AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34736


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34736.t1 MTR_8g468810 83.298 467 73 3 1 466 1 463 0.0 776
MS.gene34736.t1 MTR_8g468810 82.933 375 59 3 1 374 1 371 0.0 616
MS.gene34736.t1 MTR_8g058970 63.299 485 151 4 1 466 1 477 0.0 572
MS.gene34736.t1 MTR_8g468810 82.704 318 51 2 1 318 1 314 0.0 521
MS.gene34736.t1 MTR_8g468810 82.704 318 51 2 1 318 1 314 0.0 521
MS.gene34736.t1 MTR_8g468810 82.704 318 51 2 1 318 1 314 0.0 520
MS.gene34736.t1 MTR_2g083840 55.485 474 186 9 1 466 1 457 5.26e-162 466
MS.gene34736.t1 MTR_4g032730 49.072 485 197 12 11 465 2 466 5.52e-136 400
MS.gene34736.t1 MTR_8g062270 50.220 454 195 11 27 465 16 453 8.24e-134 394
MS.gene34736.t1 MTR_8g468760 50.641 468 166 14 12 465 2 418 1.49e-127 377
MS.gene34736.t1 MTR_5g092960 50.437 458 193 13 27 465 19 461 5.11e-121 362
MS.gene34736.t1 MTR_8g467800 48.950 476 204 14 5 466 3 453 1.13e-120 360
MS.gene34736.t1 MTR_8g468840 48.775 449 207 11 26 464 13 448 7.26e-120 358
MS.gene34736.t1 MTR_8g014260 44.654 477 224 17 2 466 3 451 1.34e-108 329
MS.gene34736.t1 MTR_8g058965 41.649 473 246 10 12 470 4 460 3.99e-97 300
MS.gene34736.t1 MTR_8g445780 44.893 421 195 12 1 416 1 389 1.69e-93 288
MS.gene34736.t1 MTR_8g469020 40.517 464 241 13 27 470 7 455 2.56e-92 288
MS.gene34736.t1 MTR_8g070950 39.630 487 228 16 1 470 1 438 4.12e-91 284
MS.gene34736.t1 MTR_5g092960 47.790 362 166 10 27 374 19 371 6.53e-86 269
MS.gene34736.t1 MTR_4g050250 42.032 433 207 12 2 408 4 418 7.36e-85 267
MS.gene34736.t1 MTR_8g062010 41.138 457 231 16 20 466 2 430 2.27e-84 266
MS.gene34736.t1 MTR_8g062080 39.035 456 239 13 22 466 18 445 7.60e-82 260
MS.gene34736.t1 MTR_8g014160 36.383 470 226 12 6 466 20 425 1.11e-76 246
MS.gene34736.t1 MTR_8g467800 50.962 312 135 8 5 311 3 301 1.51e-75 241
MS.gene34736.t1 MTR_8g062310 37.838 444 232 14 27 466 25 428 8.61e-73 236
MS.gene34736.t1 MTR_8g062300 36.089 496 261 15 5 466 4 477 9.28e-71 232
MS.gene34736.t1 MTR_8g467790 36.869 396 190 14 27 410 148 495 2.31e-59 203
MS.gene34736.t1 MTR_4g024710 41.528 301 162 8 169 466 58 347 2.62e-56 191
MS.gene34736.t1 MTR_8g077460 36.856 388 204 13 20 391 2 364 2.40e-49 173
MS.gene34736.t1 MTR_8g077460 35.075 268 145 11 207 466 129 375 1.17e-32 128
MS.gene34736.t1 MTR_4g024745 40.647 278 154 7 167 441 10 279 1.22e-46 163
MS.gene34736.t1 MTR_5g021550 52.601 173 66 6 1 168 1 162 1.42e-43 151
MS.gene34736.t1 MTR_8g014210 42.149 242 128 6 226 466 1 231 3.45e-43 152
MS.gene34736.t1 MTR_1g041245 29.801 453 228 14 27 466 11 386 1.68e-35 136
MS.gene34736.t1 MTR_8g014290 45.342 161 76 6 19 169 2 160 3.75e-34 126
MS.gene34736.t1 MTR_4g024720 40.741 189 78 8 1 168 1 176 9.69e-31 118
MS.gene34736.t1 MTR_5g080710 30.090 442 271 18 27 458 33 446 5.53e-29 119
MS.gene34736.t1 MTR_2g086020 30.969 423 183 16 53 470 1 319 1.36e-28 115
MS.gene34736.t1 MTR_5g084070 29.224 438 273 17 27 458 13 419 1.41e-28 117
MS.gene34736.t1 MTR_3g107120 29.258 458 239 17 20 463 2 388 5.03e-25 107
MS.gene34736.t1 MTR_8g014220 35.484 217 76 8 2 213 3 160 8.92e-25 100
MS.gene34736.t1 MTR_7g098510 26.726 449 253 13 23 466 14 391 1.98e-24 105
MS.gene34736.t1 MTR_4g056040 28.348 448 257 16 22 423 4 433 2.22e-24 106
MS.gene34736.t1 MTR_3g107100 26.923 468 246 17 23 468 7 400 5.11e-24 103
MS.gene34736.t1 MTR_3g109982 29.622 476 275 18 26 459 12 469 6.68e-23 102
MS.gene34736.t1 MTR_7g115270 24.890 454 262 14 25 463 10 399 4.63e-22 98.2
MS.gene34736.t1 MTR_4g056020 28.506 435 262 19 22 432 4 413 1.04e-21 97.8
MS.gene34736.t1 MTR_7g033915 27.753 454 217 18 25 465 9 364 2.78e-21 95.5
MS.gene34736.t1 MTR_4g056070 27.790 457 244 19 22 416 4 436 2.78e-21 96.3
MS.gene34736.t1 MTR_3g108150 28.000 450 241 19 25 465 11 386 4.13e-21 95.1
MS.gene34736.t1 MTR_7g056430 25.778 450 233 13 20 460 2 359 6.79e-21 96.7
MS.gene34736.t1 MTR_7g056420 25.778 450 233 13 20 460 2 359 7.76e-21 96.7
MS.gene34736.t1 MTR_3g087260 28.016 489 260 18 26 465 11 456 9.75e-21 94.7
MS.gene34736.t1 MTR_4g055990 27.021 470 263 17 22 431 4 453 2.26e-20 94.0
MS.gene34736.t1 MTR_4g055990 27.021 470 263 17 22 431 4 453 2.32e-20 94.0
MS.gene34736.t1 MTR_4g056030 28.140 430 267 16 22 431 4 411 2.64e-20 93.6
MS.gene34736.t1 MTR_3g071850 27.655 452 247 20 20 458 17 401 3.21e-20 94.4
MS.gene34736.t1 MTR_7g098570 26.846 447 245 16 27 465 20 392 8.32e-20 92.4
MS.gene34736.t1 MTR_4g113810 34.104 173 97 6 109 271 1 166 9.97e-20 86.7
MS.gene34736.t1 MTR_7g056447 35.784 204 103 10 20 215 2 185 2.35e-19 88.6
MS.gene34736.t1 MTR_7g032380 36.041 197 106 8 27 218 11 192 3.05e-19 89.4
MS.gene34736.t1 MTR_7g026500 24.895 478 262 15 1 465 1 394 3.83e-19 89.7
MS.gene34736.t1 MTR_2g008320 27.074 458 248 17 20 466 45 427 6.15e-19 89.4
MS.gene34736.t1 MTR_3g023630 25.624 441 245 16 24 459 5 367 6.23e-19 88.6
MS.gene34736.t1 MTR_1089s0010 25.771 454 241 20 27 466 8 379 1.38e-18 87.8
MS.gene34736.t1 MTR_3g108560 26.164 451 241 16 26 465 19 388 1.08e-17 85.1
MS.gene34736.t1 MTR_3g082890 26.124 467 239 17 27 466 97 484 2.07e-17 85.1
MS.gene34736.t1 MTR_1g038710 25.882 425 279 13 27 431 19 427 2.11e-17 84.7
MS.gene34736.t1 MTR_4g055580 26.866 469 269 18 17 431 90 538 4.46e-17 84.3
MS.gene34736.t1 MTR_3g107160 29.665 209 129 5 19 221 2 198 6.41e-17 82.8
MS.gene34736.t1 MTR_6g011460 26.471 476 252 18 7 466 28 421 6.89e-17 83.2
MS.gene34736.t1 MTR_5g008920 37.073 205 99 11 24 218 6 190 2.10e-16 81.3
MS.gene34736.t1 MTR_2g008310 27.434 452 234 20 27 466 2 371 3.75e-16 80.5
MS.gene34736.t1 MTR_8g085430 33.816 207 112 7 23 218 7 199 4.89e-16 79.3
MS.gene34736.t1 MTR_7g088260 23.937 447 270 12 21 466 85 462 7.55e-16 80.1
MS.gene34736.t1 MTR_2g007500 34.135 208 104 7 20 220 7 188 8.53e-16 79.0
MS.gene34736.t1 MTR_6g045333 25.328 458 264 17 20 465 54 445 1.11e-15 79.3
MS.gene34736.t1 MTR_2g007400 26.013 469 251 20 22 466 7 403 2.63e-15 78.2
MS.gene34736.t1 MTR_8g014230 52.000 75 32 2 382 456 25 95 2.72e-15 72.0
MS.gene34736.t1 MTR_3g040700 29.817 218 134 6 7 218 22 226 3.66e-15 77.8
MS.gene34736.t1 MTR_6g022500 34.653 202 115 8 21 218 95 283 5.92e-15 77.4
MS.gene34736.t1 MTR_4g024770 50.685 73 24 2 2 74 10 70 1.72e-14 68.9
MS.gene34736.t1 MTR_3g099830 29.952 207 110 8 21 220 6 184 3.17e-14 74.3
MS.gene34736.t1 MTR_3g036250 31.980 197 116 5 27 218 5 188 4.82e-14 73.9
MS.gene34736.t1 MTR_5g008950 31.100 209 117 9 29 232 1 187 5.86e-14 73.6
MS.gene34736.t1 MTR_2g072720 24.943 441 286 15 14 432 26 443 6.12e-14 74.3
MS.gene34736.t1 MTR_7g055943 25.597 461 251 21 23 466 36 421 7.71e-14 73.6
MS.gene34736.t1 MTR_4g093690 32.995 197 109 7 27 215 18 199 9.89e-14 71.6
MS.gene34736.t1 MTR_4g098590 26.353 425 220 16 29 431 1 354 1.41e-13 72.4
MS.gene34736.t1 MTR_5g073420 23.608 449 257 15 27 467 11 381 2.67e-13 71.6
MS.gene34736.t1 MTR_7g032370 33.880 183 104 7 39 218 2 170 4.97e-13 70.5
MS.gene34736.t1 MTR_7g033990 32.227 211 116 8 22 222 6 199 5.11e-13 71.2
MS.gene34736.t1 MTR_5g083890 32.683 205 118 8 26 215 5 204 1.27e-12 70.1
MS.gene34736.t1 MTR_7g034110 31.760 233 122 12 21 240 5 213 1.51e-12 69.3
MS.gene34736.t1 MTR_3g048290 26.207 435 262 18 18 420 14 421 1.97e-12 69.3
MS.gene34736.t1 MTR_1g107385 27.601 471 237 21 21 463 26 420 7.82e-12 67.4
MS.gene34736.t1 MTR_5g058100 33.168 202 123 6 21 221 3 193 7.93e-12 67.0
MS.gene34736.t1 MTR_7g034115 32.212 208 113 9 27 225 11 199 1.14e-11 66.6
MS.gene34736.t1 MTR_2g072530 22.340 470 305 19 26 468 12 448 1.42e-11 66.6
MS.gene34736.t1 MTR_4g080787 24.773 440 269 17 27 431 19 431 1.80e-11 66.6
MS.gene34736.t1 MTR_0543s0010 26.119 268 151 9 222 465 205 449 2.31e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34736.t1 AT4G26340 29.759 457 265 17 27 466 2 419 1.29e-35 137
MS.gene34736.t1 AT1G16930 28.395 486 255 22 25 466 13 449 1.18e-33 132
MS.gene34736.t1 AT1G16930 28.395 486 255 22 25 466 13 449 1.18e-33 132
MS.gene34736.t1 AT1G16930 28.395 486 255 22 25 466 13 449 1.18e-33 132
MS.gene34736.t1 AT5G56420 27.056 462 276 17 24 466 3 422 1.88e-30 122
MS.gene34736.t1 AT5G56420 27.056 462 276 17 24 466 3 422 1.88e-30 122
MS.gene34736.t1 AT5G56420 27.056 462 276 17 24 466 3 422 1.88e-30 122
MS.gene34736.t1 AT1G78750 27.651 481 290 18 11 463 5 455 2.89e-30 122
MS.gene34736.t1 AT1G78750 27.651 481 290 18 11 463 5 455 2.89e-30 122
MS.gene34736.t1 AT5G56370 27.742 465 264 20 27 465 2 420 1.36e-28 117
MS.gene34736.t1 AT5G56370 27.742 465 264 20 27 465 2 420 1.36e-28 117
MS.gene34736.t1 AT1G78760 27.564 468 271 24 24 463 13 440 9.43e-28 115
MS.gene34736.t1 AT5G53840 26.964 471 291 20 17 469 8 443 3.51e-27 114
MS.gene34736.t1 AT4G10400 26.503 449 278 17 27 465 2 408 1.59e-26 111
MS.gene34736.t1 AT4G10400 26.503 449 278 17 27 465 2 408 1.59e-26 111
MS.gene34736.t1 AT4G10400 26.503 449 278 17 27 465 2 408 1.59e-26 111
MS.gene34736.t1 AT5G22730 27.143 490 287 21 7 463 11 463 2.97e-25 108
MS.gene34736.t1 AT5G22730 27.143 490 287 21 7 463 11 463 2.97e-25 108
MS.gene34736.t1 AT3G50710 26.898 461 281 17 27 466 2 427 3.67e-25 107
MS.gene34736.t1 AT1G66310 27.966 472 280 21 14 463 6 439 5.88e-25 107
MS.gene34736.t1 AT1G80470 25.478 471 284 21 24 469 12 440 6.03e-25 107
MS.gene34736.t1 AT5G56440 26.840 462 281 18 27 465 2 429 8.57e-25 106
MS.gene34736.t1 AT1G69630 27.234 470 270 21 27 463 18 448 1.03e-24 106
MS.gene34736.t1 AT1G32375 26.696 457 282 18 27 466 2 422 1.17e-24 106
MS.gene34736.t1 AT1G32375 26.696 457 282 18 27 466 2 422 1.17e-24 106
MS.gene34736.t1 AT5G38590 27.446 419 253 17 27 431 2 383 1.65e-24 105
MS.gene34736.t1 AT1G55660 26.374 455 303 16 27 465 53 491 2.67e-24 105
MS.gene34736.t1 AT2G26030 27.484 473 273 23 25 463 2 438 3.28e-24 105
MS.gene34736.t1 AT2G26030 27.484 473 273 23 25 463 2 438 3.28e-24 105
MS.gene34736.t1 AT5G22720 27.327 505 286 25 1 465 1 464 5.33e-24 104
MS.gene34736.t1 AT3G52680 29.221 462 272 21 26 466 20 447 1.40e-23 103
MS.gene34736.t1 AT4G00160 29.158 463 273 20 26 466 15 444 2.10e-23 102
MS.gene34736.t1 AT5G60610 26.636 428 250 17 27 432 2 387 4.22e-23 101
MS.gene34736.t1 AT5G60610 26.636 428 250 17 27 432 2 387 4.22e-23 101
MS.gene34736.t1 AT2G04230 28.103 427 260 15 25 432 11 409 9.89e-23 100
MS.gene34736.t1 AT1G51370 26.915 457 273 20 26 463 18 432 1.29e-22 100
MS.gene34736.t1 AT5G38570 26.058 449 251 15 27 467 2 377 1.48e-22 99.4
MS.gene34736.t1 AT2G26860 27.635 427 257 18 27 432 2 397 2.54e-22 99.4
MS.gene34736.t1 AT2G26860 27.635 427 257 18 27 432 2 397 2.54e-22 99.4
MS.gene34736.t1 AT5G62970 26.964 471 288 19 27 465 2 448 3.99e-22 99.0
MS.gene34736.t1 AT1G06630 28.191 376 212 13 26 374 11 355 6.93e-22 97.1
MS.gene34736.t1 AT1G06630 28.191 376 212 13 26 374 11 355 6.93e-22 97.1
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 11 353 1.14e-21 97.8
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 11 353 1.15e-21 97.1
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 11 353 1.15e-21 97.1
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 11 353 1.15e-21 97.1
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 11 353 1.15e-21 97.1
MS.gene34736.t1 AT4G00315 26.593 455 302 16 27 465 2 440 1.27e-21 97.4
MS.gene34736.t1 AT1G06630 28.075 374 211 13 26 372 20 362 1.44e-21 97.1
MS.gene34736.t1 AT1G06630 30.164 305 187 10 26 318 11 301 3.43e-21 94.4
MS.gene34736.t1 AT1G13780 27.752 436 263 18 27 432 10 423 4.81e-21 95.9
MS.gene34736.t1 AT5G56820 27.883 477 264 23 19 469 7 429 5.92e-21 95.5
MS.gene34736.t1 AT5G38590 28.814 295 179 12 27 313 2 273 9.12e-21 92.8
MS.gene34736.t1 AT5G22670 28.964 473 262 24 24 463 8 439 1.47e-20 94.4
MS.gene34736.t1 AT4G13985 25.102 490 292 19 12 463 4 456 1.75e-20 94.4
MS.gene34736.t1 AT4G14096 29.180 305 191 10 26 317 7 299 1.76e-20 94.4
MS.gene34736.t1 AT4G14096 29.180 305 191 10 26 317 7 299 1.76e-20 94.4
MS.gene34736.t1 AT1G05080 27.074 458 285 18 26 465 12 438 5.23e-20 92.8
MS.gene34736.t1 AT1G55660 28.333 300 198 9 27 321 53 340 5.51e-20 91.7
MS.gene34736.t1 AT5G56370 29.693 293 174 12 27 313 2 268 7.76e-20 90.5
MS.gene34736.t1 AT5G53635 25.163 461 284 18 29 465 2 425 9.11e-20 91.7
MS.gene34736.t1 AT5G56400 25.591 465 283 17 25 466 31 455 1.06e-19 91.7
MS.gene34736.t1 AT5G27750 26.638 473 294 20 27 466 5 457 1.57e-19 91.3
MS.gene34736.t1 AT5G56810 27.521 476 279 22 14 465 2 435 1.58e-19 91.3
MS.gene34736.t1 AT5G56380 27.409 467 283 21 27 466 2 439 1.71e-19 91.3
MS.gene34736.t1 AT5G56380 27.409 467 283 21 27 466 2 439 1.71e-19 91.3
MS.gene34736.t1 AT4G14103 29.022 317 189 11 23 317 4 306 2.51e-19 90.1
MS.gene34736.t1 AT4G14103 29.022 317 189 11 23 317 4 306 2.51e-19 90.1
MS.gene34736.t1 AT4G14103 29.206 315 187 11 25 317 6 306 2.87e-19 90.5
MS.gene34736.t1 AT5G18780 27.176 471 284 21 18 463 2 438 3.77e-19 90.1
MS.gene34736.t1 AT5G18780 27.176 471 284 21 18 463 2 438 3.77e-19 90.1
MS.gene34736.t1 AT3G58940 25.870 460 259 19 27 449 2 416 4.97e-19 90.5
MS.gene34736.t1 AT3G58940 25.870 460 259 19 27 449 2 416 4.97e-19 90.5
MS.gene34736.t1 AT3G49030 25.221 452 275 17 26 468 20 417 1.65e-18 87.8
MS.gene34736.t1 AT5G22660 26.471 476 286 20 17 463 3 443 2.37e-18 87.8
MS.gene34736.t1 AT4G13965 28.097 452 273 20 25 463 8 420 3.82e-17 84.0
MS.gene34736.t1 AT3G59200 28.058 278 177 12 25 291 5 270 5.60e-17 82.8
MS.gene34736.t1 AT3G54910 26.234 385 250 13 88 466 17 373 6.22e-17 82.8
MS.gene34736.t1 AT3G54910 26.234 385 250 13 88 466 17 373 6.22e-17 82.8
MS.gene34736.t1 AT3G54910 26.234 385 250 13 88 466 17 373 6.22e-17 82.8
MS.gene34736.t1 AT4G22280 28.307 378 226 16 27 388 2 350 6.89e-17 82.8
MS.gene34736.t1 AT4G15060 27.960 397 226 20 27 401 26 384 7.21e-17 83.2
MS.gene34736.t1 AT4G10420 25.145 346 224 14 129 465 2 321 8.10e-17 81.6
MS.gene34736.t1 AT3G59200 28.058 278 177 12 25 291 5 270 8.70e-17 83.2
MS.gene34736.t1 AT5G56700 26.750 400 235 19 63 446 1 358 9.58e-17 82.0
MS.gene34736.t1 AT5G41840 26.097 433 244 17 27 401 14 428 9.92e-17 83.2
MS.gene34736.t1 AT5G56410 24.829 439 268 16 27 432 2 411 1.48e-16 82.4
MS.gene34736.t1 AT3G26930 26.360 478 271 23 24 469 18 446 1.54e-16 82.0
MS.gene34736.t1 AT5G22730 27.735 393 227 18 7 370 11 375 2.47e-16 81.3
MS.gene34736.t1 AT5G56390 25.821 457 287 16 27 465 2 424 2.62e-16 81.3
MS.gene34736.t1 AT3G49480 25.503 447 269 20 26 441 11 424 2.69e-16 81.3
MS.gene34736.t1 AT4G15060 29.276 304 175 15 27 311 172 454 3.51e-16 81.3
MS.gene34736.t1 AT1G51370 26.142 394 241 17 26 404 18 376 3.56e-16 80.9
MS.gene34736.t1 AT5G22610 24.894 470 270 23 26 464 17 434 5.78e-16 80.5
MS.gene34736.t1 AT4G22280 30.877 285 168 11 27 301 2 267 9.34e-16 78.6
MS.gene34736.t1 AT4G09920 28.667 300 183 15 27 316 2 280 1.10e-15 78.2
MS.gene34736.t1 AT4G09920 28.667 300 183 15 27 316 2 280 1.10e-15 78.2
MS.gene34736.t1 AT5G22610 24.948 485 281 22 26 464 17 464 1.13e-15 79.7
MS.gene34736.t1 AT3G52680 30.943 265 159 11 10 265 4 253 1.47e-15 78.6
MS.gene34736.t1 AT5G56560 22.174 460 294 14 26 466 4 418 3.81e-15 77.8
MS.gene34736.t1 AT1G60410 24.826 431 271 17 24 433 7 405 4.21e-15 77.4
MS.gene34736.t1 AT4G09920 28.523 298 182 15 27 314 2 278 5.56e-15 75.9
MS.gene34736.t1 AT4G09920 28.523 298 182 15 27 314 2 278 5.56e-15 75.9
MS.gene34736.t1 AT4G09920 28.523 298 182 15 27 314 2 278 5.56e-15 75.9
MS.gene34736.t1 AT1G13780 27.879 330 200 13 27 330 10 327 7.66e-15 75.9
MS.gene34736.t1 AT3G26922 30.063 316 170 15 25 317 12 299 1.60e-14 74.7
MS.gene34736.t1 AT3G26922 30.063 316 170 15 25 317 12 299 1.60e-14 74.7
MS.gene34736.t1 AT5G53640 27.907 215 129 8 8 217 3 196 1.74e-14 73.2
MS.gene34736.t1 AT3G26920 27.221 349 216 15 130 465 16 339 2.38e-14 74.7
MS.gene34736.t1 AT3G26920 27.221 349 216 15 130 465 16 339 2.38e-14 74.7
MS.gene34736.t1 AT5G18780 33.333 264 135 14 18 264 2 241 4.35e-14 74.3
MS.gene34736.t1 AT5G18780 33.333 264 135 14 18 264 2 241 4.35e-14 74.3
MS.gene34736.t1 AT5G44980 26.402 428 264 21 25 429 2 401 4.82e-14 74.3
MS.gene34736.t1 AT5G44980 26.402 428 264 21 25 429 2 401 4.82e-14 74.3
MS.gene34736.t1 AT3G44810 30.769 247 145 8 29 260 9 244 5.78e-14 74.3
MS.gene34736.t1 AT5G41830 26.053 380 229 13 26 371 12 373 1.91e-13 72.8
MS.gene34736.t1 AT3G59190 26.963 382 227 19 23 371 8 370 2.33e-13 72.4
MS.gene34736.t1 AT5G50270 25.734 443 261 17 27 441 2 404 2.70e-13 72.0
MS.gene34736.t1 AT3G59190 28.516 256 158 11 23 264 8 252 3.81e-13 71.2
MS.gene34736.t1 AT3G62430 25.745 470 283 20 27 465 2 436 6.77e-13 70.9
MS.gene34736.t1 AT2G29930 24.435 487 282 21 26 465 11 458 1.24e-12 70.1
MS.gene34736.t1 AT2G29930 24.435 487 282 21 26 465 11 458 1.24e-12 70.1
MS.gene34736.t1 AT4G00320 25.065 383 235 14 23 371 9 373 1.51e-12 70.1
MS.gene34736.t1 AT2G26030 26.703 367 215 19 129 463 21 365 1.59e-12 69.3
MS.gene34736.t1 AT5G38390 26.457 446 246 19 27 429 2 408 2.80e-12 68.9
MS.gene34736.t1 AT5G35995 24.746 493 278 22 25 465 3 454 3.03e-12 68.9
MS.gene34736.t1 AT5G35995 24.746 493 278 22 25 465 3 454 3.03e-12 68.9
MS.gene34736.t1 AT3G59170 29.856 278 153 10 25 265 5 277 3.38e-12 68.9
MS.gene34736.t1 AT5G38590 27.313 227 144 8 93 313 27 238 3.44e-12 67.0
MS.gene34736.t1 AT3G59210 29.960 247 157 9 26 264 6 244 4.90e-12 68.2
MS.gene34736.t1 AT3G59210 29.960 247 157 9 26 264 6 244 4.90e-12 68.2
MS.gene34736.t1 AT3G59210 29.960 247 157 9 26 264 6 244 4.90e-12 68.2
MS.gene34736.t1 AT3G59210 29.960 247 157 9 26 264 6 244 4.90e-12 68.2
MS.gene34736.t1 AT3G59210 29.960 247 157 9 26 264 6 244 4.90e-12 68.2
MS.gene34736.t1 AT5G56700 29.204 226 138 11 63 282 1 210 5.38e-12 66.6
MS.gene34736.t1 AT5G44960 24.130 431 247 20 27 429 5 383 1.10e-11 67.0
MS.gene34736.t1 AT5G27750 26.738 374 230 16 27 370 5 364 1.24e-11 66.6
MS.gene34736.t1 AT1G56610 30.112 269 151 13 20 268 3 254 1.53e-11 66.6
MS.gene34736.t1 AT3G42770 25.980 408 255 15 29 418 1 379 1.80e-11 66.6
MS.gene34736.t1 AT1G56610 30.112 269 151 13 20 268 66 317 2.16e-11 66.6
MS.gene34736.t1 AT1G58310 28.231 294 172 12 25 291 6 287 2.84e-11 65.9
MS.gene34736.t1 AT5G56810 28.302 318 180 15 14 304 2 298 3.94e-11 64.3
MS.gene34736.t1 AT1G60400 25.846 325 197 15 24 328 11 311 4.45e-11 65.1
MS.gene34736.t1 AT5G18770 25.460 326 203 11 9 317 14 316 5.55e-11 64.7

Find 94 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCCAATCTTAGAAATTT+TGG 0.135666 8.1:+44950818 MS.gene34736:CDS
TTGACCTATATTCACTTTAA+AGG 0.147428 8.1:+44951576 MS.gene34736:CDS
TTGAAGACAATGCTTATTTC+TGG 0.178189 8.1:+44951660 MS.gene34736:CDS
GTTAAATTTGACCAAGTTCT+AGG 0.208686 8.1:+44951771 MS.gene34736:CDS
TCGAAAATTGTCTGAGAAAA+TGG 0.210666 8.1:-44951719 None:intergenic
CTTGCAGGAGAGTGGGTAAA+AGG 0.305542 8.1:-44951076 None:intergenic
AGTTCCAAAATTTCTAAGAT+TGG 0.318329 8.1:-44950822 None:intergenic
AAGTGGGATACAAGACAATT+AGG 0.370823 8.1:-44951555 None:intergenic
TGGTGAGATCTTTGTGGAAT+TGG 0.375275 8.1:+44950701 MS.gene34736:CDS
AGAGGAGGTTAGTGCATGAT+AGG 0.377152 8.1:-44949944 None:intergenic
ATTCACTTTAAAGGATATAC+AGG 0.383467 8.1:+44951585 MS.gene34736:CDS
CCGAATCTTTGGCCAAGCTT+AGG 0.388638 8.1:+44950856 MS.gene34736:CDS
GGCAGAGAGAAGGATATTAA+TGG 0.390004 8.1:-44950796 None:intergenic
CGAATCTTTGGCCAAGCTTA+GGG 0.393635 8.1:+44950857 MS.gene34736:CDS
TTAAATCTCTTCAAGGAAGA+TGG 0.395265 8.1:-44950882 None:intergenic
ACGTACCAAAAGAGATTATT+AGG 0.395270 8.1:+44951243 MS.gene34736:intron
AGCAAAGTCTTTGAAATGTT+CGG 0.401003 8.1:-44949718 None:intergenic
TACGACATACCCGCGACATT+CGG 0.412011 8.1:+44949766 MS.gene34736:CDS
ACTCTCCTGCAAGCTCTCTC+TGG 0.415568 8.1:+44951086 MS.gene34736:CDS
CGAAGTTATCAAGTTGAGAT+TGG 0.421124 8.1:-44949809 None:intergenic
TGGGAAGGAAGGAAAGTATA+TGG 0.423492 8.1:-44949581 None:intergenic
CAATGAGCCTTGTTTCTCAT+AGG 0.428492 8.1:+44949622 MS.gene34736:CDS
CTCATAGGTATCTTCATCTC+TGG 0.436906 8.1:+44949637 MS.gene34736:CDS
TGTAATGTACACAGTCTCTA+TGG 0.437747 8.1:+44950681 MS.gene34736:intron
GGCATCGCCAAGTGTGATAT+CGG 0.438417 8.1:-44950976 None:intergenic
CCTAAGCTTGGCCAAAGATT+CGG 0.439078 8.1:-44950856 None:intergenic
AGTAAATTTAAATCTCTTCA+AGG 0.440949 8.1:-44950889 None:intergenic
GGCCAAAGATTCGGTTGAAA+AGG 0.442677 8.1:-44950847 None:intergenic
CGTGGATCCGCACTGCCGTT+GGG 0.447263 8.1:+44949850 MS.gene34736:CDS
TAATTCCAGAGAGAGCTTGC+AGG 0.458090 8.1:-44951091 None:intergenic
CTCTTCTCGTCTGAGGATCA+AGG 0.463320 8.1:+44949900 MS.gene34736:CDS
CAAAATTTCTAAGATTGGAC+AGG 0.469145 8.1:-44950817 None:intergenic
CAAGTTAATTACCTAGAACT+TGG 0.469252 8.1:-44951782 None:intergenic
CATCGTAGAAATCAAAAGCT+TGG 0.471473 8.1:-44949668 None:intergenic
AGAGATTTAAATTTACTGTA+GGG 0.479221 8.1:+44950895 MS.gene34736:CDS
TTCGGCCTCGCCATCGACGC+CGG 0.481816 8.1:-44949700 None:intergenic
AAGAGATTTAAATTTACTGT+AGG 0.482663 8.1:+44950894 MS.gene34736:CDS
TCTCTATGGTGAGATCTTTG+TGG 0.495271 8.1:+44950695 MS.gene34736:CDS
TACAGGATGTTCGCGTGAGA+TGG 0.495639 8.1:+44951602 MS.gene34736:CDS
GTGTGATATCGGCGAGGCTA+AGG 0.496306 8.1:-44950965 None:intergenic
ATATCCTTTAAAGTGAATAT+AGG 0.507843 8.1:-44951580 None:intergenic
ATCCTCAAGGTGGGGCCCAA+CGG 0.507882 8.1:-44949865 None:intergenic
GAACTTGGTCAAATTTAACT+TGG 0.510908 8.1:-44951767 None:intergenic
ACGTGGATCCGCACTGCCGT+TGG 0.511251 8.1:+44949849 MS.gene34736:CDS
CCAGGAGAAGAAGAAAATGA+TGG 0.521742 8.1:+44949495 MS.gene34736:CDS
TCGGCCTCGCCATCGACGCC+GGG 0.525835 8.1:-44949699 None:intergenic
TTCTACGATGAGTACTCTCC+CGG 0.531961 8.1:+44949681 MS.gene34736:CDS
AGCTGTAATCTCTTCAATGA+TGG 0.533194 8.1:-44950747 None:intergenic
GTGCAAGTCCCCAACAAAAG+TGG 0.536088 8.1:-44950997 None:intergenic
TGCCGTTGGGCCCCACCTTG+AGG 0.539334 8.1:+44949863 MS.gene34736:CDS
CTCTCCCGGCGTCGATGGCG+AGG 0.539871 8.1:+44949695 MS.gene34736:CDS
AGAGAGAGCTTGCAGGAGAG+TGG 0.545504 8.1:-44951084 None:intergenic
GAGTACTCTCCCGGCGTCGA+TGG 0.545589 8.1:+44949690 MS.gene34736:CDS
TAAAGTGAATATAGGTCAAG+TGG 0.551062 8.1:-44951572 None:intergenic
ATTATGAGAGCTTGAAGCAT+AGG 0.560373 8.1:-44951384 None:intergenic
ACGCATCTTCCGAATGTCGC+GGG 0.562648 8.1:-44949775 None:intergenic
GAGAGAGCTTGCAGGAGAGT+GGG 0.567276 8.1:-44951083 None:intergenic
TCTCGCTCTCTTCTCGTCTG+AGG 0.568024 8.1:+44949893 MS.gene34736:CDS
TGTGGAATTGGAACAATCGT+CGG 0.568307 8.1:+44950713 MS.gene34736:CDS
GATACATCACCACATCAATA+CGG 0.577977 8.1:+44951507 MS.gene34736:CDS
AGATTGGACAGGCAGAGAGA+AGG 0.579911 8.1:-44950806 None:intergenic
GGAAGATGGAACCCTAAGCT+TGG 0.579963 8.1:-44950868 None:intergenic
GTTTAGTTGTAATTCAGCAA+TGG 0.580635 8.1:+44951124 MS.gene34736:CDS
GAGGTTAGTGCATGATAGGA+TGG 0.583085 8.1:-44949940 None:intergenic
CAGGAGAAGAAGAAAATGAT+GGG 0.586707 8.1:+44949496 MS.gene34736:CDS
AAGAGATTACAGCTAGACAT+TGG 0.593309 8.1:+44950756 MS.gene34736:CDS
AGTTCAAAACGAAGAAAACC+AGG 0.596394 8.1:+44949477 MS.gene34736:CDS
CTGAACGCTCTGTTGACACG+TGG 0.601980 8.1:+44949832 MS.gene34736:CDS
GAGATGAAGATCCTCAAGGT+GGG 0.607880 8.1:-44949874 None:intergenic
CGGAAGATGCGTCTCTCTTG+CGG 0.610368 8.1:+44949786 MS.gene34736:CDS
TGGCAGACAGTAGATCCCCT+TGG 0.612624 8.1:-44951747 None:intergenic
GAAGAAGAAAATGATGGGCA+AGG 0.612809 8.1:+44949501 MS.gene34736:CDS
ACCACATCAATACGGTCTCA+CGG 0.613811 8.1:+44951515 MS.gene34736:CDS
ACAGCTAGACATTGGTAATG+TGG 0.619275 8.1:+44950764 MS.gene34736:CDS
AGCCTCGCCGATATCACACT+TGG 0.620507 8.1:+44950969 MS.gene34736:CDS
AGGCTAAGGTACTTAAGACC+AGG 0.629957 8.1:-44950951 None:intergenic
AGATGAAGATCCTCAAGGTG+GGG 0.631714 8.1:-44949873 None:intergenic
ACAGTTACCTCATGGAGAGG+AGG 0.634577 8.1:-44949959 None:intergenic
AAAGTGAATATAGGTCAAGT+GGG 0.636598 8.1:-44951571 None:intergenic
AAAACAGTTACCTCATGGAG+AGG 0.640625 8.1:-44949962 None:intergenic
TCTCATAATTCAGAATGCGA+AGG 0.644808 8.1:+44951398 MS.gene34736:CDS
GACGCATCTTCCGAATGTCG+CGG 0.645697 8.1:-44949776 None:intergenic
CGAGATGAAGATCCTCAAGG+TGG 0.647298 8.1:-44949875 None:intergenic
GAGCGAGATGAAGATCCTCA+AGG 0.648810 8.1:-44949878 None:intergenic
TGCATGATAGGATGGCGAGA+GGG 0.650254 8.1:-44949932 None:intergenic
TGTTGGGGACTTGCACAGCG+TGG 0.651349 8.1:+44951004 MS.gene34736:CDS
GCCGTGAGACCGTATTGATG+TGG 0.652564 8.1:-44951516 None:intergenic
TGGGGACTTGCACAGCGTGG+AGG 0.667537 8.1:+44951007 MS.gene34736:CDS
GGTGGGGCCCAACGGCAGTG+CGG 0.675625 8.1:-44949857 None:intergenic
TGTCTTGAGATAGACACACC+TGG 0.677521 8.1:+44950933 MS.gene34736:CDS
GTGCATGATAGGATGGCGAG+AGG 0.679069 8.1:-44949933 None:intergenic
CGCCAAGTGTGATATCGGCG+AGG 0.680205 8.1:-44950971 None:intergenic
GAAGATACCTATGAGAAACA+AGG 0.685034 8.1:-44949629 None:intergenic
GCACTAACCTCCTCTCCATG+AGG 0.685181 8.1:+44949952 MS.gene34736:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCAAAAAAAAAAAAAAAAC+TGG - chr8.1:44951972-44951991 None:intergenic 15.0%
!! ATAGAAATGAATGAAAATAT+AGG + chr8.1:44952198-44952217 MS.gene34736:intron 15.0%
!! CAAAACTACTAAATATATAA+TGG - chr8.1:44951187-44951206 None:intergenic 15.0%
!! TAACAAATAAACATTGAAAA+TGG - chr8.1:44950025-44950044 None:intergenic 15.0%
!!! AATGTTTTTTTAGAAAGTTT+AGG - chr8.1:44950292-44950311 None:intergenic 15.0%
!!! ATTTTCGAAAAATCTATAAT+AGG - chr8.1:44951276-44951295 None:intergenic 15.0%
!!! TATTGAAAAACTCTAAAAAT+AGG + chr8.1:44951946-44951965 MS.gene34736:intron 15.0%
!!! TTTAACTTAAGTTTTATTGT+GGG + chr8.1:44951434-44951453 MS.gene34736:intron 15.0%
!!! TTTTTATTCTAAAATTGTAC+TGG + chr8.1:44950537-44950556 MS.gene34736:intron 15.0%
!! AAGAGATTTAAATTTACTGT+AGG + chr8.1:44950894-44950913 MS.gene34736:CDS 20.0%
!! AATCATATTATTTGTGTCTA+TGG + chr8.1:44952419-44952438 MS.gene34736:intron 20.0%
!! AATGGAATATATAATACACA+TGG - chr8.1:44951169-44951188 None:intergenic 20.0%
!! AATTGTTCTATAATGCTATA+TGG + chr8.1:44952356-44952375 MS.gene34736:intron 20.0%
!! AGAGATTTAAATTTACTGTA+GGG + chr8.1:44950895-44950914 MS.gene34736:CDS 20.0%
!! AGTAAATTTAAATCTCTTCA+AGG - chr8.1:44950892-44950911 None:intergenic 20.0%
!! CTAAGTTAATTCACAATAAA+TGG - chr8.1:44951829-44951848 None:intergenic 20.0%
!! TTAGAAGTTATATTATGATG+TGG + chr8.1:44952136-44952155 MS.gene34736:intron 20.0%
!! TTGTCATATCTTTCATTAAT+TGG - chr8.1:44950431-44950450 None:intergenic 20.0%
!!! ATATCCTTTAAAGTGAATAT+AGG - chr8.1:44951583-44951602 None:intergenic 20.0%
!!! GCCAGTTTTTTTTTTTTTTT+TGG + chr8.1:44951968-44951987 MS.gene34736:intron 20.0%
!!! GTTTAACTTAAGTTTTATTG+TGG + chr8.1:44951433-44951452 MS.gene34736:intron 20.0%
!!! TTTATTTGTTACAGAGAAAT+AGG + chr8.1:44950034-44950053 MS.gene34736:intron 20.0%
!!! TTTTTCGAAAATGTACTTTT+CGG + chr8.1:44951284-44951303 MS.gene34736:CDS 20.0%
! AAATGAATGAAAATATAGGC+TGG + chr8.1:44952202-44952221 MS.gene34736:intron 25.0%
! AATAGTAGTAAATCTGTGTT+TGG + chr8.1:44951886-44951905 MS.gene34736:intron 25.0%
! ATAGTAGTAAATCTGTGTTT+GGG + chr8.1:44951887-44951906 MS.gene34736:intron 25.0%
! CGTTTAACTCAATTTAACTA+TGG + chr8.1:44951994-44952013 MS.gene34736:intron 25.0%
! TAATGTTAAGTTAATGTTGC+AGG + chr8.1:44952462-44952481 MS.gene34736:intron 25.0%
! TTGACCTATATTCACTTTAA+AGG + chr8.1:44951576-44951595 MS.gene34736:CDS 25.0%
! TTTCATATTTGAGTCATAAC+AGG + chr8.1:44949984-44950003 MS.gene34736:intron 25.0%
!! AAATGTACTTTTCGGAATTT+CGG + chr8.1:44951292-44951311 MS.gene34736:CDS 25.0%
!! ATTCACTTTAAAGGATATAC+AGG + chr8.1:44951585-44951604 MS.gene34736:CDS 25.0%
!!! AGTTCCAAAATTTCTAAGAT+TGG - chr8.1:44950825-44950844 None:intergenic 25.0%
AAAATAACTCGAGGAAAACT+AGG + chr8.1:44950333-44950352 MS.gene34736:intron 30.0%
AAAGTGAATATAGGTCAAGT+GGG - chr8.1:44951574-44951593 None:intergenic 30.0%
ACGTACCAAAAGAGATTATT+AGG + chr8.1:44951243-44951262 MS.gene34736:intron 30.0%
ACTTAGAAATTGTATCAGTC+TGG - chr8.1:44952286-44952305 None:intergenic 30.0%
ATACTAGTTGTTTATCGTAG+AGG + chr8.1:44952250-44952269 MS.gene34736:intron 30.0%
ATGAAAAAACAGTTACCTCA+TGG - chr8.1:44949970-44949989 None:intergenic 30.0%
ATGGTAGTATTACCATCTTA+TGG + chr8.1:44952013-44952032 MS.gene34736:intron 30.0%
CAAGTTAATTACCTAGAACT+TGG - chr8.1:44951785-44951804 None:intergenic 30.0%
CACAATAAATGGCATGAAAA+TGG - chr8.1:44951818-44951837 None:intergenic 30.0%
CTTGTGTTAGTGATGTTATA+AGG - chr8.1:44952334-44952353 None:intergenic 30.0%
GAACTTGGTCAAATTTAACT+TGG - chr8.1:44951770-44951789 None:intergenic 30.0%
GTGGTGTTTGTTTGATTATT+TGG + chr8.1:44951460-44951479 MS.gene34736:intron 30.0%
GTTAAATTTGACCAAGTTCT+AGG + chr8.1:44951771-44951790 MS.gene34736:CDS 30.0%
GTTTAGTTGTAATTCAGCAA+TGG + chr8.1:44951124-44951143 MS.gene34736:CDS 30.0%
TAAAGTGAATATAGGTCAAG+TGG - chr8.1:44951575-44951594 None:intergenic 30.0%
TACAGAGAAATAGGTACAAT+GGG + chr8.1:44950043-44950062 MS.gene34736:intron 30.0%
TAGTAGTAAATCTGTGTTTG+GGG + chr8.1:44951888-44951907 MS.gene34736:intron 30.0%
TCGAAAATTGTCTGAGAAAA+TGG - chr8.1:44951722-44951741 None:intergenic 30.0%
TGATCTGTATGTACATTAGT+TGG + chr8.1:44950214-44950233 MS.gene34736:intron 30.0%
TGGTAGTATTACCATCTTAT+GGG + chr8.1:44952014-44952033 MS.gene34736:intron 30.0%
TGTTAGTGATGTTATAAGGA+TGG - chr8.1:44952330-44952349 None:intergenic 30.0%
TGTTATCTGAAAATAACTCG+AGG + chr8.1:44950324-44950343 MS.gene34736:intron 30.0%
TTAAATCTCTTCAAGGAAGA+TGG - chr8.1:44950885-44950904 None:intergenic 30.0%
TTACAGAGAAATAGGTACAA+TGG + chr8.1:44950042-44950061 MS.gene34736:intron 30.0%
TTAGAAAGTTTAGGTGAGTT+GGG - chr8.1:44950283-44950302 None:intergenic 30.0%
TTAGACATTCACTTGCAAAA+TGG + chr8.1:44950513-44950532 MS.gene34736:intron 30.0%
TTGAAGACAATGCTTATTTC+TGG + chr8.1:44951660-44951679 MS.gene34736:CDS 30.0%
TTTAGAAAGTTTAGGTGAGT+TGG - chr8.1:44950284-44950303 None:intergenic 30.0%
TTTATTCCTTTCCCATAAGA+TGG - chr8.1:44952028-44952047 None:intergenic 30.0%
! ACAATTTTCGAATATGCCAA+GGG + chr8.1:44951731-44951750 MS.gene34736:CDS 30.0%
! AGACAATTAGGAACACTTTT+CGG - chr8.1:44951546-44951565 None:intergenic 30.0%
! CTGTCCAATCTTAGAAATTT+TGG + chr8.1:44950818-44950837 MS.gene34736:CDS 30.0%
! GACTACCTAATAATCTCTTT+TGG - chr8.1:44951251-44951270 None:intergenic 30.0%
! GCTAGTTATGTTTTGCATTA+TGG + chr8.1:44951630-44951649 MS.gene34736:CDS 30.0%
! TATCAGTAAGATTTGGTCAA+TGG - chr8.1:44952165-44952184 None:intergenic 30.0%
!! AGCAAAGTCTTTGAAATGTT+CGG - chr8.1:44949721-44949740 None:intergenic 30.0%
!! CAAAATTTCTAAGATTGGAC+AGG - chr8.1:44950820-44950839 None:intergenic 30.0%
!! CAAGTTCTAGGTAATTAACT+TGG + chr8.1:44951783-44951802 MS.gene34736:intron 30.0%
!!! GCTTATTTCTGGTTTTTTGT+CGG + chr8.1:44951671-44951690 MS.gene34736:CDS 30.0%
AAATTGTATCAGTCTGGTGA+AGG - chr8.1:44952280-44952299 None:intergenic 35.0%
AACCCTCTATCAGTAAGATT+TGG - chr8.1:44952172-44952191 None:intergenic 35.0%
AAGAGATTACAGCTAGACAT+TGG + chr8.1:44950756-44950775 MS.gene34736:CDS 35.0%
AAGTGGGATACAAGACAATT+AGG - chr8.1:44951558-44951577 None:intergenic 35.0%
AGATATGACAAAACTCGCTA+AGG + chr8.1:44950440-44950459 MS.gene34736:intron 35.0%
AGCTGTAATCTCTTCAATGA+TGG - chr8.1:44950750-44950769 None:intergenic 35.0%
AGTAGTAAATCTGTGTTTGG+GGG + chr8.1:44951889-44951908 MS.gene34736:intron 35.0%
AGTTCAAAACGAAGAAAACC+AGG + chr8.1:44949477-44949496 MS.gene34736:CDS 35.0%
ATCAACTTCCACTATTGATG+TGG + chr8.1:44950175-44950194 MS.gene34736:intron 35.0%
ATTATGAGAGCTTGAAGCAT+AGG - chr8.1:44951387-44951406 None:intergenic 35.0%
CAGGAGAAGAAGAAAATGAT+GGG + chr8.1:44949496-44949515 MS.gene34736:CDS 35.0%
CATCGTAGAAATCAAAAGCT+TGG - chr8.1:44949671-44949690 None:intergenic 35.0%
GAAGATACCTATGAGAAACA+AGG - chr8.1:44949632-44949651 None:intergenic 35.0%
GACCAAATCTTACTGATAGA+GGG + chr8.1:44952167-44952186 MS.gene34736:intron 35.0%
GATACATCACCACATCAATA+CGG + chr8.1:44951507-44951526 MS.gene34736:CDS 35.0%
GTATTACCATCTTATGGGAA+AGG + chr8.1:44952019-44952038 MS.gene34736:intron 35.0%
TACAAAAAAGGGTCGAAAGT+AGG - chr8.1:44951345-44951364 None:intergenic 35.0%
TCAACTTCCACTATTGATGT+GGG + chr8.1:44950176-44950195 MS.gene34736:intron 35.0%
TCTCATAATTCAGAATGCGA+AGG + chr8.1:44951398-44951417 MS.gene34736:CDS 35.0%
TGACCAAATCTTACTGATAG+AGG + chr8.1:44952166-44952185 MS.gene34736:intron 35.0%
TGATGTTATAAGGATGGTGA+GGG - chr8.1:44952324-44952343 None:intergenic 35.0%
TGTAATGTACACAGTCTCTA+TGG + chr8.1:44950681-44950700 MS.gene34736:intron 35.0%
! ACAATGAAAGTTGACTCAGT+TGG + chr8.1:44950121-44950140 MS.gene34736:intron 35.0%
! CAATTTTCGAATATGCCAAG+GGG + chr8.1:44951732-44951751 MS.gene34736:CDS 35.0%
! GACAATTTTCGAATATGCCA+AGG + chr8.1:44951730-44951749 MS.gene34736:CDS 35.0%
! TTCCTTTTCAACCGAATCTT+TGG + chr8.1:44950845-44950864 MS.gene34736:CDS 35.0%
!! CGAAGTTATCAAGTTGAGAT+TGG - chr8.1:44949812-44949831 None:intergenic 35.0%
!!! GACTTTGCTATTTTCGTCAA+CGG + chr8.1:44949732-44949751 MS.gene34736:CDS 35.0%
!!! GTACACACAGTTGTTTTTGT+GGG - chr8.1:44949603-44949622 None:intergenic 35.0%
!!! TAAGTTTTATTGTGGGTGTG+TGG + chr8.1:44951441-44951460 MS.gene34736:intron 35.0%
!!! TGTACACACAGTTGTTTTTG+TGG - chr8.1:44949604-44949623 None:intergenic 35.0%
AAAACAGTTACCTCATGGAG+AGG - chr8.1:44949965-44949984 None:intergenic 40.0%
ACGTACACAACAACAACAAG+TGG - chr8.1:44951227-44951246 None:intergenic 40.0%
AGAGATTCCCACATCAATAG+TGG - chr8.1:44950186-44950205 None:intergenic 40.0%
ATCCCCAATTACTACTCCAT+CGG - chr8.1:44950361-44950380 None:intergenic 40.0%
ATCCGATGGAGTAGTAATTG+GGG + chr8.1:44950356-44950375 MS.gene34736:intron 40.0%
CAACAACAAGTGGAGATACA+AGG - chr8.1:44951217-44951236 None:intergenic 40.0%
CCAGGAGAAGAAGAAAATGA+TGG + chr8.1:44949495-44949514 MS.gene34736:CDS 40.0%
CTCATAGGTATCTTCATCTC+TGG + chr8.1:44949637-44949656 MS.gene34736:CDS 40.0%
GAAGCACGTCGTACAAAAAA+GGG - chr8.1:44951356-44951375 None:intergenic 40.0%
GAGCTCACAATGCAAAAAAC+TGG - chr8.1:44951915-44951934 None:intergenic 40.0%
GATCCGATGGAGTAGTAATT+GGG + chr8.1:44950355-44950374 MS.gene34736:intron 40.0%
GATGTATCCTGCAGAAAACA+AGG - chr8.1:44951495-44951514 None:intergenic 40.0%
GATGTTATAAGGATGGTGAG+GGG - chr8.1:44952323-44952342 None:intergenic 40.0%
GGCAGAGAGAAGGATATTAA+TGG - chr8.1:44950799-44950818 None:intergenic 40.0%
GTGATGTTATAAGGATGGTG+AGG - chr8.1:44952325-44952344 None:intergenic 40.0%
TCTCTATGGTGAGATCTTTG+TGG + chr8.1:44950695-44950714 MS.gene34736:CDS 40.0%
TGAAGCACGTCGTACAAAAA+AGG - chr8.1:44951357-44951376 None:intergenic 40.0%
TGATGTGGGAATCTCTTTGT+TGG + chr8.1:44950190-44950209 MS.gene34736:intron 40.0%
TGGTGAGATCTTTGTGGAAT+TGG + chr8.1:44950701-44950720 MS.gene34736:CDS 40.0%
TGTGGAATTGGAACAATCGT+CGG + chr8.1:44950713-44950732 MS.gene34736:CDS 40.0%
! AAGTTGATCTCATGACCTTG+CGG - chr8.1:44950163-44950182 None:intergenic 40.0%
! CCATCATTTTCTTCTTCTCC+TGG - chr8.1:44949498-44949517 None:intergenic 40.0%
! TGGGAAGGAAGGAAAGTATA+TGG - chr8.1:44949584-44949603 None:intergenic 40.0%
!! ACAGCTAGACATTGGTAATG+TGG + chr8.1:44950764-44950783 MS.gene34736:CDS 40.0%
!! CAATGAGCCTTGTTTCTCAT+AGG + chr8.1:44949622-44949641 MS.gene34736:CDS 40.0%
!! GAAGAAGAAAATGATGGGCA+AGG + chr8.1:44949501-44949520 MS.gene34736:CDS 40.0%
!! GCATTGTGAGCTCACTTTTA+AGG + chr8.1:44951922-44951941 MS.gene34736:intron 40.0%
!!! ACACAGTTGTTTTTGTGGGA+AGG - chr8.1:44949599-44949618 None:intergenic 40.0%
!!! AGTTGTACCTTGTTTTCTGC+AGG + chr8.1:44951485-44951504 MS.gene34736:intron 40.0%
!!! AGTTGTTTTTGTGGGAAGGA+AGG - chr8.1:44949595-44949614 None:intergenic 40.0%
ACATTAGTTGGCACTCACAG+AGG + chr8.1:44950226-44950245 MS.gene34736:intron 45.0%
ACCACATCAATACGGTCTCA+CGG + chr8.1:44951515-44951534 MS.gene34736:CDS 45.0%
AGAGGAGGTTAGTGCATGAT+AGG - chr8.1:44949947-44949966 None:intergenic 45.0%
AGATGAAGATCCTCAAGGTG+GGG - chr8.1:44949876-44949895 None:intergenic 45.0%
AGTTGATCTCATGACCTTGC+GGG - chr8.1:44950162-44950181 None:intergenic 45.0%
CATTAGTTGGCACTCACAGA+GGG + chr8.1:44950227-44950246 MS.gene34736:intron 45.0%
CCTAAGCTTGGCCAAAGATT+CGG - chr8.1:44950859-44950878 None:intergenic 45.0%
CGAATCTTTGGCCAAGCTTA+GGG + chr8.1:44950857-44950876 MS.gene34736:CDS 45.0%
GAGATGAAGATCCTCAAGGT+GGG - chr8.1:44949877-44949896 None:intergenic 45.0%
GAGGTTAGTGCATGATAGGA+TGG - chr8.1:44949943-44949962 None:intergenic 45.0%
GGATCCGATGGAGTAGTAAT+TGG + chr8.1:44950354-44950373 MS.gene34736:intron 45.0%
TAATTCCAGAGAGAGCTTGC+AGG - chr8.1:44951094-44951113 None:intergenic 45.0%
TGTCTTGAGATAGACACACC+TGG + chr8.1:44950933-44950952 MS.gene34736:CDS 45.0%
TTCTACGATGAGTACTCTCC+CGG + chr8.1:44949681-44949700 MS.gene34736:CDS 45.0%
TTGTATCAGTCTGGTGAAGG+AGG - chr8.1:44952277-44952296 None:intergenic 45.0%
! AGGCTAAGGTACTTAAGACC+AGG - chr8.1:44950954-44950973 None:intergenic 45.0%
! GGCCAAAGATTCGGTTGAAA+AGG - chr8.1:44950850-44950869 None:intergenic 45.0%
!!! TTGGCGATGCCACTTTTGTT+GGG + chr8.1:44950988-44951007 MS.gene34736:CDS 45.0%
ACAGTTACCTCATGGAGAGG+AGG - chr8.1:44949962-44949981 None:intergenic 50.0%
AGATTGGACAGGCAGAGAGA+AGG - chr8.1:44950809-44950828 None:intergenic 50.0%
CCGAATCTTTGGCCAAGCTT+AGG + chr8.1:44950856-44950875 MS.gene34736:CDS 50.0%
CGAGATGAAGATCCTCAAGG+TGG - chr8.1:44949878-44949897 None:intergenic 50.0%
CGAGGAAAACTAGGATCCGA+TGG + chr8.1:44950342-44950361 MS.gene34736:intron 50.0%
CTCTTCTCGTCTGAGGATCA+AGG + chr8.1:44949900-44949919 MS.gene34736:CDS 50.0%
CTTGCAGGAGAGTGGGTAAA+AGG - chr8.1:44951079-44951098 None:intergenic 50.0%
GAGCGAGATGAAGATCCTCA+AGG - chr8.1:44949881-44949900 None:intergenic 50.0%
GGAAGATGGAACCCTAAGCT+TGG - chr8.1:44950871-44950890 None:intergenic 50.0%
GGCATCGCCAAGTGTGATAT+CGG - chr8.1:44950979-44950998 None:intergenic 50.0%
GTGCAAGTCCCCAACAAAAG+TGG - chr8.1:44951000-44951019 None:intergenic 50.0%
TACAGGATGTTCGCGTGAGA+TGG + chr8.1:44951602-44951621 MS.gene34736:CDS 50.0%
TACGACATACCCGCGACATT+CGG + chr8.1:44949766-44949785 MS.gene34736:CDS 50.0%
TGCATGATAGGATGGCGAGA+GGG - chr8.1:44949935-44949954 None:intergenic 50.0%
! AAGTAGTTGACTCACCCGCA+AGG + chr8.1:44950145-44950164 MS.gene34736:intron 50.0%
!!! CTTGGCGATGCCACTTTTGT+TGG + chr8.1:44950987-44951006 MS.gene34736:CDS 50.0%
!!! TGGCGATGCCACTTTTGTTG+GGG + chr8.1:44950989-44951008 MS.gene34736:CDS 50.0%
ACGCATCTTCCGAATGTCGC+GGG - chr8.1:44949778-44949797 None:intergenic 55.0%
ACTCTCCTGCAAGCTCTCTC+TGG + chr8.1:44951086-44951105 MS.gene34736:CDS 55.0%
AGAGAGAGCTTGCAGGAGAG+TGG - chr8.1:44951087-44951106 None:intergenic 55.0%
AGCCTCGCCGATATCACACT+TGG + chr8.1:44950969-44950988 MS.gene34736:CDS 55.0%
CGGAAGATGCGTCTCTCTTG+CGG + chr8.1:44949786-44949805 MS.gene34736:CDS 55.0%
CTGAACGCTCTGTTGACACG+TGG + chr8.1:44949832-44949851 MS.gene34736:CDS 55.0%
GACGCATCTTCCGAATGTCG+CGG - chr8.1:44949779-44949798 None:intergenic 55.0%
GAGAGAGCTTGCAGGAGAGT+GGG - chr8.1:44951086-44951105 None:intergenic 55.0%
GCACTAACCTCCTCTCCATG+AGG + chr8.1:44949952-44949971 MS.gene34736:CDS 55.0%
GTGCATGATAGGATGGCGAG+AGG - chr8.1:44949936-44949955 None:intergenic 55.0%
GTGTGATATCGGCGAGGCTA+AGG - chr8.1:44950968-44950987 None:intergenic 55.0%
TCTCGCTCTCTTCTCGTCTG+AGG + chr8.1:44949893-44949912 MS.gene34736:CDS 55.0%
TGGCAGACAGTAGATCCCCT+TGG - chr8.1:44951750-44951769 None:intergenic 55.0%
! GCCGTGAGACCGTATTGATG+TGG - chr8.1:44951519-44951538 None:intergenic 55.0%
! GTTTAGGTGAGTTGGGCTCC+AGG - chr8.1:44950276-44950295 None:intergenic 55.0%
ATCCTCAAGGTGGGGCCCAA+CGG - chr8.1:44949868-44949887 None:intergenic 60.0%
CGCCAAGTGTGATATCGGCG+AGG - chr8.1:44950974-44950993 None:intergenic 60.0%
GAGTTGGGCTCCAGGAGCTA+CGG - chr8.1:44950268-44950287 None:intergenic 60.0%
GGATGGTGAGGGGCAGAGTA+AGG - chr8.1:44952313-44952332 None:intergenic 60.0%
TGTTGGGGACTTGCACAGCG+TGG + chr8.1:44951004-44951023 MS.gene34736:CDS 60.0%
ACGTGGATCCGCACTGCCGT+TGG + chr8.1:44949849-44949868 MS.gene34736:CDS 65.0%
CGTGGATCCGCACTGCCGTT+GGG + chr8.1:44949850-44949869 MS.gene34736:CDS 65.0%
TGGGGACTTGCACAGCGTGG+AGG + chr8.1:44951007-44951026 MS.gene34736:CDS 65.0%
! GAGTACTCTCCCGGCGTCGA+TGG + chr8.1:44949690-44949709 MS.gene34736:CDS 65.0%
CCAGGAGCTACGGCGCGACA+AGG - chr8.1:44950258-44950277 None:intergenic 70.0%
CCTTGTCGCGCCGTAGCTCC+TGG + chr8.1:44950255-44950274 MS.gene34736:intron 70.0%
TGCCGTTGGGCCCCACCTTG+AGG + chr8.1:44949863-44949882 MS.gene34736:CDS 70.0%
TTCGGCCTCGCCATCGACGC+CGG - chr8.1:44949703-44949722 None:intergenic 70.0%
GGTGGGGCCCAACGGCAGTG+CGG - chr8.1:44949860-44949879 None:intergenic 75.0%
TCGGCCTCGCCATCGACGCC+GGG - chr8.1:44949702-44949721 None:intergenic 75.0%
!! CTCTCCCGGCGTCGATGGCG+AGG + chr8.1:44949695-44949714 MS.gene34736:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 44949468 44952488 44949468 ID=MS.gene34736
chr8.1 mRNA 44949468 44952488 44949468 ID=MS.gene34736.t1;Parent=MS.gene34736
chr8.1 exon 44949468 44949973 44949468 ID=MS.gene34736.t1.exon1;Parent=MS.gene34736.t1
chr8.1 CDS 44949468 44949973 44949468 ID=cds.MS.gene34736.t1;Parent=MS.gene34736.t1
chr8.1 exon 44950695 44951145 44950695 ID=MS.gene34736.t1.exon2;Parent=MS.gene34736.t1
chr8.1 CDS 44950695 44951145 44950695 ID=cds.MS.gene34736.t1;Parent=MS.gene34736.t1
chr8.1 exon 44951255 44951419 44951255 ID=MS.gene34736.t1.exon3;Parent=MS.gene34736.t1
chr8.1 CDS 44951255 44951419 44951255 ID=cds.MS.gene34736.t1;Parent=MS.gene34736.t1
chr8.1 exon 44951507 44951792 44951507 ID=MS.gene34736.t1.exon4;Parent=MS.gene34736.t1
chr8.1 CDS 44951507 44951792 44951507 ID=cds.MS.gene34736.t1;Parent=MS.gene34736.t1
chr8.1 exon 44952484 44952488 44952484 ID=MS.gene34736.t1.exon5;Parent=MS.gene34736.t1
chr8.1 CDS 44952484 44952488 44952484 ID=cds.MS.gene34736.t1;Parent=MS.gene34736.t1
Gene Sequence

>MS.gene34736

ATGGAGGAAAGTTCAAAACGAAGAAAACCAGGAGAAGAAGAAAATGATGGGCAAGGCAGTAACAGTAACAGTAACAAAGACAGATTAAGCAGTCTGTCAGACTCTCTCTTGTGCCATATACTTTCCTTCCTTCCCACAAAAACAACTGTGTGTACAATGAGCCTTGTTTCTCATAGGTATCTTCATCTCTGGAAACATCTCCAAGCTTTTGATTTCTACGATGAGTACTCTCCCGGCGTCGATGGCGAGGCCGAACATTTCAAAGACTTTGCTATTTTCGTCAACGGCTTTCTCTCTTTACGACATACCCGCGACATTCGGAAGATGCGTCTCTCTTGCGGCCAATCTCAACTTGATAACTTCGCTGAACGCTCTGTTGACACGTGGATCCGCACTGCCGTTGGGCCCCACCTTGAGGATCTTCATCTCGCTCTCTTCTCGTCTGAGGATCAAGGCTTCAAACTCCCTCTCGCCATCCTATCATGCACTAACCTCCTCTCCATGAGGTAACTGTTTTTTCATATTTGAGTCATAACAGGATTTTAGTCTCATTTCCATTTTCAATGTTTATTTGTTACAGAGAAATAGGTACAATGGGATAACAGATGATTAAAATTATTTTATGAAAAAAGTAACAAGATTTATTGATTTTAACAATGAAAGTTGACTCAGTTGGTAAGTAGTTGACTCACCCGCAAGGTCATGAGATCAACTTCCACTATTGATGTGGGAATCTCTTTGTTGGTTGATCTGTATGTACATTAGTTGGCACTCACAGAGGGACATGCCTTGTCGCGCCGTAGCTCCTGGAGCCCAACTCACCTAAACTTTCTAAAAAAACATTTATTGATTGTTTTGTTATCTGAAAATAACTCGAGGAAAACTAGGATCCGATGGAGTAGTAATTGGGGATTTTATGATTATTATGCTAATTAAGCAAAGACATTTTCAATTAACATACCAATTAATGAAAGATATGACAAAACTCGCTAAGGAAAAGACGCTATGTCATGTTTTGTTACATTGTTACATACATTTAACATTATTAGACATTCACTTGCAAAATGGCTTTTTATTCTAAAATTGTACTGGTATTTACAAAAAATTAGTCTTTTTTAGAGCTACAAAGATATTTCAGTCATTTTTTTATTTATTATTTGCACACTTCTTCTTGTTAAATGTGACATGATAAATGATGATAACATAAGATTTGTGTAATGTACACAGTCTCTATGGTGAGATCTTTGTGGAATTGGAACAATCGTCGGCTGTTTGTTTACCATCATTGAAGAGATTACAGCTAGACATTGGTAATGTGGATGTGAATGCCATTAATATCCTTCTCTCTGCCTGTCCAATCTTAGAAATTTTGGAACTTTCCTTTTCAACCGAATCTTTGGCCAAGCTTAGGGTTCCATCTTCCTTGAAGAGATTTAAATTTACTGTAGGGAATGACATTGAAGTTTGTCTTGAGATAGACACACCTGGTCTTAAGTACCTTAGCCTCGCCGATATCACACTTGGCGATGCCACTTTTGTTGGGGACTTGCACAGCGTGGAGGAAGCATATCTTGATTTAGAGTGCTCTTCTGAAAGTGATTCTGTTGACCTTTTACCCACTCTCCTGCAAGCTCTCTCTGGAATTAAACGTCTAGTGTTTAGTTGTAATTCAGCAATGGTGAGTGCAATTTTCATTATCCATGTGTATTATATATTCCATTATATATTTAGTAGTTTTGTGCTAATCCTTGTATCTCCACTTGTTGTTGTTGTGTACGTACCAAAAGAGATTATTAGGTAGTCAACCTATTATAGATTTTTCGAAAATGTACTTTTCGGAATTTCGGTGTTTACTACATCTTGAGCTCATTCTTCCTACTTTCGACCCTTTTTTGTACGACGTGCTTCAGAAATGTCCTATGCTTCAAGCTCTCATAATTCAGAATGCGAAGGTTCGTAAATAGAGTTTAACTTAAGTTTTATTGTGGGTGTGTGGTGTTTGTTTGATTATTTGGTGAGTTGTACCTTGTTTTCTGCAGGATACATCACCACATCAATACGGTCTCACGGCAAAGCCGAAAAGTGTTCCTAATTGTCTTGTATCCCACTTGACCTATATTCACTTTAAAGGATATACAGGATGTTCGCGTGAGATGGAATTTGCTAGTTATGTTTTGCATTATGGACTTGTTTTGAAGACAATGCTTATTTCTGGTTTTTTGTCGGATGAAAGCAAGAAGTCGACAAAGTACCATTTTCTCAGACAATTTTCGAATATGCCAAGGGGATCTACTGTCTGCCAAGTTAAATTTGACCAAGTTCTAGGTAATTAACTTGGTACGAAGTACCATTTTCATGCCATTTATTGTGAATTAACTTAGTAATTTTGCATTGTGAGCTTTTTTTTTAATTAGTAATAATAGTAGTAAATCTGTGTTTGGGGGCCAGTTTTTTGCATTGTGAGCTCACTTTTAAGGTTATTGAAAAACTCTAAAAATAGGCCAGTTTTTTTTTTTTTTTTGGTTGCGTTTAACTCAATTTAACTATGGTAGTATTACCATCTTATGGGAAAGGAATAAATTTCTTATGTTCATGTATCAGTTAAGAATTTTTTAACTTCTGTTTCAATGATATTTTATATTTTCTACTTTCTACAAATGTATTTTATTTAGAAGTTATATTATGATGTGGTTGCCATTGACCAAATCTTACTGATAGAGGGTTCAAATGATAGAAATGAATGAAAATATAGGCTGGTCTTTACTGATGATCTAAAAGAATTATACTAGTTGTTTATCGTAGAGGACCTCCTTCACCAGACTGATACAATTTCTAAGTTATTCCTTACTCTGCCCCTCACCATCCTTATAACATCACTAACACAAGTCAATTGTTCTATAATGCTATATGGCATGATTTGTTAAAACTGATTATGTCATTTTTTGTTGATAAATCATATTATTTGTGTCTATGGATTTAAATTACGTGAATTACTAATGTTAAGTTAATGTTGCAGGATGA

Protein sequence

>MS.gene34736.t1

MEESSKRRKPGEEENDGQGSNSNSNKDRLSSLSDSLLCHILSFLPTKTTVCTMSLVSHRYLHLWKHLQAFDFYDEYSPGVDGEAEHFKDFAIFVNGFLSLRHTRDIRKMRLSCGQSQLDNFAERSVDTWIRTAVGPHLEDLHLALFSSEDQGFKLPLAILSCTNLLSMSLYGEIFVELEQSSAVCLPSLKRLQLDIGNVDVNAINILLSACPILEILELSFSTESLAKLRVPSSLKRFKFTVGNDIEVCLEIDTPGLKYLSLADITLGDATFVGDLHSVEEAYLDLECSSESDSVDLLPTLLQALSGIKRLVFSCNSAMRLLGSQPIIDFSKMYFSEFRCLLHLELILPTFDPFLYDVLQKCPMLQALIIQNAKDTSPHQYGLTAKPKSVPNCLVSHLTYIHFKGYTGCSREMEFASYVLHYGLVLKTMLISGFLSDESKKSTKYHFLRQFSNMPRGSTVCQVKFDQVLG