AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32638


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32638.t1 MTR_3g107100 95.593 295 13 0 1 295 1 295 0.0 568
MS.gene32638.t1 MTR_3g107160 56.522 299 122 5 1 295 1 295 1.71e-103 307
MS.gene32638.t1 MTR_3g107120 54.754 305 120 4 5 295 3 303 4.07e-98 294
MS.gene32638.t1 MTR_2g007400 46.488 299 141 8 11 295 12 305 5.92e-73 230
MS.gene32638.t1 MTR_1g053025 45.574 305 139 10 11 295 2 299 1.43e-65 210
MS.gene32638.t1 MTR_2g007450 43.887 319 140 10 11 295 16 329 4.18e-64 207
MS.gene32638.t1 MTR_5g083890 42.857 308 147 9 10 295 5 305 3.10e-63 207
MS.gene32638.t1 MTR_2g007500 43.289 298 137 7 11 295 14 292 6.58e-63 202
MS.gene32638.t1 MTR_1g107385 43.182 308 143 11 10 295 31 328 6.33e-61 199
MS.gene32638.t1 MTR_4g098590 43.243 296 150 8 13 295 1 291 5.20e-60 196
MS.gene32638.t1 MTR_3g099830 41.638 293 134 7 11 295 12 275 1.58e-59 194
MS.gene32638.t1 MTR_2g007360 42.662 293 126 10 11 295 12 270 1.82e-57 189
MS.gene32638.t1 MTR_7g075820 40.065 307 156 7 10 295 5 304 2.94e-57 189
MS.gene32638.t1 MTR_2g008320 40.066 302 148 6 11 295 52 337 5.89e-57 189
MS.gene32638.t1 MTR_2g005990 40.878 296 156 7 11 293 6 295 3.70e-55 183
MS.gene32638.t1 MTR_2g008310 41.077 297 148 6 11 295 2 283 1.12e-54 182
MS.gene32638.t1 MTR_3g026920 38.245 319 142 8 11 293 19 318 1.32e-54 182
MS.gene32638.t1 MTR_1g041245 39.482 309 156 12 1 295 1 292 1.95e-50 171
MS.gene32638.t1 MTR_3g107140 51.955 179 71 4 41 207 22 197 3.14e-48 160
MS.gene32638.t1 MTR_7g083740 38.225 293 132 8 11 293 17 270 1.64e-45 157
MS.gene32638.t1 MTR_7g007340 36.644 292 144 7 7 295 9 262 1.38e-44 155
MS.gene32638.t1 MTR_5g073420 38.225 293 150 11 11 291 11 284 1.15e-43 153
MS.gene32638.t1 MTR_7g007370 36.735 294 130 10 5 295 11 251 1.60e-38 139
MS.gene32638.t1 MTR_7g032380 36.700 297 133 14 11 295 11 264 8.77e-38 137
MS.gene32638.t1 MTR_7g026500 36.000 300 161 11 11 291 14 301 1.93e-37 137
MS.gene32638.t1 MTR_5g058000 35.836 293 165 9 11 295 8 285 3.77e-36 133
MS.gene32638.t1 MTR_3g108150 35.593 295 163 9 9 291 11 290 1.10e-35 132
MS.gene32638.t1 MTR_7g098510 34.237 295 171 8 11 295 18 299 1.77e-35 132
MS.gene32638.t1 MTR_7g115270 34.304 309 171 10 10 295 11 310 2.46e-35 131
MS.gene32638.t1 MTR_8g085430 42.273 220 109 9 1 208 1 214 3.66e-35 129
MS.gene32638.t1 MTR_7g056433 34.211 304 179 10 3 295 4 297 5.28e-35 130
MS.gene32638.t1 MTR_3g036250 36.486 296 154 9 11 295 5 277 1.11e-34 129
MS.gene32638.t1 MTR_1g085120 34.983 303 174 10 7 295 88 381 1.66e-34 130
MS.gene32638.t1 MTR_1g085120 34.983 303 174 10 7 295 175 468 2.04e-34 130
MS.gene32638.t1 MTR_7g007080 31.987 297 182 8 9 295 2 288 2.80e-34 128
MS.gene32638.t1 MTR_1g085120 34.983 303 174 10 7 295 163 456 3.77e-34 130
MS.gene32638.t1 MTR_7g056287 33.898 295 167 10 10 293 2 279 4.25e-34 127
MS.gene32638.t1 MTR_7g075800 32.808 317 172 13 10 293 8 316 5.24e-34 131
MS.gene32638.t1 MTR_6g011460 35.395 291 166 8 11 291 46 324 6.67e-34 128
MS.gene32638.t1 MTR_2g007550 32.000 300 125 8 11 295 14 249 1.45e-33 125
MS.gene32638.t1 MTR_7g032370 33.684 285 151 11 23 295 2 260 5.25e-33 124
MS.gene32638.t1 MTR_5g058100 34.694 294 167 10 11 291 9 290 5.73e-33 125
MS.gene32638.t1 MTR_7g060470 33.010 309 163 9 10 289 2 295 5.96e-33 125
MS.gene32638.t1 MTR_7g033990 34.824 313 162 14 1 293 1 291 6.54e-33 125
MS.gene32638.t1 MTR_7g056277 33.788 293 166 10 10 291 258 533 9.83e-33 127
MS.gene32638.t1 MTR_3g040700 34.000 300 156 9 11 295 43 315 1.05e-32 125
MS.gene32638.t1 MTR_4g039440 35.570 298 159 10 11 291 34 315 1.27e-32 124
MS.gene32638.t1 MTR_7g098570 35.274 292 164 11 11 291 20 297 5.91e-32 124
MS.gene32638.t1 MTR_1089s0010 33.667 300 166 11 4 289 1 281 3.36e-31 120
MS.gene32638.t1 MTR_0492s0020 33.784 296 164 8 10 295 85 358 4.80e-31 120
MS.gene32638.t1 MTR_0009s0080 33.333 303 168 11 13 295 20 308 5.57e-31 120
MS.gene32638.t1 MTR_0543s0010 33.784 296 164 8 10 295 85 358 8.21e-31 120
MS.gene32638.t1 MTR_1g108820 32.899 307 168 12 11 295 8 298 8.39e-31 118
MS.gene32638.t1 MTR_7g055943 34.915 295 173 7 7 291 36 321 1.88e-30 119
MS.gene32638.t1 MTR_1g108820 32.343 303 175 11 11 295 8 298 1.96e-30 118
MS.gene32638.t1 MTR_1g066830 32.550 298 168 10 11 289 8 291 3.34e-30 117
MS.gene32638.t1 MTR_5g073370 32.302 291 184 7 11 295 5 288 4.05e-30 117
MS.gene32638.t1 MTR_6g045333 31.475 305 177 10 11 295 61 353 7.56e-30 117
MS.gene32638.t1 MTR_3g023630 33.788 293 164 11 9 289 6 280 8.72e-30 116
MS.gene32638.t1 MTR_7g098480 34.932 292 163 10 11 291 18 293 9.65e-30 117
MS.gene32638.t1 MTR_3g108560 35.000 300 164 12 8 295 17 297 1.22e-29 114
MS.gene32638.t1 MTR_7g056430 33.993 303 143 12 10 295 8 270 2.56e-29 117
MS.gene32638.t1 MTR_7g056420 33.993 303 143 12 10 295 8 270 3.46e-29 117
MS.gene32638.t1 MTR_7g088260 32.333 300 171 11 10 295 90 371 6.22e-29 115
MS.gene32638.t1 MTR_7g034090 46.053 152 66 3 10 153 3 146 6.64e-29 114
MS.gene32638.t1 MTR_3g108560 35.000 300 164 12 8 295 17 297 8.87e-29 114
MS.gene32638.t1 MTR_3g450920 45.122 164 74 5 63 223 65 215 1.86e-28 109
MS.gene32638.t1 MTR_6g022360 34.932 292 167 7 6 291 38 312 4.66e-28 112
MS.gene32638.t1 MTR_5g007410 31.438 299 180 10 13 295 28 317 5.02e-28 112
MS.gene32638.t1 MTR_7g033915 33.758 314 146 17 1 293 1 273 6.82e-28 110
MS.gene32638.t1 MTR_3g082890 31.511 311 173 10 11 295 97 393 1.03e-27 112
MS.gene32638.t1 MTR_3g082890 31.511 311 173 10 11 295 17 313 1.06e-27 111
MS.gene32638.t1 MTR_5g008950 32.203 295 166 11 13 295 1 273 1.65e-27 110
MS.gene32638.t1 MTR_7g034115 35.786 299 160 12 11 295 11 291 1.83e-27 110
MS.gene32638.t1 MTR_3g105060 29.371 286 179 9 11 289 14 283 2.20e-27 109
MS.gene32638.t1 MTR_7g114710 31.633 294 157 11 11 295 13 271 2.55e-27 109
MS.gene32638.t1 MTR_5g008920 32.781 302 175 11 3 293 4 288 2.69e-27 109
MS.gene32638.t1 MTR_5g045170 34.114 299 167 10 13 295 16 300 7.36e-27 108
MS.gene32638.t1 MTR_7g056447 38.384 198 109 6 7 199 5 194 1.37e-26 106
MS.gene32638.t1 MTR_7g034110 32.673 303 127 11 11 295 11 254 1.81e-26 107
MS.gene32638.t1 MTR_6g022500 31.475 305 180 11 6 295 96 386 2.15e-26 108
MS.gene32638.t1 MTR_5g073340 30.822 292 166 8 11 295 8 270 7.60e-26 104
MS.gene32638.t1 MTR_4g134150 36.410 195 105 7 10 199 13 193 1.50e-25 102
MS.gene32638.t1 MTR_5g061680 32.765 293 148 11 11 291 11 266 1.74e-25 103
MS.gene32638.t1 MTR_2g007530 39.655 174 75 6 11 154 19 192 2.65e-25 103
MS.gene32638.t1 MTR_5g084070 32.537 335 161 14 11 293 13 334 4.08e-25 104
MS.gene32638.t1 MTR_6g040270 32.646 291 177 10 13 295 10 289 7.44e-25 102
MS.gene32638.t1 MTR_3g109982 32.770 296 164 12 11 295 13 284 2.55e-24 103
MS.gene32638.t1 MTR_3g109982 35.465 172 95 5 132 295 220 383 2.89e-11 64.3
MS.gene32638.t1 MTR_3g110010 32.770 296 164 12 11 295 13 284 2.55e-24 103
MS.gene32638.t1 MTR_3g110010 35.465 172 95 5 132 295 220 383 3.55e-11 63.9
MS.gene32638.t1 MTR_3g071850 30.033 303 180 10 11 293 24 314 2.85e-24 103
MS.gene32638.t1 MTR_3g087260 32.069 290 157 11 11 295 12 266 1.30e-23 100
MS.gene32638.t1 MTR_3g087260 34.555 191 104 9 110 291 181 359 4.45e-11 63.5
MS.gene32638.t1 MTR_8g467800 34.234 222 134 6 6 221 15 230 1.63e-23 98.6
MS.gene32638.t1 MTR_1g108800 32.394 284 139 9 11 286 8 246 2.27e-23 98.2
MS.gene32638.t1 MTR_3g106960 51.351 111 49 3 188 295 1 109 6.13e-23 95.1
MS.gene32638.t1 MTR_8g467800 34.234 222 134 6 6 221 15 230 8.07e-23 98.2
MS.gene32638.t1 MTR_5g045510 30.627 271 160 7 11 268 12 267 1.77e-22 96.3
MS.gene32638.t1 MTR_3g467400 30.952 252 155 6 11 248 3 249 1.95e-22 95.9
MS.gene32638.t1 MTR_3g095600 32.780 241 122 8 11 243 4 212 5.93e-22 93.6
MS.gene32638.t1 MTR_4g032730 33.168 202 121 5 5 193 9 209 1.79e-21 94.4
MS.gene32638.t1 MTR_6g044572 31.962 316 152 11 11 291 2 289 1.98e-21 93.6
MS.gene32638.t1 MTR_7g033945 37.433 187 88 10 1 171 1 174 3.28e-21 89.0
MS.gene32638.t1 MTR_6g044560 31.962 316 152 11 11 291 178 465 4.55e-21 93.6
MS.gene32638.t1 MTR_5g039470 29.655 290 163 12 27 293 1 272 4.91e-21 91.7
MS.gene32638.t1 MTR_5g039450 28.239 301 169 9 11 293 6 277 1.35e-20 90.9
MS.gene32638.t1 MTR_5g031970 30.464 302 138 12 11 293 16 264 4.24e-20 89.4
MS.gene32638.t1 MTR_2g036470 27.907 301 190 10 11 295 14 303 6.83e-20 89.4
MS.gene32638.t1 MTR_6g029350 45.690 116 53 4 181 295 1 107 8.96e-20 86.7
MS.gene32638.t1 MTR_7g056280 36.723 177 107 3 8 180 3 178 1.91e-19 88.6
MS.gene32638.t1 MTR_7g056280 40.870 115 65 2 182 295 367 479 1.89e-15 76.6
MS.gene32638.t1 MTR_5g092960 33.054 239 143 7 3 229 11 244 2.33e-19 87.8
MS.gene32638.t1 MTR_8g445780 30.970 268 154 12 9 260 11 263 3.06e-19 87.4
MS.gene32638.t1 MTR_5g092960 33.054 239 143 7 3 229 11 244 3.44e-19 87.4
MS.gene32638.t1 MTR_7g021990 29.730 296 183 8 11 295 48 329 6.35e-19 86.7
MS.gene32638.t1 MTR_7g056020 30.097 309 166 11 3 295 8 282 6.57e-19 87.0
MS.gene32638.t1 MTR_4g093690 34.328 201 102 8 11 195 18 204 6.91e-19 84.7
MS.gene32638.t1 MTR_7g021950 29.730 296 183 8 11 295 48 329 1.12e-18 86.3
MS.gene32638.t1 MTR_8g468810 32.161 199 124 7 5 193 19 216 1.58e-18 84.7
MS.gene32638.t1 MTR_8g468810 32.663 199 123 7 5 193 19 216 1.68e-18 84.3
MS.gene32638.t1 MTR_8g468810 32.663 199 123 7 5 193 19 216 2.40e-18 84.7
MS.gene32638.t1 MTR_8g468810 32.663 199 123 7 5 193 19 216 2.94e-18 84.0
MS.gene32638.t1 MTR_8g468810 32.161 199 124 7 5 193 19 216 4.06e-18 84.3
MS.gene32638.t1 MTR_7g034120 33.816 207 116 8 101 295 25 222 5.89e-18 82.8
MS.gene32638.t1 MTR_8g058965 33.184 223 115 9 1 195 1 217 7.31e-18 83.6
MS.gene32638.t1 MTR_7g023310 31.746 189 121 5 7 192 22 205 8.09e-18 83.6
MS.gene32638.t1 MTR_8g014160 33.168 202 116 6 10 195 40 238 1.11e-17 83.2
MS.gene32638.t1 MTR_8g062010 31.915 188 115 6 11 190 9 191 1.30e-17 82.8
MS.gene32638.t1 MTR_7g033470 39.130 138 45 3 11 147 14 113 1.60e-17 77.8
MS.gene32638.t1 MTR_1g492880 42.718 103 53 3 8 105 3 104 1.84e-17 76.6
MS.gene32638.t1 MTR_8g058970 31.674 221 111 9 6 193 14 227 3.71e-17 81.6
MS.gene32638.t1 MTR_4g056020 33.000 200 117 6 7 196 5 197 4.53e-17 81.3
MS.gene32638.t1 MTR_1g492880 48.864 88 41 2 8 92 3 89 5.91e-17 75.1
MS.gene32638.t1 MTR_3g114200 36.620 142 79 5 11 148 19 153 7.28e-17 76.6
MS.gene32638.t1 MTR_8g062270 29.528 254 155 8 8 245 13 258 7.85e-17 80.5
MS.gene32638.t1 MTR_8g468840 31.633 196 120 5 11 193 14 208 1.10e-16 80.1
MS.gene32638.t1 MTR_4g080787 25.613 367 178 13 10 293 18 372 1.50e-16 80.1
MS.gene32638.t1 MTR_5g076150 36.264 182 81 8 136 289 26 200 1.51e-16 77.4
MS.gene32638.t1 MTR_4g056030 36.139 202 102 10 7 193 5 194 1.54e-16 79.7
MS.gene32638.t1 MTR_5g082930 47.126 87 39 1 13 92 17 103 1.63e-16 77.0
MS.gene32638.t1 MTR_8g062310 31.156 199 119 9 1 193 15 201 1.73e-16 79.7
MS.gene32638.t1 MTR_8g014260 31.707 205 126 6 8 198 13 217 1.82e-16 79.7
MS.gene32638.t1 MTR_2g007090 37.500 152 76 2 144 295 73 205 2.24e-16 78.2
MS.gene32638.t1 MTR_7g022105 27.682 289 193 8 11 291 49 329 4.31e-16 78.2
MS.gene32638.t1 MTR_7g081290 48.780 82 39 1 8 86 15 96 6.05e-16 76.3
MS.gene32638.t1 MTR_5g080710 37.186 199 106 8 11 200 33 221 1.09e-15 77.4
MS.gene32638.t1 MTR_2g020170 40.496 121 54 6 9 120 20 131 2.24e-15 72.0
MS.gene32638.t1 MTR_5g065100 33.755 237 132 11 16 245 13 231 2.98e-15 75.9
MS.gene32638.t1 MTR_6g022520 37.555 229 119 10 77 291 1 219 3.26e-15 75.1
MS.gene32638.t1 MTR_7g033940 42.982 114 51 5 13 120 96 201 3.53e-15 73.6
MS.gene32638.t1 MTR_5g039490 28.571 280 166 10 11 271 20 284 9.06e-15 74.3
MS.gene32638.t1 MTR_8g062080 33.495 206 119 10 4 199 16 213 1.32e-14 73.9
MS.gene32638.t1 MTR_5g058350 32.787 183 94 4 11 192 8 162 1.33e-14 70.9
MS.gene32638.t1 MTR_2g007460 36.207 116 52 3 11 121 12 110 1.48e-14 68.9
MS.gene32638.t1 MTR_2g099980 33.108 148 85 6 8 148 35 175 1.90e-14 73.6
MS.gene32638.t1 MTR_2g082800 33.721 172 91 7 7 168 23 181 6.70e-14 71.6
MS.gene32638.t1 MTR_1g011430 29.744 195 117 6 7 192 3 186 9.97e-14 71.2
MS.gene32638.t1 MTR_8g070950 29.612 206 123 9 8 203 12 205 1.19e-13 71.2
MS.gene32638.t1 MTR_3g113782 54.000 50 23 0 8 57 14 63 1.79e-13 65.5
MS.gene32638.t1 MTR_8g468760 28.125 320 187 11 6 289 4 316 1.84e-13 70.5
MS.gene32638.t1 MTR_3g048290 30.769 234 124 8 7 222 17 230 2.10e-13 70.5
MS.gene32638.t1 MTR_8g014290 31.373 153 88 5 9 145 8 159 2.67e-13 67.0
MS.gene32638.t1 MTR_1g077420 29.480 173 106 5 11 177 4 166 2.87e-13 68.9
MS.gene32638.t1 MTR_2g007100 72.973 37 10 0 11 47 2 38 2.88e-13 64.3
MS.gene32638.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 2.95e-13 70.1
MS.gene32638.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 3.22e-13 70.1
MS.gene32638.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 3.48e-13 69.7
MS.gene32638.t1 MTR_8g062300 27.596 366 182 16 5 291 20 381 4.16e-13 69.7
MS.gene32638.t1 MTR_4g080773 30.769 208 114 6 10 195 18 217 4.70e-13 69.3
MS.gene32638.t1 MTR_4g080773 30.769 208 114 6 10 195 18 217 5.29e-13 69.3
MS.gene32638.t1 MTR_4g024720 30.435 184 102 7 5 162 11 194 5.32e-13 67.0
MS.gene32638.t1 MTR_5g061410 30.068 296 145 14 16 291 10 263 6.65e-13 67.8
MS.gene32638.t1 MTR_1g095750 64.444 45 16 0 11 55 46 90 6.90e-13 65.5
MS.gene32638.t1 MTR_8g469020 30.038 263 136 11 11 248 7 246 7.41e-13 68.9
MS.gene32638.t1 MTR_7g098590 58.333 48 20 0 11 58 18 65 7.81e-13 65.1
MS.gene32638.t1 MTR_5g060570 32.544 169 98 9 11 173 17 175 8.68e-13 67.4
MS.gene32638.t1 MTR_5g063950 28.621 290 154 13 16 291 13 263 1.28e-12 67.8
MS.gene32638.t1 MTR_1g090900 32.065 184 111 8 1 178 1 176 1.37e-12 65.9
MS.gene32638.t1 MTR_5g021550 30.323 155 91 7 4 145 12 162 1.90e-12 64.7
MS.gene32638.t1 MTR_5g039970 29.412 221 139 6 8 221 16 226 2.00e-12 67.0
MS.gene32638.t1 MTR_8g468910 26.872 227 140 7 6 211 43 264 2.38e-12 67.4
MS.gene32638.t1 MTR_1g038710 28.531 354 168 18 11 291 19 360 2.55e-12 67.4
MS.gene32638.t1 MTR_4g047950 32.353 170 106 4 9 173 11 176 2.70e-12 67.0
MS.gene32638.t1 MTR_2g083840 30.653 199 120 7 9 193 19 213 2.72e-12 67.0
MS.gene32638.t1 MTR_8g467790 27.632 304 173 16 11 292 148 426 2.77e-12 67.4
MS.gene32638.t1 MTR_2g082880 31.579 209 125 7 8 208 7 205 3.18e-12 67.0
MS.gene32638.t1 MTR_3g023270 31.844 179 104 6 7 178 6 173 3.52e-12 66.6
MS.gene32638.t1 MTR_3g099900 33.146 178 99 7 6 173 13 180 3.78e-12 66.6
MS.gene32638.t1 MTR_5g005690 31.250 160 96 5 6 161 14 163 3.80e-12 66.6
MS.gene32638.t1 MTR_1g090883 26.648 349 183 13 7 291 15 354 4.05e-12 66.2
MS.gene32638.t1 MTR_4g024770 50.980 51 25 0 5 55 18 68 5.86e-12 60.8
MS.gene32638.t1 MTR_4g050250 26.816 358 184 14 11 291 21 377 7.84e-12 65.9
MS.gene32638.t1 MTR_6g022390 39.683 126 60 6 11 123 5 127 8.42e-12 62.4
MS.gene32638.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 1.09e-11 65.5
MS.gene32638.t1 MTR_8g077460 25.658 304 184 10 5 291 4 282 1.13e-11 65.1
MS.gene32638.t1 MTR_1g013630 25.733 307 196 12 9 295 37 331 1.16e-11 65.1
MS.gene32638.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 1.21e-11 65.1
MS.gene32638.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 1.25e-11 65.1
MS.gene32638.t1 MTR_2g082850 30.233 215 110 9 11 190 22 231 1.36e-11 64.7
MS.gene32638.t1 MTR_2g082860 55.102 49 22 0 11 59 27 75 1.46e-11 61.2
MS.gene32638.t1 MTR_5g087940 30.857 175 98 7 6 173 21 179 1.73e-11 64.7
MS.gene32638.t1 MTR_0571s0010 43.038 79 42 1 11 86 32 110 1.88e-11 60.5
MS.gene32638.t1 MTR_2g047872 26.214 206 122 7 4 193 16 207 2.53e-11 64.3
MS.gene32638.t1 MTR_3g014550 29.778 225 126 10 7 212 7 218 3.58e-11 63.5
MS.gene32638.t1 MTR_7g094030 34.337 166 91 7 10 168 27 181 3.67e-11 63.9
MS.gene32638.t1 MTR_3g095640 30.675 163 99 6 2 154 9 167 5.38e-11 60.8
MS.gene32638.t1 MTR_6g092430 28.488 172 110 3 11 173 10 177 6.20e-11 62.8
MS.gene32638.t1 MTR_3g023470 30.636 173 99 5 6 168 10 171 7.23e-11 62.8
MS.gene32638.t1 MTR_5g073400 50.725 69 33 1 135 203 53 120 7.29e-11 59.7
MS.gene32638.t1 MTR_2g047858 29.469 207 116 9 9 198 113 306 8.38e-11 62.8
MS.gene32638.t1 MTR_1g014450 27.570 214 127 8 9 207 14 214 9.00e-11 62.4
MS.gene32638.t1 MTR_4g014260 30.345 145 92 4 4 147 19 155 9.55e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32638.t1 AT1G78750 34.197 193 119 2 11 196 18 209 1.24e-23 100
MS.gene32638.t1 AT1G78750 34.197 193 119 2 11 196 18 209 1.24e-23 100
MS.gene32638.t1 AT1G16930 34.715 193 101 5 11 192 15 193 2.85e-23 99.4
MS.gene32638.t1 AT1G16930 34.715 193 101 5 11 192 15 193 2.85e-23 99.4
MS.gene32638.t1 AT1G16930 34.715 193 101 5 11 192 15 193 2.85e-23 99.4
MS.gene32638.t1 AT3G58860 28.169 355 177 13 6 294 2 344 3.44e-23 99.0
MS.gene32638.t1 AT5G41840 39.109 202 98 7 11 192 14 210 6.01e-23 99.0
MS.gene32638.t1 AT1G69630 31.579 190 129 1 7 196 14 202 1.75e-22 97.1
MS.gene32638.t1 AT5G56370 29.630 324 181 10 11 295 2 317 6.50e-22 94.0
MS.gene32638.t1 AT5G53840 32.569 218 138 4 5 222 12 220 1.09e-21 94.7
MS.gene32638.t1 AT1G13780 31.222 221 126 6 11 216 10 219 1.47e-21 93.2
MS.gene32638.t1 AT5G56370 29.630 324 181 10 11 295 2 317 1.71e-21 94.0
MS.gene32638.t1 AT5G56370 29.630 324 181 10 11 295 2 317 1.71e-21 94.0
MS.gene32638.t1 AT1G13780 31.222 221 126 6 11 216 10 219 4.79e-21 92.8
MS.gene32638.t1 AT4G14096 35.533 197 108 6 11 197 8 195 5.52e-21 92.8
MS.gene32638.t1 AT4G14096 35.533 197 108 6 11 197 8 195 5.52e-21 92.8
MS.gene32638.t1 AT3G58940 27.405 343 174 11 11 289 2 333 1.24e-20 92.4
MS.gene32638.t1 AT3G58940 27.405 343 174 11 11 289 2 333 1.24e-20 92.4
MS.gene32638.t1 AT1G78760 32.804 189 123 3 5 192 10 195 3.50e-20 90.5
MS.gene32638.t1 AT5G22720 29.358 218 133 5 10 217 22 228 7.02e-20 89.7
MS.gene32638.t1 AT1G66310 29.474 190 122 3 7 192 15 196 9.04e-20 89.4
MS.gene32638.t1 AT3G59200 34.135 208 108 7 11 201 7 202 1.03e-19 88.6
MS.gene32638.t1 AT4G26340 29.091 330 178 11 11 293 2 322 2.52e-19 87.8
MS.gene32638.t1 AT3G59200 34.135 208 108 7 11 201 7 202 2.76e-19 88.2
MS.gene32638.t1 AT5G22670 31.443 194 128 3 1 194 1 189 3.50e-19 87.4
MS.gene32638.t1 AT3G58900 32.547 212 110 6 11 203 2 199 4.36e-19 85.9
MS.gene32638.t1 AT5G53635 30.189 212 138 4 13 220 2 207 6.13e-19 86.7
MS.gene32638.t1 AT2G26860 29.912 341 169 13 11 293 2 330 6.49e-19 86.7
MS.gene32638.t1 AT2G26860 29.912 341 169 13 11 293 2 330 6.49e-19 86.7
MS.gene32638.t1 AT3G58900 32.547 212 110 6 11 203 2 199 7.08e-19 85.5
MS.gene32638.t1 AT3G58900 32.547 212 110 6 11 203 2 199 7.08e-19 85.5
MS.gene32638.t1 AT3G59240 31.982 222 129 8 11 221 8 218 7.52e-19 86.7
MS.gene32638.t1 AT5G25850 31.980 197 99 5 11 193 20 195 7.79e-19 86.7
MS.gene32638.t1 AT5G22730 29.947 187 121 4 10 192 27 207 9.62e-19 85.9
MS.gene32638.t1 AT5G53640 29.730 185 119 5 10 192 21 196 1.16e-18 83.2
MS.gene32638.t1 AT4G00160 35.859 198 115 6 11 204 16 205 1.24e-18 85.9
MS.gene32638.t1 AT1G55660 33.871 186 118 4 11 192 53 237 1.30e-18 85.1
MS.gene32638.t1 AT1G55660 33.871 186 118 4 11 192 53 237 1.41e-18 85.9
MS.gene32638.t1 AT4G00315 33.511 188 116 5 11 192 2 186 1.77e-18 85.5
MS.gene32638.t1 AT5G22730 29.947 187 121 4 10 192 27 207 1.83e-18 85.5
MS.gene32638.t1 AT5G22730 29.947 187 121 4 10 192 27 207 1.83e-18 85.5
MS.gene32638.t1 AT4G14103 32.663 199 117 6 11 199 8 199 2.02e-18 85.5
MS.gene32638.t1 AT4G14103 32.663 199 117 6 11 199 8 199 2.08e-18 84.7
MS.gene32638.t1 AT4G14103 32.663 199 117 6 11 199 8 199 2.08e-18 84.7
MS.gene32638.t1 AT3G58900 32.547 212 110 6 11 203 2 199 2.16e-18 85.5
MS.gene32638.t1 AT5G27750 29.949 197 115 6 11 192 5 193 2.36e-18 85.1
MS.gene32638.t1 AT5G22610 27.108 332 183 11 10 291 17 339 2.50e-18 85.1
MS.gene32638.t1 AT5G27750 29.949 197 115 6 11 192 5 193 2.93e-18 84.3
MS.gene32638.t1 AT1G51370 31.351 185 116 5 9 192 17 191 3.45e-18 84.0
MS.gene32638.t1 AT3G59190 35.096 208 109 8 2 192 3 201 4.37e-18 84.0
MS.gene32638.t1 AT5G56420 27.190 331 189 9 11 295 6 330 5.73e-18 84.0
MS.gene32638.t1 AT5G56420 27.190 331 189 9 11 295 6 330 5.73e-18 84.0
MS.gene32638.t1 AT5G56420 27.190 331 189 9 11 295 6 330 5.73e-18 84.0
MS.gene32638.t1 AT4G00320 36.318 201 104 7 11 192 13 208 6.46e-18 84.0
MS.gene32638.t1 AT5G41830 37.374 198 106 6 11 192 13 208 7.12e-18 84.0
MS.gene32638.t1 AT3G03040 33.014 209 118 6 11 204 2 203 7.20e-18 84.0
MS.gene32638.t1 AT3G59190 35.096 208 109 8 2 192 3 201 8.11e-18 84.0
MS.gene32638.t1 AT4G22280 30.088 339 167 13 11 291 2 328 9.02e-18 82.4
MS.gene32638.t1 AT1G51370 31.351 185 116 5 9 192 17 191 9.10e-18 83.2
MS.gene32638.t1 AT1G51370 31.351 185 116 5 9 192 17 191 1.11e-17 83.2
MS.gene32638.t1 AT4G22280 30.088 339 167 13 11 291 2 328 1.17e-17 82.8
MS.gene32638.t1 AT2G42730 30.729 192 122 5 11 192 5 195 1.94e-17 82.4
MS.gene32638.t1 AT4G13965 34.804 204 116 7 9 206 8 200 2.12e-17 82.4
MS.gene32638.t1 AT4G13985 26.923 208 139 2 1 198 9 213 2.75e-17 82.0
MS.gene32638.t1 AT5G22660 28.194 227 142 7 10 229 12 224 5.11e-17 80.1
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 6.29e-17 80.5
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 6.29e-17 80.5
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 16 358 6.31e-17 80.9
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 8.29e-17 80.5
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 8.29e-17 80.5
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 8.29e-17 80.5
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 8.29e-17 80.5
MS.gene32638.t1 AT3G58930 31.602 231 125 8 11 221 2 219 9.41e-17 80.5
MS.gene32638.t1 AT3G58930 31.602 231 125 8 11 221 2 219 9.41e-17 80.5
MS.gene32638.t1 AT3G58930 31.602 231 125 8 11 221 2 219 9.41e-17 80.5
MS.gene32638.t1 AT3G49030 35.122 205 110 7 3 196 13 205 1.28e-16 80.1
MS.gene32638.t1 AT5G38390 34.545 220 127 8 11 227 2 207 1.57e-16 79.7
MS.gene32638.t1 AT3G49030 35.122 205 110 7 3 196 13 205 1.61e-16 79.7
MS.gene32638.t1 AT1G06630 27.794 349 183 13 6 291 7 349 1.69e-16 79.7
MS.gene32638.t1 AT5G22660 28.194 227 142 7 10 229 12 224 1.74e-16 79.7
MS.gene32638.t1 AT3G49150 28.992 238 142 8 4 231 9 229 2.53e-16 79.3
MS.gene32638.t1 AT5G22700 24.595 309 200 8 11 293 43 344 2.57e-16 79.0
MS.gene32638.t1 AT1G66290 28.947 190 126 3 2 190 20 201 2.91e-16 79.0
MS.gene32638.t1 AT2G26030 28.148 270 172 12 11 272 4 259 3.18e-16 79.0
MS.gene32638.t1 AT2G26030 28.148 270 172 12 11 272 4 259 3.85e-16 78.6
MS.gene32638.t1 AT2G26030 28.148 270 172 12 11 272 4 259 3.85e-16 78.6
MS.gene32638.t1 AT3G60040 33.971 209 115 7 11 199 230 435 4.98e-16 78.6
MS.gene32638.t1 AT3G60040 33.971 209 115 7 11 199 232 437 5.37e-16 78.6
MS.gene32638.t1 AT3G60040 33.971 209 115 7 11 199 13 218 5.54e-16 78.6
MS.gene32638.t1 AT1G06630 34.135 208 116 8 6 198 7 208 6.36e-16 77.0
MS.gene32638.t1 AT3G60040 33.971 209 115 7 11 199 232 437 7.24e-16 78.2
MS.gene32638.t1 AT3G60040 33.971 209 115 7 11 199 233 438 7.44e-16 78.2
MS.gene32638.t1 AT5G38392 32.323 198 113 5 11 192 2 194 7.76e-16 75.1
MS.gene32638.t1 AT3G58920 30.357 224 135 8 11 220 2 218 7.89e-16 77.8
MS.gene32638.t1 AT5G22700 27.619 210 142 6 11 217 6 208 7.90e-16 77.8
MS.gene32638.t1 AT5G22700 27.619 210 142 6 11 217 6 208 7.90e-16 77.8
MS.gene32638.t1 AT5G22700 27.619 210 142 6 11 217 6 208 7.90e-16 77.8
MS.gene32638.t1 AT5G22700 27.619 210 142 6 11 217 6 208 7.90e-16 77.8
MS.gene32638.t1 AT5G44940 29.592 294 169 15 11 286 5 278 9.36e-16 77.0
MS.gene32638.t1 AT5G22700 27.619 210 142 6 11 217 43 245 1.28e-15 77.0
MS.gene32638.t1 AT5G44950 30.986 213 138 5 11 221 4 209 1.65e-15 76.6
MS.gene32638.t1 AT4G10400 32.000 200 110 6 11 196 2 189 1.76e-15 76.6
MS.gene32638.t1 AT4G10400 32.000 200 110 6 11 196 2 189 1.76e-15 76.6
MS.gene32638.t1 AT4G10400 32.000 200 110 6 11 196 2 189 1.76e-15 76.6
MS.gene32638.t1 AT3G03030 31.156 199 114 6 11 193 2 193 2.16e-15 75.9
MS.gene32638.t1 AT5G56380 31.217 189 121 3 11 192 2 188 2.33e-15 76.3
MS.gene32638.t1 AT5G56380 31.217 189 121 3 11 192 2 188 2.33e-15 76.3
MS.gene32638.t1 AT3G42770 31.500 200 116 6 16 198 4 199 2.73e-15 76.3
MS.gene32638.t1 AT3G03030 31.156 199 114 6 11 193 2 193 3.34e-15 75.9
MS.gene32638.t1 AT4G15060 30.144 209 140 4 2 206 17 223 4.98e-15 75.1
MS.gene32638.t1 AT3G58980 29.130 230 145 8 11 232 2 221 6.28e-15 75.5
MS.gene32638.t1 AT2G04230 31.441 229 140 9 5 225 7 226 6.36e-15 75.1
MS.gene32638.t1 AT5G22610 25.138 362 182 13 10 291 17 369 6.77e-15 75.1
MS.gene32638.t1 AT1G80470 29.947 187 124 4 9 192 13 195 8.79e-15 74.7
MS.gene32638.t1 AT3G44810 30.928 194 122 3 16 199 12 203 9.50e-15 74.7
MS.gene32638.t1 AT4G09920 32.143 196 104 6 11 192 2 182 1.57e-14 72.8
MS.gene32638.t1 AT4G09920 32.143 196 104 6 11 192 2 182 1.57e-14 72.8
MS.gene32638.t1 AT4G09920 32.143 196 104 6 11 192 2 182 1.57e-14 72.8
MS.gene32638.t1 AT4G09920 32.143 196 104 6 11 192 2 182 1.61e-14 73.2
MS.gene32638.t1 AT4G09920 32.143 196 104 6 11 192 2 182 1.61e-14 73.2
MS.gene32638.t1 AT2G42720 33.158 190 118 7 11 192 2 190 1.67e-14 73.9
MS.gene32638.t1 AT5G41630 33.649 211 115 7 1 192 1 205 1.82e-14 73.6
MS.gene32638.t1 AT3G44080 26.537 309 174 8 16 295 12 296 2.89e-14 72.8
MS.gene32638.t1 AT3G59210 30.045 223 139 5 6 217 2 218 4.58e-14 72.4
MS.gene32638.t1 AT3G59210 30.045 223 139 5 6 217 2 218 4.58e-14 72.4
MS.gene32638.t1 AT3G59210 30.045 223 139 5 6 217 2 218 4.58e-14 72.4
MS.gene32638.t1 AT3G59210 30.045 223 139 5 6 217 2 218 4.58e-14 72.4
MS.gene32638.t1 AT3G59210 30.045 223 139 5 6 217 2 218 4.58e-14 72.4
MS.gene32638.t1 AT3G51530 30.270 185 118 3 10 192 29 204 5.10e-14 72.4
MS.gene32638.t1 AT5G38396 32.000 200 111 6 11 192 2 194 6.88e-14 72.0
MS.gene32638.t1 AT1G66300 25.311 241 157 5 11 248 29 249 7.40e-14 72.0
MS.gene32638.t1 AT3G26922 31.937 191 121 5 9 196 12 196 8.90e-14 70.9
MS.gene32638.t1 AT3G26922 31.937 191 121 5 9 196 12 196 8.90e-14 70.9
MS.gene32638.t1 AT3G49040 31.282 195 120 6 8 195 14 201 8.93e-14 70.9
MS.gene32638.t1 AT4G15060 30.137 219 146 5 9 223 170 385 1.14e-13 71.6
MS.gene32638.t1 AT3G59230 25.676 370 178 14 11 291 12 373 1.22e-13 71.2
MS.gene32638.t1 AT5G18770 27.670 206 107 4 10 193 23 208 1.24e-13 70.9
MS.gene32638.t1 AT5G25860 28.390 236 134 7 11 221 12 237 1.34e-13 71.2
MS.gene32638.t1 AT5G44490 27.807 187 128 4 10 192 16 199 1.65e-13 70.9
MS.gene32638.t1 AT1G48400 32.984 191 114 6 11 192 10 195 1.69e-13 70.9
MS.gene32638.t1 AT5G44490 27.807 187 128 4 10 192 16 199 2.04e-13 70.5
MS.gene32638.t1 AT1G48400 32.984 191 114 6 11 192 10 195 2.14e-13 70.5
MS.gene32638.t1 AT5G18770 27.670 206 107 4 10 193 23 208 2.72e-13 70.1
MS.gene32638.t1 AT3G59150 27.660 329 166 12 11 270 13 338 3.72e-13 69.7
MS.gene32638.t1 AT3G58960 30.093 216 138 7 11 221 2 209 4.86e-13 69.3
MS.gene32638.t1 AT3G44090 27.545 334 169 15 16 294 29 344 1.17e-12 68.2
MS.gene32638.t1 AT5G56690 30.052 193 113 7 13 192 4 187 1.67e-12 67.8
MS.gene32638.t1 AT1G66320 26.455 189 130 4 8 193 26 208 2.72e-12 67.0
MS.gene32638.t1 AT3G58880 30.000 200 120 4 11 197 3 195 2.76e-12 67.0
MS.gene32638.t1 AT3G49480 30.556 216 118 9 10 205 11 214 2.76e-12 67.0
MS.gene32638.t1 AT1G60410 34.392 189 111 6 11 192 10 192 2.82e-12 67.0
MS.gene32638.t1 AT1G66300 22.295 305 202 8 11 291 29 322 4.95e-12 66.2
MS.gene32638.t1 AT1G16940 27.895 190 110 8 13 192 13 185 5.82e-12 66.2
MS.gene32638.t1 AT3G52680 33.000 200 117 7 11 204 21 209 6.35e-12 65.9
MS.gene32638.t1 AT3G52680 33.000 200 117 7 11 204 21 209 6.52e-12 66.2
MS.gene32638.t1 AT5G44960 27.811 338 171 16 11 291 5 326 7.06e-12 65.9
MS.gene32638.t1 AT1G52650 29.952 207 121 7 11 203 2 198 7.80e-12 65.9
MS.gene32638.t1 AT5G44980 31.282 195 115 9 9 193 2 187 8.57e-12 65.1
MS.gene32638.t1 AT5G44980 31.282 195 115 9 9 193 2 187 8.57e-12 65.1
MS.gene32638.t1 AT4G26350 31.606 193 110 8 11 193 2 182 1.35e-11 65.1
MS.gene32638.t1 AT1G32375 24.850 334 193 12 11 293 2 328 1.51e-11 64.7
MS.gene32638.t1 AT1G32375 24.850 334 193 12 11 293 2 328 1.51e-11 64.7
MS.gene32638.t1 AT5G44980 31.282 195 115 9 9 193 2 187 1.55e-11 64.7
MS.gene32638.t1 AT5G44980 31.282 195 115 9 9 193 2 187 1.55e-11 64.7
MS.gene32638.t1 AT4G27050 27.143 210 117 5 9 192 2 201 1.85e-11 64.7
MS.gene32638.t1 AT4G27050 27.143 210 117 5 9 192 2 201 1.85e-11 64.7
MS.gene32638.t1 AT4G27050 27.143 210 117 5 9 192 2 201 1.85e-11 64.7
MS.gene32638.t1 AT4G27050 27.143 210 117 5 9 192 2 201 1.85e-11 64.7
MS.gene32638.t1 AT4G27050 27.143 210 117 5 9 192 2 201 1.85e-11 64.7
MS.gene32638.t1 AT3G59000 29.200 250 125 8 11 218 2 241 2.88e-11 63.5
MS.gene32638.t1 AT5G56440 29.787 188 119 4 11 192 2 182 3.51e-11 63.9
MS.gene32638.t1 AT3G59000 32.044 181 99 6 11 174 2 175 3.95e-11 63.9
MS.gene32638.t1 AT3G56780 29.630 189 114 5 13 194 9 185 4.71e-11 63.5
MS.gene32638.t1 AT3G56780 29.630 189 114 6 13 194 9 185 5.12e-11 63.2
MS.gene32638.t1 AT5G56820 28.191 188 116 5 11 192 15 189 5.44e-11 63.2
MS.gene32638.t1 AT3G49020 31.959 194 118 7 8 196 19 203 5.71e-11 63.2
MS.gene32638.t1 AT3G56780 29.947 187 112 6 13 192 9 183 5.85e-11 63.2
MS.gene32638.t1 AT3G44060 30.804 224 129 9 16 229 4 211 6.05e-11 63.2
MS.gene32638.t1 AT1G60400 29.167 192 116 5 11 192 14 195 6.08e-11 63.2
MS.gene32638.t1 AT1G26890 31.481 162 100 6 9 168 36 188 8.55e-11 62.4
MS.gene32638.t1 AT1G26890 31.481 162 100 6 9 168 36 188 8.55e-11 62.4

Find 62 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATTTCATGTTGCTTT+TGG 0.258290 3.1:-84882783 MS.gene32638:CDS
ATCCTTCATCTCAGCGAATC+TGG 0.285405 3.1:-84882818 MS.gene32638:CDS
AGAATGCTAATAGGCAATTT+AGG 0.307428 3.1:+84882923 None:intergenic
CCTATCATCATCGTCGTTAT+CGG 0.319001 3.1:+84883297 None:intergenic
GCTTGTAATTCTTCAAGAAT+TGG 0.321909 3.1:+84882752 None:intergenic
CAAGTTGACCAGAGCAGATA+TGG 0.339389 3.1:-84882657 MS.gene32638:CDS
CTCCTTGTGGATACTATGTT+TGG 0.345318 3.1:-84882953 MS.gene32638:CDS
ACTAGTGGCAACAGCTTGTT+TGG 0.346707 3.1:+84883222 None:intergenic
TGAAGCGAAAACAGGCTTCT+TGG 0.348544 3.1:+84883125 None:intergenic
TTCTCTCTCTCAACTATAAC+TGG 0.354403 3.1:-84882361 MS.gene32638:CDS
GCTTTCCCCATGTCGTCAAA+TGG 0.354659 3.1:-84883015 MS.gene32638:CDS
TTTGAGGCAGGGAAGTCTAA+TGG 0.397366 3.1:+84882841 None:intergenic
CAAAGAGGTGGATACATCTA+TGG 0.400880 3.1:-84883192 MS.gene32638:CDS
GAATTACAAGCACATCATAT+AGG 0.404564 3.1:-84882740 MS.gene32638:CDS
TTGCAGCTGAGAATGCTAAT+AGG 0.416238 3.1:+84882914 None:intergenic
TATGGTGAGGAGGGCATCAT+TGG 0.429607 3.1:-84883037 MS.gene32638:CDS
TGATAGGATCAGCAATTTAC+CGG 0.433335 3.1:-84883281 MS.gene32638:CDS
CCGATAACGACGATGATGAT+AGG 0.457013 3.1:-84883297 MS.gene32638:CDS
TGAGAGAGAGAAGCGTCAAA+TGG 0.460716 3.1:+84882372 None:intergenic
GTGGCAACAGCTTGTTTGGT+AGG 0.461291 3.1:+84883226 None:intergenic
GGACTCGCTGAAGCGAAAAC+AGG 0.467256 3.1:+84883117 None:intergenic
CTTTCCCCATGTCGTCAAAT+GGG 0.468994 3.1:-84883014 MS.gene32638:CDS
TCCTTCATCTCAGCGAATCT+GGG 0.469230 3.1:-84882817 MS.gene32638:CDS
ATTTCAGCGTTTCTCTGTGA+AGG 0.471581 3.1:-84882873 MS.gene32638:CDS
AAAGCAAACCATATCTGCTC+TGG 0.480362 3.1:+84882649 None:intergenic
ACCCAGATTCGCTGAGATGA+AGG 0.480843 3.1:+84882816 None:intergenic
GAGAGAGAGAAGCGTCAAAT+GGG 0.497200 3.1:+84882373 None:intergenic
GGAGTTTCTCTGCATACAAA+TGG 0.501972 3.1:-84882591 MS.gene32638:CDS
GTTGACGGCACTTCGTAATG+TGG 0.508436 3.1:-84882612 MS.gene32638:CDS
GGTTGACCCATTTGACGACA+TGG 0.535346 3.1:+84883008 None:intergenic
TTTCAGCGTTTCTCTGTGAA+GGG 0.536823 3.1:-84882872 MS.gene32638:CDS
CTTGTGGATACTATGTTTGG+TGG 0.538965 3.1:-84882950 MS.gene32638:CDS
GTGGATACTATGTTTGGTGG+TGG 0.544877 3.1:-84882947 MS.gene32638:CDS
TGGCAACAGCTTGTTTGGTA+GGG 0.545166 3.1:+84883227 None:intergenic
AAACTAAACAAACCTCACTA+AGG 0.546273 3.1:+84882288 None:intergenic
ATGGGTCAAATTATGAAAGG+TGG 0.547528 3.1:+84882391 None:intergenic
ATATGACAGATGAGAGTCTC+CGG 0.553457 3.1:+84883262 None:intergenic
TGGGTCAAATTATGAAAGGT+GGG 0.560877 3.1:+84882392 None:intergenic
AGTATCCACAAGGAGATCAA+TGG 0.564849 3.1:+84882961 None:intergenic
TCATATAGGTTTCAGATCTG+AGG 0.571902 3.1:-84882726 MS.gene32638:CDS
GATGTATCCACCTCTTTGCA+AGG 0.575620 3.1:+84883197 None:intergenic
CCTTGGGATTACATATGGTG+AGG 0.576166 3.1:-84883050 MS.gene32638:CDS
ACATTACGAAGTGCCGTCAA+CGG 0.581351 3.1:+84882614 None:intergenic
GGGATTACATATGGTGAGGA+GGG 0.588914 3.1:-84883046 MS.gene32638:CDS
CAACACCGCTTTGTACAACA+TGG 0.589951 3.1:+84882987 None:intergenic
TTGACCCATTTGACGACATG+GGG 0.593485 3.1:+84883010 None:intergenic
CAAATGGGTCAAATTATGAA+AGG 0.594863 3.1:+84882388 None:intergenic
GTTGACCCATTTGACGACAT+GGG 0.598506 3.1:+84883009 None:intergenic
TGGGATTACATATGGTGAGG+AGG 0.606014 3.1:-84883047 MS.gene32638:CDS
CTAGTGTCCTTGCAAAGAGG+TGG 0.606905 3.1:-84883204 MS.gene32638:CDS
CCTCTTTGCAAGGACACTAG+TGG 0.630257 3.1:+84883207 None:intergenic
TCTCTGCATACAAATGGACG+AGG 0.632893 3.1:-84882585 MS.gene32638:intron
CCACTAGTGTCCTTGCAAAG+AGG 0.639831 3.1:-84883207 MS.gene32638:CDS
CCTCACCATATGTAATCCCA+AGG 0.641476 3.1:+84883050 None:intergenic
CACCAAACATAGTATCCACA+AGG 0.642253 3.1:+84882951 None:intergenic
TGAGACCATTGATCTCCTTG+TGG 0.646015 3.1:-84882966 MS.gene32638:CDS
AAGGTGGGAATCTCATCATG+AGG 0.648345 3.1:+84882407 None:intergenic
AGGTGGGAATCTCATCATGA+GGG 0.658907 3.1:+84882408 None:intergenic
CTGAAATTTGAGAACAACAA+GGG 0.665662 3.1:+84882889 None:intergenic
TGAAAGCAAAACAGAATACA+CGG 0.666578 3.1:+84883096 None:intergenic
GTCAACCATGTTGTACAAAG+CGG 0.687677 3.1:-84882992 MS.gene32638:CDS
GCTGAAATTTGAGAACAACA+AGG 0.765708 3.1:+84882888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGACAAACACTCAGAAATA+AGG + chr3.1:84883158-84883177 None:intergenic 30.0%
AAGGGGAAATTATCAAAACA+AGG + chr3.1:84883139-84883158 None:intergenic 30.0%
AGAATGCTAATAGGCAATTT+AGG + chr3.1:84882691-84882710 None:intergenic 30.0%
AGACAAACACTCAGAAATAA+GGG + chr3.1:84883157-84883176 None:intergenic 30.0%
ATCGAAAATACACAACAATC+AGG + chr3.1:84883112-84883131 None:intergenic 30.0%
ATGTAAAAACACAGATGGAA+AGG - chr3.1:84883076-84883095 MS.gene32638:CDS 30.0%
CAAATGGGTCAAATTATGAA+AGG + chr3.1:84883226-84883245 None:intergenic 30.0%
CTGAAATTTGAGAACAACAA+GGG + chr3.1:84882725-84882744 None:intergenic 30.0%
GAATTACAAGCACATCATAT+AGG - chr3.1:84882871-84882890 MS.gene32638:CDS 30.0%
GCTTGTAATTCTTCAAGAAT+TGG + chr3.1:84882862-84882881 None:intergenic 30.0%
TGAAAGCAAAACAGAATACA+CGG + chr3.1:84882518-84882537 None:intergenic 30.0%
!! TTTCCATCTGTGTTTTTACA+TGG + chr3.1:84883077-84883096 None:intergenic 30.0%
!!! TCAAGATTTCATGTTGCTTT+TGG - chr3.1:84882828-84882847 MS.gene32638:CDS 30.0%
!!! TTATTGTCATTTTCCGTTGA+CGG - chr3.1:84882984-84883003 MS.gene32638:CDS 30.0%
ATGGGTCAAATTATGAAAGG+TGG + chr3.1:84883223-84883242 None:intergenic 35.0%
GACAAACACTCAGAAATAAG+GGG + chr3.1:84883156-84883175 None:intergenic 35.0%
GCTGAAATTTGAGAACAACA+AGG + chr3.1:84882726-84882745 None:intergenic 35.0%
TCATATAGGTTTCAGATCTG+AGG - chr3.1:84882885-84882904 MS.gene32638:CDS 35.0%
TGATAGGATCAGCAATTTAC+CGG - chr3.1:84882330-84882349 MS.gene32638:CDS 35.0%
TGGGTCAAATTATGAAAGGT+GGG + chr3.1:84883222-84883241 None:intergenic 35.0%
TTCTCTCTCTCAACTATAAC+TGG - chr3.1:84883250-84883269 MS.gene32638:CDS 35.0%
TTGCCATGTAAAAACACAGA+TGG - chr3.1:84883071-84883090 MS.gene32638:CDS 35.0%
! CCATCAAAAGTTTTTGCCTT+GGG - chr3.1:84882545-84882564 MS.gene32638:intron 35.0%
! TCCATCAAAAGTTTTTGCCT+TGG - chr3.1:84882544-84882563 MS.gene32638:intron 35.0%
! TTTTGCCTTGGGATTACATA+TGG - chr3.1:84882556-84882575 MS.gene32638:intron 35.0%
!!! AGGTCAAGTTTTTGAAGCTT+TGG + chr3.1:84883306-84883325 None:intergenic 35.0%
!!! GATTTCATGTTGCTTTTGGT+TGG - chr3.1:84882832-84882851 MS.gene32638:CDS 35.0%
!!! GGTCAAGTTTTTGAAGCTTT+GGG + chr3.1:84883305-84883324 None:intergenic 35.0%
AAAGCAAACCATATCTGCTC+TGG + chr3.1:84882965-84882984 None:intergenic 40.0%
AGTATCCACAAGGAGATCAA+TGG + chr3.1:84882653-84882672 None:intergenic 40.0%
ATATGACAGATGAGAGTCTC+CGG + chr3.1:84882352-84882371 None:intergenic 40.0%
ATTTCAGCGTTTCTCTGTGA+AGG - chr3.1:84882738-84882757 MS.gene32638:CDS 40.0%
CAAAGAGGTGGATACATCTA+TGG - chr3.1:84882419-84882438 MS.gene32638:CDS 40.0%
CACCAAACATAGTATCCACA+AGG + chr3.1:84882663-84882682 None:intergenic 40.0%
CCTATCATCATCGTCGTTAT+CGG + chr3.1:84882317-84882336 None:intergenic 40.0%
CTCCTTGTGGATACTATGTT+TGG - chr3.1:84882658-84882677 MS.gene32638:CDS 40.0%
CTTGTGGATACTATGTTTGG+TGG - chr3.1:84882661-84882680 MS.gene32638:CDS 40.0%
GGAGTTTCTCTGCATACAAA+TGG - chr3.1:84883020-84883039 MS.gene32638:CDS 40.0%
GTCAACCATGTTGTACAAAG+CGG - chr3.1:84882619-84882638 MS.gene32638:CDS 40.0%
TTGCAGCTGAGAATGCTAAT+AGG + chr3.1:84882700-84882719 None:intergenic 40.0%
TTTCAGCGTTTCTCTGTGAA+GGG - chr3.1:84882739-84882758 MS.gene32638:CDS 40.0%
! CCCAAGGCAAAAACTTTTGA+TGG + chr3.1:84882548-84882567 None:intergenic 40.0%
!!! AGATGAAGGATTTTGAGGCA+GGG + chr3.1:84882784-84882803 None:intergenic 40.0%
AAGGTGGGAATCTCATCATG+AGG + chr3.1:84883207-84883226 None:intergenic 45.0%
AGGTGGGAATCTCATCATGA+GGG + chr3.1:84883206-84883225 None:intergenic 45.0%
ATCCTTCATCTCAGCGAATC+TGG - chr3.1:84882793-84882812 MS.gene32638:CDS 45.0%
CAACACCGCTTTGTACAACA+TGG + chr3.1:84882627-84882646 None:intergenic 45.0%
CCGATAACGACGATGATGAT+AGG - chr3.1:84882314-84882333 MS.gene32638:CDS 45.0%
CCTCACCATATGTAATCCCA+AGG + chr3.1:84882564-84882583 None:intergenic 45.0%
CCTTGGGATTACATATGGTG+AGG - chr3.1:84882561-84882580 MS.gene32638:intron 45.0%
CTTTCCCCATGTCGTCAAAT+GGG - chr3.1:84882597-84882616 MS.gene32638:CDS 45.0%
GATGTATCCACCTCTTTGCA+AGG + chr3.1:84882417-84882436 None:intergenic 45.0%
GGGATTACATATGGTGAGGA+GGG - chr3.1:84882565-84882584 MS.gene32638:intron 45.0%
GTTGACCCATTTGACGACAT+GGG + chr3.1:84882605-84882624 None:intergenic 45.0%
TCCTTCATCTCAGCGAATCT+GGG - chr3.1:84882794-84882813 MS.gene32638:CDS 45.0%
TCTCTGCATACAAATGGACG+AGG - chr3.1:84883026-84883045 MS.gene32638:CDS 45.0%
TGAAGCGAAAACAGGCTTCT+TGG + chr3.1:84882489-84882508 None:intergenic 45.0%
TGAGACCATTGATCTCCTTG+TGG - chr3.1:84882645-84882664 MS.gene32638:CDS 45.0%
TGGGATTACATATGGTGAGG+AGG - chr3.1:84882564-84882583 MS.gene32638:intron 45.0%
TTGACCCATTTGACGACATG+GGG + chr3.1:84882604-84882623 None:intergenic 45.0%
! ACTAGTGGCAACAGCTTGTT+TGG + chr3.1:84882392-84882411 None:intergenic 45.0%
! CAAGTTGACCAGAGCAGATA+TGG - chr3.1:84882954-84882973 MS.gene32638:CDS 45.0%
! CGCTGAGATGAAGGATTTTG+AGG + chr3.1:84882789-84882808 None:intergenic 45.0%
! GTGGATACTATGTTTGGTGG+TGG - chr3.1:84882664-84882683 MS.gene32638:CDS 45.0%
! TGGCAACAGCTTGTTTGGTA+GGG + chr3.1:84882387-84882406 None:intergenic 45.0%
! TTTGAGGCAGGGAAGTCTAA+TGG + chr3.1:84882773-84882792 None:intergenic 45.0%
!! ACATTACGAAGTGCCGTCAA+CGG + chr3.1:84883000-84883019 None:intergenic 45.0%
!! GAGAGAGAGAAGCGTCAAAT+GGG + chr3.1:84883241-84883260 None:intergenic 45.0%
!! TGAGAGAGAGAAGCGTCAAA+TGG + chr3.1:84883242-84883261 None:intergenic 45.0%
!!! GAGATGAAGGATTTTGAGGC+AGG + chr3.1:84882785-84882804 None:intergenic 45.0%
ACCCAGATTCGCTGAGATGA+AGG + chr3.1:84882798-84882817 None:intergenic 50.0%
CCACTAGTGTCCTTGCAAAG+AGG - chr3.1:84882404-84882423 MS.gene32638:CDS 50.0%
CCTCTTTGCAAGGACACTAG+TGG + chr3.1:84882407-84882426 None:intergenic 50.0%
CTAGTGTCCTTGCAAAGAGG+TGG - chr3.1:84882407-84882426 MS.gene32638:CDS 50.0%
GCTTTCCCCATGTCGTCAAA+TGG - chr3.1:84882596-84882615 MS.gene32638:CDS 50.0%
GGTTGACCCATTTGACGACA+TGG + chr3.1:84882606-84882625 None:intergenic 50.0%
GTTGACGGCACTTCGTAATG+TGG - chr3.1:84882999-84883018 MS.gene32638:CDS 50.0%
! GTGGCAACAGCTTGTTTGGT+AGG + chr3.1:84882388-84882407 None:intergenic 50.0%
!! TATGGTGAGGAGGGCATCAT+TGG - chr3.1:84882574-84882593 MS.gene32638:intron 50.0%
GGACTCGCTGAAGCGAAAAC+AGG + chr3.1:84882497-84882516 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 84882301 84883332 84882301 ID=MS.gene32638
chr3.1 mRNA 84882301 84883332 84882301 ID=MS.gene32638.t1;Parent=MS.gene32638
chr3.1 exon 84882586 84883332 84882586 ID=MS.gene32638.t1.exon1;Parent=MS.gene32638.t1
chr3.1 CDS 84882586 84883332 84882586 ID=cds.MS.gene32638.t1;Parent=MS.gene32638.t1
chr3.1 exon 84882301 84882438 84882301 ID=MS.gene32638.t1.exon2;Parent=MS.gene32638.t1
chr3.1 CDS 84882301 84882438 84882301 ID=cds.MS.gene32638.t1;Parent=MS.gene32638.t1
Gene Sequence

>MS.gene32638

ATGTCATCAGTTGCCGATAACGACGATGATGATAGGATCAGCAATTTACCGGAGACTCTCATCTGTCATATTCTCTCTTTTCTCCCTACCAAACAAGCTGTTGCCACTAGTGTCCTTGCAAAGAGGTGGATACATCTATGGTGCTCAGTTCTTGCGATCAACTTCAGCAACACAGAGCTATATCACCAAGAAGCCTGTTTTCGCTTCAGCGAGTCCGTGTATTCTGTTTTGCTTTCACGTAATTCCATCAAAAGTTTTTGCCTTGGGATTACATATGGTGAGGAGGGCATCATTGGCTTTCCCCATGTCGTCAAATGGGTCAACCATGTTGTACAAAGCGGTGTTGAGACCATTGATCTCCTTGTGGATACTATGTTTGGTGGTGGTCCTAAATTGCCTATTAGCATTCTCAGCTGCAAGACCCTTGTTGTTCTCAAATTTCAGCGTTTCTCTGTGAAGGGCTTTTCTTCCATTAGACTTCCCTGCCTCAAAATCCTTCATCTCAGCGAATCTGGGTTTTTTAATATTCAAGATTTCATGTTGCTTTTGGTTGGATGTCCAATTCTTGAAGAATTACAAGCACATCATATAGGTTTCAGATCTGAGGATTCTCTTACATATCAAGAGCGTAATAGCTCAAGCTTAAGTTTAAGCAAGTTGACCAGAGCAGATATGGTTTGCTTTTATTGTCATTTTCCGTTGACGGCACTTCGTAATGTGGAGTTTCTCTGCATACAAATGGACGAGGTTTGAATTTAATTATGAATATGTTGCCATGTAAAAACACAGATGGAAAGGATATGAAAAACCTGATTGTTGTGTATTTTCGATTCTGCCTTGTTTTGATAATTTCCCCTTATTTCTGAGTGTTTGTCTTTCTACATTGTTGTTTAGATGTATCGCCCTCATGATGAGATTCCCACCTTTCATAATTTGACCCATTTGACGCTTCTCTCTCTCAACTATAACTGGAAGCTCTTAGTACATGTGTTGAGTCACTGCCCAAAGCTTCAAAAACTTGACCTTAGTGAG

Protein sequence

>MS.gene32638.t1

MSSVADNDDDDRISNLPETLICHILSFLPTKQAVATSVLAKRWIHLWCSVLAINFSNTELYHQEACFRFSESVYSVLLSRNSIKSFCLGITYGEEGIIGFPHVVKWVNHVVQSGVETIDLLVDTMFGGGPKLPISILSCKTLVVLKFQRFSVKGFSSIRLPCLKILHLSESGFFNIQDFMLLLVGCPILEELQAHHIGFRSEDSLTYQERNSSSLSLSKLTRADMVCFYCHFPLTALRNVEFLCIQMDEMYRPHDEIPTFHNLTHLTLLSLNYNWKLLVHVLSHCPKLQKLDLSE