AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49513


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49513.t1 MTR_8g070950 92.045 440 33 1 1 438 1 440 0.0 805
MS.gene49513.t1 MTR_8g062010 62.416 447 134 11 9 436 3 434 3.20e-178 505
MS.gene49513.t1 MTR_8g062080 57.516 459 162 9 1 436 1 449 1.39e-170 486
MS.gene49513.t1 MTR_8g062310 59.624 426 152 8 15 437 25 433 1.85e-166 475
MS.gene49513.t1 MTR_8g058965 56.211 475 154 13 1 436 1 460 6.81e-161 462
MS.gene49513.t1 MTR_8g469020 55.240 458 162 9 15 437 7 456 1.37e-158 456
MS.gene49513.t1 MTR_8g062300 53.265 490 166 13 1 436 1 481 6.01e-154 445
MS.gene49513.t1 MTR_8g467790 56.915 376 118 7 15 376 148 493 3.41e-132 390
MS.gene49513.t1 MTR_4g050250 51.991 427 149 13 1 378 1 420 1.36e-125 371
MS.gene49513.t1 MTR_2g083840 42.797 472 215 19 1 432 1 457 2.58e-93 289
MS.gene49513.t1 MTR_8g468810 41.632 478 218 20 1 432 1 463 3.57e-92 286
MS.gene49513.t1 MTR_8g058970 40.994 483 225 15 3 432 2 477 5.62e-88 276
MS.gene49513.t1 MTR_8g014260 43.011 465 218 22 1 432 1 451 1.96e-85 269
MS.gene49513.t1 MTR_8g062270 40.789 456 213 17 15 431 16 453 8.11e-85 267
MS.gene49513.t1 MTR_4g032730 36.952 479 241 14 1 431 1 466 4.47e-79 253
MS.gene49513.t1 MTR_8g467800 39.270 466 236 14 7 437 5 458 1.02e-74 241
MS.gene49513.t1 MTR_8g468760 39.207 454 201 14 12 431 6 418 1.91e-73 236
MS.gene49513.t1 MTR_2g086020 81.250 144 27 0 294 437 177 320 1.94e-73 233
MS.gene49513.t1 MTR_2g086020 47.682 151 58 5 41 179 1 142 3.58e-32 125
MS.gene49513.t1 MTR_8g468840 39.062 448 230 14 14 430 13 448 1.09e-72 236
MS.gene49513.t1 MTR_5g092960 37.554 466 247 14 1 431 5 461 1.40e-72 236
MS.gene49513.t1 MTR_8g468810 40.731 383 174 16 1 342 1 371 4.92e-67 218
MS.gene49513.t1 MTR_8g445780 40.342 409 201 20 1 385 1 390 1.59e-65 215
MS.gene49513.t1 MTR_8g468810 42.484 306 129 14 1 270 1 295 1.19e-56 190
MS.gene49513.t1 MTR_8g468810 42.345 307 130 14 1 271 1 296 2.06e-56 189
MS.gene49513.t1 MTR_8g468810 42.345 307 130 14 1 271 1 296 4.91e-56 189
MS.gene49513.t1 MTR_8g014160 34.375 448 205 21 13 432 39 425 7.39e-55 188
MS.gene49513.t1 MTR_5g092960 36.997 373 198 11 1 342 5 371 1.18e-48 171
MS.gene49513.t1 MTR_4g024710 37.755 294 160 12 154 432 62 347 8.88e-42 151
MS.gene49513.t1 MTR_8g467800 39.322 295 144 10 7 273 5 292 1.42e-38 142
MS.gene49513.t1 MTR_1g041245 30.735 449 219 18 9 432 5 386 1.46e-37 141
MS.gene49513.t1 MTR_8g014210 39.916 238 125 7 206 432 1 231 4.84e-37 135
MS.gene49513.t1 MTR_5g021550 49.689 161 62 8 5 148 4 162 2.54e-32 120
MS.gene49513.t1 MTR_8g077460 48.120 133 66 3 300 432 246 375 6.11e-32 125
MS.gene49513.t1 MTR_8g077460 37.500 248 124 12 1 227 1 238 1.49e-27 113
MS.gene49513.t1 MTR_7g056433 27.483 433 250 15 12 432 9 389 3.24e-31 124
MS.gene49513.t1 MTR_4g024745 35.714 280 149 12 155 415 17 284 2.10e-29 116
MS.gene49513.t1 MTR_5g008950 27.790 439 220 19 17 432 1 365 2.22e-29 118
MS.gene49513.t1 MTR_5g080710 29.412 442 265 19 9 424 26 446 2.62e-29 119
MS.gene49513.t1 MTR_3g099800 65.517 87 29 1 344 429 19 105 5.44e-29 109
MS.gene49513.t1 MTR_7g098510 28.444 450 245 18 1 432 1 391 1.75e-26 110
MS.gene49513.t1 MTR_1g108820 29.787 423 242 19 15 429 8 383 2.51e-25 107
MS.gene49513.t1 MTR_6g022500 28.311 438 232 22 15 432 101 476 4.31e-25 107
MS.gene49513.t1 MTR_5g008920 26.889 450 240 19 8 435 2 384 1.15e-24 105
MS.gene49513.t1 MTR_5g084070 27.991 443 271 18 6 424 1 419 1.43e-24 105
MS.gene49513.t1 MTR_1g085120 28.375 437 239 21 14 432 166 546 6.65e-24 104
MS.gene49513.t1 MTR_1g085120 28.375 437 239 21 14 432 91 471 6.90e-24 103
MS.gene49513.t1 MTR_6g011460 30.100 402 212 16 15 404 46 390 2.39e-23 102
MS.gene49513.t1 MTR_3g108150 26.218 431 249 15 14 431 12 386 2.69e-23 101
MS.gene49513.t1 MTR_7g033915 26.923 442 222 19 9 431 5 364 5.72e-23 100
MS.gene49513.t1 MTR_8g014290 42.208 154 69 7 13 148 8 159 6.01e-23 95.1
MS.gene49513.t1 MTR_2g007450 27.009 448 248 17 15 429 16 417 4.78e-22 98.2
MS.gene49513.t1 MTR_7g026500 27.212 452 247 22 3 431 2 394 1.33e-21 96.7
MS.gene49513.t1 MTR_3g109982 29.325 474 236 23 8 411 10 454 1.46e-21 98.2
MS.gene49513.t1 MTR_7g056287 26.728 434 238 17 14 431 2 371 1.51e-21 95.9
MS.gene49513.t1 MTR_7g098480 26.174 447 255 11 1 431 1 388 2.01e-21 96.7
MS.gene49513.t1 MTR_4g024720 41.989 181 69 10 1 149 1 177 4.64e-21 91.3
MS.gene49513.t1 MTR_7g056277 26.591 440 239 17 10 431 254 627 4.79e-21 96.3
MS.gene49513.t1 MTR_5g058100 27.664 441 237 18 11 431 5 383 9.98e-21 94.0
MS.gene49513.t1 MTR_7g115270 35.484 217 104 12 5 199 2 204 2.19e-20 92.8
MS.gene49513.t1 MTR_7g007080 28.665 457 216 22 13 435 2 382 2.26e-20 92.8
MS.gene49513.t1 MTR_5g073420 32.984 191 112 8 15 195 11 195 1.18e-19 90.5
MS.gene49513.t1 MTR_7g056447 34.694 196 106 9 9 194 3 186 6.10e-19 87.0
MS.gene49513.t1 MTR_4g039440 26.577 444 235 19 15 432 34 412 8.09e-19 88.6
MS.gene49513.t1 MTR_8g085430 34.500 200 102 9 15 196 11 199 1.29e-18 87.0
MS.gene49513.t1 MTR_2g008310 27.126 435 235 19 15 432 2 371 3.40e-18 86.3
MS.gene49513.t1 MTR_7g032380 34.031 191 108 8 15 196 11 192 8.99e-18 84.7
MS.gene49513.t1 MTR_7g032380 33.577 137 78 4 305 432 224 356 9.45e-11 63.5
MS.gene49513.t1 MTR_3g105060 26.304 441 233 19 9 432 8 373 1.09e-17 84.7
MS.gene49513.t1 MTR_3g108560 26.437 435 242 19 12 431 17 388 1.36e-17 84.7
MS.gene49513.t1 MTR_2g008320 27.294 436 239 19 15 432 52 427 4.37e-17 83.6
MS.gene49513.t1 MTR_4g024770 62.903 62 20 2 1 60 8 68 4.45e-17 76.3
MS.gene49513.t1 MTR_5g061680 33.333 204 113 9 15 203 11 206 1.48e-16 80.9
MS.gene49513.t1 MTR_7g056420 25.986 431 228 18 9 424 3 357 1.48e-16 82.8
MS.gene49513.t1 MTR_7g056430 25.986 431 228 18 9 424 3 357 1.50e-16 82.8
MS.gene49513.t1 MTR_8g014230 46.429 84 43 2 342 425 17 98 3.98e-16 74.3
MS.gene49513.t1 MTR_1089s0010 31.765 170 101 6 11 174 4 164 1.21e-15 78.6
MS.gene49513.t1 MTR_1089s0010 30.935 139 84 4 301 432 246 379 4.85e-12 67.8
MS.gene49513.t1 MTR_1g053025 27.088 443 237 23 15 429 2 386 1.25e-15 78.6
MS.gene49513.t1 MTR_4g056020 27.854 438 238 20 12 401 6 413 1.92e-15 78.6
MS.gene49513.t1 MTR_4g056030 35.354 198 108 10 12 197 6 195 3.61e-15 77.8
MS.gene49513.t1 MTR_7g033990 30.583 206 112 8 9 197 5 196 3.63e-15 77.4
MS.gene49513.t1 MTR_7g034110 32.500 200 110 8 15 199 11 200 3.66e-15 77.0
MS.gene49513.t1 MTR_5g073370 27.764 407 222 18 12 405 2 349 4.66e-15 77.0
MS.gene49513.t1 MTR_4g098590 27.451 408 217 18 17 399 1 354 6.84e-15 76.3
MS.gene49513.t1 MTR_3g467400 31.683 202 111 10 15 195 3 198 1.59e-14 75.1
MS.gene49513.t1 MTR_3g082890 30.182 275 140 12 1 232 1 266 1.83e-14 75.5
MS.gene49513.t1 MTR_3g082890 30.418 263 133 11 11 232 93 346 2.01e-14 75.5
MS.gene49513.t1 MTR_3g107120 25.060 419 227 17 10 399 4 364 3.20e-14 74.3
MS.gene49513.t1 MTR_1g108820 28.701 331 187 15 15 338 8 296 5.12e-14 73.6
MS.gene49513.t1 MTR_7g033945 32.584 178 97 8 9 174 5 171 6.60e-14 70.1
MS.gene49513.t1 MTR_3g107100 28.431 204 126 9 12 203 8 203 7.73e-14 73.2
MS.gene49513.t1 MTR_3g107160 26.256 438 245 17 12 432 7 383 7.79e-14 73.2
MS.gene49513.t1 MTR_7g114710 28.340 247 147 9 15 242 13 248 2.06e-13 71.6
MS.gene49513.t1 MTR_5g083890 25.747 435 239 17 14 414 5 389 2.10e-13 72.4
MS.gene49513.t1 MTR_8g014180 59.322 59 21 2 1 57 1 58 2.17e-13 65.1
MS.gene49513.t1 MTR_3g095600 31.188 202 107 8 15 209 4 180 2.44e-13 70.9
MS.gene49513.t1 MTR_5g087940 35.057 174 100 7 2 174 13 174 2.52e-13 71.6
MS.gene49513.t1 MTR_6g022360 32.461 191 97 9 15 195 43 211 3.24e-13 71.2
MS.gene49513.t1 MTR_2g007500 34.158 202 105 10 9 199 8 192 5.40e-13 70.1
MS.gene49513.t1 MTR_7g055943 32.124 193 108 10 15 195 40 221 5.76e-13 70.9
MS.gene49513.t1 MTR_1g090900 36.585 164 98 5 12 174 8 166 5.85e-13 68.2
MS.gene49513.t1 MTR_4g080590 26.014 419 278 13 14 410 22 430 6.66e-13 70.5
MS.gene49513.t1 MTR_2g020170 36.585 123 69 5 13 129 20 139 8.55e-13 65.9
MS.gene49513.t1 MTR_1g085120 32.812 192 106 10 14 193 178 358 1.19e-12 70.1
MS.gene49513.t1 MTR_3g110010 32.124 193 115 9 12 198 10 192 1.63e-12 70.1
MS.gene49513.t1 MTR_7g060470 24.641 418 237 17 14 406 2 366 1.72e-12 68.9
MS.gene49513.t1 MTR_5g045510 31.016 187 116 8 15 195 12 191 1.80e-12 68.9
MS.gene49513.t1 MTR_7g034115 33.163 196 105 9 15 197 11 193 2.08e-12 68.9
MS.gene49513.t1 MTR_3g040700 29.000 200 126 7 5 195 33 225 3.81e-12 68.2
MS.gene49513.t1 MTR_5g058000 32.258 186 109 9 15 192 8 184 6.47e-12 67.4
MS.gene49513.t1 MTR_7g098570 28.326 233 134 9 1 212 2 222 7.83e-12 67.4
MS.gene49513.t1 MTR_3g095640 32.895 152 89 6 15 156 18 166 1.25e-11 63.5
MS.gene49513.t1 MTR_3g036250 29.293 198 114 9 12 195 2 187 1.70e-11 65.9
MS.gene49513.t1 MTR_6g088705 31.527 203 103 10 1 185 1 185 1.97e-11 64.3
MS.gene49513.t1 MTR_6g040270 33.133 166 94 8 17 175 10 165 2.56e-11 65.5
MS.gene49513.t1 MTR_3g023630 31.414 191 111 11 15 195 8 188 2.59e-11 65.5
MS.gene49513.t1 MTR_6g044572 32.258 217 107 13 15 197 2 212 3.03e-11 65.1
MS.gene49513.t1 MTR_1g095750 42.857 84 43 3 3 86 34 112 4.36e-11 61.2
MS.gene49513.t1 MTR_3g018680 33.514 185 97 10 2 174 9 179 4.99e-11 64.7
MS.gene49513.t1 MTR_3g463830 34.722 144 80 7 12 150 60 194 5.43e-11 64.3
MS.gene49513.t1 MTR_3g114200 34.752 141 84 5 13 150 17 152 6.29e-11 61.2
MS.gene49513.t1 MTR_6g044560 32.258 217 107 13 15 197 178 388 6.41e-11 64.7
MS.gene49513.t1 MTR_1g066830 29.381 194 119 9 15 199 8 192 6.53e-11 64.3
MS.gene49513.t1 MTR_3g108560 29.688 192 117 10 12 198 17 195 8.03e-11 63.5
MS.gene49513.t1 MTR_1g038710 33.010 206 112 10 13 203 17 211 8.21e-11 64.3
MS.gene49513.t1 MTR_8g006910 33.516 182 101 9 2 174 39 209 8.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49513.t1 AT1G78750 24.841 471 291 17 2 429 5 455 6.60e-26 109
MS.gene49513.t1 AT1G78750 24.841 471 291 17 2 429 5 455 6.60e-26 109
MS.gene49513.t1 AT5G56420 26.471 442 278 15 14 432 5 422 2.37e-25 107
MS.gene49513.t1 AT5G56420 26.471 442 278 15 14 432 5 422 2.37e-25 107
MS.gene49513.t1 AT5G56420 26.471 442 278 15 14 432 5 422 2.37e-25 107
MS.gene49513.t1 AT5G56560 27.790 439 277 17 12 432 2 418 3.42e-24 104
MS.gene49513.t1 AT5G53840 26.991 452 271 20 10 429 13 437 4.13e-22 98.6
MS.gene49513.t1 AT1G78760 25.764 458 289 20 7 433 8 445 1.65e-21 97.1
MS.gene49513.t1 AT1G69630 26.166 493 248 23 3 429 6 448 9.83e-21 94.7
MS.gene49513.t1 AT2G26030 27.093 454 278 18 15 429 4 443 2.05e-20 93.6
MS.gene49513.t1 AT2G26030 27.313 454 272 18 15 429 4 438 2.16e-20 93.6
MS.gene49513.t1 AT2G26030 27.313 454 272 18 15 429 4 438 2.16e-20 93.6
MS.gene49513.t1 AT5G50270 28.125 416 245 18 15 399 2 394 4.06e-20 92.4
MS.gene49513.t1 AT1G16930 25.155 485 274 22 1 432 1 449 4.87e-20 92.4
MS.gene49513.t1 AT1G16930 25.155 485 274 22 1 432 1 449 4.87e-20 92.4
MS.gene49513.t1 AT1G16930 25.155 485 274 22 1 432 1 449 4.87e-20 92.4
MS.gene49513.t1 AT4G10400 27.500 440 263 19 15 431 2 408 2.69e-19 89.7
MS.gene49513.t1 AT4G10400 27.500 440 263 19 15 431 2 408 2.69e-19 89.7
MS.gene49513.t1 AT4G10400 27.500 440 263 19 15 431 2 408 2.69e-19 89.7
MS.gene49513.t1 AT4G13985 25.813 461 281 18 11 429 15 456 5.13e-19 89.4
MS.gene49513.t1 AT5G22730 25.110 454 285 17 14 429 27 463 8.70e-19 89.0
MS.gene49513.t1 AT5G22730 25.110 454 285 17 14 429 27 463 8.70e-19 89.0
MS.gene49513.t1 AT3G58920 26.971 482 273 20 15 432 2 468 1.35e-18 88.2
MS.gene49513.t1 AT3G59200 31.088 193 115 7 15 195 7 193 4.59e-18 85.9
MS.gene49513.t1 AT3G50710 26.829 451 272 22 15 432 2 427 4.69e-18 86.3
MS.gene49513.t1 AT5G22670 25.270 463 278 19 8 429 4 439 9.19e-18 85.5
MS.gene49513.t1 AT4G26340 25.455 440 284 16 15 432 2 419 1.15e-17 85.1
MS.gene49513.t1 AT3G59200 31.088 193 115 7 15 195 7 193 1.87e-17 85.1
MS.gene49513.t1 AT1G66290 26.681 461 261 24 11 429 25 450 2.38e-17 84.3
MS.gene49513.t1 AT1G51370 25.277 451 268 20 11 427 15 430 4.48e-17 83.6
MS.gene49513.t1 AT1G32375 28.348 448 264 23 15 432 2 422 5.87e-17 82.8
MS.gene49513.t1 AT1G32375 28.348 448 264 23 15 432 2 422 5.87e-17 82.8
MS.gene49513.t1 AT5G60610 26.225 408 249 18 15 396 2 383 1.11e-16 82.0
MS.gene49513.t1 AT5G60610 26.225 408 249 18 15 396 2 383 1.11e-16 82.0
MS.gene49513.t1 AT5G22610 24.454 458 294 18 1 430 1 434 1.13e-16 82.4
MS.gene49513.t1 AT5G22700 25.899 417 263 18 4 409 32 413 2.62e-16 81.3
MS.gene49513.t1 AT5G56400 26.923 442 280 18 15 432 33 455 2.96e-16 80.9
MS.gene49513.t1 AT5G22660 25.581 473 278 22 1 429 1 443 3.94e-16 80.5
MS.gene49513.t1 AT5G44950 25.835 449 280 17 14 427 3 433 4.22e-16 80.5
MS.gene49513.t1 AT4G00160 28.329 413 248 19 5 391 6 396 4.87e-16 80.5
MS.gene49513.t1 AT5G22610 25.105 474 301 19 1 430 1 464 1.12e-15 79.3
MS.gene49513.t1 AT5G50270 32.143 224 127 11 15 225 2 213 4.42e-15 76.3
MS.gene49513.t1 AT3G49150 29.817 218 135 9 13 221 14 222 4.53e-15 77.4
MS.gene49513.t1 AT5G38392 31.122 196 117 7 15 195 2 194 4.97e-15 74.3
MS.gene49513.t1 AT3G59190 29.469 207 123 8 5 195 2 201 9.37e-15 76.6
MS.gene49513.t1 AT3G59190 29.469 207 123 8 5 195 2 201 9.87e-15 75.9
MS.gene49513.t1 AT1G66310 26.170 470 270 26 2 429 5 439 9.95e-15 76.3
MS.gene49513.t1 AT4G09920 27.536 276 170 13 15 269 2 268 1.55e-14 74.3
MS.gene49513.t1 AT4G09920 27.536 276 170 13 15 269 2 268 1.55e-14 74.3
MS.gene49513.t1 AT4G09920 27.536 276 170 13 15 269 2 268 1.55e-14 74.3
MS.gene49513.t1 AT5G56370 25.223 448 277 17 15 432 2 421 1.72e-14 75.5
MS.gene49513.t1 AT5G56370 25.223 448 277 17 15 432 2 421 1.72e-14 75.5
MS.gene49513.t1 AT4G09920 26.804 291 179 14 15 280 2 283 2.42e-14 73.9
MS.gene49513.t1 AT4G09920 26.804 291 179 14 15 280 2 283 2.42e-14 73.9
MS.gene49513.t1 AT5G22700 30.000 200 124 7 4 197 32 221 4.51e-14 74.3
MS.gene49513.t1 AT3G60040 27.007 411 230 20 14 381 12 395 6.24e-14 74.3
MS.gene49513.t1 AT5G35995 30.172 232 141 11 15 239 5 222 6.27e-14 73.9
MS.gene49513.t1 AT5G35995 30.172 232 141 11 15 239 5 222 6.27e-14 73.9
MS.gene49513.t1 AT5G22700 31.217 189 114 7 15 197 6 184 7.13e-14 73.6
MS.gene49513.t1 AT5G22700 31.217 189 114 7 15 197 6 184 7.13e-14 73.6
MS.gene49513.t1 AT5G22700 31.217 189 114 7 15 197 6 184 7.13e-14 73.6
MS.gene49513.t1 AT5G22700 31.217 189 114 7 15 197 6 184 7.13e-14 73.6
MS.gene49513.t1 AT3G42770 27.133 457 244 20 17 424 1 417 9.43e-14 73.6
MS.gene49513.t1 AT5G53640 31.527 203 121 9 13 209 20 210 1.10e-13 70.5
MS.gene49513.t1 AT1G80470 25.902 471 281 25 1 435 1 439 1.23e-13 73.2
MS.gene49513.t1 AT3G60040 26.265 415 228 20 14 381 232 615 1.26e-13 73.6
MS.gene49513.t1 AT3G60040 26.265 415 228 20 14 381 231 614 1.27e-13 73.6
MS.gene49513.t1 AT3G60040 26.265 415 228 20 14 381 231 614 1.29e-13 73.6
MS.gene49513.t1 AT5G41840 30.093 216 126 12 15 209 14 225 1.32e-13 73.2
MS.gene49513.t1 AT3G60040 26.265 415 228 20 14 381 229 612 1.54e-13 73.2
MS.gene49513.t1 AT5G56690 29.843 191 119 8 17 197 4 189 2.71e-13 71.6
MS.gene49513.t1 AT1G13780 24.594 431 261 18 15 399 10 422 4.34e-13 71.2
MS.gene49513.t1 AT5G18780 24.672 458 286 17 8 429 4 438 4.92e-13 71.2
MS.gene49513.t1 AT5G18780 24.672 458 286 17 8 429 4 438 4.92e-13 71.2
MS.gene49513.t1 AT4G14096 27.612 268 156 13 15 257 8 262 5.18e-13 71.2
MS.gene49513.t1 AT4G14096 27.612 268 156 13 15 257 8 262 5.18e-13 71.2
MS.gene49513.t1 AT2G29930 24.691 486 278 23 5 431 2 458 1.05e-12 70.1
MS.gene49513.t1 AT2G29930 24.691 486 278 23 5 431 2 458 1.05e-12 70.1
MS.gene49513.t1 AT3G58860 29.412 238 145 10 11 235 3 230 1.59e-12 69.7
MS.gene49513.t1 AT5G56390 28.261 460 250 26 15 431 2 424 1.79e-12 69.3
MS.gene49513.t1 AT5G56560 28.906 256 152 11 12 255 2 239 3.31e-12 68.9
MS.gene49513.t1 AT1G55660 31.414 191 115 9 15 195 53 237 4.34e-12 67.8
MS.gene49513.t1 AT1G55660 31.414 191 115 9 15 195 53 237 4.97e-12 68.2
MS.gene49513.t1 AT5G18780 29.694 229 141 9 8 228 4 220 5.29e-12 67.4
MS.gene49513.t1 AT5G18780 29.694 229 141 9 8 228 4 220 5.29e-12 67.4
MS.gene49513.t1 AT3G26922 30.612 196 122 8 6 195 5 192 6.83e-12 66.6
MS.gene49513.t1 AT3G26922 30.612 196 122 8 6 195 5 192 6.83e-12 66.6
MS.gene49513.t1 AT3G58980 26.226 469 263 24 15 430 2 440 8.09e-12 67.8
MS.gene49513.t1 AT3G59000 31.395 172 102 7 15 174 2 169 9.92e-12 67.0
MS.gene49513.t1 AT3G59230 28.780 205 127 8 7 195 4 205 1.04e-11 67.0
MS.gene49513.t1 AT3G59210 28.519 270 157 11 14 257 6 265 1.52e-11 66.6
MS.gene49513.t1 AT3G59210 28.519 270 157 11 14 257 6 265 1.52e-11 66.6
MS.gene49513.t1 AT3G59210 28.519 270 157 11 14 257 6 265 1.52e-11 66.6
MS.gene49513.t1 AT3G59210 28.519 270 157 11 14 257 6 265 1.52e-11 66.6
MS.gene49513.t1 AT3G59210 28.519 270 157 11 14 257 6 265 1.52e-11 66.6
MS.gene49513.t1 AT5G22660 29.557 203 125 8 1 197 1 191 1.87e-11 65.5
MS.gene49513.t1 AT4G22280 26.316 437 276 17 15 431 2 412 3.19e-11 65.5
MS.gene49513.t1 AT4G13960 30.667 225 130 8 15 227 2 212 3.87e-11 65.1
MS.gene49513.t1 AT4G13960 30.667 225 130 8 15 227 2 212 3.87e-11 65.1
MS.gene49513.t1 AT4G00315 31.414 191 115 9 15 195 2 186 5.04e-11 64.7
MS.gene49513.t1 AT5G56810 26.174 447 268 19 15 429 15 431 8.76e-11 63.9

Find 111 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCACAGCTCAAACATTT+TGG 0.159569 8.1:+33852540 None:intergenic
TGAGAGTTTGCACCTTAATT+TGG 0.204820 8.1:+33851122 None:intergenic
CGTTCTAAACGTCGATGATT+TGG 0.278671 8.1:-33852476 MS.gene49513:CDS
CGTTGGCAACTTTCATAGTA+TGG 0.291851 8.1:-33851916 MS.gene49513:CDS
CCAGCTCCGTCTCCAAATTA+AGG 0.329783 8.1:-33851134 None:intergenic
CTGCTTCAACTCGAATCTTC+TGG 0.334716 8.1:-33851610 MS.gene49513:CDS
TCTCTCTGCCTGCCCTGTGC+TGG 0.354218 8.1:-33852090 MS.gene49513:CDS
CTCACAGGTGGCGACACCTC+TGG 0.355297 8.1:-33852714 MS.gene49513:CDS
GAGAATGTTGAACTTTGATA+TGG 0.365796 8.1:+33852180 None:intergenic
GGAAGAGGTTGTTGAGAATA+GGG 0.378113 8.1:+33851844 None:intergenic
AACCATCACCGTTGAGAACT+TGG 0.381357 8.1:-33851400 MS.gene49513:CDS
CTGCCCTGTGCTGGAAACTA+TGG 0.383525 8.1:-33852081 MS.gene49513:CDS
ACTGGTGGATTTCAAGCTCT+TGG 0.397305 8.1:+33851995 None:intergenic
TTGGGAGGAAGGAGAGTATA+TGG 0.397738 8.1:+33852770 None:intergenic
AACTCTGGATAATTTAGAAC+AGG 0.400095 8.1:+33851666 None:intergenic
CCTTAATTTGGAGACGGAGC+TGG 0.403747 8.1:+33851134 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.413834 8.1:+33851568 None:intergenic
ATTCACATTGAAGGATATCA+AGG 0.416044 8.1:-33851326 MS.gene49513:CDS
TGGAAGAGGTTGTTGAGAAT+AGG 0.418982 8.1:+33851843 None:intergenic
CTGACTTATATTCACATTGA+AGG 0.419150 8.1:-33851335 MS.gene49513:CDS
CTGTGGTTCCGTGCTGCCAC+TGG 0.421703 8.1:-33852526 MS.gene49513:CDS
GGACCGATTGAGTAGTTTAC+CGG 0.425932 8.1:-33852806 MS.gene49513:CDS
CAGTTGATGAAGAGGGAAGG+AGG 0.429220 8.1:+33852445 None:intergenic
TGAAATAAATTGCGAAACTC+TGG 0.431497 8.1:+33851651 None:intergenic
CGTTCAAAGATATGTCTTCA+AGG 0.436000 8.1:+33852045 None:intergenic
ACACCTCTGGGAGCATCTCC+AGG 0.444775 8.1:-33852701 MS.gene49513:CDS
GGAGAGTATATGGCATAGAA+TGG 0.444991 8.1:+33852780 None:intergenic
ACGGAACTTACGAATGTTGC+GGG 0.449382 8.1:+33852585 None:intergenic
GCCAACGATGCCCATGGCAT+GGG 0.458840 8.1:+33851932 None:intergenic
TACGAATGTTGCGGGATCTA+CGG 0.459610 8.1:+33852593 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.459725 8.1:+33851611 None:intergenic
CTTAATTTGGAGACGGAGCT+GGG 0.467049 8.1:+33851135 None:intergenic
TCACAGGTGGCGACACCTCT+GGG 0.473183 8.1:-33852713 MS.gene49513:CDS
AGTTGATGAAGAGGGAAGGA+GGG 0.475091 8.1:+33852446 None:intergenic
CCCCATGCCATGGGCATCGT+TGG 0.477463 8.1:-33851933 MS.gene49513:CDS
AGGTCTTCGACTTTGACGAC+TGG 0.482564 8.1:-33852681 MS.gene49513:CDS
TGGTGTAGAGACTGTGTATC+CGG 0.484617 8.1:-33852123 MS.gene49513:CDS
TCGCATGACACAGAACCCTT+TGG 0.490917 8.1:+33851170 None:intergenic
CTTCAATGTGAATATAAGTC+AGG 0.492415 8.1:+33851336 None:intergenic
ATGTCAAATGACGCGAAAGT+AGG 0.492783 8.1:+33851796 None:intergenic
GAGCTGAAGGAAGGTGGAAT+GGG 0.492788 8.1:+33852017 None:intergenic
TGCCAACGATGCCCATGGCA+TGG 0.494789 8.1:+33851931 None:intergenic
TTTCAAGCTCTTGGAGCTGA+AGG 0.498482 8.1:+33852004 None:intergenic
CCACCAGTGACAATTTCACT+TGG 0.513037 8.1:-33851980 MS.gene49513:CDS
GGAGCTGAAGGAAGGTGGAA+TGG 0.513985 8.1:+33852016 None:intergenic
TTGTGACGGAGGTTCGAGTT+GGG 0.515633 8.1:+33852752 None:intergenic
TTCTTGAAGGTGGGGACCAG+TGG 0.516341 8.1:+33852510 None:intergenic
GAGAGAGAGTTCTTGAAGGT+GGG 0.520309 8.1:+33852501 None:intergenic
CGGTGAGAGAGAGTTCTTGA+AGG 0.520852 8.1:+33852497 None:intergenic
TCCCAAGTTCTCAACGGTGA+TGG 0.531325 8.1:+33851398 None:intergenic
AGTTTGAGTCTCTTGAGTGA+TGG 0.537670 8.1:+33852146 None:intergenic
TGTTAATACTGCAGTCTGCA+TGG 0.541343 8.1:-33852212 MS.gene49513:intron
ACCGTTGAGAACTTGGGAGC+CGG 0.541482 8.1:-33851393 MS.gene49513:CDS
ATATCCATAGTTTCCAGCAC+AGG 0.546443 8.1:+33852077 None:intergenic
GGAGGTTCGAGTTGGGAGGA+AGG 0.547871 8.1:+33852759 None:intergenic
TTCGCGTCATTTGACATCAA+AGG 0.548380 8.1:-33851790 MS.gene49513:intron
CCGTCTCAACTGTGATTACC+CGG 0.548978 8.1:-33852566 MS.gene49513:CDS
TTGCAGTTGATGAAGAGGGA+AGG 0.550454 8.1:+33852442 None:intergenic
AGATTGACTGACATACCAAA+GGG 0.555026 8.1:-33851185 MS.gene49513:CDS
ATTGTGACGGAGGTTCGAGT+TGG 0.555423 8.1:+33852751 None:intergenic
AAGCTCTTGGAGCTGAAGGA+AGG 0.556513 8.1:+33852008 None:intergenic
GATATATATCCCCATGCCAT+GGG 0.557465 8.1:-33851942 MS.gene49513:CDS
TGAGAGAGAGTTCTTGAAGG+TGG 0.559302 8.1:+33852500 None:intergenic
TGATATATATCCCCATGCCA+TGG 0.559722 8.1:-33851943 MS.gene49513:CDS
ACAAGTACCGGAGGGAAATG+AGG 0.559875 8.1:+33852416 None:intergenic
GGTCTTCGACTTTGACGACT+GGG 0.561876 8.1:-33852680 MS.gene49513:CDS
AGTCCGGTAAACTACTCAAT+CGG 0.563071 8.1:+33852803 None:intergenic
CATAGTTTCCAGCACAGGGC+AGG 0.563270 8.1:+33852082 None:intergenic
AGAGAGAGTTCTTGAAGGTG+GGG 0.563610 8.1:+33852502 None:intergenic
ACCATCACCGTTGAGAACTT+GGG 0.571797 8.1:-33851399 MS.gene49513:CDS
TCACTCAAGAGACTCAAACT+TGG 0.571944 8.1:-33852143 MS.gene49513:CDS
CTCTTGGAGCTGAAGGAAGG+TGG 0.572877 8.1:+33852011 None:intergenic
CCAAGTGAAATTGTCACTGG+TGG 0.576402 8.1:+33851980 None:intergenic
AGTCGTCAAAGTCGAAGACC+TGG 0.577295 8.1:+33852683 None:intergenic
ATCCCAAAATGTTTGAGCTG+TGG 0.581048 8.1:-33852543 MS.gene49513:CDS
TTATGACTCTCGTCTCTCAC+AGG 0.582125 8.1:-33852729 MS.gene49513:CDS
TTTGCACCTTAATTTGGAGA+CGG 0.584664 8.1:+33851128 None:intergenic
ACGGCGGAAAGCAGAAGAAG+AGG 0.584769 8.1:-33852827 MS.gene49513:CDS
GCAACAACCTCATTTCCCTC+CGG 0.586705 8.1:-33852423 MS.gene49513:intron
GTTGTTGCAGTTGATGAAGA+GGG 0.587431 8.1:+33852438 None:intergenic
TTTAGAACAGGGGCGTGAAG+TGG 0.587745 8.1:+33851678 None:intergenic
CAAATCATCGACGTTTAGAA+CGG 0.588372 8.1:+33852477 None:intergenic
TTGAGTGATGGAAAATGAAG+TGG 0.593301 8.1:+33852158 None:intergenic
TGGCGGAGTCAAGTTTGAAA+CGG 0.594179 8.1:-33852846 MS.gene49513:CDS
TATCCATAGTTTCCAGCACA+GGG 0.595183 8.1:+33852078 None:intergenic
CAATGTGAATATAAGTCAGG+TGG 0.596431 8.1:+33851339 None:intergenic
ATATGGCATAGAATGGAGTC+CGG 0.596950 8.1:+33852787 None:intergenic
GCAGAGAGAAAAGCAACTAC+CGG 0.598878 8.1:+33852104 None:intergenic
GACAAATTCACTTTCACGTG+AGG 0.601494 8.1:+33851869 None:intergenic
GACGAGAGTCATAATTGTGA+CGG 0.601855 8.1:+33852738 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.608111 8.1:+33851612 None:intergenic
TCAGAAACTGTTGTTGACAC+CGG 0.609286 8.1:+33851374 None:intergenic
GACGGAACTTACGAATGTTG+CGG 0.610282 8.1:+33852584 None:intergenic
TGACGGAGGTTCGAGTTGGG+AGG 0.611461 8.1:+33852755 None:intergenic
AAGATTGACTGACATACCAA+AGG 0.615806 8.1:-33851186 MS.gene49513:CDS
CCGGGTAATCACAGTTGAGA+CGG 0.616919 8.1:+33852566 None:intergenic
AAAGTTGCCAACGATGCCCA+TGG 0.622590 8.1:+33851926 None:intergenic
AGTCCAAGTGAAATTGTCAC+TGG 0.626020 8.1:+33851977 None:intergenic
GGTGGGGACCAGTGGCAGCA+CGG 0.627255 8.1:+33852518 None:intergenic
CCAACGATGCCCATGGCATG+GGG 0.628812 8.1:+33851933 None:intergenic
TCTCATAATTAAGAGCAGCA+AGG 0.629918 8.1:-33851553 MS.gene49513:intron
TGGCAACTTTCATAGTATGG+TGG 0.634902 8.1:-33851913 MS.gene49513:CDS
AATGTGAATATAAGTCAGGT+GGG 0.643217 8.1:+33851340 None:intergenic
ACCGGCTCCCAAGTTCTCAA+CGG 0.652084 8.1:+33851392 None:intergenic
GGTTGTTGCAGTTGATGAAG+AGG 0.656701 8.1:+33852437 None:intergenic
ACTCTGGATAATTTAGAACA+GGG 0.667989 8.1:+33851667 None:intergenic
TGACTCTCGTCTCTCACAGG+TGG 0.668779 8.1:-33852726 MS.gene49513:CDS
CTCTGGATAATTTAGAACAG+GGG 0.675675 8.1:+33851668 None:intergenic
CGGAGTCAAGTTTGAAACGG+CGG 0.679832 8.1:-33852843 MS.gene49513:CDS
GAGAGTCATAATTGTGACGG+AGG 0.689058 8.1:+33852741 None:intergenic
AGACCTGGAGATGCTCCCAG+AGG 0.734065 8.1:+33852698 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTAATTTAATCAATATT+TGG - chr8.1:33852468-33852487 MS.gene49513:CDS 10.0%
!!! TATTTTTTTATATATGTAGT+TGG - chr8.1:33852239-33852258 MS.gene49513:intron 10.0%
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.1:33852746-33852765 MS.gene49513:CDS 15.0%
!!! AAGGTGAAGTTTTATTTTTA+TGG - chr8.1:33852212-33852231 MS.gene49513:intron 20.0%
!!! ACAAATATATTTTTGAGTTG+TGG - chr8.1:33852532-33852551 MS.gene49513:CDS 20.0%
!!! TTTCATTGTTTTTGTTATCT+TGG + chr8.1:33852163-33852182 None:intergenic 20.0%
!! AAACTTTTGTCGTAAAAATG+AGG + chr8.1:33851331-33851350 None:intergenic 25.0%
!! AACAAATTTGAAACAAGTAC+CGG + chr8.1:33851582-33851601 None:intergenic 25.0%
!! TTCTTTATTTGTTTCAGTGT+TGG + chr8.1:33851730-33851749 None:intergenic 25.0%
!!! AAATACACTTGTTTTAATGG+TGG - chr8.1:33851623-33851642 MS.gene49513:CDS 25.0%
!!! CATTTGCTGAATATATTTTG+CGG - chr8.1:33852697-33852716 MS.gene49513:CDS 25.0%
!!! TCGAAATACACTTGTTTTAA+TGG - chr8.1:33851620-33851639 MS.gene49513:CDS 25.0%
AATGTGAATATAAGTCAGGT+GGG + chr8.1:33852646-33852665 None:intergenic 30.0%
ATTCACATTGAAGGATATCA+AGG - chr8.1:33852657-33852676 MS.gene49513:CDS 30.0%
CTGACTTATATTCACATTGA+AGG - chr8.1:33852648-33852667 MS.gene49513:CDS 30.0%
CTTCAATGTGAATATAAGTC+AGG + chr8.1:33852650-33852669 None:intergenic 30.0%
GAGAATGTTGAACTTTGATA+TGG + chr8.1:33851806-33851825 None:intergenic 30.0%
TGAAATAAATTGCGAAACTC+TGG + chr8.1:33852335-33852354 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG + chr8.1:33852418-33852437 None:intergenic 30.0%
! AACTCTGGATAATTTAGAAC+AGG + chr8.1:33852320-33852339 None:intergenic 30.0%
! ACTCTGGATAATTTAGAACA+GGG + chr8.1:33852319-33852338 None:intergenic 30.0%
!! TGTTTTTGTTATCTTGGAAG+AGG + chr8.1:33852157-33852176 None:intergenic 30.0%
!!! TATATTTTTGAGTTGTGGCA+CGG - chr8.1:33852537-33852556 MS.gene49513:CDS 30.0%
AAGATTGACTGACATACCAA+AGG - chr8.1:33852797-33852816 MS.gene49513:CDS 35.0%
AGATTGACTGACATACCAAA+GGG - chr8.1:33852798-33852817 MS.gene49513:CDS 35.0%
ATGTACACGATAACAAGTGA+CGG + chr8.1:33852278-33852297 None:intergenic 35.0%
CAAATCATCGACGTTTAGAA+CGG + chr8.1:33851509-33851528 None:intergenic 35.0%
CAATGTGAATATAAGTCAGG+TGG + chr8.1:33852647-33852666 None:intergenic 35.0%
CGTTCAAAGATATGTCTTCA+AGG + chr8.1:33851941-33851960 None:intergenic 35.0%
CTGCAGTATTAACAAAAGAC+AGG + chr8.1:33851765-33851784 None:intergenic 35.0%
GGGAACAAGAGATGAAATTA+TGG + chr8.1:33851698-33851717 None:intergenic 35.0%
TCTCATAATTAAGAGCAGCA+AGG - chr8.1:33852430-33852449 MS.gene49513:CDS 35.0%
! AACCACAGCTCAAACATTTT+GGG + chr8.1:33851445-33851464 None:intergenic 35.0%
! CTCTGGATAATTTAGAACAG+GGG + chr8.1:33852318-33852337 None:intergenic 35.0%
! GCTGAATATATTTTGCGGAA+CGG - chr8.1:33852702-33852721 MS.gene49513:CDS 35.0%
! TTCAGTGTTGGAAGTAGAAA+GGG + chr8.1:33851718-33851737 None:intergenic 35.0%
! TTGAGTGATGGAAAATGAAG+TGG + chr8.1:33851828-33851847 None:intergenic 35.0%
! TTTCAGTGTTGGAAGTAGAA+AGG + chr8.1:33851719-33851738 None:intergenic 35.0%
!! AAATTTGAAACAAGTACCGG+AGG + chr8.1:33851579-33851598 None:intergenic 35.0%
!! AATTTGAAACAAGTACCGGA+GGG + chr8.1:33851578-33851597 None:intergenic 35.0%
AGTCCAAGTGAAATTGTCAC+TGG + chr8.1:33852009-33852028 None:intergenic 40.0%
AGTCCGGTAAACTACTCAAT+CGG + chr8.1:33851183-33851202 None:intergenic 40.0%
AGTTTGAGTCTCTTGAGTGA+TGG + chr8.1:33851840-33851859 None:intergenic 40.0%
ATATCCATAGTTTCCAGCAC+AGG + chr8.1:33851909-33851928 None:intergenic 40.0%
ATATGGCATAGAATGGAGTC+CGG + chr8.1:33851199-33851218 None:intergenic 40.0%
ATCCCAAAATGTTTGAGCTG+TGG - chr8.1:33851440-33851459 MS.gene49513:intron 40.0%
ATGTCAAATGACGCGAAAGT+AGG + chr8.1:33852190-33852209 None:intergenic 40.0%
CGTTGGCAACTTTCATAGTA+TGG - chr8.1:33852067-33852086 MS.gene49513:CDS 40.0%
GACAAATTCACTTTCACGTG+AGG + chr8.1:33852117-33852136 None:intergenic 40.0%
GACGAGAGTCATAATTGTGA+CGG + chr8.1:33851248-33851267 None:intergenic 40.0%
GATATATATCCCCATGCCAT+GGG - chr8.1:33852041-33852060 MS.gene49513:CDS 40.0%
GGAAGAGGTTGTTGAGAATA+GGG + chr8.1:33852142-33852161 None:intergenic 40.0%
GTTCCTCCTACAAGTAACAA+TGG + chr8.1:33852566-33852585 None:intergenic 40.0%
TATCCATAGTTTCCAGCACA+GGG + chr8.1:33851908-33851927 None:intergenic 40.0%
TCACTCAAGAGACTCAAACT+TGG - chr8.1:33851840-33851859 MS.gene49513:CDS 40.0%
TCAGAAACTGTTGTTGACAC+CGG + chr8.1:33852612-33852631 None:intergenic 40.0%
TGATATATATCCCCATGCCA+TGG - chr8.1:33852040-33852059 MS.gene49513:CDS 40.0%
TGGAAGAGGTTGTTGAGAAT+AGG + chr8.1:33852143-33852162 None:intergenic 40.0%
TGGCAACTTTCATAGTATGG+TGG - chr8.1:33852070-33852089 MS.gene49513:CDS 40.0%
TGTTAATACTGCAGTCTGCA+TGG - chr8.1:33851771-33851790 MS.gene49513:intron 40.0%
TTCGCGTCATTTGACATCAA+AGG - chr8.1:33852193-33852212 MS.gene49513:CDS 40.0%
! CGTTCTAAACGTCGATGATT+TGG - chr8.1:33851507-33851526 MS.gene49513:intron 40.0%
! GAACCACAGCTCAAACATTT+TGG + chr8.1:33851446-33851465 None:intergenic 40.0%
! GGAGAGTATATGGCATAGAA+TGG + chr8.1:33851206-33851225 None:intergenic 40.0%
! TGTCCATTGTTACTTGTAGG+AGG - chr8.1:33852560-33852579 MS.gene49513:CDS 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr8.1:33852374-33852393 None:intergenic 40.0%
!! GTTGTTGCAGTTGATGAAGA+GGG + chr8.1:33851548-33851567 None:intergenic 40.0%
!!! AGCTCAAACATTTTGGGATC+CGG + chr8.1:33851439-33851458 None:intergenic 40.0%
AACCATCACCGTTGAGAACT+TGG - chr8.1:33852583-33852602 MS.gene49513:CDS 45.0%
ACCATCACCGTTGAGAACTT+GGG - chr8.1:33852584-33852603 MS.gene49513:CDS 45.0%
ACGGAACTTACGAATGTTGC+GGG + chr8.1:33851401-33851420 None:intergenic 45.0%
AGAGAGAGTTCTTGAAGGTG+GGG + chr8.1:33851484-33851503 None:intergenic 45.0%
CCAAGTGAAATTGTCACTGG+TGG + chr8.1:33852006-33852025 None:intergenic 45.0%
CCACCAGTGACAATTTCACT+TGG - chr8.1:33852003-33852022 MS.gene49513:CDS 45.0%
CTGCTTCAACTCGAATCTTC+TGG - chr8.1:33852373-33852392 MS.gene49513:intron 45.0%
GACGGAACTTACGAATGTTG+CGG + chr8.1:33851402-33851421 None:intergenic 45.0%
GAGAGAGAGTTCTTGAAGGT+GGG + chr8.1:33851485-33851504 None:intergenic 45.0%
GAGAGTCATAATTGTGACGG+AGG + chr8.1:33851245-33851264 None:intergenic 45.0%
GCAGAGAGAAAAGCAACTAC+CGG + chr8.1:33851882-33851901 None:intergenic 45.0%
GGACCGATTGAGTAGTTTAC+CGG - chr8.1:33851177-33851196 MS.gene49513:CDS 45.0%
TACGAATGTTGCGGGATCTA+CGG + chr8.1:33851393-33851412 None:intergenic 45.0%
TGAGAGAGAGTTCTTGAAGG+TGG + chr8.1:33851486-33851505 None:intergenic 45.0%
TGGCGGAGTCAAGTTTGAAA+CGG - chr8.1:33851137-33851156 MS.gene49513:CDS 45.0%
TGGTGTAGAGACTGTGTATC+CGG - chr8.1:33851860-33851879 MS.gene49513:CDS 45.0%
TTATGACTCTCGTCTCTCAC+AGG - chr8.1:33851254-33851273 MS.gene49513:CDS 45.0%
TTTCAAGCTCTTGGAGCTGA+AGG + chr8.1:33851982-33852001 None:intergenic 45.0%
! CGGTGTCCATTGTTACTTGT+AGG - chr8.1:33852557-33852576 MS.gene49513:CDS 45.0%
! TTGGGAGGAAGGAGAGTATA+TGG + chr8.1:33851216-33851235 None:intergenic 45.0%
!! ACTGGTGGATTTCAAGCTCT+TGG + chr8.1:33851991-33852010 None:intergenic 45.0%
!! AGTTGATGAAGAGGGAAGGA+GGG + chr8.1:33851540-33851559 None:intergenic 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr8.1:33852375-33852394 None:intergenic 45.0%
!! GGTTGTTGCAGTTGATGAAG+AGG + chr8.1:33851549-33851568 None:intergenic 45.0%
!! TTGCAGTTGATGAAGAGGGA+AGG + chr8.1:33851544-33851563 None:intergenic 45.0%
!!! GCTCAAACATTTTGGGATCC+GGG + chr8.1:33851438-33851457 None:intergenic 45.0%
AAAGTTGCCAACGATGCCCA+TGG + chr8.1:33852060-33852079 None:intergenic 50.0%
AAGCTCTTGGAGCTGAAGGA+AGG + chr8.1:33851978-33851997 None:intergenic 50.0%
AGGTCTTCGACTTTGACGAC+TGG - chr8.1:33851302-33851321 MS.gene49513:CDS 50.0%
AGTCGTCAAAGTCGAAGACC+TGG + chr8.1:33851303-33851322 None:intergenic 50.0%
CCGGGTAATCACAGTTGAGA+CGG + chr8.1:33851420-33851439 None:intergenic 50.0%
CCGTCTCAACTGTGATTACC+CGG - chr8.1:33851417-33851436 MS.gene49513:intron 50.0%
CGGTGAGAGAGAGTTCTTGA+AGG + chr8.1:33851489-33851508 None:intergenic 50.0%
GAGCTGAAGGAAGGTGGAAT+GGG + chr8.1:33851969-33851988 None:intergenic 50.0%
GCAACAACCTCATTTCCCTC+CGG - chr8.1:33851560-33851579 MS.gene49513:CDS 50.0%
GGTCTTCGACTTTGACGACT+GGG - chr8.1:33851303-33851322 MS.gene49513:CDS 50.0%
TCCCAAGTTCTCAACGGTGA+TGG + chr8.1:33852588-33852607 None:intergenic 50.0%
TCGCATGACACAGAACCCTT+TGG + chr8.1:33852816-33852835 None:intergenic 50.0%
! ATTGTGACGGAGGTTCGAGT+TGG + chr8.1:33851235-33851254 None:intergenic 50.0%
! CGGAGTCAAGTTTGAAACGG+CGG - chr8.1:33851140-33851159 MS.gene49513:CDS 50.0%
! TTGTGACGGAGGTTCGAGTT+GGG + chr8.1:33851234-33851253 None:intergenic 50.0%
! TTTAGAACAGGGGCGTGAAG+TGG + chr8.1:33852308-33852327 None:intergenic 50.0%
!! ACAAGTACCGGAGGGAAATG+AGG + chr8.1:33851570-33851589 None:intergenic 50.0%
!! CAGTTGATGAAGAGGGAAGG+AGG + chr8.1:33851541-33851560 None:intergenic 50.0%
ACCGTTGAGAACTTGGGAGC+CGG - chr8.1:33852590-33852609 MS.gene49513:CDS 55.0%
ACGGCGGAAAGCAGAAGAAG+AGG - chr8.1:33851156-33851175 MS.gene49513:CDS 55.0%
CATAGTTTCCAGCACAGGGC+AGG + chr8.1:33851904-33851923 None:intergenic 55.0%
CTCTTGGAGCTGAAGGAAGG+TGG + chr8.1:33851975-33851994 None:intergenic 55.0%
CTGCCCTGTGCTGGAAACTA+TGG - chr8.1:33851902-33851921 MS.gene49513:CDS 55.0%
GGAGCTGAAGGAAGGTGGAA+TGG + chr8.1:33851970-33851989 None:intergenic 55.0%
TGACTCTCGTCTCTCACAGG+TGG - chr8.1:33851257-33851276 MS.gene49513:CDS 55.0%
TTCTTGAAGGTGGGGACCAG+TGG + chr8.1:33851476-33851495 None:intergenic 55.0%
! ACCGGCTCCCAAGTTCTCAA+CGG + chr8.1:33852594-33852613 None:intergenic 55.0%
AGACCTGGAGATGCTCCCAG+AGG + chr8.1:33851288-33851307 None:intergenic 60.0%
CCAACGATGCCCATGGCATG+GGG + chr8.1:33852053-33852072 None:intergenic 60.0%
GCCAACGATGCCCATGGCAT+GGG + chr8.1:33852054-33852073 None:intergenic 60.0%
TCACAGGTGGCGACACCTCT+GGG - chr8.1:33851270-33851289 MS.gene49513:CDS 60.0%
TGCCAACGATGCCCATGGCA+TGG + chr8.1:33852055-33852074 None:intergenic 60.0%
!! ACACCTCTGGGAGCATCTCC+AGG - chr8.1:33851282-33851301 MS.gene49513:CDS 60.0%
!! GGAGGTTCGAGTTGGGAGGA+AGG + chr8.1:33851227-33851246 None:intergenic 60.0%
!! TGACGGAGGTTCGAGTTGGG+AGG + chr8.1:33851231-33851250 None:intergenic 60.0%
CTCACAGGTGGCGACACCTC+TGG - chr8.1:33851269-33851288 MS.gene49513:CDS 65.0%
CTGTGGTTCCGTGCTGCCAC+TGG - chr8.1:33851457-33851476 MS.gene49513:intron 65.0%
TCTCTCTGCCTGCCCTGTGC+TGG - chr8.1:33851893-33851912 MS.gene49513:CDS 65.0%
! CCCCATGCCATGGGCATCGT+TGG - chr8.1:33852050-33852069 MS.gene49513:CDS 65.0%
GGTGGGGACCAGTGGCAGCA+CGG + chr8.1:33851468-33851487 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 33851136 33852869 33851136 ID=MS.gene49513
chr8.1 mRNA 33851136 33852869 33851136 ID=MS.gene49513.t1;Parent=MS.gene49513
chr8.1 exon 33852424 33852869 33852424 ID=MS.gene49513.t1.exon1;Parent=MS.gene49513.t1
chr8.1 CDS 33852424 33852869 33852424 ID=cds.MS.gene49513.t1;Parent=MS.gene49513.t1
chr8.1 exon 33851791 33852220 33851791 ID=MS.gene49513.t1.exon2;Parent=MS.gene49513.t1
chr8.1 CDS 33851791 33852220 33851791 ID=cds.MS.gene49513.t1;Parent=MS.gene49513.t1
chr8.1 exon 33851554 33851703 33851554 ID=MS.gene49513.t1.exon3;Parent=MS.gene49513.t1
chr8.1 CDS 33851554 33851703 33851554 ID=cds.MS.gene49513.t1;Parent=MS.gene49513.t1
chr8.1 exon 33851136 33851426 33851136 ID=MS.gene49513.t1.exon4;Parent=MS.gene49513.t1
chr8.1 CDS 33851136 33851426 33851136 ID=cds.MS.gene49513.t1;Parent=MS.gene49513.t1
Gene Sequence

>MS.gene49513

ATGGCGGAGTCAAGTTTGAAACGGCGGAAAGCAGAAGAAGAGGACCGATTGAGTAGTTTACCGGACTCCATTCTATGCCATATACTCTCCTTCCTCCCAACTCGAACCTCCGTCACAATTATGACTCTCGTCTCTCACAGGTGGCGACACCTCTGGGAGCATCTCCAGGTCTTCGACTTTGACGACTGGGATCCTCATTTTTACGACAAAAGTTTCGAAAAGTTTGCATCGTTCGTCAATGCTGTGCTCACTCTCCGTAGATCCCGCAACATTCGTAAGTTCCGTCTCAACTGTGATTACCCGGATCCCAAAATGTTTGAGCTGTGGTTCCGTGCTGCCACTGGTCCCCACCTTCAAGAACTCTCTCTCACCGTTCTAAACGTCGATGATTTGGTTAAACTCCCTCCTTCCCTCTTCATCAACTGCAACAACCTCATTTCCCTCCGGTACTTGTTTCAAATTTGTTTTTATTTCTATGAAACTGTCGAAATACACTTGTTTTAATGGTGGAAATGAAATTTGTTATCGATTTTACATATTATTATATCGATGCTCACTTCCATAATTTCATCTCTTGTTCCCTTTCTACTTCCAACACTGAAACAAATAAAGAATGTTATATATAACCTGTCTTTTGTTAATACTGCAGTCTGCATGGTGTACAAGTCCATATCAAAGTTCAACATTCTCCACTTCATTTTCCATCACTCAAGAGACTCAAACTTGGTGTAGAGACTGTGTATCCGGTAGTTGCTTTTCTCTCTGCCTGCCCTGTGCTGGAAACTATGGATATTAACTTTTTCCTTGAAGACATATCTTTGAACGAAGTTCCCATTCCACCTTCCTTCAGCTCCAAGAGCTTGAAATCCACCAGTGACAATTTCACTTGGACTCACTTTAAGTTTGATATATATCCCCATGCCATGGGCATCGTTGGCAACTTTCATAGTATGGTGGAAGCATTTCTCGATGTCTTTTCCTCACGTGAAAGTGAATTTGTCGACCCTATTCTCAACAACCTCTTCCAAGATAACAAAAACAATGAAATAAACCTACTTTCGCGTCATTTGACATCAAAGGTGAAGTTTTATTTTTATGGTTTGTATTTTTTTATATATGTAGTTGGTACTAATACTGCGCCGTCACTTGTTATCGTGTACATGCAGTTGCCACTTCACGCCCCTGTTCTAAATTATCCAGAGTTTCGCAATTTATTTCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGGTCGACGTGCTTGAAAAATGCCATATGCTTCAAGTTCTCATAATTAAGAGCAGCAAGGTTTGTTGACTTCTCAAGTTTAATTTAATCAATATTTGGTATGTCTATATGTGCATGAATGTATGAATCTATTTGTGCATACAAATATATTTTTGAGTTGTGGCACGGTGTCCATTGTTACTTGTAGGAGGAACCATCACCGTTGAGAACTTGGGAGCCGGTGTCAACAACAGTTTCTGAATGTCTCAAATCCCACCTGACTTATATTCACATTGAAGGATATCAAGGATTTGAAGATGAGCTGACATTTGCTGAATATATTTTGCGGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACAAAACAAACAAGTATTGTTCTCTCAAAAGATTGACTGACATACCAAAGGGTTCTGTGTCATGCGAACTTAAATTTGACCCAGCTCCGTCTCCAAATTAA

Protein sequence

>MS.gene49513.t1

MAESSLKRRKAEEEDRLSSLPDSILCHILSFLPTRTSVTIMTLVSHRWRHLWEHLQVFDFDDWDPHFYDKSFEKFASFVNAVLTLRRSRNIRKFRLNCDYPDPKMFELWFRAATGPHLQELSLTVLNVDDLVKLPPSLFINCNNLISLRLHGVQVHIKVQHSPLHFPSLKRLKLGVETVYPVVAFLSACPVLETMDINFFLEDISLNEVPIPPSFSSKSLKSTSDNFTWTHFKFDIYPHAMGIVGNFHSMVEAFLDVFSSRESEFVDPILNNLFQDNKNNEINLLSRHLTSKLPLHAPVLNYPEFRNLFHLKFILPCFNSNLLVDVLEKCHMLQVLIIKSSKEEPSPLRTWEPVSTTVSECLKSHLTYIHIEGYQGFEDELTFAEYILRNGLVLKTMLIFVDISMDKTNKYCSLKRLTDIPKGSVSCELKFDPAPSPN