Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97355.t1 | GAU25865.1 | 51.9 | 287 | 124 | 6 | 4 | 284 | 54 | 332 | 8.00E-67 | 264.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97355.t1 | Q8H1R7 | 26.7 | 311 | 165 | 12 | 11 | 272 | 58 | 354 | 7.2e-08 | 59.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97355.t1 | A0A2Z6MQH4 | 51.9 | 287 | 124 | 6 | 4 | 284 | 54 | 332 | 5.8e-67 | 264.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97355.t1 | MTR_7g034090 | 48.000 | 300 | 70 | 10 | 4 | 300 | 60 | 276 | 6.12e-68 | 219 |
MS.gene97355.t1 | MTR_3g107120 | 41.993 | 281 | 130 | 10 | 11 | 279 | 79 | 338 | 3.50e-48 | 167 |
MS.gene97355.t1 | MTR_3g107160 | 38.000 | 300 | 163 | 8 | 7 | 297 | 63 | 348 | 1.83e-47 | 164 |
MS.gene97355.t1 | MTR_2g007450 | 38.264 | 311 | 147 | 10 | 5 | 281 | 69 | 368 | 5.87e-47 | 164 |
MS.gene97355.t1 | MTR_3g107100 | 40.645 | 310 | 145 | 14 | 5 | 300 | 63 | 347 | 2.15e-43 | 154 |
MS.gene97355.t1 | MTR_1g053025 | 38.000 | 300 | 153 | 12 | 1 | 281 | 52 | 337 | 1.16e-39 | 144 |
MS.gene97355.t1 | MTR_2g007400 | 33.442 | 308 | 163 | 10 | 4 | 286 | 63 | 353 | 2.77e-35 | 132 |
MS.gene97355.t1 | MTR_3g026920 | 35.621 | 306 | 132 | 9 | 10 | 277 | 76 | 354 | 3.89e-35 | 132 |
MS.gene97355.t1 | MTR_2g007500 | 34.483 | 290 | 143 | 10 | 4 | 275 | 65 | 325 | 1.09e-32 | 124 |
MS.gene97355.t1 | MTR_4g098590 | 35.211 | 284 | 153 | 9 | 9 | 275 | 55 | 324 | 6.92e-32 | 122 |
MS.gene97355.t1 | MTR_7g075820 | 31.138 | 334 | 186 | 11 | 3 | 311 | 56 | 370 | 2.05e-31 | 122 |
MS.gene97355.t1 | MTR_7g034120 | 34.317 | 271 | 147 | 11 | 19 | 277 | 1 | 252 | 2.55e-29 | 114 |
MS.gene97355.t1 | MTR_2g008320 | 34.386 | 285 | 157 | 12 | 4 | 277 | 103 | 368 | 3.03e-29 | 117 |
MS.gene97355.t1 | MTR_7g007080 | 33.935 | 277 | 163 | 7 | 11 | 279 | 62 | 326 | 9.51e-28 | 112 |
MS.gene97355.t1 | MTR_2g005990 | 31.153 | 321 | 179 | 13 | 2 | 300 | 58 | 358 | 5.85e-27 | 109 |
MS.gene97355.t1 | MTR_2g008310 | 33.447 | 293 | 144 | 9 | 4 | 277 | 53 | 313 | 9.93e-27 | 109 |
MS.gene97355.t1 | MTR_3g107140 | 47.333 | 150 | 68 | 5 | 4 | 147 | 52 | 196 | 2.82e-26 | 103 |
MS.gene97355.t1 | MTR_5g083890 | 32.258 | 341 | 179 | 16 | 4 | 311 | 57 | 378 | 3.41e-26 | 108 |
MS.gene97355.t1 | MTR_7g083740 | 31.900 | 279 | 148 | 10 | 4 | 277 | 68 | 309 | 4.64e-26 | 107 |
MS.gene97355.t1 | MTR_7g033915 | 32.014 | 278 | 142 | 10 | 11 | 278 | 66 | 306 | 9.72e-26 | 105 |
MS.gene97355.t1 | MTR_7g055943 | 32.384 | 281 | 166 | 9 | 7 | 280 | 94 | 357 | 1.73e-25 | 106 |
MS.gene97355.t1 | MTR_3g099830 | 31.579 | 323 | 171 | 11 | 4 | 311 | 63 | 350 | 2.64e-25 | 105 |
MS.gene97355.t1 | MTR_5g058000 | 33.808 | 281 | 157 | 9 | 4 | 279 | 59 | 315 | 8.26e-25 | 103 |
MS.gene97355.t1 | MTR_1g107385 | 33.430 | 344 | 171 | 18 | 1 | 311 | 81 | 399 | 3.32e-24 | 102 |
MS.gene97355.t1 | MTR_7g098570 | 32.765 | 293 | 168 | 11 | 2 | 286 | 68 | 339 | 3.79e-24 | 102 |
MS.gene97355.t1 | MTR_5g058100 | 32.000 | 275 | 166 | 9 | 10 | 279 | 66 | 324 | 1.35e-23 | 100 |
MS.gene97355.t1 | MTR_7g056433 | 32.746 | 284 | 152 | 11 | 11 | 277 | 67 | 328 | 4.67e-23 | 99.0 |
MS.gene97355.t1 | MTR_7g033990 | 30.847 | 295 | 157 | 12 | 2 | 278 | 59 | 324 | 4.74e-23 | 99.4 |
MS.gene97355.t1 | MTR_1g041245 | 31.000 | 300 | 177 | 14 | 11 | 300 | 66 | 345 | 2.01e-22 | 97.1 |
MS.gene97355.t1 | MTR_3g040700 | 33.333 | 285 | 146 | 13 | 4 | 275 | 91 | 344 | 2.92e-22 | 97.1 |
MS.gene97355.t1 | MTR_7g098480 | 34.915 | 295 | 157 | 14 | 5 | 286 | 63 | 335 | 3.20e-22 | 97.4 |
MS.gene97355.t1 | MTR_7g032370 | 30.796 | 289 | 154 | 11 | 11 | 288 | 45 | 298 | 3.63e-22 | 95.9 |
MS.gene97355.t1 | MTR_4g039440 | 30.249 | 281 | 169 | 10 | 10 | 279 | 86 | 350 | 4.27e-22 | 96.7 |
MS.gene97355.t1 | MTR_0009s0080 | 34.420 | 276 | 164 | 9 | 11 | 279 | 76 | 341 | 6.71e-22 | 95.9 |
MS.gene97355.t1 | MTR_3g108150 | 33.571 | 280 | 156 | 12 | 11 | 279 | 68 | 328 | 1.17e-21 | 95.1 |
MS.gene97355.t1 | MTR_1g085120 | 31.802 | 283 | 173 | 9 | 4 | 279 | 143 | 412 | 1.23e-21 | 95.5 |
MS.gene97355.t1 | MTR_7g088260 | 31.507 | 292 | 164 | 13 | 11 | 290 | 146 | 413 | 1.31e-21 | 95.5 |
MS.gene97355.t1 | MTR_1g108820 | 30.405 | 296 | 155 | 9 | 4 | 277 | 59 | 325 | 1.77e-21 | 94.4 |
MS.gene97355.t1 | MTR_1g085120 | 31.802 | 283 | 173 | 9 | 4 | 279 | 218 | 487 | 1.79e-21 | 95.5 |
MS.gene97355.t1 | MTR_5g073420 | 33.096 | 281 | 156 | 11 | 10 | 285 | 69 | 322 | 3.90e-21 | 93.6 |
MS.gene97355.t1 | MTR_1g066830 | 31.884 | 276 | 169 | 7 | 10 | 279 | 65 | 327 | 4.33e-21 | 93.2 |
MS.gene97355.t1 | MTR_7g098510 | 30.241 | 291 | 162 | 10 | 11 | 286 | 73 | 337 | 4.90e-21 | 93.2 |
MS.gene97355.t1 | MTR_6g045333 | 31.481 | 270 | 169 | 9 | 17 | 279 | 127 | 387 | 8.41e-21 | 93.2 |
MS.gene97355.t1 | MTR_6g022360 | 34.188 | 234 | 135 | 8 | 11 | 236 | 88 | 310 | 8.51e-21 | 92.8 |
MS.gene97355.t1 | MTR_5g045170 | 32.340 | 235 | 139 | 8 | 50 | 277 | 109 | 330 | 1.88e-20 | 91.7 |
MS.gene97355.t1 | MTR_5g007410 | 30.508 | 236 | 152 | 5 | 48 | 279 | 122 | 349 | 2.26e-20 | 91.7 |
MS.gene97355.t1 | MTR_5g073340 | 30.932 | 236 | 146 | 7 | 46 | 274 | 75 | 300 | 2.94e-20 | 89.7 |
MS.gene97355.t1 | MTR_5g061680 | 34.632 | 231 | 113 | 7 | 11 | 236 | 67 | 264 | 3.30e-20 | 90.1 |
MS.gene97355.t1 | MTR_6g011460 | 32.862 | 283 | 165 | 11 | 4 | 280 | 97 | 360 | 6.66e-20 | 90.1 |
MS.gene97355.t1 | MTR_7g075800 | 29.964 | 277 | 138 | 11 | 50 | 281 | 104 | 369 | 8.72e-20 | 90.5 |
MS.gene97355.t1 | MTR_6g022500 | 31.159 | 276 | 165 | 10 | 10 | 279 | 161 | 417 | 9.10e-20 | 90.1 |
MS.gene97355.t1 | MTR_6g040270 | 28.938 | 273 | 171 | 9 | 11 | 279 | 66 | 319 | 2.17e-19 | 88.2 |
MS.gene97355.t1 | MTR_3g036250 | 32.982 | 285 | 148 | 13 | 4 | 275 | 53 | 307 | 3.15e-19 | 87.8 |
MS.gene97355.t1 | MTR_0492s0020 | 32.000 | 275 | 163 | 9 | 10 | 281 | 140 | 393 | 5.05e-19 | 87.8 |
MS.gene97355.t1 | MTR_2g036470 | 31.120 | 241 | 142 | 8 | 46 | 277 | 110 | 335 | 5.58e-19 | 87.4 |
MS.gene97355.t1 | MTR_0543s0010 | 32.000 | 275 | 163 | 9 | 10 | 281 | 140 | 393 | 6.35e-19 | 87.4 |
MS.gene97355.t1 | MTR_1g085120 | 31.579 | 247 | 155 | 7 | 4 | 243 | 230 | 469 | 7.20e-19 | 87.4 |
MS.gene97355.t1 | MTR_3g071850 | 29.537 | 281 | 180 | 9 | 7 | 279 | 80 | 350 | 8.50e-19 | 87.8 |
MS.gene97355.t1 | MTR_1089s0010 | 29.137 | 278 | 174 | 8 | 24 | 297 | 77 | 335 | 9.78e-19 | 86.7 |
MS.gene97355.t1 | MTR_7g032380 | 29.577 | 284 | 142 | 12 | 11 | 284 | 66 | 301 | 6.15e-18 | 84.0 |
MS.gene97355.t1 | MTR_7g007340 | 33.333 | 228 | 118 | 8 | 68 | 286 | 105 | 307 | 2.41e-17 | 82.4 |
MS.gene97355.t1 | MTR_7g115270 | 29.514 | 288 | 165 | 10 | 11 | 275 | 67 | 339 | 6.00e-17 | 81.3 |
MS.gene97355.t1 | MTR_7g026500 | 30.108 | 279 | 136 | 14 | 27 | 277 | 89 | 336 | 7.21e-17 | 81.3 |
MS.gene97355.t1 | MTR_2g007360 | 29.293 | 297 | 157 | 10 | 5 | 286 | 64 | 322 | 7.34e-17 | 80.9 |
MS.gene97355.t1 | MTR_3g108560 | 29.710 | 276 | 175 | 7 | 9 | 281 | 73 | 332 | 8.91e-17 | 80.9 |
MS.gene97355.t1 | MTR_5g031970 | 28.520 | 277 | 159 | 8 | 8 | 279 | 55 | 297 | 9.21e-17 | 80.5 |
MS.gene97355.t1 | MTR_1g108820 | 30.534 | 262 | 139 | 8 | 4 | 243 | 59 | 299 | 9.63e-17 | 80.5 |
MS.gene97355.t1 | MTR_3g082890 | 29.966 | 297 | 167 | 10 | 5 | 275 | 143 | 424 | 2.16e-16 | 80.1 |
MS.gene97355.t1 | MTR_5g076150 | 35.359 | 181 | 96 | 6 | 75 | 238 | 26 | 202 | 4.23e-16 | 77.0 |
MS.gene97355.t1 | MTR_7g056280 | 30.729 | 192 | 108 | 7 | 122 | 297 | 367 | 549 | 4.54e-16 | 79.3 |
MS.gene97355.t1 | MTR_7g034115 | 30.872 | 298 | 167 | 15 | 4 | 287 | 59 | 331 | 8.31e-16 | 77.8 |
MS.gene97355.t1 | MTR_3g106960 | 34.483 | 174 | 99 | 6 | 128 | 297 | 1 | 163 | 9.73e-16 | 75.9 |
MS.gene97355.t1 | MTR_2g007550 | 28.571 | 315 | 128 | 10 | 10 | 304 | 71 | 308 | 2.23e-15 | 76.3 |
MS.gene97355.t1 | MTR_7g056430 | 30.882 | 272 | 148 | 9 | 11 | 275 | 64 | 302 | 5.43e-15 | 76.6 |
MS.gene97355.t1 | MTR_7g056420 | 30.882 | 272 | 148 | 9 | 11 | 275 | 64 | 302 | 5.62e-15 | 76.3 |
MS.gene97355.t1 | MTR_6g022520 | 31.128 | 257 | 161 | 7 | 27 | 279 | 10 | 254 | 1.16e-14 | 73.9 |
MS.gene97355.t1 | MTR_7g056287 | 31.047 | 277 | 162 | 13 | 9 | 279 | 60 | 313 | 2.00e-14 | 73.9 |
MS.gene97355.t1 | MTR_5g073370 | 32.864 | 213 | 123 | 7 | 69 | 278 | 126 | 321 | 2.24e-14 | 73.6 |
MS.gene97355.t1 | MTR_3g082890 | 29.389 | 262 | 152 | 8 | 5 | 243 | 63 | 314 | 3.75e-14 | 73.2 |
MS.gene97355.t1 | MTR_7g056277 | 29.964 | 277 | 165 | 12 | 9 | 279 | 316 | 569 | 5.50e-14 | 73.2 |
MS.gene97355.t1 | MTR_5g039470 | 29.787 | 235 | 139 | 9 | 49 | 272 | 79 | 298 | 1.08e-13 | 71.2 |
MS.gene97355.t1 | MTR_3g108560 | 28.992 | 238 | 154 | 6 | 9 | 243 | 73 | 298 | 1.85e-13 | 70.5 |
MS.gene97355.t1 | MTR_3g087260 | 31.330 | 233 | 144 | 7 | 53 | 281 | 180 | 400 | 3.04e-13 | 70.5 |
MS.gene97355.t1 | MTR_1g108800 | 31.489 | 235 | 133 | 8 | 50 | 277 | 69 | 282 | 5.82e-13 | 69.3 |
MS.gene97355.t1 | MTR_2g007090 | 30.876 | 217 | 115 | 8 | 86 | 300 | 74 | 257 | 1.11e-12 | 67.8 |
MS.gene97355.t1 | MTR_3g023630 | 29.818 | 275 | 161 | 11 | 11 | 275 | 63 | 315 | 2.00e-12 | 67.8 |
MS.gene97355.t1 | MTR_7g007370 | 34.463 | 177 | 92 | 7 | 71 | 242 | 94 | 251 | 5.86e-12 | 66.2 |
MS.gene97355.t1 | MTR_5g013500 | 29.054 | 296 | 162 | 13 | 11 | 289 | 50 | 314 | 6.29e-12 | 66.2 |
MS.gene97355.t1 | MTR_5g039450 | 28.000 | 250 | 132 | 11 | 49 | 287 | 100 | 312 | 8.70e-12 | 65.9 |
MS.gene97355.t1 | MTR_5g045510 | 30.802 | 237 | 131 | 9 | 46 | 277 | 103 | 311 | 1.05e-11 | 65.5 |
MS.gene97355.t1 | MTR_3g105060 | 25.448 | 279 | 178 | 7 | 4 | 275 | 59 | 314 | 1.25e-11 | 65.5 |
MS.gene97355.t1 | MTR_7g056020 | 31.250 | 208 | 124 | 6 | 75 | 279 | 124 | 315 | 9.38e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 66 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAATTCTTGAGGACTTAT+TGG | 0.128488 | 7.4:+66538668 | MS.gene97355:CDS |
CCCTTCGTTTGAAACATATT+TGG | 0.157179 | 7.4:+66538604 | MS.gene97355:CDS |
CTCGTGGTTCTCAAGCTTTC+GGG | 0.160326 | 7.4:+66538531 | MS.gene97355:CDS |
CCGTCGTGGTTGGCAATTCT+TGG | 0.203311 | 7.4:+66539049 | MS.gene97355:CDS |
AACATGAAATCTCGATCTTT+TGG | 0.204094 | 7.4:-66538630 | None:intergenic |
CGAAGTCGTTAAAGCGAAAA+AGG | 0.213979 | 7.4:-66538311 | None:intergenic |
TCGTCTGATGTTTCTTCGTC+TGG | 0.218602 | 7.4:-66539237 | None:intergenic |
CCTCGTGGTTCTCAAGCTTT+CGG | 0.233020 | 7.4:+66538530 | MS.gene97355:CDS |
GAGATTTCATGTTAATTATA+AGG | 0.234912 | 7.4:+66538640 | MS.gene97355:CDS |
CTACTCAACATAAGCCTAAA+AGG | 0.260287 | 7.4:+66539333 | MS.gene97355:CDS |
GCCAATAAGTCCTCAAGAAT+TGG | 0.295840 | 7.4:-66538669 | None:intergenic |
CACAAGACGGAAAGTCTTAA+TGG | 0.305748 | 7.4:-66538370 | None:intergenic |
CCAATTGGAAACACTGTTAC+TGG | 0.310443 | 7.4:-66538418 | None:intergenic |
TGCTTGCTTCTTACTGTGAT+TGG | 0.314247 | 7.4:+66539018 | MS.gene97355:CDS |
AGATTTCATGTTAATTATAA+GGG | 0.317896 | 7.4:+66538641 | MS.gene97355:CDS |
CCTTCAGCTCCATGCGTATA+CGG | 0.337103 | 7.4:+66538473 | MS.gene97355:CDS |
CCAGTAACAGTGTTTCCAAT+TGG | 0.390722 | 7.4:+66538418 | MS.gene97355:CDS |
CAGCACAAGGTTGACCCAAT+TGG | 0.404373 | 7.4:-66538433 | None:intergenic |
TGTCGTTAAGAATCGGCTTC+AGG | 0.413597 | 7.4:+66540072 | MS.gene97355:CDS |
TCAAAAGTTTGACGTTGATC+AGG | 0.424661 | 7.4:+66539100 | MS.gene97355:CDS |
TAATGGGAAGTGCGGGATCT+CGG | 0.428894 | 7.4:-66538353 | None:intergenic |
CTTGGTAATTGATGACGAAC+AGG | 0.430400 | 7.4:+66538839 | MS.gene97355:CDS |
CAGTAACAGTGTTTCCAATT+GGG | 0.431458 | 7.4:+66538419 | MS.gene97355:CDS |
CGTCTGATGTTTCTTCGTCT+GGG | 0.433931 | 7.4:-66539236 | None:intergenic |
TTTATAATGTCGTTAAGAAT+CGG | 0.439906 | 7.4:+66540065 | MS.gene97355:CDS |
ACAAGACGGAAAGTCTTAAT+GGG | 0.444634 | 7.4:-66538369 | None:intergenic |
TCTGCAATTGAGAATATTGA+TGG | 0.446166 | 7.4:-66538505 | None:intergenic |
CCAATAAGTCCTCAAGAATT+GGG | 0.451282 | 7.4:-66538668 | None:intergenic |
TTCAGAGGTAAGAGATTGGT+TGG | 0.464597 | 7.4:-66538715 | None:intergenic |
AATGGGAAGTGCGGGATCTC+GGG | 0.465859 | 7.4:-66538352 | None:intergenic |
CCAAATATGTTTCAAACGAA+GGG | 0.471416 | 7.4:-66538604 | None:intergenic |
CAATTGGAAACACTGTTACT+GGG | 0.480998 | 7.4:-66538417 | None:intergenic |
TCCAAATATGTTTCAAACGA+AGG | 0.482448 | 7.4:-66538605 | None:intergenic |
ACTCTTCAGAGGTAAGAGAT+TGG | 0.485105 | 7.4:-66538719 | None:intergenic |
TATAAACAAGCATGGGATAG+AGG | 0.492886 | 7.4:-66540048 | None:intergenic |
ATAATCACTTGCAAGTATGC+AGG | 0.497310 | 7.4:+66541122 | MS.gene97355:CDS |
GGCATTCTCTCCGTCGTGGT+TGG | 0.497400 | 7.4:+66539039 | MS.gene97355:CDS |
ATATGTACGGTCTCTGCGCT+TGG | 0.527573 | 7.4:+66538821 | MS.gene97355:CDS |
GAGGTAAGAGATTGGTTGGA+AGG | 0.533290 | 7.4:-66538711 | None:intergenic |
AACGACATTATAAACAAGCA+TGG | 0.538128 | 7.4:-66540056 | None:intergenic |
AATTGGAAACACTGTTACTG+GGG | 0.548293 | 7.4:-66538416 | None:intergenic |
AAAGTCTTAATGGGAAGTGC+GGG | 0.563841 | 7.4:-66538360 | None:intergenic |
AAGGGGATGCCCAATTCTTG+AGG | 0.564365 | 7.4:+66538659 | MS.gene97355:CDS |
TGAAAGCAGTTCAATATGTA+CGG | 0.572292 | 7.4:+66538808 | MS.gene97355:CDS |
GATTAAAATGGTACACAAGA+CGG | 0.575494 | 7.4:-66538383 | None:intergenic |
CGAAGATTATTTGATAGTCA+CGG | 0.579664 | 7.4:+66539266 | MS.gene97355:CDS |
CAACTCCACGTTGCAGCACA+AGG | 0.583108 | 7.4:-66538446 | None:intergenic |
GATTTCATGTTAATTATAAG+GGG | 0.584396 | 7.4:+66538642 | MS.gene97355:CDS |
CCGTATACGCATGGAGCTGA+AGG | 0.590886 | 7.4:-66538473 | None:intergenic |
ATGTTCGAAGGTGTAATGAA+AGG | 0.597357 | 7.4:-66539305 | None:intergenic |
ACGACATTATAAACAAGCAT+GGG | 0.603153 | 7.4:-66540055 | None:intergenic |
AATCTCTTACCTCTGAAGAG+TGG | 0.612728 | 7.4:+66538721 | MS.gene97355:CDS |
CTGCAATTGAGAATATTGAT+GGG | 0.613718 | 7.4:-66538504 | None:intergenic |
GAAAGTCTTAATGGGAAGTG+CGG | 0.618903 | 7.4:-66538361 | None:intergenic |
GTAAAGACACCGTATACGCA+TGG | 0.638278 | 7.4:-66538482 | None:intergenic |
TGAGTAGATTGCATGTTCGA+AGG | 0.654459 | 7.4:-66539317 | None:intergenic |
TGGAAACACTGTTACTGGGG+GGG | 0.665337 | 7.4:-66538413 | None:intergenic |
CCAAGAATTGCCAACCACGA+CGG | 0.671329 | 7.4:-66539049 | None:intergenic |
ATTGGAAACACTGTTACTGG+GGG | 0.673016 | 7.4:-66538415 | None:intergenic |
TCTCAATTGCAGAACCCTCG+TGG | 0.673056 | 7.4:+66538515 | MS.gene97355:CDS |
GATTGGCATTCTCTCCGTCG+TGG | 0.674053 | 7.4:+66539035 | MS.gene97355:CDS |
TTGGAAACACTGTTACTGGG+GGG | 0.678544 | 7.4:-66538414 | None:intergenic |
GTCAACCTTGTGCTGCAACG+TGG | 0.686340 | 7.4:+66538441 | MS.gene97355:CDS |
CGAAAGCTTGAGAACCACGA+GGG | 0.721360 | 7.4:-66538529 | None:intergenic |
CCGAAAGCTTGAGAACCACG+AGG | 0.731959 | 7.4:-66538530 | None:intergenic |
AGGTGTAATGAAAGGCAATG+CGG | 0.741413 | 7.4:-66539297 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTACAAATAAGAAAA+AGG | - | chr7.4:66539626-66539645 | None:intergenic | 10.0% |
!! | AGATTTCATGTTAATTATAA+GGG | + | chr7.4:66538641-66538660 | MS.gene97355:CDS | 15.0% |
!! | TATTAACAATTAATGCTATA+TGG | - | chr7.4:66540785-66540804 | None:intergenic | 15.0% |
!! | AAATGTTACATATATTTGTC+AGG | - | chr7.4:66539677-66539696 | None:intergenic | 20.0% |
!! | ACCATAAACTATTAGAAATA+AGG | - | chr7.4:66538932-66538951 | None:intergenic | 20.0% |
!! | AGTTGGAATAAATTTCAATT+AGG | + | chr7.4:66540911-66540930 | MS.gene97355:intron | 20.0% |
!! | ATCAATAGTAAAAGGAAAAA+AGG | - | chr7.4:66540943-66540962 | None:intergenic | 20.0% |
!! | ATTAGTACTATGTTTATACA+TGG | + | chr7.4:66540702-66540721 | MS.gene97355:intron | 20.0% |
!! | GAGATTTCATGTTAATTATA+AGG | + | chr7.4:66538640-66538659 | MS.gene97355:CDS | 20.0% |
!! | GATTTCATGTTAATTATAAG+GGG | + | chr7.4:66538642-66538661 | MS.gene97355:CDS | 20.0% |
!! | TGCAAATGTATGATAAAATT+AGG | - | chr7.4:66539768-66539787 | None:intergenic | 20.0% |
!! | TGTGTCAAATTATGAAAAAT+AGG | - | chr7.4:66538993-66539012 | None:intergenic | 20.0% |
!! | TTAGTACTATGTTTATACAT+GGG | + | chr7.4:66540703-66540722 | MS.gene97355:intron | 20.0% |
!! | TTCTATGATTGAAATCATAA+CGG | + | chr7.4:66540867-66540886 | MS.gene97355:intron | 20.0% |
!! | TTTATAATGTCGTTAAGAAT+CGG | + | chr7.4:66540065-66540084 | MS.gene97355:CDS | 20.0% |
!!! | AAACAAATTCTAGTTTTTGT+TGG | - | chr7.4:66539727-66539746 | None:intergenic | 20.0% |
!!! | ACCTTATTTCTAATAGTTTA+TGG | + | chr7.4:66538928-66538947 | MS.gene97355:intron | 20.0% |
!!! | AGAATGCTAAATATTTGTTT+TGG | + | chr7.4:66540321-66540340 | MS.gene97355:intron | 20.0% |
!!! | AGCACAAAATTTTATTTCAA+AGG | - | chr7.4:66540529-66540548 | None:intergenic | 20.0% |
!!! | GATAATAGACTTTTTATTTC+AGG | - | chr7.4:66539435-66539454 | None:intergenic | 20.0% |
!!! | TTTCTGAAATCAATAGTAAA+AGG | - | chr7.4:66540951-66540970 | None:intergenic | 20.0% |
! | AACAATTAATGCTATATGGA+TGG | - | chr7.4:66540781-66540800 | None:intergenic | 25.0% |
! | ACAATTAATGCTATATGGAT+GGG | - | chr7.4:66540780-66540799 | None:intergenic | 25.0% |
! | AGTTTGGAGAGAAAATAAAA+TGG | - | chr7.4:66540448-66540467 | None:intergenic | 25.0% |
! | ATAAAAAAGCAATAAGATCG+TGG | + | chr7.4:66540351-66540370 | MS.gene97355:intron | 25.0% |
! | ATGTATGATAAAATTAGGAG+TGG | - | chr7.4:66539763-66539782 | None:intergenic | 25.0% |
! | GAATTTCAAATTCAAGCAAA+AGG | + | chr7.4:66540570-66540589 | MS.gene97355:intron | 25.0% |
! | GTTTGGAGAGAAAATAAAAT+GGG | - | chr7.4:66540447-66540466 | None:intergenic | 25.0% |
! | TGATATAGAAAAGAACAAGT+TGG | + | chr7.4:66540894-66540913 | MS.gene97355:intron | 25.0% |
! | TTAACTTCTACTATGCAATT+TGG | + | chr7.4:66539535-66539554 | MS.gene97355:intron | 25.0% |
! | TTTCATATAGTTTGACATGT+TGG | + | chr7.4:66541018-66541037 | MS.gene97355:intron | 25.0% |
!!! | ACTATTGATTTCAGAAAACA+GGG | + | chr7.4:66540954-66540973 | MS.gene97355:intron | 25.0% |
!!! | ATATTTTTGATTGTTAGAGC+AGG | + | chr7.4:66540013-66540032 | MS.gene97355:intron | 25.0% |
!!! | TACTATTGATTTCAGAAAAC+AGG | + | chr7.4:66540953-66540972 | MS.gene97355:intron | 25.0% |
AAAACATAAGGTTCTTCATG+AGG | - | chr7.4:66540403-66540422 | None:intergenic | 30.0% | |
AACGACATTATAAACAAGCA+TGG | - | chr7.4:66540059-66540078 | None:intergenic | 30.0% | |
AAGTTAAGTAAACTAGAGGA+AGG | - | chr7.4:66539522-66539541 | None:intergenic | 30.0% | |
ACATATATTTGTCAGGTACA+AGG | - | chr7.4:66539670-66539689 | None:intergenic | 30.0% | |
ACGACATTATAAACAAGCAT+GGG | - | chr7.4:66540058-66540077 | None:intergenic | 30.0% | |
AGAAAAAGGAAAGCAATTAC+TGG | - | chr7.4:66539612-66539631 | None:intergenic | 30.0% | |
ATATAGTTTGACATGTTGGA+AGG | + | chr7.4:66541022-66541041 | MS.gene97355:intron | 30.0% | |
CAGTTTCATACTGTATTACT+CGG | + | chr7.4:66541069-66541088 | MS.gene97355:intron | 30.0% | |
CATATATTTGTCAGGTACAA+GGG | - | chr7.4:66539669-66539688 | None:intergenic | 30.0% | |
CATTTAACACAATGGTGTTT+AGG | - | chr7.4:66540484-66540503 | None:intergenic | 30.0% | |
CCAAATATGTTTCAAACGAA+GGG | - | chr7.4:66538607-66538626 | None:intergenic | 30.0% | |
CTAAACACCATTGTGTTAAA+TGG | + | chr7.4:66540482-66540501 | MS.gene97355:intron | 30.0% | |
CTGCAATTGAGAATATTGAT+GGG | - | chr7.4:66538507-66538526 | None:intergenic | 30.0% | |
GATAAAATTAGGAGTGGAAA+AGG | - | chr7.4:66539757-66539776 | None:intergenic | 30.0% | |
GATTAAAATGGTACACAAGA+CGG | - | chr7.4:66538386-66538405 | None:intergenic | 30.0% | |
GTAGAAGTTAAGTAAACTAG+AGG | - | chr7.4:66539526-66539545 | None:intergenic | 30.0% | |
TATAGTTTGACATGTTGGAA+GGG | + | chr7.4:66541023-66541042 | MS.gene97355:intron | 30.0% | |
TCCAAATATGTTTCAAACGA+AGG | - | chr7.4:66538608-66538627 | None:intergenic | 30.0% | |
TCTGCAATTGAGAATATTGA+TGG | - | chr7.4:66538508-66538527 | None:intergenic | 30.0% | |
TCTTCTTGGATTATAAAGAC+AGG | - | chr7.4:66540821-66540840 | None:intergenic | 30.0% | |
TGAAAGCAGTTCAATATGTA+CGG | + | chr7.4:66538808-66538827 | MS.gene97355:CDS | 30.0% | |
! | AACATGAAATCTCGATCTTT+TGG | - | chr7.4:66538633-66538652 | None:intergenic | 30.0% |
! | ACATGAAATCTCGATCTTTT+GGG | - | chr7.4:66538632-66538651 | None:intergenic | 30.0% |
! | AGGAGTTTTCAACAATAGTT+TGG | - | chr7.4:66540464-66540483 | None:intergenic | 30.0% |
! | CAAGTACTACAAAGTTTTAC+CGG | + | chr7.4:66540220-66540239 | MS.gene97355:intron | 30.0% |
! | CATAGTAATGCTTTATTCAC+CGG | - | chr7.4:66540242-66540261 | None:intergenic | 30.0% |
! | CGAAGATTATTTGATAGTCA+CGG | + | chr7.4:66539266-66539285 | MS.gene97355:CDS | 30.0% |
! | GGTGAATAAAGCATTACTAT+GGG | + | chr7.4:66540241-66540260 | MS.gene97355:intron | 30.0% |
! | TCATGAAGAACCTTATGTTT+TGG | + | chr7.4:66540402-66540421 | MS.gene97355:intron | 30.0% |
! | TTTATGGTTCTGCATATTCT+AGG | + | chr7.4:66538944-66538963 | MS.gene97355:intron | 30.0% |
!! | GAACTTTGAGATCATTAACT+TGG | + | chr7.4:66539570-66539589 | MS.gene97355:intron | 30.0% |
!! | GACAATAGTTTGTTAGTAAG+AGG | + | chr7.4:66539990-66540009 | MS.gene97355:intron | 30.0% |
AAGCATTACTATGGGACTTT+AGG | + | chr7.4:66540249-66540268 | MS.gene97355:intron | 35.0% | |
AATGAGAAAGAAGTTGAGAG+CGG | - | chr7.4:66539808-66539827 | None:intergenic | 35.0% | |
AATTGGAAACACTGTTACTG+GGG | - | chr7.4:66538419-66538438 | None:intergenic | 35.0% | |
ACAAGACGGAAAGTCTTAAT+GGG | - | chr7.4:66538372-66538391 | None:intergenic | 35.0% | |
AGATACTATCTTCTTCCGTT+TGG | - | chr7.4:66539870-66539889 | None:intergenic | 35.0% | |
ATAATCACTTGCAAGTATGC+AGG | + | chr7.4:66541122-66541141 | MS.gene97355:CDS | 35.0% | |
ATCATAGAACTCATCAACTC+AGG | - | chr7.4:66540856-66540875 | None:intergenic | 35.0% | |
CAATTGGAAACACTGTTACT+GGG | - | chr7.4:66538420-66538439 | None:intergenic | 35.0% | |
CAGTAACAGTGTTTCCAATT+GGG | + | chr7.4:66538419-66538438 | MS.gene97355:CDS | 35.0% | |
CATAGACCATCCAAAACATA+AGG | - | chr7.4:66540415-66540434 | None:intergenic | 35.0% | |
CCAATAAGTCCTCAAGAATT+GGG | - | chr7.4:66538671-66538690 | None:intergenic | 35.0% | |
CGAGTAATACAGTATGAAAC+TGG | - | chr7.4:66541071-66541090 | None:intergenic | 35.0% | |
CTACTCAACATAAGCCTAAA+AGG | + | chr7.4:66539333-66539352 | MS.gene97355:CDS | 35.0% | |
GAAGTCGTTAAAGCGAAAAA+GGG | - | chr7.4:66538313-66538332 | None:intergenic | 35.0% | |
GATGAAGTATGGGTTCATAT+TGG | + | chr7.4:66540121-66540140 | MS.gene97355:intron | 35.0% | |
GGAAAAATGCATGATCTTCT+TGG | - | chr7.4:66540835-66540854 | None:intergenic | 35.0% | |
GGACAAACCATTTAACACAA+TGG | - | chr7.4:66540492-66540511 | None:intergenic | 35.0% | |
TATAAACAAGCATGGGATAG+AGG | - | chr7.4:66540051-66540070 | None:intergenic | 35.0% | |
TCAAAAGTTTGACGTTGATC+AGG | + | chr7.4:66539100-66539119 | MS.gene97355:CDS | 35.0% | |
! | ATGTTCGAAGGTGTAATGAA+AGG | - | chr7.4:66539308-66539327 | None:intergenic | 35.0% |
! | ATTCTGAAGGGAAACTTGTT+AGG | + | chr7.4:66539967-66539986 | MS.gene97355:intron | 35.0% |
! | CCCTTCGTTTGAAACATATT+TGG | + | chr7.4:66538604-66538623 | MS.gene97355:CDS | 35.0% |
! | CGGTGAATAAAGCATTACTA+TGG | + | chr7.4:66540240-66540259 | MS.gene97355:intron | 35.0% |
!! | GAAGAACCTTATGTTTTGGA+TGG | + | chr7.4:66540406-66540425 | MS.gene97355:intron | 35.0% |
!! | GATGACATGCTTACTTTTCA+CGG | + | chr7.4:66540985-66541004 | MS.gene97355:intron | 35.0% |
!! | TCAAAGGATTCTAAGATACG+AGG | - | chr7.4:66540513-66540532 | None:intergenic | 35.0% |
!! | TTCTGAAGGGAAACTTGTTA+GGG | + | chr7.4:66539968-66539987 | MS.gene97355:intron | 35.0% |
!! | TTTCTAGTTTGACCAATGCA+TGG | - | chr7.4:66539894-66539913 | None:intergenic | 35.0% |
!!! | AAACGAAGGGTTTTAAGAGA+AGG | - | chr7.4:66538594-66538613 | None:intergenic | 35.0% |
!!! | ACGTCAAACTTTTGAAGCTT+AGG | - | chr7.4:66539095-66539114 | None:intergenic | 35.0% |
!!! | ACTTTTGAAGCTTAGGACAA+TGG | - | chr7.4:66539088-66539107 | None:intergenic | 35.0% |
!!! | TTTTGTTGGTGATACAATGC+TGG | - | chr7.4:66539713-66539732 | None:intergenic | 35.0% |
AAGTGCAACTTGCACAAACT+AGG | - | chr7.4:66540750-66540769 | None:intergenic | 40.0% | |
ACTCTTCAGAGGTAAGAGAT+TGG | - | chr7.4:66538722-66538741 | None:intergenic | 40.0% | |
AGATAGTATCTGCCATGCAT+TGG | + | chr7.4:66539879-66539898 | MS.gene97355:intron | 40.0% | |
AGCAATAAGATCGTGGAGAA+AGG | + | chr7.4:66540358-66540377 | MS.gene97355:intron | 40.0% | |
AGGTGTAATGAAAGGCAATG+CGG | - | chr7.4:66539300-66539319 | None:intergenic | 40.0% | |
ATTGGAAACACTGTTACTGG+GGG | - | chr7.4:66538418-66538437 | None:intergenic | 40.0% | |
CACAAGACGGAAAGTCTTAA+TGG | - | chr7.4:66538373-66538392 | None:intergenic | 40.0% | |
CCAATTGGAAACACTGTTAC+TGG | - | chr7.4:66538421-66538440 | None:intergenic | 40.0% | |
CCAGTAACAGTGTTTCCAAT+TGG | + | chr7.4:66538418-66538437 | MS.gene97355:CDS | 40.0% | |
CCCAATTCTTGAGGACTTAT+TGG | + | chr7.4:66538668-66538687 | MS.gene97355:CDS | 40.0% | |
CGAAGTCGTTAAAGCGAAAA+AGG | - | chr7.4:66538314-66538333 | None:intergenic | 40.0% | |
CTCATTTATACCCCTTCAGT+AGG | - | chr7.4:66540619-66540638 | None:intergenic | 40.0% | |
GAAAGTCTTAATGGGAAGTG+CGG | - | chr7.4:66538364-66538383 | None:intergenic | 40.0% | |
GCCAATAAGTCCTCAAGAAT+TGG | - | chr7.4:66538672-66538691 | None:intergenic | 40.0% | |
GGCTTAGACATCATTCTGAA+GGG | + | chr7.4:66539955-66539974 | MS.gene97355:intron | 40.0% | |
TCAGGTACAAGGGATTAACA+TGG | - | chr7.4:66539659-66539678 | None:intergenic | 40.0% | |
TCTATTATCCTCATGCCCAA+GGG | + | chr7.4:66539446-66539465 | MS.gene97355:intron | 40.0% | |
TGAGTAGATTGCATGTTCGA+AGG | - | chr7.4:66539320-66539339 | None:intergenic | 40.0% | |
TGCTTGCTTCTTACTGTGAT+TGG | + | chr7.4:66539018-66539037 | MS.gene97355:CDS | 40.0% | |
TTCAGAGGTAAGAGATTGGT+TGG | - | chr7.4:66538718-66538737 | None:intergenic | 40.0% | |
TTCATACTGTATTACTCGGC+AGG | + | chr7.4:66541073-66541092 | MS.gene97355:intron | 40.0% | |
TTGGTGGAAGGCTAAACTTT+GGG | + | chr7.4:66540639-66540658 | MS.gene97355:intron | 40.0% | |
! | AAAGCTTTTCCACTCTTCAG+AGG | - | chr7.4:66538733-66538752 | None:intergenic | 40.0% |
! | AAAGTCTTAATGGGAAGTGC+GGG | - | chr7.4:66538363-66538382 | None:intergenic | 40.0% |
! | AAGGGGTATAAATGAGTTGG+TGG | + | chr7.4:66540623-66540642 | MS.gene97355:intron | 40.0% |
! | AATCTCTTACCTCTGAAGAG+TGG | + | chr7.4:66538721-66538740 | MS.gene97355:CDS | 40.0% |
! | CTAGCGTAAGCTTACCTTTT+AGG | - | chr7.4:66539350-66539369 | None:intergenic | 40.0% |
! | CTGAAGGGGTATAAATGAGT+TGG | + | chr7.4:66540620-66540639 | MS.gene97355:intron | 40.0% |
!! | CTAAGCCCATTAGCTTGTTT+GGG | - | chr7.4:66539942-66539961 | None:intergenic | 40.0% |
!! | CTTGGTAATTGATGACGAAC+AGG | + | chr7.4:66538839-66538858 | MS.gene97355:CDS | 40.0% |
!! | GGTATAAATGAGTTGGTGGA+AGG | + | chr7.4:66540627-66540646 | MS.gene97355:intron | 40.0% |
!! | TCTAAGCCCATTAGCTTGTT+TGG | - | chr7.4:66539943-66539962 | None:intergenic | 40.0% |
!!! | TCGGGTTTTATTGTGCAAGT+GGG | + | chr7.4:66538549-66538568 | MS.gene97355:CDS | 40.0% |
!!! | TTCGGGTTTTATTGTGCAAG+TGG | + | chr7.4:66538548-66538567 | MS.gene97355:CDS | 40.0% |
AAACTGGTAGCAAACACCAC+TGG | - | chr7.4:66541055-66541074 | None:intergenic | 45.0% | |
AAGGTAAGCTTACGCTAGCA+AGG | + | chr7.4:66539352-66539371 | MS.gene97355:intron | 45.0% | |
ACCATGACAATCTCGAACAG+AGG | + | chr7.4:66539405-66539424 | MS.gene97355:intron | 45.0% | |
ATCTCGCCCAAACAAGCTAA+TGG | + | chr7.4:66539933-66539952 | MS.gene97355:intron | 45.0% | |
ATCTTCTTCCGTTTGGCAGA+AGG | - | chr7.4:66539863-66539882 | None:intergenic | 45.0% | |
CGTCTGATGTTTCTTCGTCT+GGG | - | chr7.4:66539239-66539258 | None:intergenic | 45.0% | |
GGGCTTAGACATCATTCTGA+AGG | + | chr7.4:66539954-66539973 | MS.gene97355:intron | 45.0% | |
GGGGGTGAGGTAGATTAAAA+TGG | - | chr7.4:66538398-66538417 | None:intergenic | 45.0% | |
GTAAAGACACCGTATACGCA+TGG | - | chr7.4:66538485-66538504 | None:intergenic | 45.0% | |
GTCTATTATCCTCATGCCCA+AGG | + | chr7.4:66539445-66539464 | MS.gene97355:intron | 45.0% | |
TCAAGCAAAAGGCAAAGCCA+TGG | + | chr7.4:66540581-66540600 | MS.gene97355:intron | 45.0% | |
TCCTCTGTTCGAGATTGTCA+TGG | - | chr7.4:66539409-66539428 | None:intergenic | 45.0% | |
TCGTCTGATGTTTCTTCGTC+TGG | - | chr7.4:66539240-66539259 | None:intergenic | 45.0% | |
TCTCGCCCAAACAAGCTAAT+GGG | + | chr7.4:66539934-66539953 | MS.gene97355:intron | 45.0% | |
TCTTCTTCCGTTTGGCAGAA+GGG | - | chr7.4:66539862-66539881 | None:intergenic | 45.0% | |
TTGGAAACACTGTTACTGGG+GGG | - | chr7.4:66538417-66538436 | None:intergenic | 45.0% | |
! | GAGGTAAGAGATTGGTTGGA+AGG | - | chr7.4:66538714-66538733 | None:intergenic | 45.0% |
! | GTTGGTGGAAGGCTAAACTT+TGG | + | chr7.4:66540638-66540657 | MS.gene97355:intron | 45.0% |
! | TGTCGTTAAGAATCGGCTTC+AGG | + | chr7.4:66540072-66540091 | MS.gene97355:CDS | 45.0% |
! | TTCTTCATGAGGAGAAGCGT+AGG | - | chr7.4:66540392-66540411 | None:intergenic | 45.0% |
!! | GGACAGGGTTGATGAAGTAT+GGG | + | chr7.4:66540111-66540130 | MS.gene97355:intron | 45.0% |
!!! | CGGGTTTTATTGTGCAAGTG+GGG | + | chr7.4:66538550-66538569 | MS.gene97355:CDS | 45.0% |
!!! | TCAGGCTGAGTTTTGTTGGT+GGG | + | chr7.4:66540090-66540109 | MS.gene97355:CDS | 45.0% |
!!! | TGAGTTTTGTTGGTGGGACA+GGG | + | chr7.4:66540096-66540115 | MS.gene97355:CDS | 45.0% |
!!! | TTCAGGCTGAGTTTTGTTGG+TGG | + | chr7.4:66540089-66540108 | MS.gene97355:CDS | 45.0% |
AAGGGGATGCCCAATTCTTG+AGG | + | chr7.4:66538659-66538678 | MS.gene97355:CDS | 50.0% | |
ATATGTACGGTCTCTGCGCT+TGG | + | chr7.4:66538821-66538840 | MS.gene97355:CDS | 50.0% | |
CAGCACAAGGTTGACCCAAT+TGG | - | chr7.4:66538436-66538455 | None:intergenic | 50.0% | |
CCAAGAATTGCCAACCACGA+CGG | - | chr7.4:66539052-66539071 | None:intergenic | 50.0% | |
CCTCGTGGTTCTCAAGCTTT+CGG | + | chr7.4:66538530-66538549 | MS.gene97355:CDS | 50.0% | |
CCTTCAGCTCCATGCGTATA+CGG | + | chr7.4:66538473-66538492 | MS.gene97355:CDS | 50.0% | |
CGAAAGCTTGAGAACCACGA+GGG | - | chr7.4:66538532-66538551 | None:intergenic | 50.0% | |
CGTAAGTTTACACGCTGCAG+AGG | - | chr7.4:66539472-66539491 | None:intergenic | 50.0% | |
CGTGGTGATACCTACTGAAG+GGG | + | chr7.4:66540606-66540625 | MS.gene97355:intron | 50.0% | |
CTCGTGGTTCTCAAGCTTTC+GGG | + | chr7.4:66538531-66538550 | MS.gene97355:CDS | 50.0% | |
CTTCTTCCGTTTGGCAGAAG+GGG | - | chr7.4:66539861-66539880 | None:intergenic | 50.0% | |
GAAAGAAGTTGAGAGCGGAG+TGG | - | chr7.4:66539803-66539822 | None:intergenic | 50.0% | |
GCGTGGTGATACCTACTGAA+GGG | + | chr7.4:66540605-66540624 | MS.gene97355:intron | 50.0% | |
TCTCAATTGCAGAACCCTCG+TGG | + | chr7.4:66538515-66538534 | MS.gene97355:CDS | 50.0% | |
TGGAAACACTGTTACTGGGG+GGG | - | chr7.4:66538416-66538435 | None:intergenic | 50.0% | |
TGGGCGAGATGAATTGACGT+AGG | - | chr7.4:66539923-66539942 | None:intergenic | 50.0% | |
! | GTTGGAAGGGTATGTTCCAG+TGG | + | chr7.4:66541036-66541055 | MS.gene97355:intron | 50.0% |
! | TAATGGGAAGTGCGGGATCT+CGG | - | chr7.4:66538356-66538375 | None:intergenic | 50.0% |
!! | GGCTTCAGGCTGAGTTTTGT+TGG | + | chr7.4:66540086-66540105 | MS.gene97355:CDS | 50.0% |
!! | GGGACAGGGTTGATGAAGTA+TGG | + | chr7.4:66540110-66540129 | MS.gene97355:intron | 50.0% |
!!! | CTGAGTTTTGTTGGTGGGAC+AGG | + | chr7.4:66540095-66540114 | MS.gene97355:CDS | 50.0% |
CAACTCCACGTTGCAGCACA+AGG | - | chr7.4:66538449-66538468 | None:intergenic | 55.0% | |
CCGAAAGCTTGAGAACCACG+AGG | - | chr7.4:66538533-66538552 | None:intergenic | 55.0% | |
CCGTATACGCATGGAGCTGA+AGG | - | chr7.4:66538476-66538495 | None:intergenic | 55.0% | |
CCGTCGTGGTTGGCAATTCT+TGG | + | chr7.4:66539049-66539068 | MS.gene97355:CDS | 55.0% | |
CGCGTGGTGATACCTACTGA+AGG | + | chr7.4:66540604-66540623 | MS.gene97355:intron | 55.0% | |
GATTGGCATTCTCTCCGTCG+TGG | + | chr7.4:66539035-66539054 | MS.gene97355:CDS | 55.0% | |
GTCAACCTTGTGCTGCAACG+TGG | + | chr7.4:66538441-66538460 | MS.gene97355:CDS | 55.0% | |
TGCACTCCCCTTCTGCCAAA+CGG | + | chr7.4:66539852-66539871 | MS.gene97355:intron | 55.0% | |
! | AATGGGAAGTGCGGGATCTC+GGG | - | chr7.4:66538355-66538374 | None:intergenic | 55.0% |
! | TTTGGCAGAAGGGGAGTGCA+TGG | - | chr7.4:66539852-66539871 | None:intergenic | 55.0% |
AAAGGCAAAGCCATGGCGCG+TGG | + | chr7.4:66540588-66540607 | MS.gene97355:intron | 60.0% | |
ACACTGTTACTGGGGGGGTG+AGG | - | chr7.4:66538411-66538430 | None:intergenic | 60.0% | |
GGCATTCTCTCCGTCGTGGT+TGG | + | chr7.4:66539039-66539058 | MS.gene97355:CDS | 60.0% | |
GTAGGTATCACCACGCGCCA+TGG | - | chr7.4:66540601-66540620 | None:intergenic | 60.0% | |
TACACGCTGCAGAGGCCCTT+GGG | - | chr7.4:66539464-66539483 | None:intergenic | 60.0% | |
TTACACGCTGCAGAGGCCCT+TGG | - | chr7.4:66539465-66539484 | None:intergenic | 60.0% | |
TGCAGAGGCCCTTGGGCATG+AGG | - | chr7.4:66539457-66539476 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 66538291 | 66541154 | 66538291 | ID=MS.gene97355 |
chr7.4 | mRNA | 66538291 | 66541154 | 66538291 | ID=MS.gene97355.t1;Parent=MS.gene97355 |
chr7.4 | exon | 66538291 | 66538860 | 66538291 | ID=MS.gene97355.t1.exon1;Parent=MS.gene97355.t1 |
chr7.4 | CDS | 66538291 | 66538860 | 66538291 | ID=cds.MS.gene97355.t1;Parent=MS.gene97355.t1 |
chr7.4 | exon | 66538966 | 66539121 | 66538966 | ID=MS.gene97355.t1.exon2;Parent=MS.gene97355.t1 |
chr7.4 | CDS | 66538966 | 66539121 | 66538966 | ID=cds.MS.gene97355.t1;Parent=MS.gene97355.t1 |
chr7.4 | exon | 66539231 | 66539354 | 66539231 | ID=MS.gene97355.t1.exon3;Parent=MS.gene97355.t1 |
chr7.4 | CDS | 66539231 | 66539354 | 66539231 | ID=cds.MS.gene97355.t1;Parent=MS.gene97355.t1 |
chr7.4 | exon | 66540035 | 66540126 | 66540035 | ID=MS.gene97355.t1.exon4;Parent=MS.gene97355.t1 |
chr7.4 | CDS | 66540035 | 66540126 | 66540035 | ID=cds.MS.gene97355.t1;Parent=MS.gene97355.t1 |
chr7.4 | exon | 66541095 | 66541154 | 66541095 | ID=MS.gene97355.t1.exon5;Parent=MS.gene97355.t1 |
chr7.4 | CDS | 66541095 | 66541154 | 66541095 | ID=cds.MS.gene97355.t1;Parent=MS.gene97355.t1 |
Gene Sequence |
Protein sequence |