-18 | 87.4 |
MS.gene72956.t1 | AT5G56420 | 25.000 | 436 | 259 | 18 | 2 | 414 | 32 | 422 | 1.82e-18 | 87.4 |
MS.gene72956.t1 | AT5G56420 | 25.000 | 436 | 259 | 18 | 2 | 414 | 32 | 422 | 1.82e-18 | 87.4 |
MS.gene72956.t1 | AT5G56370 | 26.267 | 434 | 257 | 18 | 2 | 413 | 28 | 420 | 2.16e-18 | 87.0 |
MS.gene72956.t1 | AT5G56370 | 26.267 | 434 | 257 | 18 | 2 | 413 | 28 | 420 | 2.16e-18 | 87.0 |
MS.gene72956.t1 | AT5G22730 | 27.815 | 453 | 241 | 22 | 2 | 411 | 54 | 463 | 4.70e-18 | 86.3 |
MS.gene72956.t1 | AT5G22730 | 27.815 | 453 | 241 | 22 | 2 | 411 | 54 | 463 | 4.70e-18 | 86.3 |
MS.gene72956.t1 | AT3G50710 | 25.635 | 433 | 267 | 17 | 3 | 414 | 29 | 427 | 1.04e-17 | 85.1 |
MS.gene72956.t1 | AT5G38570 | 26.128 | 421 | 227 | 16 | 3 | 413 | 29 | 375 | 1.50e-17 | 84.3 |
MS.gene72956.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 1.77e-17 | 84.3 |
MS.gene72956.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 1.77e-17 | 84.3 |
MS.gene72956.t1 | AT4G10400 | 25.882 | 425 | 258 | 20 | 2 | 413 | 28 | 408 | 1.77e-17 | 84.3 |
MS.gene72956.t1 | AT1G32375 | 25.926 | 432 | 262 | 17 | 3 | 414 | 29 | 422 | 3.49e-17 | 83.6 |
MS.gene72956.t1 | AT1G32375 | 25.926 | 432 | 262 | 17 | 3 | 414 | 29 | 422 | 3.49e-17 | 83.6 |
MS.gene72956.t1 | AT3G54910 | 26.582 | 395 | 246 | 13 | 31 | 414 | 12 | 373 | 5.63e-17 | 82.4 |
MS.gene72956.t1 | AT3G54910 | 26.582 | 395 | 246 | 13 | 31 | 414 | 12 | 373 | 5.63e-17 | 82.4 |
MS.gene72956.t1 | AT3G54910 | 26.582 | 395 | 246 | 13 | 31 | 414 | 12 | 373 | 5.63e-17 | 82.4 |
MS.gene72956.t1 | AT5G60610 | 25.935 | 401 | 234 | 15 | 2 | 380 | 28 | 387 | 4.20e-16 | 80.1 |
MS.gene72956.t1 | AT5G60610 | 25.935 | 401 | 234 | 15 | 2 | 380 | 28 | 387 | 4.20e-16 | 80.1 |
MS.gene72956.t1 | AT1G06630 | 29.137 | 278 | 170 | 10 | 2 | 266 | 38 | 301 | 7.32e-16 | 78.2 |
MS.gene72956.t1 | AT5G38590 | 29.707 | 239 | 147 | 9 | 2 | 233 | 28 | 252 | 8.84e-16 | 77.8 |
MS.gene72956.t1 | AT1G06630 | 27.928 | 333 | 207 | 12 | 2 | 319 | 38 | 352 | 9.70e-16 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.928 | 333 | 207 | 12 | 2 | 319 | 38 | 352 | 9.70e-16 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 47 | 362 | 1.18e-15 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 38 | 353 | 1.24e-15 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 38 | 353 | 1.24e-15 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 38 | 353 | 1.24e-15 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 38 | 353 | 1.24e-15 | 78.6 |
MS.gene72956.t1 | AT1G06630 | 27.844 | 334 | 208 | 12 | 2 | 320 | 38 | 353 | 1.57e-15 | 78.6 |
MS.gene72956.t1 | AT5G22720 | 27.174 | 460 | 243 | 22 | 2 | 413 | 49 | 464 | 1.63e-15 | 78.6 |
MS.gene72956.t1 | AT5G22670 | 30.189 | 371 | 214 | 19 | 30 | 376 | 58 | 407 | 2.44e-15 | 77.8 |
MS.gene72956.t1 | AT1G55660 | 24.130 | 431 | 286 | 17 | 2 | 411 | 79 | 489 | 5.28e-15 | 77.0 |
MS.gene72956.t1 | AT3G58920 | 23.729 | 472 | 270 | 18 | 2 | 414 | 28 | 468 | 9.27e-15 | 76.3 |
MS.gene72956.t1 | AT4G10420 | 25.723 | 346 | 222 | 13 | 77 | 413 | 2 | 321 | 1.61e-14 | 74.3 |
MS.gene72956.t1 | AT5G56700 | 27.005 | 374 | 232 | 16 | 14 | 375 | 2 | 346 | 2.66e-14 | 74.3 |
MS.gene72956.t1 | AT5G56810 | 27.146 | 431 | 253 | 18 | 2 | 411 | 41 | 431 | 5.72e-14 | 73.6 |
MS.gene72956.t1 | AT3G52680 | 25.172 | 437 | 267 | 18 | 2 | 414 | 47 | 447 | 6.17e-14 | 73.6 |
MS.gene72956.t1 | AT5G44950 | 27.696 | 408 | 235 | 20 | 2 | 380 | 30 | 406 | 8.75e-14 | 73.2 |
MS.gene72956.t1 | AT2G26030 | 26.829 | 451 | 252 | 23 | 2 | 411 | 30 | 443 | 1.65e-13 | 72.4 |
MS.gene72956.t1 | AT2G26860 | 25.783 | 415 | 240 | 18 | 2 | 385 | 28 | 405 | 1.96e-13 | 72.0 |
MS.gene72956.t1 | AT2G26860 | 25.783 | 415 | 240 | 18 | 2 | 385 | 28 | 405 | 1.96e-13 | 72.0 |
MS.gene72956.t1 | AT5G38590 | 30.808 | 198 | 125 | 6 | 41 | 233 | 27 | 217 | 2.36e-13 | 70.1 |
MS.gene72956.t1 | AT4G00315 | 24.884 | 430 | 284 | 17 | 2 | 411 | 28 | 438 | 5.79e-13 | 70.5 |
MS.gene72956.t1 | AT1G55660 | 27.982 | 218 | 141 | 7 | 2 | 212 | 79 | 287 | 6.43e-13 | 70.1 |
MS.gene72956.t1 | AT5G56390 | 24.476 | 429 | 272 | 14 | 3 | 413 | 30 | 424 | 1.40e-12 | 69.3 |
MS.gene72956.t1 | AT1G22000 | 25.197 | 381 | 222 | 15 | 2 | 356 | 55 | 398 | 2.12e-12 | 68.9 |
MS.gene72956.t1 | AT1G13780 | 26.619 | 417 | 239 | 20 | 2 | 380 | 36 | 423 | 3.19e-12 | 68.6 |
MS.gene72956.t1 | AT3G49480 | 26.115 | 314 | 194 | 12 | 80 | 375 | 114 | 407 | 3.85e-12 | 68.2 |
MS.gene72956.t1 | AT3G26920 | 27.954 | 347 | 216 | 15 | 78 | 413 | 16 | 339 | 6.28e-12 | 67.0 |
MS.gene72956.t1 | AT3G26920 | 27.954 | 347 | 216 | 15 | 78 | 413 | 16 | 339 | 6.28e-12 | 67.0 |
MS.gene72956.t1 | AT3G54160 | 25.359 | 418 | 254 | 17 | 24 | 412 | 36 | 424 | 7.77e-12 | 67.0 |
MS.gene72956.t1 | AT5G50270 | 24.877 | 406 | 255 | 17 | 3 | 389 | 30 | 404 | 1.05e-11 | 66.6 |
MS.gene72956.t1 | AT3G49480 | 26.829 | 287 | 176 | 11 | 103 | 375 | 1 | 267 | 1.31e-11 | 65.5 |
MS.gene72956.t1 | AT4G14103 | 29.675 | 246 | 145 | 10 | 2 | 234 | 34 | 264 | 2.04e-11 | 65.5 |
MS.gene72956.t1 | AT4G14103 | 29.675 | 246 | 145 | 10 | 2 | 234 | 34 | 264 | 2.04e-11 | 65.5 |
MS.gene72956.t1 | AT4G09920 | 29.091 | 275 | 161 | 16 | 2 | 264 | 28 | 280 | 2.30e-11 | 65.1 |
MS.gene72956.t1 | AT4G09920 | 29.091 | 275 | 161 | 16 | 2 | 264 | 28 | 280 | 2.30e-11 | 65.1 |
MS.gene72956.t1 | AT5G56400 | 24.541 | 436 | 262 | 19 | 4 | 414 | 62 | 455 | 2.35e-11 | 65.9 |
MS.gene72956.t1 | AT3G49030 | 25.058 | 431 | 241 | 17 | 2 | 413 | 47 | 414 | 2.63e-11 | 65.5 |
MS.gene72956.t1 | AT4G14096 | 27.324 | 355 | 218 | 14 | 12 | 344 | 40 | 376 | 2.77e-11 | 65.5 |
MS.gene72956.t1 | AT4G14096 | 27.324 | 355 | 218 | 14 | 12 | 344 | 40 | 376 | 2.77e-11 | 65.5 |
MS.gene72956.t1 | AT4G14103 | 29.675 | 246 | 145 | 10 | 2 | 234 | 34 | 264 | 3.80e-11 | 65.1 |
MS.gene72956.t1 | AT5G27750 | 24.070 | 457 | 273 | 18 | 2 | 414 | 31 | 457 | 3.88e-11 | 65.1 |
MS.gene72956.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 5.75e-11 | 63.5 |
MS.gene72956.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 5.75e-11 | 63.5 |
MS.gene72956.t1 | AT4G09920 | 28.832 | 274 | 167 | 15 | 2 | 262 | 28 | 286 | 5.75e-11 | 63.5 |
MS.gene72956.t1 | AT5G56370 | 26.642 | 274 | 170 | 10 | 2 | 269 | 28 | 276 | 5.93e-11 | 63.9 |
MS.gene72956.t1 | AT4G00160 | 25.694 | 432 | 263 | 17 | 2 | 410 | 42 | 438 | 6.70e-11 | 64.3 |
Find 89 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGACCTATATCCACTTTAA+AGG | 0.185801 | 8.3:+41883509 | MS.gene72956:CDS |
CGGTGAGATCTTTGTAGAAT+TGG | 0.284338 | 8.3:+41882640 | MS.gene72956:CDS |
ACGTACCAAAAGAGATTATT+AGG | 0.292927 | 8.3:+41883176 | MS.gene72956:intron |
CCTCTTCTCGTCTGAGGATC+AGG | 0.298567 | 8.3:+41881797 | MS.gene72956:CDS |
CTTGATGTAGTCTCCTCTTC+TGG | 0.309388 | 8.3:+41882977 | MS.gene72956:CDS |
CACCACATCAATTTGGTCTT+AGG | 0.331226 | 8.3:+41883447 | MS.gene72956:CDS |
AAGTGGGATGCAAGACAATT+AGG | 0.332413 | 8.3:-41883488 | None:intergenic |
CTGAATCTTTGGCCAAGCTT+AGG | 0.379532 | 8.3:+41882795 | MS.gene72956:CDS |
GGCAGAGAGAAGGATATTAA+TGG | 0.390004 | 8.3:-41882735 | None:intergenic |
TACGAAGGACCCGCGACATT+CGG | 0.394870 | 8.3:+41881664 | MS.gene72956:CDS |
AGCAAAGTCTTTGAAATGTT+CGG | 0.401003 | 8.3:-41881616 | None:intergenic |
AGTAAATTCAAAACTCTTCA+AGG | 0.409402 | 8.3:-41882828 | None:intergenic |
GGTGAGATCTTTGTAGAATT+GGG | 0.418728 | 8.3:+41882641 | MS.gene72956:CDS |
ACTCTCCTCCAAGCGCTCTC+TGG | 0.418872 | 8.3:+41883025 | MS.gene72956:CDS |
TTCGGCCTCGCCGTCGACGC+CGG | 0.419368 | 8.3:-41881598 | None:intergenic |
TGAATCTTTGGCCAAGCTTA+GGG | 0.420723 | 8.3:+41882796 | MS.gene72956:CDS |
CGTGGATTCGCACCGCCGTT+GGG | 0.424276 | 8.3:+41881748 | MS.gene72956:CDS |
GATACAGCACCACATCAATT+TGG | 0.425006 | 8.3:+41883440 | MS.gene72956:CDS |
AGCCTCACTGATATCACTAT+TGG | 0.428235 | 8.3:+41882908 | MS.gene72956:CDS |
TCGGCCTCGCCGTCGACGCC+GGG | 0.429312 | 8.3:-41881597 | None:intergenic |
CTCATAGGTATCTTCATCTC+TGG | 0.437215 | 8.3:+41881535 | MS.gene72956:CDS |
GGCCAAAGATTCAGTTGAAA+AGG | 0.438596 | 8.3:-41882786 | None:intergenic |
TGAAGTTATCAAGTTGAGAT+TGG | 0.445049 | 8.3:-41881707 | None:intergenic |
AGAGGAGGTTAGTGCATGAT+AGG | 0.446173 | 8.3:-41881842 | None:intergenic |
ATTATAAGAGCTTCAAGTAT+AGG | 0.447586 | 8.3:-41883317 | None:intergenic |
AGTTTCAAAGTTTCTAAGAC+TGG | 0.448465 | 8.3:-41882761 | None:intergenic |
ATTTAACTCCAGAGAGCGCT+TGG | 0.458373 | 8.3:-41883033 | None:intergenic |
TTGGCGATGCCACTTCTGTT+GGG | 0.460446 | 8.3:+41882927 | MS.gene72956:CDS |
ATCCTCTATATCCTTTAAAG+TGG | 0.461419 | 8.3:-41883520 | None:intergenic |
ATCCACTTTAAAGGATATAG+AGG | 0.462211 | 8.3:+41883518 | MS.gene72956:CDS |
TCAAAACTCTTCAAGGAAGA+TGG | 0.465651 | 8.3:-41882821 | None:intergenic |
GCACTAACCTCCTCTCCATC+AGG | 0.467643 | 8.3:+41881850 | MS.gene72956:CDS |
CAATGAGCCTTGTCTCTCAT+AGG | 0.474674 | 8.3:+41881520 | None:intergenic |
CTTGGAGGAGAGTGAGTAAA+GGG | 0.475202 | 8.3:-41883015 | None:intergenic |
ACGTGGATTCGCACCGCCGT+TGG | 0.482549 | 8.3:+41881747 | MS.gene72956:CDS |
TTCTACAATGAGTACTCTCC+CGG | 0.484115 | 8.3:+41881579 | MS.gene72956:CDS |
ATTGGCGATGCCACTTCTGT+TGG | 0.491458 | 8.3:+41882926 | MS.gene72956:CDS |
TGTAGAATTGGGACAATCAT+CGG | 0.493103 | 8.3:+41882652 | MS.gene72956:CDS |
ATATCCTTTAAAGTGGATAT+AGG | 0.498926 | 8.3:-41883513 | None:intergenic |
CATTGTAGAAATGAAAAGCT+TGG | 0.503238 | 8.3:-41881566 | None:intergenic |
CAAAGTTTCTAAGACTGGAC+AGG | 0.505834 | 8.3:-41882756 | None:intergenic |
TTAAAGGATATAGAGGATGT+TGG | 0.507552 | 8.3:+41883525 | MS.gene72956:CDS |
TAGAGGATGTTGGCTTGAGA+TGG | 0.521759 | 8.3:+41883535 | MS.gene72956:CDS |
AGTTGTAATCTCTTCAATGA+TGG | 0.525654 | 8.3:-41882686 | None:intergenic |
TAGTGATATCAGTGAGGCTA+AGG | 0.528202 | 8.3:-41882904 | None:intergenic |
TACAGAAAAGCGTCGAAAGT+AGG | 0.534200 | 8.3:-41883275 | None:intergenic |
CTCTTCTCGTCTGAGGATCA+GGG | 0.539018 | 8.3:+41881798 | MS.gene72956:CDS |
ATCCTCAAGGTACGGCCCAA+CGG | 0.545220 | 8.3:-41881763 | None:intergenic |
CGCCGTTGGGCCGTACCTTG+AGG | 0.554002 | 8.3:+41881761 | MS.gene72956:CDS |
CCTGATCCTCAGACGAGAAG+AGG | 0.554039 | 8.3:-41881797 | None:intergenic |
ACGCATCTTCCGAATGTCGC+GGG | 0.555891 | 8.3:-41881673 | None:intergenic |
TGTAATGCACACAGTCTCTA+CGG | 0.564381 | 8.3:+41882620 | MS.gene72956:intron |
TCTCGACCTCTTCTCGTCTG+AGG | 0.568024 | 8.3:+41881791 | MS.gene72956:CDS |
AACAGATTCACTTCCAGAAG+AGG | 0.569559 | 8.3:-41882990 | None:intergenic |
TAACTCCAGAGAGCGCTTGG+AGG | 0.571531 | 8.3:-41883030 | None:intergenic |
GCTTGGAGGAGAGTGAGTAA+AGG | 0.575040 | 8.3:-41883016 | None:intergenic |
TAAAGTGGATATAGGTCAAG+TGG | 0.575798 | 8.3:-41883505 | None:intergenic |
GGAAGATGGAACCCTAAGCT+TGG | 0.579963 | 8.3:-41882807 | None:intergenic |
GTGCAAGTTCCCAACAGAAG+TGG | 0.580230 | 8.3:-41882936 | None:intergenic |
AGACTGGACAGGCAGAGAGA+AGG | 0.581233 | 8.3:-41882745 | None:intergenic |
CTGAACGCTCTGTTGACACG+TGG | 0.585988 | 8.3:+41881730 | MS.gene72956:CDS |
GAGTACTCTCCCGGCGTCGA+CGG | 0.586422 | 8.3:+41881588 | MS.gene72956:CDS |
AGATGAAGATCCTCAAGGTA+CGG | 0.599815 | 8.3:-41881771 | None:intergenic |
AAGAGATTACAACTAGACAT+TGG | 0.609472 | 8.3:+41882695 | MS.gene72956:CDS |
CGGAAGATGCGTCTCTCTTG+CGG | 0.610368 | 8.3:+41881684 | MS.gene72956:CDS |
GAACTTAGTCATATTTAACT+CGG | 0.618369 | 8.3:-41883700 | None:intergenic |
GGGCTTCAAACTCCCTCTCG+CGG | 0.620327 | 8.3:+41881818 | MS.gene72956:CDS |
ACAACTAGACATTGGTAATG+TGG | 0.620834 | 8.3:+41882703 | MS.gene72956:CDS |
AGGCTAAGGTACTTGAGACC+AGG | 0.622331 | 8.3:-41882890 | None:intergenic |
CTCTCCCGGCGTCGACGGCG+AGG | 0.630012 | 8.3:+41881593 | MS.gene72956:CDS |
CTCAAGGTACGGCCCAACGG+CGG | 0.630217 | 8.3:-41881760 | None:intergenic |
GACGCATCTTCCGAATGTCG+CGG | 0.638940 | 8.3:-41881674 | None:intergenic |
AAAGTGGATATAGGTCAAGT+GGG | 0.643217 | 8.3:-41883504 | None:intergenic |
ACGGCTTTCTCTCTTTACGA+AGG | 0.645259 | 8.3:+41881649 | MS.gene72956:CDS |
GTTTAGTTGTAATACAACAA+TGG | 0.648312 | 8.3:+41883063 | MS.gene72956:CDS |
TCTTATAATTCAGAATGACA+AGG | 0.648619 | 8.3:+41883331 | MS.gene72956:CDS |
AAAACGGTAACCTGATGGAG+AGG | 0.651756 | 8.3:-41881860 | None:intergenic |
ACGGTAACCTGATGGAGAGG+AGG | 0.652142 | 8.3:-41881857 | None:intergenic |
TGTTGGGAACTTGCACAACG+TGG | 0.655593 | 8.3:+41882943 | MS.gene72956:CDS |
TGCATGATAGGACCGCGAGA+GGG | 0.662917 | 8.3:-41881830 | None:intergenic |
GTCCTAAGACCAAATTGATG+TGG | 0.669559 | 8.3:-41883449 | None:intergenic |
GTGCATGATAGGACCGCGAG+AGG | 0.674731 | 8.3:-41881831 | None:intergenic |
TGTCTTGAGATAGACACACC+TGG | 0.677521 | 8.3:+41882872 | MS.gene72956:CDS |
GAAGATACCTATGAGAGACA+AGG | 0.684686 | 8.3:-41881527 | None:intergenic |
GGTCGAGATGAAGATCCTCA+AGG | 0.701781 | 8.3:-41881776 | None:intergenic |
TGGGAACTTGCACAACGTGG+AGG | 0.706891 | 8.3:+41882946 | MS.gene72956:CDS |
CGCCAATAGTGATATCAGTG+AGG | 0.714173 | 8.3:-41882910 | None:intergenic |
CGGCAGACAGTAGATCCCCG+TGG | 0.745934 | 8.3:-41883680 | None:intergenic |
AAAATTTCGTATATGCCACG+GGG | 0.751789 | 8.3:+41883665 | MS.gene72956:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTTTTTTTTTTTTTGAA+AGG | - | chr8.3:41882032-41882051 | None:intergenic | 10.0% |
!! | TATAAAGGAATATATAATCA+TGG | - | chr8.3:41883108-41883127 | None:intergenic | 15.0% |
!!! | ATGTTTTTTTTAGAAAGTTT+AGG | - | chr8.3:41882219-41882238 | None:intergenic | 15.0% |
!!! | TTGTCATATCTTTTATTAAT+TGG | - | chr8.3:41882358-41882377 | None:intergenic | 15.0% |
!! | AATATGAAGGGAAAAAAAAA+CGG | - | chr8.3:41881879-41881898 | None:intergenic | 20.0% |
!! | ACTAAAATACTCAAATATGA+AGG | - | chr8.3:41881892-41881911 | None:intergenic | 20.0% |
!! | CTAAAATACTCAAATATGAA+GGG | - | chr8.3:41881891-41881910 | None:intergenic | 20.0% |
!! | GAAGACTACTAAATATATAA+AGG | - | chr8.3:41883123-41883142 | None:intergenic | 20.0% |
!!! | ACGAAATTTTTTTGAGAAAA+TGG | - | chr8.3:41883655-41883674 | None:intergenic | 20.0% |
!!! | TTTTTATTCTACTATTGTAC+TGG | + | chr8.3:41882467-41882486 | MS.gene72956:intron | 20.0% |
! | AAAAAATTTCGTATATGCCA+CGG | + | chr8.3:41883663-41883682 | MS.gene72956:CDS | 25.0% |
! | AGTAAATTCAAAACTCTTCA+AGG | - | chr8.3:41882831-41882850 | None:intergenic | 25.0% |
! | ATTATAAGAGCTTCAAGTAT+AGG | - | chr8.3:41883320-41883339 | None:intergenic | 25.0% |
! | GTTTAGTTGTAATACAACAA+TGG | + | chr8.3:41883063-41883082 | MS.gene72956:CDS | 25.0% |
! | TCTTATAATTCAGAATGACA+AGG | + | chr8.3:41883331-41883350 | MS.gene72956:CDS | 25.0% |
! | TGTTATATGAAAATAACTCG+AGG | + | chr8.3:41882251-41882270 | MS.gene72956:intron | 25.0% |
!!! | ATATCCTTTAAAGTGGATAT+AGG | - | chr8.3:41883516-41883535 | None:intergenic | 25.0% |
!!! | GTGTTGTTTGTTTGATTATT+TGG | + | chr8.3:41883393-41883412 | MS.gene72956:intron | 25.0% |
!!! | TTTTTCGAAAATGCACTTTT+CGG | + | chr8.3:41883217-41883236 | MS.gene72956:CDS | 25.0% |
AAAAAAAAACGGTAACCTGA+TGG | - | chr8.3:41881868-41881887 | None:intergenic | 30.0% | |
AAAAATTTCGTATATGCCAC+GGG | + | chr8.3:41883664-41883683 | MS.gene72956:CDS | 30.0% | |
AAAATAACTCGAGGAAAACT+AGG | + | chr8.3:41882260-41882279 | MS.gene72956:intron | 30.0% | |
AAGAGATTACAACTAGACAT+TGG | + | chr8.3:41882695-41882714 | MS.gene72956:CDS | 30.0% | |
ACGTACCAAAAGAGATTATT+AGG | + | chr8.3:41883176-41883195 | MS.gene72956:intron | 30.0% | |
AGTTGTAATCTCTTCAATGA+TGG | - | chr8.3:41882689-41882708 | None:intergenic | 30.0% | |
CATTGTAGAAATGAAAAGCT+TGG | - | chr8.3:41881569-41881588 | None:intergenic | 30.0% | |
TACAGAGAGTTAGGTATAAT+GGG | + | chr8.3:41881936-41881955 | MS.gene72956:intron | 30.0% | |
TTAAAGGATATAGAGGATGT+TGG | + | chr8.3:41883525-41883544 | MS.gene72956:CDS | 30.0% | |
TTAGAAAGTTTAGGTGAGTT+GGG | - | chr8.3:41882210-41882229 | None:intergenic | 30.0% | |
TTGACCTATATCCACTTTAA+AGG | + | chr8.3:41883509-41883528 | MS.gene72956:CDS | 30.0% | |
TTTAGAAAGTTTAGGTGAGT+TGG | - | chr8.3:41882211-41882230 | None:intergenic | 30.0% | |
! | AGACAATTAGGAACACTTTT+CGG | - | chr8.3:41883479-41883498 | None:intergenic | 30.0% |
! | ATCCACTTTAAAGGATATAG+AGG | + | chr8.3:41883518-41883537 | MS.gene72956:CDS | 30.0% |
! | ATCCTCTATATCCTTTAAAG+TGG | - | chr8.3:41883523-41883542 | None:intergenic | 30.0% |
! | GACTACCTAATAATCTCTTT+TGG | - | chr8.3:41883184-41883203 | None:intergenic | 30.0% |
! | GCTAGTTATGTTTTGCATTA+TGG | + | chr8.3:41883563-41883582 | MS.gene72956:CDS | 30.0% |
! | TTCCTTTTCAACTGAATCTT+TGG | + | chr8.3:41882784-41882803 | MS.gene72956:CDS | 30.0% |
! | TTGAAGAAAATGCGTTTTTC+TGG | + | chr8.3:41883593-41883612 | MS.gene72956:CDS | 30.0% |
! | TTTATTTGCTACAGAGAGTT+AGG | + | chr8.3:41881927-41881946 | MS.gene72956:intron | 30.0% |
!! | AGATATGACAAAACTTGCTA+AGG | + | chr8.3:41882367-41882386 | MS.gene72956:intron | 30.0% |
!! | AGCAAAGTCTTTGAAATGTT+CGG | - | chr8.3:41881619-41881638 | None:intergenic | 30.0% |
!! | AGTTTCAAAGTTTCTAAGAC+TGG | - | chr8.3:41882764-41882783 | None:intergenic | 30.0% |
!! | ATTGAGTTTAACTTGAGCTT+TGG | + | chr8.3:41883361-41883380 | MS.gene72956:intron | 30.0% |
!! | TGAAGTTATCAAGTTGAGAT+TGG | - | chr8.3:41881710-41881729 | None:intergenic | 30.0% |
AAAATTTCGTATATGCCACG+GGG | + | chr8.3:41883665-41883684 | MS.gene72956:CDS | 35.0% | |
AAAGTGGATATAGGTCAAGT+GGG | - | chr8.3:41883507-41883526 | None:intergenic | 35.0% | |
AGAGATTCCTGCATCAATAA+TGG | - | chr8.3:41882113-41882132 | None:intergenic | 35.0% | |
ATCACCAATTACTACTCCAT+CGG | - | chr8.3:41882288-41882307 | None:intergenic | 35.0% | |
CTACAGAGAGTTAGGTATAA+TGG | + | chr8.3:41881935-41881954 | MS.gene72956:intron | 35.0% | |
GAGATTCCTGCATCAATAAT+GGG | - | chr8.3:41882112-41882131 | None:intergenic | 35.0% | |
GATCTGTAAGTACGTTTGTT+GGG | + | chr8.3:41882142-41882161 | MS.gene72956:intron | 35.0% | |
GGTGAGATCTTTGTAGAATT+GGG | + | chr8.3:41882641-41882660 | MS.gene72956:CDS | 35.0% | |
TAAAGTGGATATAGGTCAAG+TGG | - | chr8.3:41883508-41883527 | None:intergenic | 35.0% | |
TATTGATGCAGGAATCTCTT+TGG | + | chr8.3:41882114-41882133 | MS.gene72956:intron | 35.0% | |
TCAAAACTCTTCAAGGAAGA+TGG | - | chr8.3:41882824-41882843 | None:intergenic | 35.0% | |
TGATCTGTAAGTACGTTTGT+TGG | + | chr8.3:41882141-41882160 | MS.gene72956:intron | 35.0% | |
TGTAGAATTGGGACAATCAT+CGG | + | chr8.3:41882652-41882671 | MS.gene72956:CDS | 35.0% | |
TTAGACATTCACTTGCAGAA+TGG | + | chr8.3:41882443-41882462 | MS.gene72956:intron | 35.0% | |
!! | ACAACTAGACATTGGTAATG+TGG | + | chr8.3:41882703-41882722 | MS.gene72956:CDS | 35.0% |
!! | TTTAACTTGAGCTTTGGTGT+GGG | + | chr8.3:41883367-41883386 | MS.gene72956:intron | 35.0% |
!!! | GACTTTGCTATTTTCGTCAA+CGG | + | chr8.3:41881630-41881649 | MS.gene72956:CDS | 35.0% |
!!! | GCGTTTTTCTGGTTTTTTGT+TGG | + | chr8.3:41883604-41883623 | MS.gene72956:CDS | 35.0% |
AACAGATTCACTTCCAGAAG+AGG | - | chr8.3:41882993-41883012 | None:intergenic | 40.0% | |
AAGTGGGATGCAAGACAATT+AGG | - | chr8.3:41883491-41883510 | None:intergenic | 40.0% | |
ACAATGAAAGTTGACTGCGT+TGG | + | chr8.3:41882050-41882069 | MS.gene72956:intron | 40.0% | |
AGATGAAGATCCTCAAGGTA+CGG | - | chr8.3:41881774-41881793 | None:intergenic | 40.0% | |
AGCCTCACTGATATCACTAT+TGG | + | chr8.3:41882908-41882927 | MS.gene72956:CDS | 40.0% | |
CGGTGAGATCTTTGTAGAAT+TGG | + | chr8.3:41882640-41882659 | MS.gene72956:CDS | 40.0% | |
CTCATAGGTATCTTCATCTC+TGG | + | chr8.3:41881535-41881554 | MS.gene72956:CDS | 40.0% | |
GAAGATACCTATGAGAGACA+AGG | - | chr8.3:41881530-41881549 | None:intergenic | 40.0% | |
GATACAGCACCACATCAATT+TGG | + | chr8.3:41883440-41883459 | MS.gene72956:CDS | 40.0% | |
GGCAGAGAGAAGGATATTAA+TGG | - | chr8.3:41882738-41882757 | None:intergenic | 40.0% | |
GGCCAAAGATTCAGTTGAAA+AGG | - | chr8.3:41882789-41882808 | None:intergenic | 40.0% | |
GGTACGTACAAAACAACAAG+TGG | - | chr8.3:41883163-41883182 | None:intergenic | 40.0% | |
GTCCTAAGACCAAATTGATG+TGG | - | chr8.3:41883452-41883471 | None:intergenic | 40.0% | |
TAGTGATATCAGTGAGGCTA+AGG | - | chr8.3:41882907-41882926 | None:intergenic | 40.0% | |
TCAACTCCCATTATTGATGC+AGG | + | chr8.3:41882103-41882122 | MS.gene72956:intron | 40.0% | |
TGAATCTTTGGCCAAGCTTA+GGG | + | chr8.3:41882796-41882815 | MS.gene72956:CDS | 40.0% | |
TGTAATGCACACAGTCTCTA+CGG | + | chr8.3:41882620-41882639 | MS.gene72956:intron | 40.0% | |
TTCTACAATGAGTACTCTCC+CGG | + | chr8.3:41881579-41881598 | MS.gene72956:CDS | 40.0% | |
! | CACCACATCAATTTGGTCTT+AGG | + | chr8.3:41883447-41883466 | MS.gene72956:CDS | 40.0% |
!! | CAAAGTTTCTAAGACTGGAC+AGG | - | chr8.3:41882759-41882778 | None:intergenic | 40.0% |
!! | GTTTAACTTGAGCTTTGGTG+TGG | + | chr8.3:41883366-41883385 | MS.gene72956:intron | 40.0% |
!! | TACAGAAAAGCGTCGAAAGT+AGG | - | chr8.3:41883278-41883297 | None:intergenic | 40.0% |
AAAACGGTAACCTGATGGAG+AGG | - | chr8.3:41881863-41881882 | None:intergenic | 45.0% | |
ACGGCTTTCTCTCTTTACGA+AGG | + | chr8.3:41881649-41881668 | MS.gene72956:CDS | 45.0% | |
AGAGGAGGTTAGTGCATGAT+AGG | - | chr8.3:41881845-41881864 | None:intergenic | 45.0% | |
CGCCAATAGTGATATCAGTG+AGG | - | chr8.3:41882913-41882932 | None:intergenic | 45.0% | |
CTGAATCTTTGGCCAAGCTT+AGG | + | chr8.3:41882795-41882814 | MS.gene72956:CDS | 45.0% | |
CTTGATGTAGTCTCCTCTTC+TGG | + | chr8.3:41882977-41882996 | MS.gene72956:CDS | 45.0% | |
CTTGGAGGAGAGTGAGTAAA+GGG | - | chr8.3:41883018-41883037 | None:intergenic | 45.0% | |
GGATCCGATGGAGTAGTAAT+TGG | + | chr8.3:41882281-41882300 | MS.gene72956:intron | 45.0% | |
GTAGAGTTTACTCACCAGCA+AGG | + | chr8.3:41882072-41882091 | MS.gene72956:intron | 45.0% | |
TGTCTTGAGATAGACACACC+TGG | + | chr8.3:41882872-41882891 | MS.gene72956:CDS | 45.0% | |
! | AGTTGTACCTTGTTTCCTGC+AGG | + | chr8.3:41883418-41883437 | MS.gene72956:intron | 45.0% |
!! | ATTTAACTCCAGAGAGCGCT+TGG | - | chr8.3:41883036-41883055 | None:intergenic | 45.0% |
!! | TAGAGGATGTTGGCTTGAGA+TGG | + | chr8.3:41883535-41883554 | MS.gene72956:CDS | 45.0% |
AGTTGATCTCACCACCTTGC+TGG | - | chr8.3:41882089-41882108 | None:intergenic | 50.0% | |
CGAGGAAAACTAGGATCCGA+TGG | + | chr8.3:41882269-41882288 | MS.gene72956:intron | 50.0% | |
CTCTTCTCGTCTGAGGATCA+GGG | + | chr8.3:41881798-41881817 | MS.gene72956:CDS | 50.0% | |
GAGTTTACTCACCAGCAAGG+TGG | + | chr8.3:41882075-41882094 | MS.gene72956:intron | 50.0% | |
GCTGTATCCTGCAGGAAACA+AGG | - | chr8.3:41883428-41883447 | None:intergenic | 50.0% | |
GCTTGGAGGAGAGTGAGTAA+AGG | - | chr8.3:41883019-41883038 | None:intergenic | 50.0% | |
GGAAGATGGAACCCTAAGCT+TGG | - | chr8.3:41882810-41882829 | None:intergenic | 50.0% | |
GGTCGAGATGAAGATCCTCA+AGG | - | chr8.3:41881779-41881798 | None:intergenic | 50.0% | |
GTGCAAGTTCCCAACAGAAG+TGG | - | chr8.3:41882939-41882958 | None:intergenic | 50.0% | |
TGTTGGGAACTTGCACAACG+TGG | + | chr8.3:41882943-41882962 | MS.gene72956:CDS | 50.0% | |
! | AGGCTAAGGTACTTGAGACC+AGG | - | chr8.3:41882893-41882912 | None:intergenic | 50.0% |
! | ATTGGCGATGCCACTTCTGT+TGG | + | chr8.3:41882926-41882945 | MS.gene72956:CDS | 50.0% |
! | TTGGCGATGCCACTTCTGTT+GGG | + | chr8.3:41882927-41882946 | MS.gene72956:CDS | 50.0% |
ACGCATCTTCCGAATGTCGC+GGG | - | chr8.3:41881676-41881695 | None:intergenic | 55.0% | |
ACGGTAACCTGATGGAGAGG+AGG | - | chr8.3:41881860-41881879 | None:intergenic | 55.0% | |
AGACTGGACAGGCAGAGAGA+AGG | - | chr8.3:41882748-41882767 | None:intergenic | 55.0% | |
ATCCTCAAGGTACGGCCCAA+CGG | - | chr8.3:41881766-41881785 | None:intergenic | 55.0% | |
CCTCTTCTCGTCTGAGGATC+AGG | + | chr8.3:41881797-41881816 | MS.gene72956:CDS | 55.0% | |
CCTGATCCTCAGACGAGAAG+AGG | - | chr8.3:41881800-41881819 | None:intergenic | 55.0% | |
CGGAAGATGCGTCTCTCTTG+CGG | + | chr8.3:41881684-41881703 | MS.gene72956:CDS | 55.0% | |
CTGAACGCTCTGTTGACACG+TGG | + | chr8.3:41881730-41881749 | MS.gene72956:CDS | 55.0% | |
GACGCATCTTCCGAATGTCG+CGG | - | chr8.3:41881677-41881696 | None:intergenic | 55.0% | |
GCACTAACCTCCTCTCCATC+AGG | + | chr8.3:41881850-41881869 | MS.gene72956:CDS | 55.0% | |
TACGAAGGACCCGCGACATT+CGG | + | chr8.3:41881664-41881683 | MS.gene72956:CDS | 55.0% | |
TCTCGACCTCTTCTCGTCTG+AGG | + | chr8.3:41881791-41881810 | MS.gene72956:CDS | 55.0% | |
TGCATGATAGGACCGCGAGA+GGG | - | chr8.3:41881833-41881852 | None:intergenic | 55.0% | |
TGGGAACTTGCACAACGTGG+AGG | + | chr8.3:41882946-41882965 | MS.gene72956:CDS | 55.0% | |
!! | GATGTGGTGCTGTATCCTGC+AGG | - | chr8.3:41883436-41883455 | None:intergenic | 55.0% |
!! | TAACTCCAGAGAGCGCTTGG+AGG | - | chr8.3:41883033-41883052 | None:intergenic | 55.0% |
ACTCTCCTCCAAGCGCTCTC+TGG | + | chr8.3:41883025-41883044 | MS.gene72956:CDS | 60.0% | |
AGAGACCTGCCTTGTCGCTC+GGG | + | chr8.3:41882173-41882192 | MS.gene72956:intron | 60.0% | |
GAGAGACCTGCCTTGTCGCT+CGG | + | chr8.3:41882172-41882191 | MS.gene72956:intron | 60.0% | |
GGGCTTCAAACTCCCTCTCG+CGG | + | chr8.3:41881818-41881837 | MS.gene72956:CDS | 60.0% | |
GTGCATGATAGGACCGCGAG+AGG | - | chr8.3:41881834-41881853 | None:intergenic | 60.0% | |
AAGCTCCCGAGCGACAAGGC+AGG | - | chr8.3:41882181-41882200 | None:intergenic | 65.0% | |
ACGTGGATTCGCACCGCCGT+TGG | + | chr8.3:41881747-41881766 | MS.gene72956:CDS | 65.0% | |
CCAGAAGCTCCCGAGCGACA+AGG | - | chr8.3:41882185-41882204 | None:intergenic | 65.0% | |
CCTTGTCGCTCGGGAGCTTC+TGG | + | chr8.3:41882182-41882201 | MS.gene72956:intron | 65.0% | |
CGGCAGACAGTAGATCCCCG+TGG | - | chr8.3:41883683-41883702 | None:intergenic | 65.0% | |
CGTGGATTCGCACCGCCGTT+GGG | + | chr8.3:41881748-41881767 | MS.gene72956:CDS | 65.0% | |
CTCAAGGTACGGCCCAACGG+CGG | - | chr8.3:41881763-41881782 | None:intergenic | 65.0% | |
! | GAGTACTCTCCCGGCGTCGA+CGG | + | chr8.3:41881588-41881607 | MS.gene72956:CDS | 65.0% |
CGCCGTTGGGCCGTACCTTG+AGG | + | chr8.3:41881761-41881780 | MS.gene72956:CDS | 70.0% | |
TTCGGCCTCGCCGTCGACGC+CGG | - | chr8.3:41881601-41881620 | None:intergenic | 75.0% | |
! | TCGGCCTCGCCGTCGACGCC+GGG | - | chr8.3:41881600-41881619 | None:intergenic | 80.0% |
!!! | CTCTCCCGGCGTCGACGGCG+AGG | + | chr8.3:41881593-41881612 | MS.gene72956:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 41881522 | 41883718 | 41881522 | ID=MS.gene72956 |
chr8.3 | mRNA | 41881522 | 41883718 | 41881522 | ID=MS.gene72956.t1;Parent=MS.gene72956 |
chr8.3 | exon | 41881522 | 41881871 | 41881522 | ID=MS.gene72956.t1.exon1;Parent=MS.gene72956.t1 |
chr8.3 | CDS | 41881522 | 41881871 | 41881522 | ID=cds.MS.gene72956.t1;Parent=MS.gene72956.t1 |
chr8.3 | exon | 41882634 | 41883084 | 41882634 | ID=MS.gene72956.t1.exon2;Parent=MS.gene72956.t1 |
chr8.3 | CDS | 41882634 | 41883084 | 41882634 | ID=cds.MS.gene72956.t1;Parent=MS.gene72956.t1 |
chr8.3 | exon | 41883188 | 41883352 | 41883188 | ID=MS.gene72956.t1.exon3;Parent=MS.gene72956.t1 |
chr8.3 | CDS | 41883188 | 41883352 | 41883188 | ID=cds.MS.gene72956.t1;Parent=MS.gene72956.t1 |
chr8.3 | exon | 41883440 | 41883718 | 41883440 | ID=MS.gene72956.t1.exon4;Parent=MS.gene72956.t1 |
chr8.3 | CDS | 41883440 | 41883718 | 41883440 | ID=cds.MS.gene72956.t1;Parent=MS.gene72956.t1 |
Gene Sequence |
Protein sequence |