AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63214


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63214.t1 MTR_8g468840 84.701 451 67 2 2 451 1 450 0.0 746
MS.gene63214.t1 MTR_5g092960 64.653 447 145 6 15 451 19 462 0.0 519
MS.gene63214.t1 MTR_8g062270 61.991 442 158 5 15 450 16 453 0.0 515
MS.gene63214.t1 MTR_8g467800 58.559 444 167 6 14 450 19 452 7.77e-161 462
MS.gene63214.t1 MTR_4g032730 53.700 473 191 7 1 451 1 467 3.30e-156 451
MS.gene63214.t1 MTR_8g468760 57.205 458 147 11 2 450 1 418 1.04e-155 447
MS.gene63214.t1 MTR_8g468810 52.444 450 190 10 14 450 24 462 2.63e-142 415
MS.gene63214.t1 MTR_2g083840 51.910 445 196 9 15 450 21 456 1.55e-135 398
MS.gene63214.t1 MTR_5g092960 63.764 356 117 5 15 360 19 372 3.75e-132 387
MS.gene63214.t1 MTR_8g058970 47.423 485 206 14 5 450 2 476 2.35e-123 367
MS.gene63214.t1 MTR_8g468810 53.521 355 151 7 14 360 24 372 1.78e-110 331
MS.gene63214.t1 MTR_8g014260 41.649 461 246 11 2 450 1 450 4.78e-99 304
MS.gene63214.t1 MTR_8g445780 45.477 409 198 11 2 405 1 389 5.88e-96 294
MS.gene63214.t1 MTR_8g467800 57.053 319 119 5 14 328 19 323 8.19e-95 290
MS.gene63214.t1 MTR_8g468810 55.709 289 122 5 14 301 24 307 1.72e-94 288
MS.gene63214.t1 MTR_8g468810 55.709 289 122 5 14 301 24 307 2.54e-94 288
MS.gene63214.t1 MTR_8g468810 55.709 289 122 5 14 301 24 307 4.16e-94 288
MS.gene63214.t1 MTR_8g469020 39.514 453 248 9 15 450 7 450 2.91e-88 276
MS.gene63214.t1 MTR_8g058965 41.850 454 235 12 15 450 13 455 6.01e-86 271
MS.gene63214.t1 MTR_8g062080 38.717 452 231 12 15 450 23 444 6.24e-75 242
MS.gene63214.t1 MTR_8g062010 38.170 448 248 13 10 450 4 429 1.36e-73 238
MS.gene63214.t1 MTR_4g050250 40.047 422 223 11 2 397 1 418 3.31e-73 236
MS.gene63214.t1 MTR_8g062310 37.955 440 232 12 15 450 25 427 8.99e-73 236
MS.gene63214.t1 MTR_8g070950 37.445 454 250 12 7 450 4 433 2.21e-72 235
MS.gene63214.t1 MTR_8g077460 34.868 456 208 17 2 450 1 374 4.18e-66 216
MS.gene63214.t1 MTR_8g062300 35.639 477 240 16 15 450 26 476 1.21e-64 216
MS.gene63214.t1 MTR_8g014210 49.138 232 109 5 221 450 6 230 5.00e-58 191
MS.gene63214.t1 MTR_4g024710 41.275 298 161 9 158 450 58 346 1.80e-56 191
MS.gene63214.t1 MTR_8g014160 41.914 303 165 7 14 309 40 338 3.17e-53 184
MS.gene63214.t1 MTR_8g467790 34.606 393 196 15 15 395 148 491 1.01e-49 177
MS.gene63214.t1 MTR_4g024745 43.321 277 144 8 149 420 1 269 1.24e-48 168
MS.gene63214.t1 MTR_5g084070 31.279 438 261 16 15 443 13 419 6.13e-34 132
MS.gene63214.t1 MTR_8g014290 43.421 152 79 4 14 158 9 160 5.71e-33 122
MS.gene63214.t1 MTR_5g021550 46.259 147 74 4 14 157 18 162 5.99e-33 122
MS.gene63214.t1 MTR_5g080710 30.717 446 266 17 12 443 30 446 3.69e-28 116
MS.gene63214.t1 MTR_2g008320 26.398 447 242 16 15 448 52 424 1.88e-26 111
MS.gene63214.t1 MTR_3g108150 27.790 457 228 18 14 450 12 386 1.63e-25 107
MS.gene63214.t1 MTR_3g036250 26.411 443 233 13 15 448 5 363 9.77e-25 105
MS.gene63214.t1 MTR_4g024720 38.764 178 85 5 2 157 1 176 1.11e-24 101
MS.gene63214.t1 MTR_4g056030 27.739 429 261 17 15 420 9 411 4.08e-24 104
MS.gene63214.t1 MTR_4g056020 28.777 417 256 18 15 412 9 403 5.51e-24 104
MS.gene63214.t1 MTR_2g086020 42.361 144 77 2 309 450 175 314 1.27e-23 101
MS.gene63214.t1 MTR_2g086020 39.333 150 70 6 41 183 2 137 3.30e-17 82.8
MS.gene63214.t1 MTR_3g071850 28.251 446 249 20 8 443 17 401 1.30e-23 104
MS.gene63214.t1 MTR_3g108560 25.893 448 243 15 14 450 19 388 2.18e-23 101
MS.gene63214.t1 MTR_6g022500 26.457 446 243 15 15 448 101 473 2.80e-23 102
MS.gene63214.t1 MTR_5g008950 25.670 448 235 14 17 450 1 364 5.74e-23 100
MS.gene63214.t1 MTR_4g056070 27.069 447 253 18 15 406 9 437 2.46e-22 99.4
MS.gene63214.t1 MTR_0543s0010 26.477 457 244 16 5 450 74 449 3.69e-22 99.0
MS.gene63214.t1 MTR_6g045333 26.154 455 261 17 8 450 54 445 5.36e-22 98.2
MS.gene63214.t1 MTR_3g107100 25.000 452 256 14 14 448 10 395 7.42e-22 97.4
MS.gene63214.t1 MTR_1089s0010 26.058 449 243 17 15 451 8 379 8.29e-21 94.0
MS.gene63214.t1 MTR_0492s0020 26.620 432 227 15 5 427 74 424 1.18e-20 94.4
MS.gene63214.t1 MTR_5g073420 24.107 448 251 17 15 451 11 380 1.26e-20 93.6
MS.gene63214.t1 MTR_4g056040 27.051 451 266 17 15 420 9 441 1.81e-20 94.4
MS.gene63214.t1 MTR_4g098590 27.711 415 228 13 17 420 1 354 4.48e-20 92.0
MS.gene63214.t1 MTR_1g108820 27.692 455 235 23 13 449 6 384 5.13e-20 92.0
MS.gene63214.t1 MTR_4g113810 37.647 170 98 5 99 263 2 168 7.00e-20 87.0
MS.gene63214.t1 MTR_1g038710 27.103 428 271 16 15 420 19 427 1.12e-19 91.7
MS.gene63214.t1 MTR_2g036470 24.017 458 276 14 2 450 1 395 1.68e-19 90.5
MS.gene63214.t1 MTR_4g055990 25.439 456 279 14 15 420 9 453 2.48e-19 90.9
MS.gene63214.t1 MTR_4g055990 25.439 456 279 14 15 420 9 453 2.59e-19 90.9
MS.gene63214.t1 MTR_7g055943 24.667 450 258 17 15 451 40 421 2.79e-19 90.1
MS.gene63214.t1 MTR_3g087260 26.052 499 269 17 8 450 2 456 3.87e-19 89.7
MS.gene63214.t1 MTR_5g039950 25.561 446 261 12 14 442 22 413 4.69e-19 89.4
MS.gene63214.t1 MTR_4g080787 26.267 434 273 17 14 420 18 431 7.59e-19 89.4
MS.gene63214.t1 MTR_5g058100 24.889 450 249 16 15 450 9 383 1.03e-18 88.2
MS.gene63214.t1 MTR_7g032380 32.995 197 114 6 15 208 11 192 1.11e-18 87.4
MS.gene63214.t1 MTR_6g011460 24.503 453 249 13 15 451 46 421 1.34e-18 88.2
MS.gene63214.t1 MTR_4g039440 24.945 453 248 15 15 450 34 411 1.49e-18 87.8
MS.gene63214.t1 MTR_2g007450 32.547 212 119 7 15 210 16 219 4.11e-18 86.7
MS.gene63214.t1 MTR_2g007450 31.852 135 84 4 315 448 290 417 2.70e-11 65.5
MS.gene63214.t1 MTR_6g040270 26.608 451 230 20 17 448 10 378 7.60e-18 85.5
MS.gene63214.t1 MTR_4g080773 27.083 432 275 17 14 420 18 434 8.71e-18 85.9
MS.gene63214.t1 MTR_4g080773 27.083 432 275 17 14 420 18 434 1.17e-17 85.5
MS.gene63214.t1 MTR_1g085120 25.390 449 254 17 14 450 91 470 2.78e-17 84.3
MS.gene63214.t1 MTR_1g085120 25.333 450 255 17 14 451 166 546 2.91e-17 84.7
MS.gene63214.t1 MTR_2g007500 31.905 210 120 4 2 210 1 188 5.20e-17 82.4
MS.gene63214.t1 MTR_7g056420 27.230 426 216 17 8 427 2 339 9.79e-17 83.6
MS.gene63214.t1 MTR_3g040700 24.088 411 236 10 3 412 31 366 1.18e-16 82.4
MS.gene63214.t1 MTR_8g014220 34.359 195 71 6 14 203 18 160 1.34e-16 77.4
MS.gene63214.t1 MTR_7g056430 27.230 426 216 17 8 427 2 339 1.43e-16 83.2
MS.gene63214.t1 MTR_1g041245 32.487 197 115 6 15 208 11 192 1.45e-16 81.6
MS.gene63214.t1 MTR_2g072720 25.367 477 278 19 14 450 38 476 4.04e-16 80.9
MS.gene63214.t1 MTR_7g115270 23.593 462 253 19 14 448 11 399 4.51e-16 80.1
MS.gene63214.t1 MTR_8g085430 34.112 214 113 9 7 208 2 199 5.02e-16 79.3
MS.gene63214.t1 MTR_3g109982 28.723 470 247 19 9 422 7 444 9.80e-16 80.1
MS.gene63214.t1 MTR_7g033915 25.607 453 221 18 15 450 11 364 1.34e-15 78.6
MS.gene63214.t1 MTR_3g107120 31.553 206 130 6 8 207 2 202 2.55e-15 77.8
MS.gene63214.t1 MTR_7g033990 25.822 426 215 18 15 422 11 353 5.83e-15 77.0
MS.gene63214.t1 MTR_2g007400 30.918 207 126 6 15 211 12 211 8.06e-15 76.3
MS.gene63214.t1 MTR_7g034115 25.962 416 223 14 15 420 11 351 8.94e-15 76.3
MS.gene63214.t1 MTR_5g083890 24.476 429 243 15 14 420 5 374 9.70e-15 76.6
MS.gene63214.t1 MTR_8g014230 57.895 57 23 1 365 421 19 74 2.02e-14 69.3
MS.gene63214.t1 MTR_7g056433 30.348 201 128 5 14 213 11 200 2.43e-14 74.7
MS.gene63214.t1 MTR_5g073370 26.087 414 227 17 15 420 5 347 2.55e-14 74.7
MS.gene63214.t1 MTR_2g005990 30.244 205 127 5 15 210 6 203 3.81e-14 74.3
MS.gene63214.t1 MTR_7g075820 28.436 211 129 5 14 208 5 209 3.97e-14 74.3
MS.gene63214.t1 MTR_7g075820 31.618 136 82 5 318 451 268 394 1.52e-11 66.2
MS.gene63214.t1 MTR_2g008310 30.151 199 120 4 15 210 2 184 5.94e-14 73.6
MS.gene63214.t1 MTR_7g032370 32.065 184 108 6 27 208 2 170 9.90e-14 72.8
MS.gene63214.t1 MTR_7g056447 27.559 254 156 9 14 262 8 238 1.14e-13 71.6
MS.gene63214.t1 MTR_3g107160 28.218 202 129 4 14 211 9 198 2.29e-13 72.0
MS.gene63214.t1 MTR_5g008920 28.761 226 135 6 20 239 17 222 3.51e-13 71.2
MS.gene63214.t1 MTR_6g044572 30.275 218 122 7 15 209 2 212 5.34e-13 70.9
MS.gene63214.t1 MTR_6g044560 30.275 218 122 7 15 209 178 388 6.52e-13 71.2
MS.gene63214.t1 MTR_7g026500 32.864 213 124 10 3 207 1 202 8.15e-13 70.1
MS.gene63214.t1 MTR_0049s0110 23.451 452 288 17 15 450 8 417 8.87e-13 70.1
MS.gene63214.t1 MTR_7g056020 26.634 413 211 18 14 420 15 341 3.37e-12 68.9
MS.gene63214.t1 MTR_7g023310 22.402 433 280 13 14 420 25 427 5.75e-12 67.8
MS.gene63214.t1 MTR_7g039630 26.374 364 199 11 14 355 22 338 5.87e-12 67.0
MS.gene63214.t1 MTR_6g022360 30.653 199 102 7 15 207 43 211 1.63e-11 66.2
MS.gene63214.t1 MTR_3g048290 25.116 430 278 14 15 420 23 432 2.21e-11 66.2
MS.gene63214.t1 MTR_7g034110 29.108 213 128 7 15 223 11 204 2.89e-11 65.1
MS.gene63214.t1 MTR_2g007550 31.111 135 82 3 314 448 209 332 3.08e-11 65.1
MS.gene63214.t1 MTR_1g107385 30.952 210 127 5 11 208 28 231 3.47e-11 65.1
MS.gene63214.t1 MTR_1g108820 33.333 201 106 10 13 207 6 184 4.05e-11 64.7
MS.gene63214.t1 MTR_3g467400 28.019 207 126 7 15 208 3 199 4.31e-11 64.7
MS.gene63214.t1 MTR_1g085120 31.818 198 114 7 14 206 178 359 5.16e-11 65.1
MS.gene63214.t1 MTR_3g105060 28.571 196 123 5 15 208 14 194 7.43e-11 63.9
MS.gene63214.t1 MTR_4g024770 45.312 64 32 1 2 62 8 71 7.60e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63214.t1 AT4G26340 28.293 410 260 15 15 417 2 384 3.98e-29 118
MS.gene63214.t1 AT1G06630 28.453 362 236 10 5 355 2 351 1.66e-27 113
MS.gene63214.t1 AT1G06630 28.453 362 236 10 5 355 2 351 1.66e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 2 351 2.58e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 2 351 2.58e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 2 351 2.58e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 2 351 2.58e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 11 360 2.72e-27 113
MS.gene63214.t1 AT4G00160 27.991 468 292 18 3 451 1 442 4.56e-27 113
MS.gene63214.t1 AT1G06630 28.177 362 237 9 5 355 2 351 4.90e-27 113
MS.gene63214.t1 AT5G22730 25.265 471 282 17 14 448 27 463 2.29e-26 111
MS.gene63214.t1 AT5G22730 25.265 471 282 17 14 448 27 463 2.29e-26 111
MS.gene63214.t1 AT1G06630 29.139 302 205 7 5 305 2 295 5.25e-26 107
MS.gene63214.t1 AT1G78750 27.056 462 291 19 12 448 15 455 5.32e-26 110
MS.gene63214.t1 AT1G78750 27.056 462 291 19 12 448 15 455 5.32e-26 110
MS.gene63214.t1 AT1G69630 27.155 464 275 18 15 448 18 448 8.19e-26 109
MS.gene63214.t1 AT5G53840 25.333 450 298 16 14 451 17 440 1.31e-25 108
MS.gene63214.t1 AT5G60610 26.683 416 258 11 15 417 2 383 2.08e-25 107
MS.gene63214.t1 AT5G60610 26.683 416 258 11 15 417 2 383 2.08e-25 107
MS.gene63214.t1 AT5G56420 27.778 450 279 19 14 450 5 421 5.98e-24 103
MS.gene63214.t1 AT5G56420 27.778 450 279 19 14 450 5 421 5.98e-24 103
MS.gene63214.t1 AT5G56420 27.778 450 279 19 14 450 5 421 5.98e-24 103
MS.gene63214.t1 AT4G10420 28.024 339 219 10 118 450 2 321 6.87e-24 102
MS.gene63214.t1 AT5G53635 26.096 456 283 18 17 450 2 425 8.66e-24 103
MS.gene63214.t1 AT5G56440 27.097 465 273 18 15 450 2 429 8.90e-24 103
MS.gene63214.t1 AT1G78760 24.009 454 306 14 10 448 11 440 1.94e-23 102
MS.gene63214.t1 AT5G22610 25.887 479 289 20 10 449 13 464 1.97e-23 103
MS.gene63214.t1 AT2G26860 29.048 420 253 18 15 417 2 393 2.66e-23 101
MS.gene63214.t1 AT2G26860 29.048 420 253 18 15 417 2 393 2.66e-23 101
MS.gene63214.t1 AT4G10400 25.170 441 291 13 15 450 2 408 9.49e-23 100
MS.gene63214.t1 AT4G10400 25.170 441 291 13 15 450 2 408 9.49e-23 100
MS.gene63214.t1 AT4G10400 25.170 441 291 13 15 450 2 408 9.49e-23 100
MS.gene63214.t1 AT3G44060 26.622 447 292 15 17 449 1 425 1.04e-22 100
MS.gene63214.t1 AT5G22610 25.161 465 280 19 10 449 13 434 1.09e-22 100
MS.gene63214.t1 AT4G00315 24.724 453 312 11 15 451 2 441 2.21e-22 99.4
MS.gene63214.t1 AT1G66310 25.870 460 276 16 15 448 19 439 7.99e-22 97.8
MS.gene63214.t1 AT5G41840 25.926 378 234 13 15 354 14 383 1.50e-21 97.8
MS.gene63214.t1 AT1G16930 25.104 482 291 18 1 448 1 446 1.91e-21 96.7
MS.gene63214.t1 AT1G16930 25.104 482 291 18 1 448 1 446 1.91e-21 96.7
MS.gene63214.t1 AT1G16930 25.104 482 291 18 1 448 1 446 1.91e-21 96.7
MS.gene63214.t1 AT5G38590 26.492 419 258 15 15 420 2 383 5.89e-21 95.1
MS.gene63214.t1 AT2G04230 28.058 417 262 14 14 416 12 404 1.07e-20 94.7
MS.gene63214.t1 AT2G26030 25.427 468 287 22 15 448 4 443 1.08e-20 94.7
MS.gene63214.t1 AT1G51370 24.719 445 295 16 14 448 18 432 2.08e-20 93.6
MS.gene63214.t1 AT2G26030 25.427 468 282 23 15 448 4 438 2.93e-20 93.2
MS.gene63214.t1 AT2G26030 25.427 468 282 23 15 448 4 438 2.93e-20 93.2
MS.gene63214.t1 AT5G44980 24.615 455 301 16 14 450 3 433 3.02e-20 93.2
MS.gene63214.t1 AT5G44980 24.615 455 301 16 14 450 3 433 3.02e-20 93.2
MS.gene63214.t1 AT5G56700 27.439 328 206 10 115 432 52 357 3.59e-20 92.0
MS.gene63214.t1 AT5G56820 28.256 453 262 18 15 448 15 423 4.33e-20 92.8
MS.gene63214.t1 AT5G44950 25.708 459 291 21 14 448 3 435 5.02e-20 92.4
MS.gene63214.t1 AT3G49020 28.641 412 256 13 14 416 21 403 6.57e-20 92.0
MS.gene63214.t1 AT3G52680 26.809 470 293 20 3 451 6 445 1.01e-19 91.7
MS.gene63214.t1 AT1G55660 23.503 451 320 12 15 451 53 492 1.02e-19 92.0
MS.gene63214.t1 AT1G05080 26.096 456 291 16 14 451 12 439 1.06e-19 91.7
MS.gene63214.t1 AT1G56610 27.733 375 233 11 5 355 63 423 1.41e-19 91.7
MS.gene63214.t1 AT3G26930 28.753 473 271 23 5 451 11 443 2.02e-19 90.9
MS.gene63214.t1 AT1G56610 27.717 368 228 11 12 355 7 360 2.30e-19 90.9
MS.gene63214.t1 AT1G66300 24.229 454 295 15 15 448 29 453 3.39e-19 90.1
MS.gene63214.t1 AT5G22700 26.258 457 280 16 15 442 6 434 3.76e-19 89.7
MS.gene63214.t1 AT5G22700 26.258 457 280 16 15 442 6 434 3.76e-19 89.7
MS.gene63214.t1 AT5G22700 26.258 457 280 16 15 442 6 434 3.76e-19 89.7
MS.gene63214.t1 AT5G22700 26.258 457 280 16 15 442 6 434 3.76e-19 89.7
MS.gene63214.t1 AT1G66320 26.039 457 273 19 20 448 35 454 4.32e-19 89.7
MS.gene63214.t1 AT5G62970 23.871 465 290 13 24 451 12 449 5.65e-19 89.4
MS.gene63214.t1 AT5G22700 26.258 457 280 16 15 442 43 471 6.33e-19 89.4
MS.gene63214.t1 AT1G22000 25.210 476 283 19 3 448 17 449 7.43e-19 89.4
MS.gene63214.t1 AT3G50710 24.834 451 294 13 15 448 2 424 8.94e-19 88.6
MS.gene63214.t1 AT1G13780 24.678 466 296 19 15 448 10 452 1.24e-18 88.6
MS.gene63214.t1 AT4G13985 24.313 473 316 18 1 448 1 456 1.46e-18 88.2
MS.gene63214.t1 AT4G13965 28.954 411 250 17 15 416 10 387 3.55e-18 86.7
MS.gene63214.t1 AT3G59200 28.897 263 171 8 15 270 7 260 4.00e-18 85.9
MS.gene63214.t1 AT5G22720 23.431 478 290 17 14 450 22 464 5.53e-18 86.7
MS.gene63214.t1 AT3G59200 28.897 263 171 8 15 270 7 260 6.75e-18 86.7
MS.gene63214.t1 AT5G44960 24.348 460 275 17 15 450 5 415 6.83e-18 85.9
MS.gene63214.t1 AT4G14096 26.304 460 299 18 14 450 7 449 7.32e-18 86.3
MS.gene63214.t1 AT4G14096 26.304 460 299 18 14 450 7 449 7.32e-18 86.3
MS.gene63214.t1 AT5G56370 26.593 455 279 15 15 450 2 420 1.06e-17 85.5
MS.gene63214.t1 AT5G56370 26.593 455 279 15 15 450 2 420 1.06e-17 85.5
MS.gene63214.t1 AT5G22660 25.624 441 262 17 7 416 5 410 1.11e-17 85.5
MS.gene63214.t1 AT3G42770 25.670 448 293 16 17 449 1 423 1.22e-17 85.9
MS.gene63214.t1 AT3G49480 24.374 439 262 18 14 420 11 411 1.91e-17 84.7
MS.gene63214.t1 AT4G09920 27.181 298 189 9 15 305 2 278 1.95e-17 83.2
MS.gene63214.t1 AT4G09920 27.181 298 189 9 15 305 2 278 1.95e-17 83.2
MS.gene63214.t1 AT5G56380 25.482 467 289 16 15 451 2 439 2.29e-17 84.3
MS.gene63214.t1 AT5G56380 25.482 467 289 16 15 451 2 439 2.29e-17 84.3
MS.gene63214.t1 AT4G09920 27.000 300 191 9 15 307 2 280 4.13e-17 82.0
MS.gene63214.t1 AT4G09920 27.000 300 191 9 15 307 2 280 4.13e-17 82.0
MS.gene63214.t1 AT4G09920 27.000 300 191 9 15 307 2 280 4.13e-17 82.0
MS.gene63214.t1 AT3G59230 25.566 442 280 17 6 410 3 432 8.98e-17 82.8
MS.gene63214.t1 AT5G56410 24.941 421 270 12 24 420 12 410 9.49e-17 82.8
MS.gene63214.t1 AT5G56810 26.638 458 271 17 15 448 15 431 1.52e-16 82.0
MS.gene63214.t1 AT3G49030 26.696 457 281 20 14 451 20 441 1.69e-16 82.0
MS.gene63214.t1 AT1G48400 30.837 227 145 5 9 230 4 223 1.73e-16 82.0
MS.gene63214.t1 AT3G58940 25.701 428 273 14 15 422 2 404 2.22e-16 82.0
MS.gene63214.t1 AT3G58940 25.701 428 273 14 15 422 2 404 2.22e-16 82.0
MS.gene63214.t1 AT1G48400 30.837 227 145 5 9 230 4 223 2.54e-16 81.6
MS.gene63214.t1 AT3G58920 24.498 498 284 19 15 451 2 468 3.44e-16 80.9
MS.gene63214.t1 AT3G44810 28.037 321 216 8 17 328 9 323 4.74e-16 80.5
MS.gene63214.t1 AT4G14103 25.490 459 279 20 14 450 7 424 6.37e-16 80.1
MS.gene63214.t1 AT4G14103 27.660 376 227 17 14 383 7 343 6.89e-16 79.3
MS.gene63214.t1 AT4G14103 27.660 376 227 17 14 383 7 343 6.89e-16 79.3
MS.gene63214.t1 AT4G27050 25.527 474 290 19 15 450 4 452 7.01e-16 80.1
MS.gene63214.t1 AT4G27050 25.527 474 290 19 15 450 4 452 7.01e-16 80.1
MS.gene63214.t1 AT4G27050 25.527 474 290 19 15 450 4 452 7.01e-16 80.1
MS.gene63214.t1 AT4G27050 25.527 474 290 19 15 450 4 452 7.01e-16 80.1
MS.gene63214.t1 AT4G27050 25.527 474 290 19 15 450 4 452 7.01e-16 80.1
MS.gene63214.t1 AT5G22730 24.865 370 229 14 14 355 27 375 7.85e-16 79.3
MS.gene63214.t1 AT3G60040 26.184 359 241 13 14 355 12 363 1.30e-15 79.7
MS.gene63214.t1 AT3G60040 26.184 359 241 13 14 355 232 583 1.82e-15 79.3
MS.gene63214.t1 AT3G60040 26.184 359 241 13 14 355 231 582 2.09e-15 79.0
MS.gene63214.t1 AT3G60040 26.184 359 241 13 14 355 229 580 2.14e-15 79.0
MS.gene63214.t1 AT3G60040 26.184 359 241 13 14 355 231 582 2.46e-15 79.0
MS.gene63214.t1 AT3G58980 23.941 472 293 16 15 451 2 442 3.02e-15 78.6
MS.gene63214.t1 AT3G26922 28.904 301 183 13 14 303 13 293 4.45e-15 76.3
MS.gene63214.t1 AT3G26922 28.904 301 183 13 14 303 13 293 4.45e-15 76.3
MS.gene63214.t1 AT5G22700 24.888 446 259 15 15 442 43 430 5.42e-15 77.0
MS.gene63214.t1 AT5G18770 24.946 461 302 15 12 449 21 460 5.76e-15 77.4
MS.gene63214.t1 AT5G44980 27.925 265 165 11 14 266 3 253 7.03e-15 75.5
MS.gene63214.t1 AT5G44980 27.925 265 165 11 14 266 3 253 7.03e-15 75.5
MS.gene63214.t1 AT3G59240 24.788 472 298 21 14 450 7 456 1.07e-14 76.6
MS.gene63214.t1 AT1G13780 28.571 252 156 10 15 252 10 251 1.10e-14 75.5
MS.gene63214.t1 AT2G29930 23.701 481 306 18 6 450 3 458 1.10e-14 76.3
MS.gene63214.t1 AT2G29930 23.701 481 306 18 6 450 3 458 1.10e-14 76.3
MS.gene63214.t1 AT3G49030 25.934 455 261 19 14 451 20 415 1.77e-14 75.5
MS.gene63214.t1 AT5G56690 24.821 419 277 16 17 420 4 399 2.26e-14 75.1
MS.gene63214.t1 AT1G66290 24.449 454 291 20 15 448 29 450 2.84e-14 75.1
MS.gene63214.t1 AT3G58930 23.319 476 317 15 15 450 2 469 3.84e-14 74.7
MS.gene63214.t1 AT3G58930 23.319 476 317 15 15 450 2 469 3.84e-14 74.7
MS.gene63214.t1 AT3G58930 23.319 476 317 15 15 450 2 469 3.84e-14 74.7
MS.gene63214.t1 AT3G58900 26.256 438 275 14 15 420 2 423 4.54e-14 74.3
MS.gene63214.t1 AT5G38390 25.684 475 282 19 15 450 2 444 5.77e-14 73.9
MS.gene63214.t1 AT1G58310 28.622 283 168 10 12 270 5 277 5.81e-14 74.3
MS.gene63214.t1 AT5G38590 26.174 298 189 9 15 305 2 275 6.41e-14 72.4
MS.gene63214.t1 AT5G56390 24.368 435 279 17 34 450 22 424 7.15e-14 73.6
MS.gene63214.t1 AT1G51370 24.242 396 261 14 14 400 18 383 8.80e-14 73.2
MS.gene63214.t1 AT3G59170 27.597 308 162 14 14 276 6 297 1.10e-13 73.2
MS.gene63214.t1 AT3G58860 24.286 420 286 16 15 420 7 408 1.34e-13 72.8
MS.gene63214.t1 AT5G41830 25.405 370 239 13 13 354 11 371 1.54e-13 73.2
MS.gene63214.t1 AT5G35995 24.790 476 294 19 14 450 4 454 2.85e-13 72.0
MS.gene63214.t1 AT5G35995 24.790 476 294 19 14 450 4 454 2.85e-13 72.0
MS.gene63214.t1 AT4G00320 25.199 377 229 15 14 354 12 371 3.02e-13 72.0
MS.gene63214.t1 AT5G44940 24.561 456 236 21 15 448 5 374 3.77e-13 71.2
MS.gene63214.t1 AT5G18780 22.993 461 307 18 9 448 5 438 4.30e-13 71.2
MS.gene63214.t1 AT5G18780 22.993 461 307 18 9 448 5 438 4.30e-13 71.2
MS.gene63214.t1 AT3G54910 25.377 398 249 13 68 450 8 372 4.67e-13 70.9
MS.gene63214.t1 AT3G54910 25.377 398 249 13 68 450 8 372 4.67e-13 70.9
MS.gene63214.t1 AT3G54910 25.377 398 249 13 68 450 8 372 4.67e-13 70.9
MS.gene63214.t1 AT5G56370 27.405 343 214 10 15 353 2 313 4.85e-13 70.5
MS.gene63214.t1 AT1G55660 25.357 280 196 7 15 290 53 323 6.97e-13 70.1
MS.gene63214.t1 AT3G52680 30.268 261 151 12 3 250 6 248 8.13e-13 70.1
MS.gene63214.t1 AT3G51530 25.783 415 264 13 14 416 29 411 8.84e-13 70.5
MS.gene63214.t1 AT1G60400 24.638 414 249 16 15 395 14 397 1.13e-12 69.7
MS.gene63214.t1 AT4G15060 27.097 310 186 12 12 303 169 456 2.62e-12 69.3
MS.gene63214.t1 AT5G56325 26.966 267 170 11 195 450 11 263 1.01e-11 65.5
MS.gene63214.t1 AT1G51370 23.662 355 240 12 14 363 18 346 1.06e-11 66.6
MS.gene63214.t1 AT2G42730 21.397 458 336 12 11 451 1 451 1.67e-11 66.6
MS.gene63214.t1 AT5G56800 26.667 285 181 11 177 451 78 344 1.69e-11 65.9
MS.gene63214.t1 AT3G49480 24.832 298 176 13 144 420 1 271 1.75e-11 65.5
MS.gene63214.t1 AT4G13960 27.322 366 224 14 15 355 2 350 1.89e-11 66.2
MS.gene63214.t1 AT4G13960 27.322 366 224 14 15 355 2 350 1.89e-11 66.2
MS.gene63214.t1 AT3G62440 21.535 469 318 12 15 449 2 454 2.45e-11 65.9
MS.gene63214.t1 AT2G26030 23.822 382 244 19 96 448 2 365 6.22e-11 64.3
MS.gene63214.t1 AT1G52650 23.210 405 247 14 15 401 2 360 8.86e-11 64.3

Find 110 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGTGAATATCTTTCTTTC+TGG 0.130738 8.4:-41500682 MS.gene63214:CDS
GGTTCAACAGATTCACTTTC+AGG 0.185864 8.4:+41500421 None:intergenic
CATCTCAATGAAATTGAATT+TGG 0.194074 8.4:+41499737 None:intergenic
TAAAGCAAATAACGAAATTC+TGG 0.291092 8.4:+41500205 None:intergenic
GACCTTTACTTCTGAACCTT+TGG 0.314656 8.4:-41500632 MS.gene63214:CDS
ATTAAATTTGCAGCATATCT+AGG 0.323413 8.4:-41499907 MS.gene63214:CDS
TGAACCTTTGGCCATACTTC+GGG 0.331951 8.4:-41500620 MS.gene63214:CDS
GCTGGTACGGACGCAGGTTT+TGG 0.332804 8.4:+41501891 None:intergenic
GAGCAAGAGAGAAGGGGTTG+AGG 0.348604 8.4:+41501559 None:intergenic
ATCAGCCATGCAGCAACTAT+TGG 0.363992 8.4:-41500490 MS.gene63214:CDS
GCCGCATATGGCGCAACCTT+TGG 0.364271 8.4:-41501861 MS.gene63214:CDS
TTTGATTCTTCACCTGCATA+TGG 0.374619 8.4:-41499985 MS.gene63214:CDS
GGAAGTTGGCACCCGAAGTA+TGG 0.375232 8.4:+41500609 None:intergenic
TTTCAATTACAAGACTCTTC+GGG 0.379284 8.4:-41500766 MS.gene63214:CDS
TTGAAGACAATGCTTATTGA+TGG 0.381889 8.4:-41499832 MS.gene63214:CDS
CCAGCCTCGTCTGCCGCATA+TGG 0.390696 8.4:-41501873 MS.gene63214:CDS
GTTTCAATTACAAGACTCTT+CGG 0.396791 8.4:-41500767 MS.gene63214:CDS
AGCAAGAGAGAAGGGGTTGA+GGG 0.402831 8.4:+41501560 None:intergenic
CTGCCACATTCTCGAAGATC+TGG 0.407855 8.4:-41500659 MS.gene63214:CDS
CTGAACCTTTGGCCATACTT+CGG 0.415519 8.4:-41500621 MS.gene63214:CDS
ATTATCGTTGACACTAAAGT+TGG 0.418001 8.4:-41500571 MS.gene63214:CDS
TTCAACCTCTTCAAGGAAGT+TGG 0.419093 8.4:+41500595 None:intergenic
CAGCTCGAGATGTTTAATTC+CGG 0.420771 8.4:+41500372 None:intergenic
ATTCTGGAAAATCTGAAGTT+GGG 0.421868 8.4:+41500221 None:intergenic
TTATCGTTGACACTAAAGTT+GGG 0.428962 8.4:-41500570 MS.gene63214:CDS
AATTCTGGAAAATCTGAAGT+TGG 0.433100 8.4:+41500220 None:intergenic
TGATAGAATGTGATGCAGTA+TGG 0.453870 8.4:+41501924 None:intergenic
ATTATCAGAGTTTGCAGGAT+AGG 0.455635 8.4:+41500121 None:intergenic
GTATCTCTTGGATTTGAATC+CGG 0.457351 8.4:-41500701 MS.gene63214:CDS
TGAATGTACCTCAGTCTCTC+TGG 0.459482 8.4:-41500799 MS.gene63214:intron
ATATGCTGCAAATTTAATAA+AGG 0.461660 8.4:+41499912 None:intergenic
TGAATATTATCAGAGTTTGC+AGG 0.462707 8.4:+41500116 None:intergenic
AGACACTTGGGAACACTTTG+AGG 0.466473 8.4:+41499949 None:intergenic
ATTCTTCACCTGCATATGGA+TGG 0.467974 8.4:-41499981 MS.gene63214:CDS
TCTAGGACATTTAAATGAGC+TGG 0.471859 8.4:-41499890 MS.gene63214:CDS
GATCAGGCGTGTCTATTTCA+AGG 0.473258 8.4:+41500542 None:intergenic
CCATATGCGGCAGACGAGGC+TGG 0.474582 8.4:+41501873 None:intergenic
ACTACTAGACATGTATCTCT+TGG 0.487664 8.4:-41500713 MS.gene63214:CDS
ATTCTACATGATGGATGAAC+CGG 0.488582 8.4:-41499809 MS.gene63214:CDS
AGACTGTTCATCCTGTCCTC+TGG 0.491081 8.4:+41501955 None:intergenic
GCTCCAACCTAGTGTCCATC+AGG 0.491550 8.4:-41501540 MS.gene63214:intron
AGGCTAAGGTACTTGAGATC+AGG 0.500946 8.4:+41500526 None:intergenic
TAGGTTGGAGCAAGAGAGAA+GGG 0.503080 8.4:+41501552 None:intergenic
CAAATGTGATACAAGACACT+TGG 0.504511 8.4:+41499936 None:intergenic
GTTTAATTCCGGAGAGAGCT+CGG 0.505622 8.4:+41500383 None:intergenic
AATCTCCTCCGAGCTCTCTC+CGG 0.506677 8.4:-41500391 MS.gene63214:CDS
AAGAGAGAAGAAAGAGCTCT+AGG 0.509079 8.4:+41500182 None:intergenic
GGCCAAAGGTTCAGAAGTAA+AGG 0.512790 8.4:+41500630 None:intergenic
GAGTACATCATTGACGAAAA+CGG 0.513871 8.4:+41501753 None:intergenic
TCGATTGAGTGAGCAAAGAA+TGG 0.515884 8.4:+41501667 None:intergenic
TTGTAACATTGGTGAGGCTA+AGG 0.522260 8.4:+41500512 None:intergenic
GTCCTCTGGTCTCAGCCGAA+TGG 0.528997 8.4:+41501969 None:intergenic
TGCGGCAGACGAGGCTGGTA+CGG 0.529251 8.4:+41501878 None:intergenic
GGATGAACCGGAGGAGTGGA+AGG 0.529506 8.4:-41499797 MS.gene63214:CDS
TCCGACGATGGTATCGATCC+AGG 0.530084 8.4:+41501642 None:intergenic
TTACCTGATGGACACTAGGT+TGG 0.536510 8.4:+41501537 None:intergenic
CATGGTCGTGGAACATGTAG+TGG 0.537491 8.4:+41501803 None:intergenic
ACAGATTCACTTTCAGGAGT+GGG 0.541743 8.4:+41500427 None:intergenic
GAGCAAAGAATGGATCGGAC+GGG 0.544385 8.4:+41501677 None:intergenic
TGGAAGAGTCGAGCTCCATT+CGG 0.544886 8.4:-41501984 MS.gene63214:CDS
GGGTGCCAACTTCCTTGAAG+AGG 0.544921 8.4:-41500600 MS.gene63214:CDS
CTAGGTTGGAGCAAGAGAGA+AGG 0.550644 8.4:+41501551 None:intergenic
TTGCTCACTCAATCGAGACC+TGG 0.550778 8.4:-41501660 MS.gene63214:CDS
TTTGTCACCCATCCATATGC+AGG 0.552383 8.4:+41499973 None:intergenic
TATCGTTGACACTAAAGTTG+GGG 0.556368 8.4:-41500569 MS.gene63214:CDS
GCAGCACTTTCAATGACGGC+AGG 0.556471 8.4:+41500737 None:intergenic
ATGTTTGAAGATTCTTCCAA+AGG 0.557131 8.4:+41501845 None:intergenic
TTTCCAGATCTTCGAGAATG+TGG 0.557261 8.4:+41500656 None:intergenic
TTCGGCTGAGACCAGAGGAC+AGG 0.559660 8.4:-41501966 MS.gene63214:CDS
TGGCACATCGTCGATCCCCT+TGG 0.560902 8.4:+41499757 None:intergenic
CTCACCATCCACTGTCTCGA+AGG 0.561407 8.4:-41501598 MS.gene63214:CDS
AACAGATTCACTTTCAGGAG+TGG 0.562125 8.4:+41500426 None:intergenic
TGAGCAAAGAATGGATCGGA+CGG 0.563287 8.4:+41501676 None:intergenic
ATTATTACCTGATGGACACT+AGG 0.563913 8.4:+41501533 None:intergenic
AGCAAAGAATGGATCGGACG+GGG 0.571010 8.4:+41501678 None:intergenic
TATTGATGGATTCTACATGA+TGG 0.574712 8.4:-41499818 MS.gene63214:CDS
TTCTGGAAAATCTGAAGTTG+GGG 0.575072 8.4:+41500222 None:intergenic
TGCATGGCTGATTGTAACAT+TGG 0.576313 8.4:+41500501 None:intergenic
CCAGAAAGAAAGATATTCAC+CGG 0.581901 8.4:+41500682 None:intergenic
ATGTGATGCAGTATGGAGAT+TGG 0.586129 8.4:+41501931 None:intergenic
TGCGCCATATGCGGCAGACG+AGG 0.588220 8.4:+41501869 None:intergenic
ATGATGTACTCTCTCTTCGT+AGG 0.590314 8.4:-41501741 MS.gene63214:CDS
TCCAAAGGTTGCGCCATATG+CGG 0.591875 8.4:+41501860 None:intergenic
TTCTTCACCTGCATATGGAT+GGG 0.595592 8.4:-41499980 MS.gene63214:CDS
GCTCGGAGGAGATTGAGTAA+AGG 0.595653 8.4:+41500400 None:intergenic
AGTTGCAGCACTTTCAATGA+CGG 0.598450 8.4:+41500733 None:intergenic
TGATGGATGAACCGGAGGAG+TGG 0.598627 8.4:-41499801 MS.gene63214:CDS
CGAAACGGCGGCGATGATGG+TGG 0.599808 8.4:-41502004 None:intergenic
GCTGTTTAGTTCAACAACAA+AGG 0.604630 8.4:-41500353 MS.gene63214:intron
GACTCCTTCGAGACAGTGGA+TGG 0.608845 8.4:+41501594 None:intergenic
CTCCATTCGGCTGAGACCAG+AGG 0.615119 8.4:-41501971 MS.gene63214:CDS
AAATGTGATACAAGACACTT+GGG 0.619822 8.4:+41499937 None:intergenic
CTCGAGGTGAGGTCCGACGA+TGG 0.620609 8.4:+41501630 None:intergenic
GACGAGGCTGGTACGGACGC+AGG 0.633374 8.4:+41501885 None:intergenic
ATGCGACTCCTTCGAGACAG+TGG 0.639411 8.4:+41501590 None:intergenic
GGCACCCGAAGTATGGCCAA+AGG 0.649858 8.4:+41500616 None:intergenic
AGATGAAATTCCTCGAGGTG+AGG 0.654061 8.4:+41501619 None:intergenic
CATCGTCGGACCTCACCTCG+AGG 0.662938 8.4:-41501629 MS.gene63214:CDS
AGTTTCCAATAGTTGCTGCA+TGG 0.666899 8.4:+41500485 None:intergenic
CTACATGATGGATGAACCGG+AGG 0.668788 8.4:-41499806 MS.gene63214:CDS
TATTGGAAACTTGCACATCG+TGG 0.679007 8.4:-41500473 MS.gene63214:CDS
GGCTGATTGTAACATTGGTG+AGG 0.682471 8.4:+41500506 None:intergenic
TCTGATAATATTCAATGACA+AGG 0.686714 8.4:-41500107 MS.gene63214:intron
ACCTGGATCGATACCATCGT+CGG 0.687724 8.4:-41501643 MS.gene63214:CDS
GCAGGTGAAGAATCAAACGA+TGG 0.688170 8.4:+41499991 None:intergenic
TGAGTGAGCAAAGAATGGAT+CGG 0.695770 8.4:+41501672 None:intergenic
AAAATTTCTGATCTGCCAAG+GGG 0.695820 8.4:-41499772 MS.gene63214:CDS
AGGTTGGAGCAAGAGAGAAG+GGG 0.706039 8.4:+41501553 None:intergenic
TAATTCCGGAGAGAGCTCGG+AGG 0.748060 8.4:+41500386 None:intergenic
TGGTGAGATGAAATTCCTCG+AGG 0.807837 8.4:+41501614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAACATATATACAA+CGG + chr8.4:41500466-41500485 None:intergenic 10.0%
!! AAAGAAAAAAACGATTATTT+AGG - chr8.4:41500759-41500778 MS.gene63214:CDS 15.0%
!! ATCAATTAAGAGTTAAATAA+AGG + chr8.4:41500593-41500612 None:intergenic 15.0%
!! ATATGCTGCAAATTTAATAA+AGG + chr8.4:41501823-41501842 None:intergenic 20.0%
!!! CTTTTTCTAATGACATAAAT+TGG + chr8.4:41500542-41500561 None:intergenic 20.0%
!!! GTTAGATATGTTTTTCAAAA+TGG - chr8.4:41501870-41501889 MS.gene63214:CDS 20.0%
! ATTAAATTTGCAGCATATCT+AGG - chr8.4:41501825-41501844 MS.gene63214:CDS 25.0%
! TAAAGCAAATAACGAAATTC+TGG + chr8.4:41501530-41501549 None:intergenic 25.0%
! TCTGATAATATTCAATGACA+AGG - chr8.4:41501625-41501644 MS.gene63214:CDS 25.0%
!! TCCTATAGTTTTTACATTAG+CGG + chr8.4:41500435-41500454 None:intergenic 25.0%
!!! GATTTATTTTGAACGTGATT+TGG - chr8.4:41500905-41500924 MS.gene63214:intron 25.0%
!!! TGATGGTCACTTATTTTTAT+TGG - chr8.4:41500870-41500889 MS.gene63214:intron 25.0%
AAAAAATTTCTGATCTGCCA+AGG - chr8.4:41501958-41501977 MS.gene63214:CDS 30.0%
AAAAATTTCTGATCTGCCAA+GGG - chr8.4:41501959-41501978 MS.gene63214:CDS 30.0%
AAATGTGATACAAGACACTT+GGG + chr8.4:41501798-41501817 None:intergenic 30.0%
ACCGCTAATGTAAAAACTAT+AGG - chr8.4:41500431-41500450 MS.gene63214:CDS 30.0%
ATGTTTGAAGATTCTTCCAA+AGG + chr8.4:41499890-41499909 None:intergenic 30.0%
ATTATCGTTGACACTAAAGT+TGG - chr8.4:41501161-41501180 MS.gene63214:intron 30.0%
ATTCTGCTTATAATAGTGAC+CGG + chr8.4:41500250-41500269 None:intergenic 30.0%
GTTTCAATTACAAGACTCTT+CGG - chr8.4:41500965-41500984 MS.gene63214:intron 30.0%
TAACATATATACAACGGTGT+CGG + chr8.4:41500460-41500479 None:intergenic 30.0%
TGAATATTATCAGAGTTTGC+AGG + chr8.4:41501619-41501638 None:intergenic 30.0%
TTATCGTTGACACTAAAGTT+GGG - chr8.4:41501162-41501181 MS.gene63214:intron 30.0%
TTGAAGACAATGCTTATTGA+TGG - chr8.4:41501900-41501919 MS.gene63214:CDS 30.0%
TTTCAATTACAAGACTCTTC+GGG - chr8.4:41500966-41500985 MS.gene63214:intron 30.0%
! AAAACGATTATTTAGGACAC+CGG - chr8.4:41500766-41500785 MS.gene63214:CDS 30.0%
! AATTCTGGAAAATCTGAAGT+TGG + chr8.4:41501515-41501534 None:intergenic 30.0%
! ATTCTGGAAAATCTGAAGTT+GGG + chr8.4:41501514-41501533 None:intergenic 30.0%
! GATAATTTTCAACCTCTTCA+AGG + chr8.4:41501147-41501166 None:intergenic 30.0%
! TTTTAAATATCTGTCCGACA+CGG - chr8.4:41500684-41500703 MS.gene63214:CDS 30.0%
!! TATTGATGGATTCTACATGA+TGG - chr8.4:41501914-41501933 MS.gene63214:CDS 30.0%
AAAATTTCTGATCTGCCAAG+GGG - chr8.4:41501960-41501979 MS.gene63214:CDS 35.0%
ACTACTAGACATGTATCTCT+TGG - chr8.4:41501019-41501038 MS.gene63214:intron 35.0%
ACTCTTGTATCTATAGTGTG+CGG - chr8.4:41500636-41500655 MS.gene63214:CDS 35.0%
ATTATCAGAGTTTGCAGGAT+AGG + chr8.4:41501614-41501633 None:intergenic 35.0%
CAAATGTGATACAAGACACT+TGG + chr8.4:41501799-41501818 None:intergenic 35.0%
CCAGAAAGAAAGATATTCAC+CGG + chr8.4:41501053-41501072 None:intergenic 35.0%
GAGTACATCATTGACGAAAA+CGG + chr8.4:41499982-41500001 None:intergenic 35.0%
GGCTCTTATGAGTGTTATAT+AGG - chr8.4:41500705-41500724 MS.gene63214:CDS 35.0%
GTATCTCTTGGATTTGAATC+CGG - chr8.4:41501031-41501050 MS.gene63214:intron 35.0%
TATCGTTGACACTAAAGTTG+GGG - chr8.4:41501163-41501182 MS.gene63214:intron 35.0%
TGAAAGGGATTATTACCTGA+TGG + chr8.4:41500210-41500229 None:intergenic 35.0%
TGATAGAATGTGATGCAGTA+TGG + chr8.4:41499811-41499830 None:intergenic 35.0%
TTTGATTCTTCACCTGCATA+TGG - chr8.4:41501747-41501766 MS.gene63214:CDS 35.0%
! AGAACTGTTCGATGTTTTCA+TGG + chr8.4:41499950-41499969 None:intergenic 35.0%
! ATTATTACCTGATGGACACT+AGG + chr8.4:41500202-41500221 None:intergenic 35.0%
! GCTGTTTAGTTCAACAACAA+AGG - chr8.4:41501379-41501398 MS.gene63214:intron 35.0%
! TCTAGGACATTTAAATGAGC+TGG - chr8.4:41501842-41501861 MS.gene63214:CDS 35.0%
! TTCTGGAAAATCTGAAGTTG+GGG + chr8.4:41501513-41501532 None:intergenic 35.0%
!! ATTCTACATGATGGATGAAC+CGG - chr8.4:41501923-41501942 MS.gene63214:CDS 35.0%
AACAGATTCACTTTCAGGAG+TGG + chr8.4:41501309-41501328 None:intergenic 40.0%
AAGAGAGAAGAAAGAGCTCT+AGG + chr8.4:41501553-41501572 None:intergenic 40.0%
AATCAAACGATGGATCCATC+TGG + chr8.4:41501734-41501753 None:intergenic 40.0%
ACAGATTCACTTTCAGGAGT+GGG + chr8.4:41501308-41501327 None:intergenic 40.0%
AGATATATCCAGAGAGACTG+AGG + chr8.4:41500944-41500963 None:intergenic 40.0%
AGTTGCAGCACTTTCAATGA+CGG + chr8.4:41501002-41501021 None:intergenic 40.0%
AGTTTCCAATAGTTGCTGCA+TGG + chr8.4:41501250-41501269 None:intergenic 40.0%
ATGATGTACTCTCTCTTCGT+AGG - chr8.4:41499991-41500010 MS.gene63214:CDS 40.0%
ATGTGATGCAGTATGGAGAT+TGG + chr8.4:41499804-41499823 None:intergenic 40.0%
ATTCTTCACCTGCATATGGA+TGG - chr8.4:41501751-41501770 MS.gene63214:CDS 40.0%
CAGCTCGAGATGTTTAATTC+CGG + chr8.4:41501363-41501382 None:intergenic 40.0%
CAGTGATGATCTATGAAGCA+TGG - chr8.4:41500362-41500381 MS.gene63214:CDS 40.0%
CCGGTGAATATCTTTCTTTC+TGG - chr8.4:41501050-41501069 MS.gene63214:intron 40.0%
CGGATGGAGAAAGAATGAAA+GGG + chr8.4:41500225-41500244 None:intergenic 40.0%
GACCTTTACTTCTGAACCTT+TGG - chr8.4:41501100-41501119 MS.gene63214:intron 40.0%
GCTTATAATAGTGACCGGAT+CGG + chr8.4:41500245-41500264 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG + chr8.4:41501314-41501333 None:intergenic 40.0%
TATTGGAAACTTGCACATCG+TGG - chr8.4:41501259-41501278 MS.gene63214:intron 40.0%
TCGATTGAGTGAGCAAAGAA+TGG + chr8.4:41500068-41500087 None:intergenic 40.0%
TCGGATGGAGAAAGAATGAA+AGG + chr8.4:41500226-41500245 None:intergenic 40.0%
TGAGTGAGCAAAGAATGGAT+CGG + chr8.4:41500063-41500082 None:intergenic 40.0%
TGCATGGCTGATTGTAACAT+TGG + chr8.4:41501234-41501253 None:intergenic 40.0%
TTCAACCTCTTCAAGGAAGT+TGG + chr8.4:41501140-41501159 None:intergenic 40.0%
TTCTTCACCTGCATATGGAT+GGG - chr8.4:41501752-41501771 MS.gene63214:CDS 40.0%
TTGTAACATTGGTGAGGCTA+AGG + chr8.4:41501223-41501242 None:intergenic 40.0%
TTTCCAGATCTTCGAGAATG+TGG + chr8.4:41501079-41501098 None:intergenic 40.0%
!!! ATTTTTTCCTTCCACTCCTC+CGG + chr8.4:41501945-41501964 None:intergenic 40.0%
AACACTCATAAGAGCCGTGT+CGG + chr8.4:41500701-41500720 None:intergenic 45.0%
AGACACTTGGGAACACTTTG+AGG + chr8.4:41501786-41501805 None:intergenic 45.0%
AGATGAAATTCCTCGAGGTG+AGG + chr8.4:41500116-41500135 None:intergenic 45.0%
ATAATAGTGACCGGATCGGA+TGG + chr8.4:41500241-41500260 None:intergenic 45.0%
ATCAGCCATGCAGCAACTAT+TGG - chr8.4:41501242-41501261 MS.gene63214:intron 45.0%
ATGGATCCATCTGGCAACAA+GGG + chr8.4:41501725-41501744 None:intergenic 45.0%
CATTCTTTCTCCATCCGATC+CGG - chr8.4:41500228-41500247 MS.gene63214:CDS 45.0%
CTGAACCTTTGGCCATACTT+CGG - chr8.4:41501111-41501130 MS.gene63214:intron 45.0%
CTGTTGTCATGTACTTGCAG+TGG - chr8.4:41501477-41501496 MS.gene63214:intron 45.0%
GATCAGGCGTGTCTATTTCA+AGG + chr8.4:41501193-41501212 None:intergenic 45.0%
GCAGGTGAAGAATCAAACGA+TGG + chr8.4:41501744-41501763 None:intergenic 45.0%
GGCCAAAGGTTCAGAAGTAA+AGG + chr8.4:41501105-41501124 None:intergenic 45.0%
GGCTGATTGTAACATTGGTG+AGG + chr8.4:41501229-41501248 None:intergenic 45.0%
GTTTAATTCCGGAGAGAGCT+CGG + chr8.4:41501352-41501371 None:intergenic 45.0%
TACTTCGACACTCCTACGAT+CGG + chr8.4:41500740-41500759 None:intergenic 45.0%
TGAACCTTTGGCCATACTTC+GGG - chr8.4:41501112-41501131 MS.gene63214:intron 45.0%
TGAATGTACCTCAGTCTCTC+TGG - chr8.4:41500933-41500952 MS.gene63214:intron 45.0%
TGACCATCACCTATGAAGCA+CGG + chr8.4:41500859-41500878 None:intergenic 45.0%
TGAGCAAAGAATGGATCGGA+CGG + chr8.4:41500059-41500078 None:intergenic 45.0%
TGGTGAGATGAAATTCCTCG+AGG + chr8.4:41500121-41500140 None:intergenic 45.0%
TTTGTCACCCATCCATATGC+AGG + chr8.4:41501762-41501781 None:intergenic 45.0%
! AGGCTAAGGTACTTGAGATC+AGG + chr8.4:41501209-41501228 None:intergenic 45.0%
! GTTCGATGTTTTCATGGTCG+TGG + chr8.4:41499944-41499963 None:intergenic 45.0%
! TACAGGTGTCAAAGGAGTGT+CGG - chr8.4:41500803-41500822 MS.gene63214:intron 45.0%
! TAGGTTGGAGCAAGAGAGAA+GGG + chr8.4:41500183-41500202 None:intergenic 45.0%
! TTACCTGATGGACACTAGGT+TGG + chr8.4:41500198-41500217 None:intergenic 45.0%
!!! ATTTTAATTTTAATTTTAGA+CGG + chr8.4:41500496-41500515 None:intergenic 5.0%
ACCTGGATCGATACCATCGT+CGG - chr8.4:41500089-41500108 MS.gene63214:intron 50.0%
ACGTGTCGTACAGGTGTCAA+AGG - chr8.4:41500795-41500814 MS.gene63214:intron 50.0%
AGACTGTTCATCCTGTCCTC+TGG + chr8.4:41499780-41499799 None:intergenic 50.0%
AGCAAAGAATGGATCGGACG+GGG + chr8.4:41500057-41500076 None:intergenic 50.0%
AGCAAGAGAGAAGGGGTTGA+GGG + chr8.4:41500175-41500194 None:intergenic 50.0%
AGGTTGGAGCAAGAGAGAAG+GGG + chr8.4:41500182-41500201 None:intergenic 50.0%
CACCTGACACGACACTGATA+CGG - chr8.4:41500398-41500417 MS.gene63214:CDS 50.0%
CATGGTCGTGGAACATGTAG+TGG + chr8.4:41499932-41499951 None:intergenic 50.0%
CTGCCACATTCTCGAAGATC+TGG - chr8.4:41501073-41501092 MS.gene63214:intron 50.0%
GAGCAAAGAATGGATCGGAC+GGG + chr8.4:41500058-41500077 None:intergenic 50.0%
GATGGATCCATCTGGCAACA+AGG + chr8.4:41501726-41501745 None:intergenic 50.0%
GCTCGGAGGAGATTGAGTAA+AGG + chr8.4:41501335-41501354 None:intergenic 50.0%
GTCGTGTCAGGTGTCTATGT+CGG + chr8.4:41500391-41500410 None:intergenic 50.0%
TATGAAGCACGGACACCTCA+AGG + chr8.4:41500848-41500867 None:intergenic 50.0%
TCCAAAGGTTGCGCCATATG+CGG + chr8.4:41499875-41499894 None:intergenic 50.0%
TGGAAGAGTCGAGCTCCATT+CGG - chr8.4:41499748-41499767 MS.gene63214:CDS 50.0%
TGGATCCATCTGGCAACAAG+GGG + chr8.4:41501724-41501743 None:intergenic 50.0%
TGTCCGTGCTTCATAGGTGA+TGG - chr8.4:41500853-41500872 MS.gene63214:intron 50.0%
TTGCTCACTCAATCGAGACC+TGG - chr8.4:41500072-41500091 MS.gene63214:intron 50.0%
! CTAGGTTGGAGCAAGAGAGA+AGG + chr8.4:41500184-41500203 None:intergenic 50.0%
! TTGAGGTGTCCGTGCTTCAT+AGG - chr8.4:41500847-41500866 MS.gene63214:intron 50.0%
!! CTACATGATGGATGAACCGG+AGG - chr8.4:41501926-41501945 MS.gene63214:CDS 50.0%
!! TACGGACGCAGGTTTTGGTA+GGG + chr8.4:41499839-41499858 None:intergenic 50.0%
AATCTCCTCCGAGCTCTCTC+CGG - chr8.4:41501341-41501360 MS.gene63214:intron 55.0%
AGGTGTCAGACACCGATCGT+AGG - chr8.4:41500725-41500744 MS.gene63214:CDS 55.0%
AGTTGCCCCTTGTTGCCAGA+TGG - chr8.4:41501716-41501735 MS.gene63214:CDS 55.0%
ATGCGACTCCTTCGAGACAG+TGG + chr8.4:41500145-41500164 None:intergenic 55.0%
CTCACCATCCACTGTCTCGA+AGG - chr8.4:41500134-41500153 MS.gene63214:CDS 55.0%
CTGTACGACACGTGTCGAAC+CGG + chr8.4:41500788-41500807 None:intergenic 55.0%
GACTCCTTCGAGACAGTGGA+TGG + chr8.4:41500141-41500160 None:intergenic 55.0%
GAGCAAGAGAGAAGGGGTTG+AGG + chr8.4:41500176-41500195 None:intergenic 55.0%
GCAGCACTTTCAATGACGGC+AGG + chr8.4:41500998-41501017 None:intergenic 55.0%
GCTCCAACCTAGTGTCCATC+AGG - chr8.4:41500192-41500211 MS.gene63214:CDS 55.0%
GGAAGTTGGCACCCGAAGTA+TGG + chr8.4:41501126-41501145 None:intergenic 55.0%
GGGTGCCAACTTCCTTGAAG+AGG - chr8.4:41501132-41501151 MS.gene63214:intron 55.0%
GTCCGTATCAGTGTCGTGTC+AGG + chr8.4:41500403-41500422 None:intergenic 55.0%
TAATTCCGGAGAGAGCTCGG+AGG + chr8.4:41501349-41501368 None:intergenic 55.0%
! TGATGGATGAACCGGAGGAG+TGG - chr8.4:41501931-41501950 MS.gene63214:CDS 55.0%
!! GTACGGACGCAGGTTTTGGT+AGG + chr8.4:41499840-41499859 None:intergenic 55.0%
!! TCCGACGATGGTATCGATCC+AGG + chr8.4:41500093-41500112 None:intergenic 55.0%
CGGTTCGACACGTGTCGTAC+AGG - chr8.4:41500786-41500805 MS.gene63214:CDS 60.0%
CTCAAGGACTAGGCGTGTCG+CGG + chr8.4:41500832-41500851 None:intergenic 60.0%
CTCCATTCGGCTGAGACCAG+AGG - chr8.4:41499761-41499780 MS.gene63214:CDS 60.0%
GCACGGACACCTCAAGGACT+AGG + chr8.4:41500842-41500861 None:intergenic 60.0%
GCCGCATATGGCGCAACCTT+TGG - chr8.4:41499871-41499890 MS.gene63214:CDS 60.0%
GGATGAACCGGAGGAGTGGA+AGG - chr8.4:41501935-41501954 MS.gene63214:CDS 60.0%
GGCACCCGAAGTATGGCCAA+AGG + chr8.4:41501119-41501138 None:intergenic 60.0%
GTCCTCTGGTCTCAGCCGAA+TGG + chr8.4:41499766-41499785 None:intergenic 60.0%
TGGCACATCGTCGATCCCCT+TGG + chr8.4:41501978-41501997 None:intergenic 60.0%
TTCGGCTGAGACCAGAGGAC+AGG - chr8.4:41499766-41499785 MS.gene63214:CDS 60.0%
! GCTGGTACGGACGCAGGTTT+TGG + chr8.4:41499844-41499863 None:intergenic 60.0%
CATCGTCGGACCTCACCTCG+AGG - chr8.4:41500103-41500122 MS.gene63214:intron 65.0%
CCAGCCTCGTCTGCCGCATA+TGG - chr8.4:41499859-41499878 MS.gene63214:CDS 65.0%
CCATATGCGGCAGACGAGGC+TGG + chr8.4:41499862-41499881 None:intergenic 65.0%
CGCGACACGCCTAGTCCTTG+AGG - chr8.4:41500830-41500849 MS.gene63214:intron 65.0%
CTCGAGGTGAGGTCCGACGA+TGG + chr8.4:41500105-41500124 None:intergenic 65.0%
TGCGCCATATGCGGCAGACG+AGG + chr8.4:41499866-41499885 None:intergenic 65.0%
TGCGGCAGACGAGGCTGGTA+CGG + chr8.4:41499857-41499876 None:intergenic 65.0%
GACGAGGCTGGTACGGACGC+AGG + chr8.4:41499850-41499869 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 41499741 41502013 41499741 ID=MS.gene63214
chr8.4 mRNA 41499741 41502013 41499741 ID=MS.gene63214.t1;Parent=MS.gene63214
chr8.4 exon 41501541 41502013 41501541 ID=MS.gene63214.t1.exon1;Parent=MS.gene63214.t1
chr8.4 CDS 41501541 41502013 41501541 ID=cds.MS.gene63214.t1;Parent=MS.gene63214.t1
chr8.4 exon 41500354 41500807 41500354 ID=MS.gene63214.t1.exon2;Parent=MS.gene63214.t1
chr8.4 CDS 41500354 41500807 41500354 ID=cds.MS.gene63214.t1;Parent=MS.gene63214.t1
chr8.4 exon 41500108 41500257 41500108 ID=MS.gene63214.t1.exon3;Parent=MS.gene63214.t1
chr8.4 CDS 41500108 41500257 41500108 ID=cds.MS.gene63214.t1;Parent=MS.gene63214.t1
chr8.4 exon 41499741 41500019 41499741 ID=MS.gene63214.t1.exon4;Parent=MS.gene63214.t1
chr8.4 CDS 41499741 41500019 41499741 ID=cds.MS.gene63214.t1;Parent=MS.gene63214.t1
Gene Sequence

>MS.gene63214

ATGATGGTGGAAGAGTCGAGCTCCATTCGGCTGAGACCAGAGGACAGGATGAACAGTCTACCAATCTCCATACTGCATCACATTCTATCATTTCTCCCTACCAAAACCTGCGTCCGTACCAGCCTCGTCTGCCGCATATGGCGCAACCTTTGGAAGAATCTTCAAACATTCAACTTCTGCGATAACTTCCACTACATGTTCCACGACCATGAAAACATCGAACAGTTCTTGCGTTTCACCGTTTTCGTCAATGATGTACTCTCTCTTCGTAGGTCACGCGACACTCGCAAGTTTCATCTCTCTTGCGCTCATTCCCCGTCCGATCCATTCTTTGCTCACTCAATCGAGACCTGGATCGATACCATCGTCGGACCTCACCTCGAGGAATTTCATCTCACCATCCACTGTCTCGAAGGAGTCGCATTCAATCTCCCTCAACCCCTTCTCTCTTGCTCCAACCTAGTGTCCATCAGGTAATAATCCCTTTCATTCTTTCTCCATCCGATCCGGTCACTATTATAAGCAGAATTCACTTTTCTCTAATTCATTGAGCAACTAATGTATTTACTGTTTAGTCTCATAATTATTCAATGAATATGCAAAATAAATTTTTGCTTACAACAGTGATGATCTATGAAGCATGGACTCCGACATAGACACCTGACACGACACTGATACGGACACGTCGACACCGCTAATGTAAAAACTATAGGACACCGACACCGTTGTATATATGTTAATTTATTTTAAGACCGTCTAAAATTAAAATTAAAATACATATATAAACATCTAACTCGACCAATTTATGTCATTAGAAAAAGTTCTACAACAAGATATCATAGTATTTGACCTTTATTTAACTCTTAATTGATCAACATTTCTCAAAACATATGCAACTCTTGTATCTATAGTGTGCGGAAAGCAGAGAGATTTTTTTTTTTTGTTTTAAATATCTGTCCGACACGGCTCTTATGAGTGTTATATAGGTGTCAGACACCGATCGTAGGAGTGTCGAAGTAAAGAAAAAAACGATTATTTAGGACACCGGTTCGACACGTGTCGTACAGGTGTCAAAGGAGTGTCGGACACCGCGACACGCCTAGTCCTTGAGGTGTCCGTGCTTCATAGGTGATGGTCACTTATTTTTATTGGCTCTAGTGTTCTGATTTATTTTGAACGTGATTTGGTGATTTGAATGTACCTCAGTCTCTCTGGATATATCTTGTTTCAATTACAAGACTCTTCGGGTATTCACCTGCCGTCATTGAAAGTGCTGCAACTACTAGACATGTATCTCTTGGATTTGAATCCGGTGAATATCTTTCTTTCTGGCTGCCACATTCTCGAAGATCTGGAAATGACCTTTACTTCTGAACCTTTGGCCATACTTCGGGTGCCAACTTCCTTGAAGAGGTTGAAAATTATCGTTGACACTAAAGTTGGGGCTTGCCTTGAAATAGACACGCCTGATCTCAAGTACCTTAGCCTCACCAATGTTACAATCAGCCATGCAGCAACTATTGGAAACTTGCACATCGTGGAAGAAGCATTTCTTGATGTACTTCCCACTCCTGAAAGTGAATCTGTTGAACCTTTACTCAATCTCCTCCGAGCTCTCTCCGGAATTAAACATCTCGAGCTGTTTAGTTCAACAACAAAGGTGTCATAAGTCTCGATTATTTGTATTGTATGTAGTTTTTTCACTAGTAACTATAAAATAATCAGTTAATCATTTGCTGTTGTCATGTACTTGCAGTGGCTATCTGCTGCCCCAACTTCAGATTTTCCAGAATTTCGTTATTTGCTTTACCTAGAGCTCTTTCTTCTCTCTTTCAACTTTAATTTTATATTCGACATGCTTCATAAATGTCCTATCCTGCAAACTCTGATAATATTCAATGACAAGGTATGTTCAGTTTAACTAAAGCTTTGATGTATGTGTGTGTGTGTGTGTTTTGTTTGAATATTTTATGTGAGTTGCCCCTTGTTGCCAGATGGATCCATCGTTTGATTCTTCACCTGCATATGGATGGGTGACAAAGCCTCAAAGTGTTCCCAAGTGTCTTGTATCACATTTGACCTTTATTAAATTTGCAGCATATCTAGGACATTTAAATGAGCTGGAATTTGTTAGATATGTTTTTCAAAATGGACTTGTTTTGAAGACAATGCTTATTGATGGATTCTACATGATGGATGAACCGGAGGAGTGGAAGGAAAAAATTTCTGATCTGCCAAGGGGATCGACGATGTGCCAAATTCAATTTCATTGA

Protein sequence

>MS.gene63214.t1

MMVEESSSIRLRPEDRMNSLPISILHHILSFLPTKTCVRTSLVCRIWRNLWKNLQTFNFCDNFHYMFHDHENIEQFLRFTVFVNDVLSLRRSRDTRKFHLSCAHSPSDPFFAHSIETWIDTIVGPHLEEFHLTIHCLEGVAFNLPQPLLSCSNLVSISLSGYILFQLQDSSGIHLPSLKVLQLLDMYLLDLNPVNIFLSGCHILEDLEMTFTSEPLAILRVPTSLKRLKIIVDTKVGACLEIDTPDLKYLSLTNVTISHAATIGNLHIVEEAFLDVLPTPESESVEPLLNLLRALSGIKHLELFSSTTKWLSAAPTSDFPEFRYLLYLELFLLSFNFNFIFDMLHKCPILQTLIIFNDKMDPSFDSSPAYGWVTKPQSVPKCLVSHLTFIKFAAYLGHLNELEFVRYVFQNGLVLKTMLIDGFYMMDEPEEWKEKISDLPRGSTMCQIQFH