AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014840.t1 MTR_3g107100 96.000 250 10 0 1 250 1 250 2.25e-172 481
MS.gene014840.t1 MTR_3g107160 55.512 254 105 5 1 250 1 250 1.84e-82 252
MS.gene014840.t1 MTR_3g107120 51.923 260 107 4 5 250 3 258 1.98e-74 232
MS.gene014840.t1 MTR_2g007400 44.882 254 125 6 11 250 12 264 2.14e-56 185
MS.gene014840.t1 MTR_1g053025 47.581 248 113 8 11 245 2 245 3.91e-54 179
MS.gene014840.t1 MTR_2g007500 44.082 245 114 6 11 250 14 240 4.15e-53 175
MS.gene014840.t1 MTR_4g098590 44.082 245 123 6 13 245 1 243 2.11e-52 174
MS.gene014840.t1 MTR_2g007450 43.969 257 121 8 11 246 16 270 7.49e-50 169
MS.gene014840.t1 MTR_3g107140 51.955 179 71 4 41 207 22 197 3.99e-49 160
MS.gene014840.t1 MTR_5g083890 41.379 261 130 7 10 249 5 263 1.15e-48 167
MS.gene014840.t1 MTR_1g107385 42.529 261 126 8 10 250 31 287 4.28e-47 161
MS.gene014840.t1 MTR_7g075820 38.996 259 134 5 10 247 5 260 2.43e-44 154
MS.gene014840.t1 MTR_3g099830 38.866 247 118 5 11 249 12 233 1.31e-41 146
MS.gene014840.t1 MTR_2g007360 40.726 248 109 8 11 250 12 229 1.55e-41 146
MS.gene014840.t1 MTR_2g005990 38.889 252 139 5 11 249 6 255 4.46e-41 145
MS.gene014840.t1 MTR_3g026920 37.945 253 115 6 11 237 19 255 1.32e-40 144
MS.gene014840.t1 MTR_2g008310 39.357 249 127 5 11 247 2 238 3.64e-40 142
MS.gene014840.t1 MTR_2g008320 37.008 254 130 5 11 247 52 292 1.03e-39 142
MS.gene014840.t1 MTR_1g041245 38.521 257 134 9 1 248 1 242 1.30e-38 138
MS.gene014840.t1 MTR_5g073420 38.462 247 124 9 11 247 11 239 6.40e-36 131
MS.gene014840.t1 MTR_8g085430 40.909 220 112 8 1 208 1 214 6.56e-36 130
MS.gene014840.t1 MTR_7g007340 36.066 244 122 5 7 247 9 221 3.74e-34 126
MS.gene014840.t1 MTR_7g026500 38.153 249 131 10 11 248 14 250 1.75e-32 122
MS.gene014840.t1 MTR_7g032380 39.801 201 106 8 11 204 11 203 1.07e-31 119
MS.gene014840.t1 MTR_7g056433 40.513 195 109 5 3 193 4 195 1.70e-31 119
MS.gene014840.t1 MTR_1g085120 36.255 251 142 8 7 248 175 416 1.35e-30 118
MS.gene014840.t1 MTR_1g085120 36.255 251 142 8 7 248 88 329 1.76e-30 118
MS.gene014840.t1 MTR_1g085120 36.255 251 142 8 7 248 163 404 2.94e-30 118
MS.gene014840.t1 MTR_7g083740 36.818 220 108 5 11 226 17 209 3.40e-30 115
MS.gene014840.t1 MTR_3g036250 41.053 190 101 5 11 194 5 189 6.07e-30 115
MS.gene014840.t1 MTR_6g011460 36.214 243 136 7 11 246 46 276 1.38e-29 115
MS.gene014840.t1 MTR_7g115270 37.069 232 126 7 10 226 11 237 1.55e-29 114
MS.gene014840.t1 MTR_7g034090 46.053 152 66 3 10 153 3 146 1.77e-29 115
MS.gene014840.t1 MTR_3g040700 39.175 194 99 5 11 194 43 227 1.83e-29 115
MS.gene014840.t1 MTR_7g098510 38.095 189 105 4 11 194 18 199 3.73e-29 113
MS.gene014840.t1 MTR_3g450920 46.250 160 70 5 63 219 65 211 4.62e-29 109
MS.gene014840.t1 MTR_5g058000 36.100 241 137 7 11 245 8 237 5.62e-29 112
MS.gene014840.t1 MTR_3g108150 35.656 244 137 7 9 247 11 239 5.95e-29 112
MS.gene014840.t1 MTR_7g007370 34.677 248 110 7 5 249 11 209 7.53e-29 112
MS.gene014840.t1 MTR_7g056287 34.016 244 139 7 10 243 2 233 1.67e-28 111
MS.gene014840.t1 MTR_3g023630 38.806 201 106 7 9 201 6 197 3.69e-28 110
MS.gene014840.t1 MTR_4g039440 36.735 245 131 7 11 245 34 264 6.72e-28 110
MS.gene014840.t1 MTR_7g056277 33.603 247 142 7 10 246 258 492 1.21e-27 111
MS.gene014840.t1 MTR_5g058100 35.124 242 139 7 11 245 9 239 1.85e-27 108
MS.gene014840.t1 MTR_7g056447 38.384 198 109 6 7 199 5 194 3.02e-27 106
MS.gene014840.t1 MTR_7g060470 33.209 268 141 7 10 250 2 258 4.56e-27 107
MS.gene014840.t1 MTR_0492s0020 38.378 185 105 4 10 194 85 260 8.10e-27 107
MS.gene014840.t1 MTR_0543s0010 38.378 185 105 4 10 194 85 260 9.94e-27 107
MS.gene014840.t1 MTR_2g007530 39.655 174 75 6 11 154 19 192 3.96e-26 104
MS.gene014840.t1 MTR_4g134150 36.410 195 105 7 10 199 13 193 6.74e-26 101
MS.gene014840.t1 MTR_7g056430 37.811 201 86 6 10 205 8 174 8.56e-26 106
MS.gene014840.t1 MTR_7g056420 37.811 201 86 6 10 205 8 174 1.10e-25 105
MS.gene014840.t1 MTR_7g055943 37.004 227 127 7 7 225 36 254 2.42e-25 103
MS.gene014840.t1 MTR_1089s0010 34.118 255 144 9 4 249 1 240 3.03e-25 102
MS.gene014840.t1 MTR_7g098570 37.566 189 106 4 11 194 20 201 3.06e-25 103
MS.gene014840.t1 MTR_7g114710 37.895 190 107 6 11 195 13 196 3.86e-25 102
MS.gene014840.t1 MTR_2g007550 39.157 166 72 4 11 163 14 163 7.57e-25 101
MS.gene014840.t1 MTR_1g108820 33.068 251 139 9 11 247 8 243 8.09e-25 101
MS.gene014840.t1 MTR_0009s0080 34.568 243 135 8 13 245 20 248 9.75e-25 102
MS.gene014840.t1 MTR_5g073370 32.932 249 147 7 11 250 5 242 1.00e-24 101
MS.gene014840.t1 MTR_1g108820 32.389 247 146 8 11 247 8 243 1.36e-24 100
MS.gene014840.t1 MTR_7g032370 33.632 223 125 8 23 239 2 207 1.68e-24 100
MS.gene014840.t1 MTR_3g082890 36.585 205 108 7 11 205 17 209 1.81e-24 101
MS.gene014840.t1 MTR_3g082890 36.585 205 108 7 11 205 97 289 2.66e-24 101
MS.gene014840.t1 MTR_3g105060 33.333 186 118 4 11 194 14 195 2.66e-24 100
MS.gene014840.t1 MTR_7g098480 38.624 189 104 4 11 194 18 199 3.29e-24 100
MS.gene014840.t1 MTR_8g467800 34.234 222 134 6 6 221 15 230 4.95e-24 99.0
MS.gene014840.t1 MTR_3g108560 35.124 242 135 9 8 243 17 242 7.82e-24 97.8
MS.gene014840.t1 MTR_7g075800 30.515 272 153 10 10 250 8 274 8.13e-24 100
MS.gene014840.t1 MTR_3g109982 38.298 188 105 4 11 195 13 192 1.06e-23 100
MS.gene014840.t1 MTR_5g073340 32.068 237 132 6 11 247 8 215 1.17e-23 97.4
MS.gene014840.t1 MTR_3g110010 38.298 188 105 4 11 195 13 192 1.29e-23 99.8
MS.gene014840.t1 MTR_3g087260 37.433 187 92 5 11 194 12 176 1.58e-23 99.0
MS.gene014840.t1 MTR_3g108560 35.124 242 135 9 8 243 17 242 1.78e-23 98.2
MS.gene014840.t1 MTR_8g467800 34.234 222 134 6 6 221 15 230 1.86e-23 98.6
MS.gene014840.t1 MTR_3g467400 30.952 252 155 6 11 248 3 249 2.89e-23 97.1
MS.gene014840.t1 MTR_1g066830 33.333 240 142 7 11 243 8 236 3.18e-23 97.4
MS.gene014840.t1 MTR_5g061680 37.500 192 105 6 11 194 11 195 7.33e-23 95.5
MS.gene014840.t1 MTR_6g022360 34.286 245 142 5 6 248 38 265 1.08e-22 95.9
MS.gene014840.t1 MTR_3g095600 32.780 241 122 8 11 243 4 212 1.32e-22 94.4
MS.gene014840.t1 MTR_6g045333 31.429 245 146 8 11 245 61 293 1.46e-22 95.9
MS.gene014840.t1 MTR_5g008920 32.000 250 154 7 3 248 4 241 2.37e-22 94.7
MS.gene014840.t1 MTR_7g034110 36.744 215 107 8 1 200 1 201 4.84e-22 93.6
MS.gene014840.t1 MTR_4g032730 33.168 202 121 5 5 193 9 209 6.15e-22 94.4
MS.gene014840.t1 MTR_5g084070 38.265 196 102 7 11 200 13 195 8.05e-22 94.0
MS.gene014840.t1 MTR_7g033945 37.634 186 87 10 1 170 1 173 8.49e-22 89.4
MS.gene014840.t1 MTR_7g088260 32.636 239 139 7 10 243 90 311 1.09e-21 93.6
MS.gene014840.t1 MTR_7g033990 37.198 207 104 8 1 193 1 195 1.59e-21 92.8
MS.gene014840.t1 MTR_5g007410 31.799 239 148 8 13 245 28 257 3.32e-21 92.0
MS.gene014840.t1 MTR_5g045510 30.290 241 147 6 11 245 12 237 3.77e-21 91.3
MS.gene014840.t1 MTR_5g008950 32.218 239 136 9 13 243 1 221 6.75e-21 90.9
MS.gene014840.t1 MTR_7g007080 28.226 248 161 6 9 246 2 242 1.04e-20 90.5
MS.gene014840.t1 MTR_5g045170 34.286 245 140 8 13 250 16 246 1.12e-20 90.1
MS.gene014840.t1 MTR_6g022500 32.599 227 137 7 6 225 96 313 1.86e-20 90.1
MS.gene014840.t1 MTR_7g056280 36.723 177 107 3 8 180 3 178 4.90e-20 89.4
MS.gene014840.t1 MTR_1g108800 31.967 244 119 6 11 248 8 210 5.09e-20 87.8
MS.gene014840.t1 MTR_5g092960 33.054 239 143 7 3 229 11 244 8.08e-20 87.8
MS.gene014840.t1 MTR_7g033915 36.364 209 85 12 1 193 1 177 9.04e-20 87.4
MS.gene014840.t1 MTR_5g092960 33.054 239 143 7 3 229 11 244 1.21e-19 87.8
MS.gene014840.t1 MTR_8g445780 33.168 202 119 8 9 202 11 204 1.90e-19 86.7
MS.gene014840.t1 MTR_4g093690 34.328 201 102 8 11 195 18 204 1.93e-19 85.1
MS.gene014840.t1 MTR_8g468810 32.663 199 119 8 7 193 21 216 3.09e-19 85.5
MS.gene014840.t1 MTR_7g034115 38.021 192 100 7 11 193 11 192 3.12e-19 86.3
MS.gene014840.t1 MTR_8g468810 32.663 199 119 8 7 193 21 216 3.27e-19 85.5
MS.gene014840.t1 MTR_8g468810 32.663 199 119 8 7 193 21 216 5.56e-19 85.1
MS.gene014840.t1 MTR_8g468810 32.663 199 119 8 7 193 21 216 7.62e-19 85.1
MS.gene014840.t1 MTR_6g044572 32.653 245 127 7 11 222 2 241 1.00e-18 84.7
MS.gene014840.t1 MTR_6g040270 34.310 239 141 10 13 245 10 238 1.13e-18 84.3
MS.gene014840.t1 MTR_8g468810 32.338 201 121 8 5 193 19 216 1.25e-18 84.7
MS.gene014840.t1 MTR_8g058965 33.184 223 115 9 1 195 1 217 1.57e-18 84.7
MS.gene014840.t1 MTR_6g044560 32.794 247 124 8 11 222 178 417 2.02e-18 84.3
MS.gene014840.t1 MTR_3g071850 29.796 245 150 8 11 245 24 256 3.30e-18 84.0
MS.gene014840.t1 MTR_7g033470 39.130 138 45 3 11 147 14 113 3.56e-18 79.0
MS.gene014840.t1 MTR_8g014160 33.168 202 116 6 10 195 40 238 3.60e-18 83.2
MS.gene014840.t1 MTR_7g023310 31.915 188 120 5 8 192 23 205 3.87e-18 83.6
MS.gene014840.t1 MTR_8g062010 31.915 188 115 6 11 190 9 191 4.20e-18 83.2
MS.gene014840.t1 MTR_1g492880 42.718 103 53 3 8 105 3 104 5.40e-18 77.4
MS.gene014840.t1 MTR_4g056020 32.663 199 117 6 7 195 5 196 7.38e-18 82.4
MS.gene014840.t1 MTR_8g058970 31.982 222 110 10 6 193 13 227 1.13e-17 82.0
MS.gene014840.t1 MTR_1g492880 48.864 88 41 2 8 92 3 89 1.91e-17 75.5
MS.gene014840.t1 MTR_4g056030 36.139 202 102 10 7 193 5 194 2.49e-17 81.3
MS.gene014840.t1 MTR_8g062270 29.528 254 155 8 8 245 13 258 2.62e-17 80.9
MS.gene014840.t1 MTR_3g114200 36.620 142 79 5 11 148 19 153 2.63e-17 77.0
MS.gene014840.t1 MTR_8g468840 31.633 196 120 5 11 193 14 208 3.59e-17 80.5
MS.gene014840.t1 MTR_8g014260 32.178 202 123 6 8 195 13 214 4.13e-17 80.5
MS.gene014840.t1 MTR_5g082930 47.126 87 39 1 13 92 17 103 6.54e-17 77.0
MS.gene014840.t1 MTR_8g062310 32.161 199 117 9 1 193 15 201 8.88e-17 79.3
MS.gene014840.t1 MTR_5g080710 37.186 199 106 8 11 200 33 221 2.60e-16 78.2
MS.gene014840.t1 MTR_7g081290 48.780 82 39 1 8 86 15 96 2.65e-16 76.3
MS.gene014840.t1 MTR_5g039470 29.832 238 134 9 27 249 1 220 4.53e-16 76.6
MS.gene014840.t1 MTR_2g020170 40.496 121 54 6 9 120 20 131 9.75e-16 72.4
MS.gene014840.t1 MTR_4g080787 31.220 205 111 6 10 192 18 214 1.06e-15 76.3
MS.gene014840.t1 MTR_5g065100 33.891 239 129 12 16 245 13 231 1.10e-15 76.3
MS.gene014840.t1 MTR_7g033940 42.982 114 51 5 13 120 96 201 1.30e-15 73.9
MS.gene014840.t1 MTR_2g007460 36.207 116 52 3 11 121 12 110 3.83e-15 69.7
MS.gene014840.t1 MTR_5g058350 32.609 184 95 4 11 193 8 163 4.55e-15 71.6
MS.gene014840.t1 MTR_2g036470 27.347 245 157 7 11 245 14 247 8.78e-15 73.6
MS.gene014840.t1 MTR_2g099980 33.108 148 85 6 8 148 35 175 8.90e-15 73.6
MS.gene014840.t1 MTR_8g062080 34.171 199 113 10 11 199 23 213 9.08e-15 73.6
MS.gene014840.t1 MTR_5g031970 30.992 242 120 11 11 234 16 228 9.39e-15 73.2
MS.gene014840.t1 MTR_5g039450 28.049 246 142 6 11 249 6 223 1.47e-14 72.4
MS.gene014840.t1 MTR_7g021990 29.555 247 152 6 11 247 48 282 1.93e-14 72.4
MS.gene014840.t1 MTR_2g082800 33.721 172 91 7 7 168 23 181 3.10e-14 72.0
MS.gene014840.t1 MTR_7g021950 29.555 247 152 6 11 247 48 282 3.16e-14 72.0
MS.gene014840.t1 MTR_8g070950 29.612 206 123 9 8 203 12 205 3.47e-14 72.0
MS.gene014840.t1 MTR_1g011430 29.744 195 117 6 7 192 3 186 3.83e-14 71.2
MS.gene014840.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 6.68e-14 71.2
MS.gene014840.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 6.74e-14 70.9
MS.gene014840.t1 MTR_3g113782 54.000 50 23 0 8 57 14 63 7.25e-14 65.9
MS.gene014840.t1 MTR_2g100570 32.558 172 102 4 11 170 72 241 8.40e-14 70.9
MS.gene014840.t1 MTR_3g048290 29.464 224 140 6 7 222 17 230 8.78e-14 70.9
MS.gene014840.t1 MTR_8g468760 29.717 212 129 8 6 202 4 210 8.94e-14 70.5
MS.gene014840.t1 MTR_1g077420 29.480 173 106 5 11 177 4 166 9.38e-14 69.3
MS.gene014840.t1 MTR_2g007100 70.000 40 12 0 11 50 2 41 1.01e-13 65.1
MS.gene014840.t1 MTR_8g014290 31.373 153 88 5 9 145 8 159 1.03e-13 67.4
MS.gene014840.t1 MTR_4g080773 30.769 208 114 6 10 195 18 217 1.42e-13 70.1
MS.gene014840.t1 MTR_4g080773 30.769 208 114 6 10 195 18 217 1.64e-13 70.1
MS.gene014840.t1 MTR_4g024720 30.435 184 102 7 5 162 11 194 1.76e-13 67.8
MS.gene014840.t1 MTR_5g060570 32.544 169 98 9 11 173 17 175 1.81e-13 68.6
MS.gene014840.t1 MTR_5g039490 28.400 250 149 9 11 245 20 254 1.94e-13 69.3
MS.gene014840.t1 MTR_7g098590 58.333 48 20 0 11 58 18 65 3.14e-13 65.5
MS.gene014840.t1 MTR_1g095750 64.444 45 16 0 11 55 46 90 3.15e-13 65.5
MS.gene014840.t1 MTR_7g022105 26.749 243 164 6 11 247 49 283 4.38e-13 68.6
MS.gene014840.t1 MTR_8g468910 27.313 227 139 7 6 211 43 264 4.59e-13 68.6
MS.gene014840.t1 MTR_8g469020 33.173 208 111 9 11 193 7 211 5.04e-13 68.6
MS.gene014840.t1 MTR_5g021550 30.323 155 91 7 4 145 12 162 5.18e-13 65.5
MS.gene014840.t1 MTR_1g090900 32.065 184 111 8 1 178 1 176 6.08e-13 66.2
MS.gene014840.t1 MTR_4g047950 32.353 170 106 4 9 173 11 176 8.99e-13 67.4
MS.gene014840.t1 MTR_3g023270 31.844 179 104 6 7 178 6 173 9.79e-13 67.4
MS.gene014840.t1 MTR_5g039970 29.091 220 141 5 8 221 16 226 1.00e-12 67.0
MS.gene014840.t1 MTR_2g083840 30.653 199 120 7 9 193 19 213 1.28e-12 67.4
MS.gene014840.t1 MTR_2g082880 31.579 209 125 7 8 208 7 205 1.42e-12 67.0
MS.gene014840.t1 MTR_3g099900 33.146 178 99 7 6 173 13 180 1.46e-12 67.0
MS.gene014840.t1 MTR_5g005690 31.250 160 96 5 6 161 14 163 2.35e-12 66.6
MS.gene014840.t1 MTR_5g087940 30.857 175 98 7 6 173 21 179 3.14e-12 65.9
MS.gene014840.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 3.65e-12 65.9
MS.gene014840.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 3.92e-12 65.9
MS.gene014840.t1 MTR_6g022390 39.683 126 60 6 11 123 5 127 3.98e-12 62.8
MS.gene014840.t1 MTR_2g100590 29.744 195 122 5 11 193 42 233 4.02e-12 65.9
MS.gene014840.t1 MTR_8g467790 31.500 200 113 10 11 194 148 339 4.08e-12 65.9
MS.gene014840.t1 MTR_4g024770 46.429 56 30 0 5 60 18 73 4.93e-12 60.5
MS.gene014840.t1 MTR_4g050250 30.476 210 120 8 11 195 21 229 5.06e-12 65.5
MS.gene014840.t1 MTR_2g047872 26.214 206 122 7 4 193 16 207 5.14e-12 65.5
MS.gene014840.t1 MTR_2g082850 30.233 215 110 9 11 190 22 231 6.03e-12 65.1
MS.gene014840.t1 MTR_2g082860 55.102 49 22 0 11 59 27 75 6.15e-12 61.6
MS.gene014840.t1 MTR_0571s0010 41.975 81 44 1 11 88 32 112 8.05e-12 60.8
MS.gene014840.t1 MTR_7g094030 34.337 166 91 7 10 168 27 181 1.06e-11 64.7
MS.gene014840.t1 MTR_1g038710 33.333 198 107 10 11 192 19 207 1.16e-11 64.3
MS.gene014840.t1 MTR_8g062300 31.280 211 121 10 7 195 22 230 1.31e-11 64.3
MS.gene014840.t1 MTR_6g092430 28.488 172 110 3 11 173 10 177 1.39e-11 63.9
MS.gene014840.t1 MTR_3g014550 29.778 225 126 10 7 212 7 218 1.41e-11 63.9
MS.gene014840.t1 MTR_1g090883 30.964 197 122 6 7 195 15 205 1.58e-11 63.9
MS.gene014840.t1 MTR_3g023470 30.636 173 99 5 6 168 10 171 1.61e-11 63.9
MS.gene014840.t1 MTR_2g047858 29.952 207 115 9 9 198 113 306 2.51e-11 63.5
MS.gene014840.t1 MTR_5g073400 50.725 69 33 1 135 203 53 120 2.88e-11 60.1
MS.gene014840.t1 MTR_6g009020 24.747 198 123 3 2 178 7 199 3.12e-11 62.8
MS.gene014840.t1 MTR_4g014260 30.345 145 92 4 4 147 19 155 3.30e-11 62.8
MS.gene014840.t1 MTR_1g014450 27.638 199 121 7 9 192 14 204 3.67e-11 62.8
MS.gene014840.t1 MTR_3g095640 30.675 163 99 6 2 154 9 167 4.09e-11 60.5
MS.gene014840.t1 MTR_1g021825 27.805 205 120 6 2 192 8 198 4.43e-11 62.8
MS.gene014840.t1 MTR_4g032845 42.697 89 44 2 10 91 2 90 4.60e-11 62.8
MS.gene014840.t1 MTR_6g018560 38.889 90 47 2 7 94 30 113 4.92e-11 62.4
MS.gene014840.t1 MTR_6g018570 38.889 90 47 2 7 94 30 113 5.14e-11 62.4
MS.gene014840.t1 MTR_5g061410 33.500 200 99 9 16 209 10 181 5.19e-11 61.6
MS.gene014840.t1 MTR_1g021825 27.805 205 120 6 2 192 79 269 5.23e-11 62.4
MS.gene014840.t1 MTR_8g017280 27.326 172 110 5 11 174 36 200 6.65e-11 61.6
MS.gene014840.t1 MTR_4g014260 29.530 149 96 4 4 151 19 159 6.79e-11 62.0
MS.gene014840.t1 MTR_1g115250 31.081 148 89 4 7 148 28 168 6.93e-11 62.0
MS.gene014840.t1 MTR_5g063450 37.778 90 46 2 7 96 23 102 7.32e-11 62.0
MS.gene014840.t1 MTR_8g014180 60.000 40 16 0 8 47 14 53 7.39e-11 57.0
MS.gene014840.t1 MTR_8g017280 27.326 172 110 5 11 174 36 200 8.61e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014840.t1 AT1G78750 34.197 193 119 2 11 196 18 209 2.47e-24 101
MS.gene014840.t1 AT1G78750 34.197 193 119 2 11 196 18 209 2.47e-24 101
MS.gene014840.t1 AT1G16930 35.233 193 100 5 11 192 15 193 5.71e-24 100
MS.gene014840.t1 AT1G16930 35.233 193 100 5 11 192 15 193 5.71e-24 100
MS.gene014840.t1 AT1G16930 35.233 193 100 5 11 192 15 193 5.71e-24 100
MS.gene014840.t1 AT5G41840 39.109 202 98 7 11 192 14 210 1.02e-23 99.8
MS.gene014840.t1 AT1G69630 31.579 190 129 1 7 196 14 202 5.62e-23 97.4
MS.gene014840.t1 AT1G13780 31.222 221 126 6 11 216 10 219 4.06e-22 93.6
MS.gene014840.t1 AT5G53840 32.569 218 138 4 5 222 12 220 4.62e-22 94.7
MS.gene014840.t1 AT3G58860 33.190 232 130 7 6 224 2 221 5.79e-22 94.4
MS.gene014840.t1 AT4G14096 35.938 192 104 6 11 192 8 190 1.10e-21 93.6
MS.gene014840.t1 AT4G14096 35.938 192 104 6 11 192 8 190 1.10e-21 93.6
MS.gene014840.t1 AT1G13780 31.222 221 126 6 11 216 10 219 1.29e-21 93.6
MS.gene014840.t1 AT3G58940 33.043 230 124 7 11 221 2 220 4.52e-21 92.4
MS.gene014840.t1 AT3G58940 33.043 230 124 7 11 221 2 220 4.52e-21 92.4
MS.gene014840.t1 AT1G78760 32.804 189 123 3 5 192 10 195 1.08e-20 90.9
MS.gene014840.t1 AT5G22720 29.358 218 133 5 10 217 22 228 1.92e-20 90.1
MS.gene014840.t1 AT1G66310 29.474 190 122 3 7 192 15 196 2.29e-20 89.7
MS.gene014840.t1 AT3G59200 34.135 208 108 7 11 201 7 202 3.84e-20 88.6
MS.gene014840.t1 AT5G22670 31.443 194 128 3 1 194 1 189 4.40e-20 89.0
MS.gene014840.t1 AT5G53635 30.189 212 138 4 13 220 2 207 1.27e-19 87.4
MS.gene014840.t1 AT3G59200 34.135 208 108 7 11 201 7 202 1.29e-19 87.8
MS.gene014840.t1 AT5G25850 31.980 197 99 5 11 193 20 195 1.36e-19 87.8
MS.gene014840.t1 AT3G58900 32.547 212 110 6 11 203 2 199 1.46e-19 86.3
MS.gene014840.t1 AT3G58900 32.547 212 110 6 11 203 2 199 2.10e-19 85.9
MS.gene014840.t1 AT3G58900 32.547 212 110 6 11 203 2 199 2.10e-19 85.9
MS.gene014840.t1 AT5G22730 29.947 187 121 4 10 192 27 207 2.25e-19 86.7
MS.gene014840.t1 AT5G53640 29.730 185 119 5 10 192 21 196 3.03e-19 84.0
MS.gene014840.t1 AT5G22730 29.947 187 121 4 10 192 27 207 3.24e-19 86.7
MS.gene014840.t1 AT5G22730 29.947 187 121 4 10 192 27 207 3.24e-19 86.7
MS.gene014840.t1 AT1G55660 33.871 186 118 4 11 192 53 237 3.75e-19 85.9
MS.gene014840.t1 AT3G59240 31.982 222 129 8 11 221 8 218 3.89e-19 86.7
MS.gene014840.t1 AT1G55660 33.871 186 118 4 11 192 53 237 4.55e-19 86.3
MS.gene014840.t1 AT4G00315 33.511 188 116 5 11 192 2 186 4.72e-19 85.9
MS.gene014840.t1 AT4G14103 32.663 199 117 6 11 199 8 199 4.85e-19 85.9
MS.gene014840.t1 AT1G51370 31.351 185 116 5 9 192 17 191 4.95e-19 85.1
MS.gene014840.t1 AT4G14103 32.663 199 117 6 11 199 8 199 6.01e-19 85.5
MS.gene014840.t1 AT4G14103 32.663 199 117 6 11 199 8 199 6.01e-19 85.5
MS.gene014840.t1 AT4G00160 35.859 198 115 6 11 204 16 205 6.91e-19 85.5
MS.gene014840.t1 AT3G58900 32.547 212 110 6 11 203 2 199 7.68e-19 85.5
MS.gene014840.t1 AT5G27750 29.949 197 115 6 11 192 5 193 7.98e-19 85.5
MS.gene014840.t1 AT4G26340 35.294 187 109 6 11 192 2 181 8.86e-19 85.1
MS.gene014840.t1 AT5G27750 29.949 197 115 6 11 192 5 193 1.19e-18 84.3
MS.gene014840.t1 AT1G51370 31.351 185 116 5 9 192 17 191 1.24e-18 84.7
MS.gene014840.t1 AT1G51370 31.351 185 116 5 9 192 17 191 1.48e-18 84.7
MS.gene014840.t1 AT3G59190 35.096 208 109 8 2 192 3 201 1.52e-18 84.3
MS.gene014840.t1 AT4G00320 36.318 201 104 7 11 192 13 208 1.99e-18 84.3
MS.gene014840.t1 AT5G41830 34.783 230 130 7 11 222 13 240 2.14e-18 84.3
MS.gene014840.t1 AT3G03040 33.014 209 118 6 11 204 2 203 2.14e-18 84.3
MS.gene014840.t1 AT3G59190 35.096 208 109 8 2 192 3 201 2.75e-18 84.0
MS.gene014840.t1 AT4G13965 34.804 204 116 7 9 206 8 200 2.77e-18 83.6
MS.gene014840.t1 AT2G26860 34.518 197 108 7 11 195 2 189 5.74e-18 82.8
MS.gene014840.t1 AT2G26860 34.518 197 108 7 11 195 2 189 5.74e-18 82.8
MS.gene014840.t1 AT4G13985 26.923 208 139 2 1 198 9 213 8.67e-18 82.4
MS.gene014840.t1 AT2G42730 30.729 192 122 5 11 192 5 195 9.22e-18 82.4
MS.gene014840.t1 AT5G22660 28.194 227 142 7 10 229 12 224 1.12e-17 81.3
MS.gene014840.t1 AT5G56420 31.163 215 142 4 11 223 6 216 1.69e-17 81.6
MS.gene014840.t1 AT5G56420 31.163 215 142 4 11 223 6 216 1.69e-17 81.6
MS.gene014840.t1 AT5G56420 31.163 215 142 4 11 223 6 216 1.69e-17 81.6
MS.gene014840.t1 AT3G58930 31.602 231 125 8 11 221 2 219 2.26e-17 81.3
MS.gene014840.t1 AT3G58930 31.602 231 125 8 11 221 2 219 2.26e-17 81.3
MS.gene014840.t1 AT3G58930 31.602 231 125 8 11 221 2 219 2.26e-17 81.3
MS.gene014840.t1 AT5G22660 28.194 227 142 7 10 229 12 224 3.79e-17 80.5
MS.gene014840.t1 AT3G49030 35.122 205 110 7 3 196 13 205 5.20e-17 80.1
MS.gene014840.t1 AT3G49030 35.122 205 110 7 3 196 13 205 5.45e-17 80.1
MS.gene014840.t1 AT3G49150 28.992 238 142 8 4 231 9 229 6.48e-17 80.1
MS.gene014840.t1 AT5G38390 34.545 220 127 8 11 227 2 207 8.02e-17 79.7
MS.gene014840.t1 AT1G66290 28.947 190 126 3 2 190 20 201 9.91e-17 79.3
MS.gene014840.t1 AT3G60040 33.971 209 115 7 11 199 230 435 1.51e-16 79.0
MS.gene014840.t1 AT3G60040 33.971 209 115 7 11 199 232 437 1.51e-16 79.0
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 6 208 1.52e-16 79.0
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 6 208 1.52e-16 79.0
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 6 208 1.52e-16 79.0
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 6 208 1.52e-16 79.0
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 43 245 1.87e-16 78.6
MS.gene014840.t1 AT5G22700 27.619 210 142 6 11 217 43 245 1.98e-16 78.6
MS.gene014840.t1 AT3G60040 33.971 209 115 7 11 199 13 218 2.10e-16 78.6
MS.gene014840.t1 AT3G60040 33.971 209 115 7 11 199 232 437 2.29e-16 78.6
MS.gene014840.t1 AT3G60040 33.971 209 115 7 11 199 233 438 2.33e-16 78.6
MS.gene014840.t1 AT2G26030 28.745 247 159 10 11 249 4 241 2.55e-16 78.2
MS.gene014840.t1 AT2G26030 28.745 247 159 10 11 249 4 241 2.55e-16 78.2
MS.gene014840.t1 AT2G26030 28.745 247 159 10 11 249 4 241 2.60e-16 78.2
MS.gene014840.t1 AT5G38392 32.323 198 113 5 11 192 2 194 3.53e-16 75.5
MS.gene014840.t1 AT1G06630 34.135 208 116 8 6 198 7 208 3.71e-16 76.6
MS.gene014840.t1 AT5G56370 35.135 185 107 6 11 190 2 178 4.01e-16 76.6
MS.gene014840.t1 AT5G44950 30.986 213 138 5 11 221 4 209 4.22e-16 77.4
MS.gene014840.t1 AT4G22280 34.081 223 116 8 11 221 2 205 4.62e-16 76.6
MS.gene014840.t1 AT5G56370 35.135 185 107 6 11 190 2 178 5.29e-16 77.0
MS.gene014840.t1 AT5G56370 35.135 185 107 6 11 190 2 178 5.29e-16 77.0
MS.gene014840.t1 AT4G22280 34.081 223 116 8 11 221 2 205 5.45e-16 77.0
MS.gene014840.t1 AT1G06630 34.135 208 116 8 6 198 7 208 5.74e-16 76.6
MS.gene014840.t1 AT1G06630 34.135 208 116 8 6 198 7 208 5.74e-16 76.6
MS.gene014840.t1 AT4G10400 32.000 200 110 6 11 196 2 189 6.40e-16 77.0
MS.gene014840.t1 AT4G10400 32.000 200 110 6 11 196 2 189 6.40e-16 77.0
MS.gene014840.t1 AT4G10400 32.000 200 110 6 11 196 2 189 6.40e-16 77.0
MS.gene014840.t1 AT1G06630 34.135 208 116 8 6 198 16 217 6.85e-16 76.6
MS.gene014840.t1 AT1G06630 32.812 256 137 12 6 243 7 245 7.44e-16 76.6
MS.gene014840.t1 AT1G06630 32.812 256 137 12 6 243 7 245 7.44e-16 76.6
MS.gene014840.t1 AT1G06630 32.812 256 137 12 6 243 7 245 7.44e-16 76.6
MS.gene014840.t1 AT1G06630 32.812 256 137 12 6 243 7 245 7.44e-16 76.6
MS.gene014840.t1 AT1G06630 32.812 256 137 12 6 243 7 245 7.55e-16 77.0
MS.gene014840.t1 AT3G58920 30.357 224 135 8 11 220 2 218 8.13e-16 76.6
MS.gene014840.t1 AT5G56380 31.217 189 121 3 11 192 2 188 1.07e-15 76.3
MS.gene014840.t1 AT5G56380 31.217 189 121 3 11 192 2 188 1.07e-15 76.3
MS.gene014840.t1 AT3G03030 31.156 199 114 6 11 193 2 193 1.21e-15 75.5
MS.gene014840.t1 AT5G22610 29.817 218 130 7 10 216 17 222 1.30e-15 76.3
MS.gene014840.t1 AT3G03030 31.156 199 114 6 11 193 2 193 1.34e-15 76.3
MS.gene014840.t1 AT3G42770 31.841 201 114 7 16 198 4 199 1.41e-15 76.3
MS.gene014840.t1 AT4G15060 30.144 209 140 4 2 206 17 223 1.59e-15 75.9
MS.gene014840.t1 AT5G22610 30.928 194 115 6 10 192 17 202 2.02e-15 75.5
MS.gene014840.t1 AT2G04230 31.441 229 140 9 5 225 7 226 2.72e-15 75.1
MS.gene014840.t1 AT1G80470 29.947 187 124 4 9 192 13 195 3.02e-15 75.1
MS.gene014840.t1 AT2G42720 33.158 190 118 7 11 192 2 190 4.24e-15 74.7
MS.gene014840.t1 AT3G44810 30.928 194 122 3 16 199 12 203 4.62e-15 74.3
MS.gene014840.t1 AT4G09920 31.606 193 109 5 11 192 2 182 6.74e-15 73.2
MS.gene014840.t1 AT4G09920 31.606 193 109 5 11 192 2 182 6.74e-15 73.2
MS.gene014840.t1 AT4G09920 31.606 193 109 5 11 192 2 182 6.74e-15 73.2
MS.gene014840.t1 AT3G58980 29.130 230 145 8 11 232 2 221 7.13e-15 73.9
MS.gene014840.t1 AT4G09920 31.606 193 109 5 11 192 2 182 7.56e-15 73.2
MS.gene014840.t1 AT4G09920 31.606 193 109 5 11 192 2 182 7.56e-15 73.2
MS.gene014840.t1 AT5G41630 33.649 211 115 7 1 192 1 205 8.10e-15 73.9
MS.gene014840.t1 AT3G59210 30.045 223 139 5 6 217 2 218 1.56e-14 73.2
MS.gene014840.t1 AT3G59210 30.045 223 139 5 6 217 2 218 1.56e-14 73.2
MS.gene014840.t1 AT3G59210 30.045 223 139 5 6 217 2 218 1.56e-14 73.2
MS.gene014840.t1 AT3G59210 30.045 223 139 5 6 217 2 218 1.56e-14 73.2
MS.gene014840.t1 AT3G59210 30.045 223 139 5 6 217 2 218 1.56e-14 73.2
MS.gene014840.t1 AT3G51530 30.270 185 118 3 10 192 29 204 1.67e-14 72.8
MS.gene014840.t1 AT3G49040 31.282 195 120 6 8 195 14 201 1.93e-14 72.0
MS.gene014840.t1 AT5G44490 27.807 187 128 4 10 192 16 199 2.00e-14 72.8
MS.gene014840.t1 AT5G44490 27.807 187 128 4 10 192 16 199 2.16e-14 72.4
MS.gene014840.t1 AT4G15060 30.693 202 134 4 9 206 170 369 2.43e-14 72.4
MS.gene014840.t1 AT5G38396 32.000 200 111 6 11 192 2 194 2.79e-14 72.4
MS.gene014840.t1 AT3G26922 31.937 191 121 5 9 196 12 196 2.95e-14 71.2
MS.gene014840.t1 AT3G26922 31.937 191 121 5 9 196 12 196 2.95e-14 71.2
MS.gene014840.t1 AT1G66300 25.311 241 157 5 11 248 29 249 3.24e-14 72.0
MS.gene014840.t1 AT5G25860 28.390 236 134 7 11 221 12 237 3.86e-14 71.6
MS.gene014840.t1 AT5G18770 27.670 206 107 4 10 193 23 208 5.70e-14 70.9
MS.gene014840.t1 AT1G48400 32.984 191 114 6 11 192 10 195 9.42e-14 70.9
MS.gene014840.t1 AT5G18770 27.670 206 107 4 10 193 23 208 1.15e-13 70.5
MS.gene014840.t1 AT1G48400 32.984 191 114 6 11 192 10 195 1.26e-13 70.5
MS.gene014840.t1 AT3G58960 30.093 216 138 7 11 221 2 209 4.37e-13 68.6
MS.gene014840.t1 AT5G44940 31.959 194 113 9 11 193 5 190 4.84e-13 68.2
MS.gene014840.t1 AT3G44080 32.927 164 95 3 16 168 12 171 5.81e-13 68.2
MS.gene014840.t1 AT3G59230 30.693 202 112 8 11 192 12 205 7.30e-13 68.2
MS.gene014840.t1 AT1G66320 26.519 181 125 3 15 193 34 208 7.48e-13 68.2
MS.gene014840.t1 AT1G60410 34.392 189 111 6 11 192 10 192 8.65e-13 67.8
MS.gene014840.t1 AT5G56690 30.052 193 113 7 13 192 4 187 8.90e-13 67.8
MS.gene014840.t1 AT3G49480 30.556 216 118 9 10 205 11 214 9.18e-13 67.8
MS.gene014840.t1 AT3G58880 30.000 200 120 4 11 197 3 195 1.30e-12 67.4
MS.gene014840.t1 AT1G16940 27.895 190 110 8 13 192 13 185 1.73e-12 67.0
MS.gene014840.t1 AT3G44090 30.049 203 108 9 16 200 29 215 1.82e-12 67.0
MS.gene014840.t1 AT3G52680 33.000 200 117 7 11 204 21 209 2.29e-12 66.2
MS.gene014840.t1 AT3G52680 33.000 200 117 7 11 204 21 209 2.69e-12 66.2
MS.gene014840.t1 AT5G44980 31.282 195 115 9 9 193 2 187 3.71e-12 65.5
MS.gene014840.t1 AT5G44980 31.282 195 115 9 9 193 2 187 3.71e-12 65.5
MS.gene014840.t1 AT3G59150 29.911 224 134 8 11 214 13 233 3.93e-12 65.9
MS.gene014840.t1 AT4G26350 31.606 193 110 8 11 193 2 182 4.68e-12 65.5
MS.gene014840.t1 AT1G52650 29.952 207 121 7 11 203 2 198 5.49e-12 65.5
MS.gene014840.t1 AT5G56440 29.787 188 119 4 11 192 2 182 7.19e-12 65.1
MS.gene014840.t1 AT4G27050 27.143 210 117 5 9 192 2 201 7.50e-12 65.1
MS.gene014840.t1 AT4G27050 27.143 210 117 5 9 192 2 201 7.50e-12 65.1
MS.gene014840.t1 AT4G27050 27.143 210 117 5 9 192 2 201 7.50e-12 65.1
MS.gene014840.t1 AT4G27050 27.143 210 117 5 9 192 2 201 7.50e-12 65.1
MS.gene014840.t1 AT4G27050 27.143 210 117 5 9 192 2 201 7.50e-12 65.1
MS.gene014840.t1 AT5G44980 31.282 195 115 9 9 193 2 187 7.81e-12 65.1
MS.gene014840.t1 AT5G44980 31.282 195 115 9 9 193 2 187 7.81e-12 65.1
MS.gene014840.t1 AT3G56780 29.630 189 114 5 13 194 9 185 1.01e-11 64.7
MS.gene014840.t1 AT3G56780 29.947 187 112 6 13 192 9 183 1.08e-11 64.7
MS.gene014840.t1 AT3G56780 29.630 189 114 6 13 194 9 185 1.27e-11 64.3
MS.gene014840.t1 AT3G59000 29.200 250 125 8 11 218 2 241 1.32e-11 63.9
MS.gene014840.t1 AT1G60400 29.167 192 116 5 11 192 14 195 1.56e-11 63.9
MS.gene014840.t1 AT3G59000 32.044 181 99 6 11 174 2 175 1.99e-11 63.9
MS.gene014840.t1 AT3G49020 31.959 194 118 7 8 196 19 203 2.04e-11 63.5
MS.gene014840.t1 AT5G44960 31.156 199 106 9 11 193 5 188 2.67e-11 63.2
MS.gene014840.t1 AT3G44060 30.804 224 129 9 16 229 4 211 2.72e-11 63.2
MS.gene014840.t1 AT5G56820 27.979 193 110 6 11 192 15 189 2.75e-11 63.2
MS.gene014840.t1 AT1G26890 31.481 162 100 6 9 168 36 188 3.31e-11 62.8
MS.gene014840.t1 AT1G26890 31.481 162 100 6 9 168 36 188 3.31e-11 62.8
MS.gene014840.t1 AT1G26890 31.481 162 100 6 9 168 36 188 3.65e-11 62.8
MS.gene014840.t1 AT1G26890 31.481 162 100 6 9 168 36 188 3.84e-11 62.4
MS.gene014840.t1 AT1G26890 31.481 162 100 6 9 168 36 188 3.84e-11 62.4
MS.gene014840.t1 AT2G29910 28.342 187 117 6 11 191 5 180 4.75e-11 62.4
MS.gene014840.t1 AT2G29910 28.342 187 117 6 11 191 5 180 4.75e-11 62.4
MS.gene014840.t1 AT1G32375 29.187 209 135 7 11 213 2 203 4.95e-11 62.4
MS.gene014840.t1 AT1G32375 29.187 209 135 7 11 213 2 203 4.95e-11 62.4
MS.gene014840.t1 AT1G78840 31.217 189 115 6 8 192 2 179 7.29e-11 62.0
MS.gene014840.t1 AT1G78840 31.217 189 115 6 8 192 2 179 7.29e-11 62.0
MS.gene014840.t1 AT3G62430 29.730 222 133 10 11 221 2 211 8.13e-11 62.0
MS.gene014840.t1 AT3G26922 31.217 189 100 6 9 196 12 171 8.69e-11 61.2

Find 53 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATTTCATGTTGCTTT+TGG 0.258290 3.3:-87734553 MS.gene014840:CDS
ATCCTTCATCTCAGCGAATC+TGG 0.285405 3.3:-87734588 MS.gene014840:CDS
AGAATGCTAATAGGCAATTT+AGG 0.307428 3.3:+87734693 None:intergenic
GCTTGTAATTCTTCAAGAAT+TGG 0.321909 3.3:+87734522 None:intergenic
CAAGTTGACCAGAGCAGATA+TGG 0.339389 3.3:-87734427 MS.gene014840:CDS
CTCCTTGTGGATACTATGTT+TGG 0.345318 3.3:-87734723 MS.gene014840:CDS
ACTAGTGGCAACAGCTTGTT+TGG 0.346707 3.3:+87734992 None:intergenic
TGAAGCGAAAACAGGCTTCT+TGG 0.348544 3.3:+87734895 None:intergenic
GCTTTCCCCATGTCGTCAAA+TGG 0.354659 3.3:-87734785 MS.gene014840:CDS
TTTGAGGCAGGGAAGTCTAA+TGG 0.397366 3.3:+87734611 None:intergenic
CAAAGAGGTGGATACATCTA+TGG 0.400880 3.3:-87734962 MS.gene014840:CDS
GAATTACAAGCACATCATAT+AGG 0.404564 3.3:-87734510 MS.gene014840:CDS
TTGCAGCTGAGAATGCTAAT+AGG 0.416238 3.3:+87734684 None:intergenic
TATGGTGAGGAGGGCATCAT+TGG 0.429607 3.3:-87734807 MS.gene014840:CDS
TGATAGGATCAGCAATTTAC+CGG 0.433335 3.3:-87735051 MS.gene014840:CDS
CGGATAACGACGATGATGAT+AGG 0.457013 3.3:-87735067 MS.gene014840:CDS
GTGGCAACAGCTTGTTTGGT+AGG 0.461291 3.3:+87734996 None:intergenic
GGACTCGCTGAAGCGAAAAC+AGG 0.467256 3.3:+87734887 None:intergenic
CTTTCCCCATGTCGTCAAAT+GGG 0.468994 3.3:-87734784 MS.gene014840:CDS
TCCTTCATCTCAGCGAATCT+GGG 0.469230 3.3:-87734587 MS.gene014840:CDS
ATTTCAGCGTTTCTCTGTGA+AGG 0.471581 3.3:-87734643 MS.gene014840:CDS
AAAGCAAACCATATCTGCTC+TGG 0.480362 3.3:+87734419 None:intergenic
ACCCAGATTCGCTGAGATGA+AGG 0.480843 3.3:+87734586 None:intergenic
GGAGTTTCTCTGCATACAAA+TGG 0.501972 3.3:-87734361 MS.gene014840:CDS
GTTGACGGCACTTCGTAATG+TGG 0.508436 3.3:-87734382 MS.gene014840:CDS
GGTTGACCCATTTGACGACA+TGG 0.535346 3.3:+87734778 None:intergenic
TTTCAGCGTTTCTCTGTGAA+GGG 0.536823 3.3:-87734642 MS.gene014840:CDS
CTTGTGGATACTATGTTTGG+TGG 0.538965 3.3:-87734720 MS.gene014840:CDS
GTGGATACTATGTTTGGTGG+TGG 0.544877 3.3:-87734717 MS.gene014840:CDS
TGGCAACAGCTTGTTTGGTA+GGG 0.545166 3.3:+87734997 None:intergenic
ATATGACAGATGAGAGTCTC+CGG 0.553457 3.3:+87735032 None:intergenic
AGTATCCACAAGGAGATCAA+TGG 0.564849 3.3:+87734731 None:intergenic
ATCAGAAATGTCATCAGTTG+CGG 0.565869 3.3:-87735087 None:intergenic
TCATATAGGTTTCAGATCTG+AGG 0.571902 3.3:-87734496 MS.gene014840:CDS
GATGTATCCACCTCTTTGCA+AGG 0.575620 3.3:+87734967 None:intergenic
CCTTGGGATTACATATGGTG+AGG 0.576166 3.3:-87734820 MS.gene014840:CDS
ACATTACGAAGTGCCGTCAA+CGG 0.581351 3.3:+87734384 None:intergenic
GGGATTACATATGGTGAGGA+GGG 0.588914 3.3:-87734816 MS.gene014840:CDS
CAACACCGCTTTGTACAACA+TGG 0.589951 3.3:+87734757 None:intergenic
TTGACCCATTTGACGACATG+GGG 0.593485 3.3:+87734780 None:intergenic
GTTGACCCATTTGACGACAT+GGG 0.598506 3.3:+87734779 None:intergenic
TGGGATTACATATGGTGAGG+AGG 0.606014 3.3:-87734817 MS.gene014840:CDS
CTAGTGTCCTTGCAAAGAGG+TGG 0.606905 3.3:-87734974 MS.gene014840:CDS
CCTCTTTGCAAGGACACTAG+TGG 0.630257 3.3:+87734977 None:intergenic
TCTCTGCATACAAATGGACG+AGG 0.632893 3.3:-87734355 MS.gene014840:CDS
CCACTAGTGTCCTTGCAAAG+AGG 0.639831 3.3:-87734977 MS.gene014840:CDS
CCTCACCATATGTAATCCCA+AGG 0.641476 3.3:+87734820 None:intergenic
CACCAAACATAGTATCCACA+AGG 0.642253 3.3:+87734721 None:intergenic
TGAGACCATTGATCTCCTTG+TGG 0.646015 3.3:-87734736 MS.gene014840:CDS
CTGAAATTTGAGAACAACAA+GGG 0.665662 3.3:+87734659 None:intergenic
TGAAAGCAAAACAGAATACA+CGG 0.666578 3.3:+87734866 None:intergenic
GTCAACCATGTTGTACAAAG+CGG 0.687677 3.3:-87734762 MS.gene014840:CDS
GCTGAAATTTGAGAACAACA+AGG 0.765708 3.3:+87734658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AGAATGCTAATAGGCAATTT+AGG + chr3.3:87734740-87734759 None:intergenic 30.0%
CTGAAATTTGAGAACAACAA+GGG + chr3.3:87734774-87734793 None:intergenic 30.0%
GAATTACAAGCACATCATAT+AGG - chr3.3:87734920-87734939 MS.gene014840:CDS 30.0%
GCTTGTAATTCTTCAAGAAT+TGG + chr3.3:87734911-87734930 None:intergenic 30.0%
TGAAAGCAAAACAGAATACA+CGG + chr3.3:87734567-87734586 None:intergenic 30.0%
!!! TCAAGATTTCATGTTGCTTT+TGG - chr3.3:87734877-87734896 MS.gene014840:CDS 30.0%
!!! TTATTGTCATTTTCCGTTGA+CGG - chr3.3:87735033-87735052 MS.gene014840:CDS 30.0%
GCTGAAATTTGAGAACAACA+AGG + chr3.3:87734775-87734794 None:intergenic 35.0%
TCATATAGGTTTCAGATCTG+AGG - chr3.3:87734934-87734953 MS.gene014840:CDS 35.0%
TGATAGGATCAGCAATTTAC+CGG - chr3.3:87734379-87734398 MS.gene014840:CDS 35.0%
! CCATCAAAAGTTTTTGCCTT+GGG - chr3.3:87734594-87734613 MS.gene014840:CDS 35.0%
! TCCATCAAAAGTTTTTGCCT+TGG - chr3.3:87734593-87734612 MS.gene014840:CDS 35.0%
! TTTTGCCTTGGGATTACATA+TGG - chr3.3:87734605-87734624 MS.gene014840:CDS 35.0%
!!! GATTTCATGTTGCTTTTGGT+TGG - chr3.3:87734881-87734900 MS.gene014840:CDS 35.0%
AAAGCAAACCATATCTGCTC+TGG + chr3.3:87735014-87735033 None:intergenic 40.0%
AGTATCCACAAGGAGATCAA+TGG + chr3.3:87734702-87734721 None:intergenic 40.0%
ATATGACAGATGAGAGTCTC+CGG + chr3.3:87734401-87734420 None:intergenic 40.0%
ATTTCAGCGTTTCTCTGTGA+AGG - chr3.3:87734787-87734806 MS.gene014840:CDS 40.0%
CAAAGAGGTGGATACATCTA+TGG - chr3.3:87734468-87734487 MS.gene014840:CDS 40.0%
CACCAAACATAGTATCCACA+AGG + chr3.3:87734712-87734731 None:intergenic 40.0%
CTCCTTGTGGATACTATGTT+TGG - chr3.3:87734707-87734726 MS.gene014840:CDS 40.0%
CTTGTGGATACTATGTTTGG+TGG - chr3.3:87734710-87734729 MS.gene014840:CDS 40.0%
GGAGTTTCTCTGCATACAAA+TGG - chr3.3:87735069-87735088 MS.gene014840:CDS 40.0%
GTCAACCATGTTGTACAAAG+CGG - chr3.3:87734668-87734687 MS.gene014840:CDS 40.0%
TTGCAGCTGAGAATGCTAAT+AGG + chr3.3:87734749-87734768 None:intergenic 40.0%
TTTCAGCGTTTCTCTGTGAA+GGG - chr3.3:87734788-87734807 MS.gene014840:CDS 40.0%
! CCCAAGGCAAAAACTTTTGA+TGG + chr3.3:87734597-87734616 None:intergenic 40.0%
!!! AGATGAAGGATTTTGAGGCA+GGG + chr3.3:87734833-87734852 None:intergenic 40.0%
ATCCTTCATCTCAGCGAATC+TGG - chr3.3:87734842-87734861 MS.gene014840:CDS 45.0%
CAACACCGCTTTGTACAACA+TGG + chr3.3:87734676-87734695 None:intergenic 45.0%
CCTCACCATATGTAATCCCA+AGG + chr3.3:87734613-87734632 None:intergenic 45.0%
CCTTGGGATTACATATGGTG+AGG - chr3.3:87734610-87734629 MS.gene014840:CDS 45.0%
CGGATAACGACGATGATGAT+AGG - chr3.3:87734363-87734382 MS.gene014840:CDS 45.0%
CTTTCCCCATGTCGTCAAAT+GGG - chr3.3:87734646-87734665 MS.gene014840:CDS 45.0%
GATGTATCCACCTCTTTGCA+AGG + chr3.3:87734466-87734485 None:intergenic 45.0%
GGGATTACATATGGTGAGGA+GGG - chr3.3:87734614-87734633 MS.gene014840:CDS 45.0%
GTTGACCCATTTGACGACAT+GGG + chr3.3:87734654-87734673 None:intergenic 45.0%
TCCTTCATCTCAGCGAATCT+GGG - chr3.3:87734843-87734862 MS.gene014840:CDS 45.0%
TCTCTGCATACAAATGGACG+AGG - chr3.3:87735075-87735094 MS.gene014840:CDS 45.0%
TGAAGCGAAAACAGGCTTCT+TGG + chr3.3:87734538-87734557 None:intergenic 45.0%
TGAGACCATTGATCTCCTTG+TGG - chr3.3:87734694-87734713 MS.gene014840:CDS 45.0%
TGGGATTACATATGGTGAGG+AGG - chr3.3:87734613-87734632 MS.gene014840:CDS 45.0%
TTGACCCATTTGACGACATG+GGG + chr3.3:87734653-87734672 None:intergenic 45.0%
! ACTAGTGGCAACAGCTTGTT+TGG + chr3.3:87734441-87734460 None:intergenic 45.0%
! CAAGTTGACCAGAGCAGATA+TGG - chr3.3:87735003-87735022 MS.gene014840:CDS 45.0%
! CGCTGAGATGAAGGATTTTG+AGG + chr3.3:87734838-87734857 None:intergenic 45.0%
! GTGGATACTATGTTTGGTGG+TGG - chr3.3:87734713-87734732 MS.gene014840:CDS 45.0%
! TGGCAACAGCTTGTTTGGTA+GGG + chr3.3:87734436-87734455 None:intergenic 45.0%
! TTTGAGGCAGGGAAGTCTAA+TGG + chr3.3:87734822-87734841 None:intergenic 45.0%
!! ACATTACGAAGTGCCGTCAA+CGG + chr3.3:87735049-87735068 None:intergenic 45.0%
!!! GAGATGAAGGATTTTGAGGC+AGG + chr3.3:87734834-87734853 None:intergenic 45.0%
ACCCAGATTCGCTGAGATGA+AGG + chr3.3:87734847-87734866 None:intergenic 50.0%
CCACTAGTGTCCTTGCAAAG+AGG - chr3.3:87734453-87734472 MS.gene014840:CDS 50.0%
CCTCTTTGCAAGGACACTAG+TGG + chr3.3:87734456-87734475 None:intergenic 50.0%
CTAGTGTCCTTGCAAAGAGG+TGG - chr3.3:87734456-87734475 MS.gene014840:CDS 50.0%
GCTTTCCCCATGTCGTCAAA+TGG - chr3.3:87734645-87734664 MS.gene014840:CDS 50.0%
GGTTGACCCATTTGACGACA+TGG + chr3.3:87734655-87734674 None:intergenic 50.0%
GTTGACGGCACTTCGTAATG+TGG - chr3.3:87735048-87735067 MS.gene014840:CDS 50.0%
! GTGGCAACAGCTTGTTTGGT+AGG + chr3.3:87734437-87734456 None:intergenic 50.0%
!! TATGGTGAGGAGGGCATCAT+TGG - chr3.3:87734623-87734642 MS.gene014840:CDS 50.0%
GGACTCGCTGAAGCGAAAAC+AGG + chr3.3:87734546-87734565 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 87734350 87735102 87734350 ID=MS.gene014840
chr3.3 mRNA 87734350 87735102 87734350 ID=MS.gene014840.t1;Parent=MS.gene014840
chr3.3 exon 87734350 87735102 87734350 ID=MS.gene014840.t1.exon1;Parent=MS.gene014840.t1
chr3.3 CDS 87734350 87735102 87734350 ID=cds.MS.gene014840.t1;Parent=MS.gene014840.t1
Gene Sequence

>MS.gene014840

ATGTCATCAGTTGCGGATAACGACGATGATGATAGGATCAGCAATTTACCGGAGACTCTCATCTGTCATATTCTCTCTTTTCTCCCTACCAAACAAGCTGTTGCCACTAGTGTCCTTGCAAAGAGGTGGATACATCTATGGTGCTCAGTTCTTGCGATCAACTTCAGCAACACAGAGCTATATCACCAAGAAGCCTGTTTTCGCTTCAGCGAGTCCGTGTATTCTGTTTTGCTTTCACGTAATTCCATCAAAAGTTTTTGCCTTGGGATTACATATGGTGAGGAGGGCATCATTGGCTTTCCCCATGTCGTCAAATGGGTCAACCATGTTGTACAAAGCGGTGTTGAGACCATTGATCTCCTTGTGGATACTATGTTTGGTGGTGGTCCTAAATTGCCTATTAGCATTCTCAGCTGCAAGACCCTTGTTGTTCTCAAATTTCAGCGTTTCTCTGTGAAGGGCTTTTCTTCCATTAGACTTCCCTGCCTCAAAATCCTTCATCTCAGCGAATCTGGGTTTTTTAATATTCAAGATTTCATGTTGCTTTTGGTTGGATGTCCAATTCTTGAAGAATTACAAGCACATCATATAGGTTTCAGATCTGAGGATTCTCTTACATATCAAGAGCGTAATAGCTCAAGCTTAAGTTTAAGCAAGTTGACCAGAGCAGATATGGTTTGCTTTTATTGTCATTTTCCGTTGACGGCACTTCGTAATGTGGAGTTTCTCTGCATACAAATGGACGAGGTTTGA

Protein sequence

>MS.gene014840.t1

MSSVADNDDDDRISNLPETLICHILSFLPTKQAVATSVLAKRWIHLWCSVLAINFSNTELYHQEACFRFSESVYSVLLSRNSIKSFCLGITYGEEGIIGFPHVVKWVNHVVQSGVETIDLLVDTMFGGGPKLPISILSCKTLVVLKFQRFSVKGFSSIRLPCLKILHLSESGFFNIQDFMLLLVGCPILEELQAHHIGFRSEDSLTYQERNSSSLSLSKLTRADMVCFYCHFPLTALRNVEFLCIQMDEV