Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065234.t1 | XP_003596703.1 | 90.2 | 356 | 35 | 0 | 1 | 356 | 102 | 457 | 1.30E-179 | 639 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065234.t1 | Q8H1R7 | 31.3 | 348 | 212 | 12 | 18 | 356 | 90 | 419 | 2.2e-23 | 111.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065234.t1 | G7IM68 | 90.2 | 356 | 35 | 0 | 1 | 356 | 102 | 457 | 9.2e-180 | 639.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065234.t1 | MTR_2g083840 | 90.169 | 356 | 35 | 0 | 1 | 356 | 102 | 457 | 0.0 | 633 |
MS.gene065234.t1 | MTR_8g468810 | 57.025 | 363 | 143 | 8 | 1 | 356 | 107 | 463 | 1.53e-128 | 376 |
MS.gene065234.t1 | MTR_8g058970 | 55.906 | 381 | 139 | 9 | 1 | 356 | 101 | 477 | 2.91e-121 | 358 |
MS.gene065234.t1 | MTR_8g062270 | 52.632 | 361 | 154 | 5 | 2 | 355 | 103 | 453 | 4.90e-117 | 347 |
MS.gene065234.t1 | MTR_8g467800 | 52.329 | 365 | 153 | 7 | 3 | 356 | 99 | 453 | 4.08e-107 | 322 |
MS.gene065234.t1 | MTR_8g468840 | 52.646 | 359 | 156 | 7 | 2 | 354 | 98 | 448 | 1.43e-104 | 315 |
MS.gene065234.t1 | MTR_5g092960 | 53.973 | 365 | 148 | 6 | 3 | 355 | 105 | 461 | 1.05e-103 | 313 |
MS.gene065234.t1 | MTR_4g032730 | 48.021 | 379 | 159 | 8 | 2 | 355 | 101 | 466 | 5.96e-97 | 296 |
MS.gene065234.t1 | MTR_8g468810 | 58.148 | 270 | 101 | 7 | 1 | 263 | 107 | 371 | 8.57e-91 | 277 |
MS.gene065234.t1 | MTR_8g014260 | 46.703 | 364 | 178 | 11 | 1 | 356 | 96 | 451 | 2.58e-89 | 276 |
MS.gene065234.t1 | MTR_8g468760 | 47.765 | 358 | 148 | 5 | 2 | 355 | 96 | 418 | 3.51e-87 | 269 |
MS.gene065234.t1 | MTR_8g445780 | 48.710 | 310 | 149 | 7 | 1 | 306 | 86 | 389 | 7.78e-83 | 257 |
MS.gene065234.t1 | MTR_8g468810 | 60.680 | 206 | 77 | 3 | 1 | 206 | 107 | 308 | 6.58e-74 | 232 |
MS.gene065234.t1 | MTR_8g468810 | 60.680 | 206 | 77 | 3 | 1 | 206 | 107 | 308 | 1.12e-73 | 231 |
MS.gene065234.t1 | MTR_8g468810 | 60.680 | 206 | 77 | 3 | 1 | 206 | 107 | 308 | 1.48e-73 | 232 |
MS.gene065234.t1 | MTR_5g092960 | 55.926 | 270 | 107 | 4 | 3 | 263 | 105 | 371 | 9.72e-72 | 229 |
MS.gene065234.t1 | MTR_4g024710 | 44.781 | 297 | 154 | 7 | 63 | 356 | 58 | 347 | 1.03e-69 | 222 |
MS.gene065234.t1 | MTR_8g469020 | 41.081 | 370 | 196 | 9 | 2 | 356 | 89 | 451 | 2.90e-69 | 224 |
MS.gene065234.t1 | MTR_8g014210 | 48.739 | 238 | 114 | 4 | 120 | 356 | 1 | 231 | 4.25e-64 | 204 |
MS.gene065234.t1 | MTR_8g058965 | 39.946 | 373 | 195 | 9 | 2 | 356 | 95 | 456 | 1.00e-60 | 202 |
MS.gene065234.t1 | MTR_8g062080 | 38.462 | 351 | 185 | 10 | 15 | 356 | 117 | 445 | 1.59e-60 | 201 |
MS.gene065234.t1 | MTR_4g050250 | 40.127 | 314 | 169 | 5 | 2 | 298 | 107 | 418 | 2.78e-57 | 192 |
MS.gene065234.t1 | MTR_4g024745 | 43.478 | 276 | 149 | 6 | 61 | 333 | 10 | 281 | 1.56e-56 | 186 |
MS.gene065234.t1 | MTR_8g014160 | 39.058 | 361 | 154 | 10 | 1 | 356 | 126 | 425 | 1.70e-55 | 187 |
MS.gene065234.t1 | MTR_8g062010 | 39.368 | 348 | 187 | 9 | 13 | 356 | 103 | 430 | 3.30e-55 | 187 |
MS.gene065234.t1 | MTR_8g070950 | 38.017 | 363 | 192 | 12 | 2 | 356 | 97 | 434 | 4.86e-55 | 186 |
MS.gene065234.t1 | MTR_8g062310 | 37.830 | 341 | 184 | 9 | 18 | 356 | 114 | 428 | 5.68e-52 | 178 |
MS.gene065234.t1 | MTR_8g467800 | 51.389 | 216 | 95 | 5 | 3 | 213 | 99 | 309 | 8.18e-47 | 162 |
MS.gene065234.t1 | MTR_8g062300 | 34.667 | 375 | 195 | 8 | 14 | 356 | 121 | 477 | 3.40e-45 | 161 |
MS.gene065234.t1 | MTR_8g077460 | 33.148 | 359 | 158 | 13 | 3 | 356 | 94 | 375 | 1.71e-37 | 138 |
MS.gene065234.t1 | MTR_8g467790 | 31.579 | 304 | 157 | 10 | 2 | 298 | 234 | 493 | 2.43e-27 | 112 |
MS.gene065234.t1 | MTR_2g086020 | 44.048 | 168 | 86 | 4 | 193 | 356 | 152 | 315 | 4.23e-27 | 109 |
MS.gene065234.t1 | MTR_4g113810 | 40.805 | 174 | 90 | 6 | 1 | 167 | 1 | 168 | 2.59e-24 | 98.2 |
MS.gene065234.t1 | MTR_5g084070 | 30.205 | 341 | 211 | 14 | 18 | 350 | 100 | 421 | 7.66e-19 | 87.8 |
MS.gene065234.t1 | MTR_4g056040 | 29.651 | 344 | 206 | 12 | 16 | 336 | 125 | 455 | 6.53e-18 | 85.1 |
MS.gene065234.t1 | MTR_4g056070 | 31.975 | 319 | 168 | 15 | 18 | 306 | 137 | 436 | 8.53e-18 | 84.7 |
MS.gene065234.t1 | MTR_4g055990 | 29.178 | 353 | 203 | 13 | 15 | 336 | 131 | 467 | 2.39e-17 | 83.6 |
MS.gene065234.t1 | MTR_4g055990 | 29.178 | 353 | 203 | 13 | 15 | 336 | 131 | 467 | 2.81e-17 | 83.2 |
MS.gene065234.t1 | MTR_3g087260 | 29.483 | 329 | 165 | 11 | 80 | 355 | 142 | 456 | 7.06e-16 | 79.0 |
MS.gene065234.t1 | MTR_5g080710 | 30.286 | 350 | 213 | 15 | 18 | 355 | 123 | 453 | 7.86e-16 | 79.0 |
MS.gene065234.t1 | MTR_8g014230 | 50.909 | 55 | 27 | 0 | 279 | 333 | 31 | 85 | 7.79e-13 | 64.7 |
MS.gene065234.t1 | MTR_1g041245 | 26.630 | 368 | 189 | 16 | 2 | 356 | 87 | 386 | 8.63e-13 | 69.3 |
MS.gene065234.t1 | MTR_4g056020 | 27.119 | 354 | 202 | 14 | 16 | 336 | 95 | 425 | 1.34e-12 | 68.9 |
MS.gene065234.t1 | MTR_7g098510 | 26.923 | 286 | 141 | 12 | 80 | 356 | 165 | 391 | 1.39e-12 | 68.6 |
MS.gene065234.t1 | MTR_0543s0010 | 28.571 | 252 | 139 | 8 | 129 | 355 | 214 | 449 | 1.70e-11 | 65.5 |
MS.gene065234.t1 | MTR_8g014220 | 42.342 | 111 | 48 | 5 | 3 | 107 | 60 | 160 | 1.95e-11 | 62.4 |
MS.gene065234.t1 | MTR_7g034120 | 29.787 | 141 | 81 | 4 | 222 | 356 | 180 | 308 | 2.78e-11 | 64.3 |
MS.gene065234.t1 | MTR_7g033915 | 32.877 | 146 | 72 | 6 | 222 | 355 | 233 | 364 | 4.19e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065234.t1 | AT4G26340 | 31.503 | 346 | 208 | 13 | 21 | 356 | 93 | 419 | 2.33e-27 | 112 |
MS.gene065234.t1 | AT5G56370 | 28.302 | 371 | 207 | 14 | 8 | 355 | 86 | 420 | 1.33e-20 | 92.8 |
MS.gene065234.t1 | AT5G56370 | 28.302 | 371 | 207 | 14 | 8 | 355 | 86 | 420 | 1.33e-20 | 92.8 |
MS.gene065234.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 2.51e-20 | 92.0 |
MS.gene065234.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 2.51e-20 | 92.0 |
MS.gene065234.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 2.51e-20 | 92.0 |
MS.gene065234.t1 | AT1G13780 | 28.261 | 322 | 199 | 12 | 53 | 353 | 142 | 452 | 2.55e-20 | 92.0 |
MS.gene065234.t1 | AT1G32375 | 28.493 | 365 | 226 | 14 | 2 | 356 | 83 | 422 | 3.15e-20 | 91.7 |
MS.gene065234.t1 | AT1G32375 | 28.493 | 365 | 226 | 14 | 2 | 356 | 83 | 422 | 3.15e-20 | 91.7 |
MS.gene065234.t1 | AT5G62970 | 29.003 | 331 | 208 | 13 | 13 | 331 | 112 | 427 | 3.73e-20 | 91.7 |
MS.gene065234.t1 | AT4G26350 | 27.654 | 358 | 221 | 11 | 18 | 356 | 90 | 428 | 4.69e-20 | 91.3 |
MS.gene065234.t1 | AT4G10420 | 27.457 | 346 | 214 | 16 | 21 | 355 | 2 | 321 | 7.60e-19 | 86.7 |
MS.gene065234.t1 | AT5G44950 | 29.846 | 325 | 191 | 18 | 21 | 322 | 96 | 406 | 5.22e-18 | 85.1 |
MS.gene065234.t1 | AT5G27750 | 28.190 | 337 | 193 | 13 | 53 | 356 | 137 | 457 | 7.66e-18 | 84.7 |
MS.gene065234.t1 | AT5G53635 | 26.611 | 357 | 217 | 16 | 20 | 355 | 93 | 425 | 7.94e-18 | 84.7 |
MS.gene065234.t1 | AT5G56380 | 31.436 | 369 | 200 | 18 | 16 | 356 | 96 | 439 | 8.44e-18 | 84.7 |
MS.gene065234.t1 | AT5G56380 | 31.436 | 369 | 200 | 18 | 16 | 356 | 96 | 439 | 8.44e-18 | 84.7 |
MS.gene065234.t1 | AT5G38590 | 28.571 | 329 | 195 | 15 | 7 | 321 | 81 | 383 | 1.01e-17 | 84.3 |
MS.gene065234.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.04e-17 | 84.3 |
MS.gene065234.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.04e-17 | 84.3 |
MS.gene065234.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.04e-17 | 84.3 |
MS.gene065234.t1 | AT3G54910 | 27.874 | 348 | 218 | 14 | 17 | 356 | 51 | 373 | 1.71e-17 | 83.2 |
MS.gene065234.t1 | AT3G54910 | 27.874 | 348 | 218 | 14 | 17 | 356 | 51 | 373 | 1.71e-17 | 83.2 |
MS.gene065234.t1 | AT3G54910 | 27.874 | 348 | 218 | 14 | 17 | 356 | 51 | 373 | 1.71e-17 | 83.2 |
MS.gene065234.t1 | AT5G56410 | 28.490 | 351 | 222 | 14 | 13 | 350 | 105 | 439 | 2.50e-17 | 83.6 |
MS.gene065234.t1 | AT3G49030 | 30.233 | 301 | 178 | 13 | 69 | 355 | 158 | 440 | 2.96e-17 | 83.2 |
MS.gene065234.t1 | AT3G50710 | 29.412 | 357 | 219 | 13 | 15 | 356 | 89 | 427 | 5.99e-17 | 82.0 |
MS.gene065234.t1 | AT5G56390 | 27.044 | 318 | 196 | 11 | 59 | 355 | 122 | 424 | 7.51e-17 | 81.6 |
MS.gene065234.t1 | AT1G51370 | 28.726 | 369 | 214 | 19 | 1 | 351 | 93 | 430 | 3.05e-16 | 80.1 |
MS.gene065234.t1 | AT5G56400 | 27.759 | 299 | 173 | 11 | 79 | 356 | 179 | 455 | 3.49e-16 | 79.7 |
MS.gene065234.t1 | AT5G56820 | 30.159 | 315 | 183 | 12 | 53 | 353 | 132 | 423 | 1.09e-15 | 78.2 |
MS.gene065234.t1 | AT2G26860 | 27.356 | 329 | 210 | 12 | 13 | 325 | 85 | 400 | 1.71e-15 | 77.4 |
MS.gene065234.t1 | AT2G26860 | 27.356 | 329 | 210 | 12 | 13 | 325 | 85 | 400 | 1.71e-15 | 77.4 |
MS.gene065234.t1 | AT1G78750 | 28.793 | 323 | 192 | 13 | 53 | 353 | 149 | 455 | 5.09e-15 | 76.3 |
MS.gene065234.t1 | AT1G78750 | 28.793 | 323 | 192 | 13 | 53 | 353 | 149 | 455 | 5.09e-15 | 76.3 |
MS.gene065234.t1 | AT4G00160 | 28.492 | 358 | 212 | 17 | 21 | 356 | 109 | 444 | 5.61e-15 | 76.3 |
MS.gene065234.t1 | AT1G69630 | 27.385 | 325 | 190 | 12 | 55 | 353 | 144 | 448 | 7.21e-15 | 75.9 |
MS.gene065234.t1 | AT3G52690 | 30.612 | 294 | 174 | 14 | 76 | 355 | 20 | 297 | 1.43e-14 | 73.9 |
MS.gene065234.t1 | AT5G50270 | 26.888 | 331 | 218 | 11 | 15 | 333 | 88 | 406 | 2.00e-14 | 74.3 |
MS.gene065234.t1 | AT3G26920 | 28.866 | 291 | 175 | 15 | 79 | 355 | 67 | 339 | 2.88e-14 | 73.6 |
MS.gene065234.t1 | AT3G26920 | 28.866 | 291 | 175 | 15 | 79 | 355 | 67 | 339 | 2.88e-14 | 73.6 |
MS.gene065234.t1 | AT5G56560 | 25.278 | 360 | 235 | 12 | 7 | 356 | 83 | 418 | 4.57e-14 | 73.2 |
MS.gene065234.t1 | AT5G56800 | 26.316 | 285 | 180 | 11 | 82 | 355 | 78 | 343 | 5.42e-14 | 72.8 |
MS.gene065234.t1 | AT5G22670 | 26.558 | 369 | 204 | 15 | 21 | 353 | 102 | 439 | 8.62e-14 | 72.4 |
MS.gene065234.t1 | AT1G66320 | 25.067 | 375 | 233 | 16 | 1 | 353 | 106 | 454 | 9.44e-14 | 72.4 |
MS.gene065234.t1 | AT5G56810 | 30.595 | 353 | 211 | 13 | 15 | 353 | 99 | 431 | 9.76e-14 | 72.4 |
MS.gene065234.t1 | AT1G05080 | 27.726 | 321 | 196 | 13 | 53 | 355 | 136 | 438 | 2.39e-13 | 71.2 |
MS.gene065234.t1 | AT5G38590 | 30.660 | 212 | 119 | 10 | 7 | 208 | 46 | 239 | 4.29e-13 | 68.9 |
MS.gene065234.t1 | AT5G56370 | 29.091 | 275 | 145 | 11 | 8 | 270 | 86 | 322 | 4.94e-13 | 69.7 |
MS.gene065234.t1 | AT2G26030 | 26.243 | 362 | 228 | 16 | 20 | 353 | 93 | 443 | 6.87e-13 | 69.7 |
MS.gene065234.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 20 | 365 | 7.72e-13 | 69.3 |
MS.gene065234.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 93 | 438 | 1.08e-12 | 69.3 |
MS.gene065234.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 93 | 438 | 1.08e-12 | 69.3 |
MS.gene065234.t1 | AT5G53840 | 25.287 | 348 | 229 | 13 | 20 | 353 | 107 | 437 | 1.12e-12 | 69.3 |
MS.gene065234.t1 | AT5G56440 | 29.377 | 337 | 173 | 15 | 53 | 355 | 124 | 429 | 2.07e-12 | 68.2 |
MS.gene065234.t1 | AT1G66290 | 27.217 | 327 | 183 | 15 | 56 | 353 | 150 | 450 | 4.34e-12 | 67.4 |
MS.gene065234.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 5.45e-12 | 67.0 |
MS.gene065234.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 5.45e-12 | 67.0 |
MS.gene065234.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 5.45e-12 | 67.0 |
MS.gene065234.t1 | AT5G22700 | 25.000 | 348 | 216 | 15 | 2 | 323 | 81 | 409 | 1.19e-11 | 65.9 |
MS.gene065234.t1 | AT5G22700 | 25.000 | 348 | 216 | 15 | 2 | 323 | 81 | 409 | 1.19e-11 | 65.9 |
MS.gene065234.t1 | AT5G22700 | 25.000 | 348 | 216 | 15 | 2 | 323 | 81 | 409 | 1.19e-11 | 65.9 |
MS.gene065234.t1 | AT5G22700 | 25.000 | 348 | 216 | 15 | 2 | 323 | 81 | 409 | 1.19e-11 | 65.9 |
MS.gene065234.t1 | AT5G22700 | 25.356 | 351 | 211 | 16 | 2 | 323 | 118 | 446 | 1.42e-11 | 65.9 |
MS.gene065234.t1 | AT1G66640 | 25.205 | 365 | 230 | 14 | 1 | 353 | 80 | 413 | 1.61e-11 | 65.5 |
MS.gene065234.t1 | AT5G56560 | 26.207 | 290 | 185 | 10 | 78 | 356 | 336 | 607 | 1.93e-11 | 65.9 |
MS.gene065234.t1 | AT4G00315 | 27.607 | 326 | 199 | 15 | 53 | 355 | 129 | 440 | 1.93e-11 | 65.5 |
MS.gene065234.t1 | AT3G26930 | 27.616 | 344 | 211 | 15 | 34 | 356 | 72 | 398 | 2.17e-11 | 65.1 |
MS.gene065234.t1 | AT3G26930 | 27.616 | 344 | 211 | 15 | 34 | 356 | 117 | 443 | 2.40e-11 | 65.1 |
MS.gene065234.t1 | AT2G04230 | 27.966 | 354 | 220 | 15 | 21 | 356 | 110 | 446 | 2.43e-11 | 65.1 |
MS.gene065234.t1 | AT5G27750 | 30.172 | 232 | 133 | 9 | 53 | 259 | 137 | 364 | 2.69e-11 | 64.7 |
MS.gene065234.t1 | AT1G80470 | 25.155 | 322 | 196 | 16 | 53 | 353 | 137 | 434 | 3.98e-11 | 64.3 |
MS.gene065234.t1 | AT4G14096 | 29.492 | 295 | 176 | 15 | 11 | 286 | 95 | 376 | 4.38e-11 | 64.3 |
MS.gene065234.t1 | AT4G14096 | 29.492 | 295 | 176 | 15 | 11 | 286 | 95 | 376 | 4.38e-11 | 64.3 |
MS.gene065234.t1 | AT1G55030 | 27.157 | 313 | 194 | 15 | 56 | 355 | 130 | 421 | 5.17e-11 | 63.9 |
MS.gene065234.t1 | AT2G26030 | 27.599 | 279 | 169 | 13 | 98 | 353 | 15 | 283 | 5.18e-11 | 63.2 |
MS.gene065234.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 5.58e-11 | 63.9 |
MS.gene065234.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 5.58e-11 | 63.9 |
MS.gene065234.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 5.58e-11 | 63.9 |
MS.gene065234.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 5.58e-11 | 63.9 |
MS.gene065234.t1 | AT5G56452 | 28.696 | 230 | 142 | 9 | 132 | 356 | 15 | 227 | 5.96e-11 | 62.4 |
MS.gene065234.t1 | AT1G55030 | 27.157 | 313 | 194 | 15 | 56 | 355 | 140 | 431 | 6.17e-11 | 63.9 |
MS.gene065234.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 104 | 362 | 6.43e-11 | 63.5 |
MS.gene065234.t1 | AT5G56452 | 28.696 | 230 | 141 | 9 | 132 | 356 | 15 | 226 | 6.59e-11 | 62.0 |
MS.gene065234.t1 | AT1G06630 | 27.899 | 276 | 165 | 10 | 1 | 260 | 95 | 352 | 8.53e-11 | 63.2 |
MS.gene065234.t1 | AT1G06630 | 27.899 | 276 | 165 | 10 | 1 | 260 | 95 | 352 | 8.53e-11 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTGGATCCGCAGCGCAAC+TGG | 0.164566 | 2.1:+17650379 | MS.gene065234:CDS |
TTGAAGACGATGCTTATTTC+TGG | 0.241668 | 2.1:+17652609 | MS.gene065234:CDS |
CTAGCTGCAATACCTTTCTA+TGG | 0.310357 | 2.1:+17652456 | MS.gene065234:CDS |
TGGTTTATCGTTGGACAAAA+AGG | 0.335804 | 2.1:+17652629 | MS.gene065234:CDS |
TTCCATTGCTCCCGATCGTT+TGG | 0.356798 | 2.1:+17651829 | MS.gene065234:CDS |
TGGGTCTTGTCTTGAGGAAC+TGG | 0.374715 | 2.1:+17650399 | MS.gene065234:CDS |
TCACCGTTGAGAACAACTTT+GGG | 0.377628 | 2.1:+17651891 | MS.gene065234:CDS |
GGAAGGTGGCACACGAAGTC+TGG | 0.379436 | 2.1:-17651852 | None:intergenic |
TCTCCAACTCTATTGACTCC+TGG | 0.398291 | 2.1:+17650362 | MS.gene065234:CDS |
CCCAGTTGCGCTGCGGATCC+AGG | 0.399652 | 2.1:-17650380 | None:intergenic |
AAGTGGGATACGAGACAATT+AGG | 0.402899 | 2.1:-17652504 | None:intergenic |
TTCAGCGATGCTGCCACAAT+TGG | 0.403802 | 2.1:+17651971 | MS.gene065234:CDS |
TTCACCGTTGAGAACAACTT+TGG | 0.408660 | 2.1:+17651890 | MS.gene065234:CDS |
CCTTATTCTAAAAGAATTCT+CGG | 0.409820 | 2.1:+17652668 | MS.gene065234:CDS |
TGCAATACCTTTCTATGGAT+TGG | 0.413537 | 2.1:+17652461 | MS.gene065234:CDS |
GCTCGGAGGAGATTGAATAA+AGG | 0.413700 | 2.1:-17652061 | None:intergenic |
TGCTGCCACAATTGGAAACT+TGG | 0.422538 | 2.1:+17651979 | MS.gene065234:CDS |
GGTGAATTTAAACCTCTTCA+AGG | 0.429011 | 2.1:-17651873 | None:intergenic |
TGGCAGTTGGCAGAGCCCTT+TGG | 0.430626 | 2.1:-17652696 | None:intergenic |
AATTCCGAGACATCTATAAC+AGG | 0.431212 | 2.1:-17652229 | None:intergenic |
AGCATCGCTGAATGTGATAT+TGG | 0.440141 | 2.1:-17651960 | None:intergenic |
CTCGGAGGAGATTGAATAAA+GGG | 0.442168 | 2.1:-17652060 | None:intergenic |
GCTTATTTCTGGTTTATCGT+TGG | 0.442528 | 2.1:+17652620 | MS.gene065234:CDS |
CAATAGAGTTGGAGAAGAAA+TGG | 0.444606 | 2.1:-17650354 | None:intergenic |
CAATTCAATCAAACTTAAGT+TGG | 0.469880 | 2.1:-17652716 | None:intergenic |
AGTTGCAGCTTCTTCAATGA+TGG | 0.480179 | 2.1:-17651731 | None:intergenic |
AGGCTAAGATATTTGAGATC+TGG | 0.480834 | 2.1:-17651935 | None:intergenic |
CCTGGATCCGCAGCGCAACT+GGG | 0.481956 | 2.1:+17650380 | MS.gene065234:CDS |
AGCTAAAATAGTGAGAAAGA+TGG | 0.488015 | 2.1:-17650461 | None:intergenic |
CCATCTCATGCAAACATGCT+TGG | 0.493909 | 2.1:-17652551 | None:intergenic |
CGAAGTCTGGCCAAACGATC+GGG | 0.496458 | 2.1:-17651839 | None:intergenic |
GTTTAATTCTAGAGAGAGCT+CGG | 0.499374 | 2.1:-17652078 | None:intergenic |
CGCAACTGGGTCTTGTCTTG+AGG | 0.500143 | 2.1:+17650393 | MS.gene065234:CDS |
TTGAACTTTATTCACTTCAA+AGG | 0.504563 | 2.1:+17652525 | MS.gene065234:CDS |
CCAAGCATGTTTGCATGAGA+TGG | 0.506332 | 2.1:+17652551 | MS.gene065234:CDS |
GTGTGCCACCTTCCTTGAAG+AGG | 0.506971 | 2.1:+17651861 | MS.gene065234:CDS |
TCACTATTTGCTTCATCTAG+AGG | 0.509315 | 2.1:+17652252 | MS.gene065234:CDS |
GCACTAACCTCGTCTCTCTC+AGG | 0.511577 | 2.1:+17650488 | MS.gene065234:CDS |
TGCCCCTGTTATAGATGTCT+CGG | 0.516230 | 2.1:+17652225 | MS.gene065234:CDS |
AAGTTCTAGTGTCTCGAGGA+TGG | 0.521504 | 2.1:-17651807 | None:intergenic |
ATCAAACTTAAGTTGGCAGT+TGG | 0.522574 | 2.1:-17652709 | None:intergenic |
GAGAAAACTCAAGCTGAATG+AGG | 0.523281 | 2.1:-17652284 | None:intergenic |
CGAAAGATGCGTCTTTCTTG+TGG | 0.526529 | 2.1:+17650316 | None:intergenic |
GGCCAAACGATCGGGAGCAA+TGG | 0.533751 | 2.1:-17651831 | None:intergenic |
TGGTGATATCTACTTGGTGT+TGG | 0.535782 | 2.1:+17651685 | MS.gene065234:CDS |
TTGCATGAGATGGAGTTTGT+TGG | 0.537929 | 2.1:+17652561 | MS.gene065234:CDS |
TTATGTCGAAATGAATTCCA+TGG | 0.542665 | 2.1:+17651763 | MS.gene065234:CDS |
ACGAAGTCTGGCCAAACGAT+CGG | 0.544291 | 2.1:-17651840 | None:intergenic |
TGAAGTGAATAAAGTTCAAG+TGG | 0.545443 | 2.1:-17652521 | None:intergenic |
CACCGTTGAGAACAACTTTG+GGG | 0.549956 | 2.1:+17651892 | MS.gene065234:CDS |
TCTCTGTGGTGATATCTACT+TGG | 0.550066 | 2.1:+17651679 | MS.gene065234:CDS |
ATTATGAGATCTTGAAGCAT+AGG | 0.552931 | 2.1:-17652328 | None:intergenic |
GATCCAGGAGTCAATAGAGT+TGG | 0.557350 | 2.1:-17650365 | None:intergenic |
GCTTGAGAGTAGGTTATCCA+TGG | 0.563182 | 2.1:-17651780 | None:intergenic |
AATTGGAAACTTGGACAAAG+TGG | 0.563962 | 2.1:+17651988 | MS.gene065234:CDS |
AGTTCTAGTGTCTCGAGGAT+GGG | 0.564338 | 2.1:-17651806 | None:intergenic |
AGAAAACTCAAGCTGAATGA+GGG | 0.575669 | 2.1:-17652283 | None:intergenic |
TTAAACCTCTTCAAGGAAGG+TGG | 0.578917 | 2.1:-17651866 | None:intergenic |
TTTGTCCAAGTTTCCAATTG+TGG | 0.579953 | 2.1:-17651984 | None:intergenic |
AAGAAGCTGCAACTAGACAT+TGG | 0.580979 | 2.1:+17651740 | MS.gene065234:CDS |
TTCCGAGACATCTATAACAG+GGG | 0.581383 | 2.1:-17652227 | None:intergenic |
GAATTCTCGGATATACCAAA+GGG | 0.581497 | 2.1:+17652681 | MS.gene065234:CDS |
AATTTAAACCTCTTCAAGGA+AGG | 0.584451 | 2.1:-17651869 | None:intergenic |
AGAATTCTCGGATATACCAA+AGG | 0.593463 | 2.1:+17652680 | MS.gene065234:CDS |
AGCCCCAAAGTTGTTCTCAA+CGG | 0.604919 | 2.1:-17651894 | None:intergenic |
AGAAATGGTCAACTTCAGAA+TGG | 0.610128 | 2.1:-17650339 | None:intergenic |
AGATGGAGAAGACATATTCA+CGG | 0.615043 | 2.1:-17650444 | None:intergenic |
GAAGTGAATAAAGTTCAAGT+GGG | 0.615435 | 2.1:-17652520 | None:intergenic |
ATTCCGAGACATCTATAACA+GGG | 0.634060 | 2.1:-17652228 | None:intergenic |
GTTGTGTTTATCAACAACCA+AGG | 0.637608 | 2.1:+17652108 | MS.gene065234:CDS |
CCTATGTATCCCAGTCTCTG+TGG | 0.640791 | 2.1:+17651665 | MS.gene065234:intron |
CGCTGAATGTGATATTGGTG+AGG | 0.643173 | 2.1:-17651955 | None:intergenic |
GGATGGGACAGCTTGAGAGT+AGG | 0.646261 | 2.1:-17651790 | None:intergenic |
TGGAAAGTTCTAGTGTCTCG+AGG | 0.655753 | 2.1:-17651811 | None:intergenic |
GACAAGACCCAGTTGCGCTG+CGG | 0.671718 | 2.1:-17650387 | None:intergenic |
TTATTTACCTGAGAGAGACG+AGG | 0.674730 | 2.1:-17650495 | None:intergenic |
TCTCATAATTCAGAACGACA+AGG | 0.693913 | 2.1:+17652342 | MS.gene065234:CDS |
TAATTCTAGAGAGAGCTCGG+AGG | 0.699846 | 2.1:-17652075 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATATACTTTATCT+TGG | - | chr2.1:17651512-17651531 | None:intergenic | 10.0% |
!! | AAAAAAATATACTTTATCTT+GGG | - | chr2.1:17651511-17651530 | None:intergenic | 10.0% |
!! | CATTTAGTTAAAAAAAAAAA+TGG | - | chr2.1:17651192-17651211 | None:intergenic | 10.0% |
!!! | CATTTTTTTTTTTAACTAAA+TGG | + | chr2.1:17651190-17651209 | MS.gene065234:intron | 10.0% |
!! | AATCAATTTATAAAGTTTCA+AGG | + | chr2.1:17651469-17651488 | MS.gene065234:intron | 15.0% |
!! | CTAAAATAAATGAATATTGT+CGG | - | chr2.1:17651244-17651263 | None:intergenic | 15.0% |
!! | TTAGTTAAAAAAAAAAATGG+AGG | - | chr2.1:17651189-17651208 | None:intergenic | 15.0% |
!!! | ACTTTTTAAGAAGTTAAAAA+AGG | + | chr2.1:17651418-17651437 | MS.gene065234:intron | 15.0% |
!!! | TTTTTTAACTTCTTAAAAAG+TGG | - | chr2.1:17651419-17651438 | None:intergenic | 15.0% |
!! | CATAATTGTTATGTTATGTT+AGG | - | chr2.1:17651638-17651657 | None:intergenic | 20.0% |
!! | TTTATCTTAACTAGTGTATT+AGG | + | chr2.1:17651538-17651557 | MS.gene065234:intron | 20.0% |
!!! | AATTCAATCAACTAGTTTAT+CGG | - | chr2.1:17650647-17650666 | None:intergenic | 20.0% |
!!! | ATATTTGAGATATGAAAGAT+TGG | - | chr2.1:17650523-17650542 | None:intergenic | 20.0% |
! | AGATACTTATTAGGTAAATG+TGG | - | chr2.1:17651149-17651168 | None:intergenic | 25.0% |
! | GATACTTATTAGGTAAATGT+GGG | - | chr2.1:17651148-17651167 | None:intergenic | 25.0% |
! | TATAACGATAGATAGTTATG+AGG | + | chr2.1:17650618-17650637 | MS.gene065234:intron | 25.0% |
! | TTGAACTTTATTCACTTCAA+AGG | + | chr2.1:17652525-17652544 | MS.gene065234:CDS | 25.0% |
! | TTGATTGAATTTGTAGTGTT+TGG | + | chr2.1:17650656-17650675 | MS.gene065234:intron | 25.0% |
!! | AAAAAAAAAAATGGAGGTGT+TGG | - | chr2.1:17651183-17651202 | None:intergenic | 25.0% |
!! | ATTCAATCAACTAGTTTATC+GGG | - | chr2.1:17650646-17650665 | None:intergenic | 25.0% |
!! | CCTTATTCTAAAAGAATTCT+CGG | + | chr2.1:17652668-17652687 | MS.gene065234:CDS | 25.0% |
!!! | AATTCGAAGATGAGTTTTAA+AGG | - | chr2.1:17650935-17650954 | None:intergenic | 25.0% |
!!! | ATTCGAAGATGAGTTTTAAA+GGG | - | chr2.1:17650934-17650953 | None:intergenic | 25.0% |
AAGGATAACTACTCACATTT+AGG | + | chr2.1:17651078-17651097 | MS.gene065234:intron | 30.0% | |
AATGAAAACTTAACTCACCT+TGG | - | chr2.1:17652128-17652147 | None:intergenic | 30.0% | |
AATTTAAACCTCTTCAAGGA+AGG | - | chr2.1:17651872-17651891 | None:intergenic | 30.0% | |
ACATTTGTGTCAACTAAAGT+TGG | + | chr2.1:17650965-17650984 | MS.gene065234:intron | 30.0% | |
AGCTAAAATAGTGAGAAAGA+TGG | - | chr2.1:17650464-17650483 | None:intergenic | 30.0% | |
AGTGTATTAGGACGTATTTA+GGG | + | chr2.1:17651550-17651569 | MS.gene065234:intron | 30.0% | |
ATTATGAGATCTTGAAGCAT+AGG | - | chr2.1:17652331-17652350 | None:intergenic | 30.0% | |
CAAACTGTCTAGTAATTGTA+TGG | - | chr2.1:17650551-17650570 | None:intergenic | 30.0% | |
CACATCACATGTAACTTAAA+GGG | - | chr2.1:17651591-17651610 | None:intergenic | 30.0% | |
GAAGTGAATAAAGTTCAAGT+GGG | - | chr2.1:17652523-17652542 | None:intergenic | 30.0% | |
GTTATCCTTATAATACTCTC+TGG | - | chr2.1:17651067-17651086 | None:intergenic | 30.0% | |
GTTATGTTAGGTTATCATCA+TGG | - | chr2.1:17651626-17651645 | None:intergenic | 30.0% | |
TAGTGTATTAGGACGTATTT+AGG | + | chr2.1:17651549-17651568 | MS.gene065234:intron | 30.0% | |
TCACATCACATGTAACTTAA+AGG | - | chr2.1:17651592-17651611 | None:intergenic | 30.0% | |
TGAAGTGAATAAAGTTCAAG+TGG | - | chr2.1:17652524-17652543 | None:intergenic | 30.0% | |
TTAACTGTTGAACTAGCTAA+TGG | + | chr2.1:17650684-17650703 | MS.gene065234:intron | 30.0% | |
TTATGTCGAAATGAATTCCA+TGG | + | chr2.1:17651763-17651782 | MS.gene065234:CDS | 30.0% | |
! | AGGAACATTTTTGCTCTTTT+TGG | - | chr2.1:17652487-17652506 | None:intergenic | 30.0% |
! | TTGGCTATGTTTTACGAAAT+GGG | + | chr2.1:17652580-17652599 | MS.gene065234:CDS | 30.0% |
!! | TATGACCAGAGAGTATTATA+AGG | + | chr2.1:17651059-17651078 | MS.gene065234:intron | 30.0% |
!!! | CCGAGAATTCTTTTAGAATA+AGG | - | chr2.1:17652671-17652690 | None:intergenic | 30.0% |
AAGTTGGCGAATGATGTATT+TGG | + | chr2.1:17650981-17651000 | MS.gene065234:intron | 35.0% | |
AATATTTCCATTCCAGAGGA+AGG | + | chr2.1:17651330-17651349 | MS.gene065234:intron | 35.0% | |
AATTCCGAGACATCTATAAC+AGG | - | chr2.1:17652232-17652251 | None:intergenic | 35.0% | |
AATTGGAAACTTGGACAAAG+TGG | + | chr2.1:17651988-17652007 | MS.gene065234:CDS | 35.0% | |
AGAAAACTCAAGCTGAATGA+GGG | - | chr2.1:17652286-17652305 | None:intergenic | 35.0% | |
AGAAATGGTCAACTTCAGAA+TGG | - | chr2.1:17650342-17650361 | None:intergenic | 35.0% | |
AGAATTCTCGGATATACCAA+AGG | + | chr2.1:17652680-17652699 | MS.gene065234:CDS | 35.0% | |
AGAGTGTACTTCCATTCAAT+GGG | + | chr2.1:17651297-17651316 | MS.gene065234:intron | 35.0% | |
AGATGGAGAAGACATATTCA+CGG | - | chr2.1:17650447-17650466 | None:intergenic | 35.0% | |
ATTCCGAGACATCTATAACA+GGG | - | chr2.1:17652231-17652250 | None:intergenic | 35.0% | |
CAATAGAGTTGGAGAAGAAA+TGG | - | chr2.1:17650357-17650376 | None:intergenic | 35.0% | |
CTCACATTTAGGCTTACTTA+TGG | + | chr2.1:17651089-17651108 | MS.gene065234:intron | 35.0% | |
GAATTCTCGGATATACCAAA+GGG | + | chr2.1:17652681-17652700 | MS.gene065234:CDS | 35.0% | |
GGAGGAATGAGATACTTATT+AGG | - | chr2.1:17651158-17651177 | None:intergenic | 35.0% | |
GGTGAATTTAAACCTCTTCA+AGG | - | chr2.1:17651876-17651895 | None:intergenic | 35.0% | |
GTTGGACAAAAAGGAGAAAT+GGG | + | chr2.1:17652638-17652657 | MS.gene065234:CDS | 35.0% | |
GTTGTGTTTATCAACAACCA+AGG | + | chr2.1:17652108-17652127 | MS.gene065234:CDS | 35.0% | |
GTTTGATTGTGCTGTATGTT+TGG | + | chr2.1:17650566-17650585 | MS.gene065234:intron | 35.0% | |
TCACTATTTGCTTCATCTAG+AGG | + | chr2.1:17652252-17652271 | MS.gene065234:CDS | 35.0% | |
TCTCATAATTCAGAACGACA+AGG | + | chr2.1:17652342-17652361 | MS.gene065234:CDS | 35.0% | |
TGCAATACCTTTCTATGGAT+TGG | + | chr2.1:17652461-17652480 | MS.gene065234:CDS | 35.0% | |
TGGTTTATCGTTGGACAAAA+AGG | + | chr2.1:17652629-17652648 | MS.gene065234:CDS | 35.0% | |
TTGAAGACGATGCTTATTTC+TGG | + | chr2.1:17652609-17652628 | MS.gene065234:CDS | 35.0% | |
TTTGTCCAAGTTTCCAATTG+TGG | - | chr2.1:17651987-17652006 | None:intergenic | 35.0% | |
! | AAGAGTGTACTTCCATTCAA+TGG | + | chr2.1:17651296-17651315 | MS.gene065234:intron | 35.0% |
! | AGGCTAAGATATTTGAGATC+TGG | - | chr2.1:17651938-17651957 | None:intergenic | 35.0% |
! | GCTTTAAGCTATAAGCTACT+TGG | + | chr2.1:17650766-17650785 | MS.gene065234:intron | 35.0% |
! | GTTGGCTATGTTTTACGAAA+TGG | + | chr2.1:17652579-17652598 | MS.gene065234:CDS | 35.0% |
! | GTTTAATTCTAGAGAGAGCT+CGG | - | chr2.1:17652081-17652100 | None:intergenic | 35.0% |
!! | AAAAAAATGGAGGTGTTGGT+TGG | - | chr2.1:17651179-17651198 | None:intergenic | 35.0% |
!! | AACAGATTCATTTTCAGGAG+TGG | - | chr2.1:17652038-17652057 | None:intergenic | 35.0% |
!! | ATCAAACTTAAGTTGGCAGT+TGG | - | chr2.1:17652712-17652731 | None:intergenic | 35.0% |
!! | GCTTATTTCTGGTTTATCGT+TGG | + | chr2.1:17652620-17652639 | MS.gene065234:CDS | 35.0% |
!! | TCCTCTGGAATGGAAATATT+GGG | - | chr2.1:17651330-17651349 | None:intergenic | 35.0% |
!! | TTCCTCTGGAATGGAAATAT+TGG | - | chr2.1:17651331-17651350 | None:intergenic | 35.0% |
!! | TTTTTGGCCAATCCATAGAA+AGG | - | chr2.1:17652471-17652490 | None:intergenic | 35.0% |
!!! | TGAGTTTTAAAGGGTCTGTT+TGG | - | chr2.1:17650925-17650944 | None:intergenic | 35.0% |
AAGAAGCTGCAACTAGACAT+TGG | + | chr2.1:17651740-17651759 | MS.gene065234:CDS | 40.0% | |
AAGTGGGATACGAGACAATT+AGG | - | chr2.1:17652507-17652526 | None:intergenic | 40.0% | |
ACCACCATTATGGATGCTTT+AGG | + | chr2.1:17651387-17651406 | MS.gene065234:intron | 40.0% | |
ACCCAATATTTCCATTCCAG+AGG | + | chr2.1:17651326-17651345 | MS.gene065234:intron | 40.0% | |
AGCATCGCTGAATGTGATAT+TGG | - | chr2.1:17651963-17651982 | None:intergenic | 40.0% | |
AGGTGAAACAACCACCATTA+TGG | + | chr2.1:17651377-17651396 | MS.gene065234:intron | 40.0% | |
AGTTGCAGCTTCTTCAATGA+TGG | - | chr2.1:17651734-17651753 | None:intergenic | 40.0% | |
CAACATGAGACGACTTAACA+AGG | - | chr2.1:17652426-17652445 | None:intergenic | 40.0% | |
CCACCATTATGGATGCTTTA+GGG | + | chr2.1:17651388-17651407 | MS.gene065234:intron | 40.0% | |
CGTTGGACAAAAAGGAGAAA+TGG | + | chr2.1:17652637-17652656 | MS.gene065234:CDS | 40.0% | |
CTAGCTGCAATACCTTTCTA+TGG | + | chr2.1:17652456-17652475 | MS.gene065234:CDS | 40.0% | |
CTCGGAGGAGATTGAATAAA+GGG | - | chr2.1:17652063-17652082 | None:intergenic | 40.0% | |
CTTACTTATGGCATCCACAA+TGG | + | chr2.1:17651101-17651120 | MS.gene065234:intron | 40.0% | |
GAGAAAACTCAAGCTGAATG+AGG | - | chr2.1:17652287-17652306 | None:intergenic | 40.0% | |
GCTATAAGCTTGTGAGAGAA+TGG | + | chr2.1:17650828-17650847 | MS.gene065234:intron | 40.0% | |
TAGATATCACCACAGAGACT+GGG | - | chr2.1:17651677-17651696 | None:intergenic | 40.0% | |
TCACCGTTGAGAACAACTTT+GGG | + | chr2.1:17651891-17651910 | MS.gene065234:CDS | 40.0% | |
TCTCTGTGGTGATATCTACT+TGG | + | chr2.1:17651679-17651698 | MS.gene065234:CDS | 40.0% | |
TTAAACCTCTTCAAGGAAGG+TGG | - | chr2.1:17651869-17651888 | None:intergenic | 40.0% | |
TTATTTACCTGAGAGAGACG+AGG | - | chr2.1:17650498-17650517 | None:intergenic | 40.0% | |
TTCACCGTTGAGAACAACTT+TGG | + | chr2.1:17651890-17651909 | MS.gene065234:CDS | 40.0% | |
TTCCGAGACATCTATAACAG+GGG | - | chr2.1:17652230-17652249 | None:intergenic | 40.0% | |
TTGCATGAGATGGAGTTTGT+TGG | + | chr2.1:17652561-17652580 | MS.gene065234:CDS | 40.0% | |
TTGTTTCACCTACTTAGCAC+CGG | - | chr2.1:17651368-17651387 | None:intergenic | 40.0% | |
! | GGGTCAACAGATTCATTTTC+AGG | - | chr2.1:17652043-17652062 | None:intergenic | 40.0% |
! | TGACCCTAAAGCATCCATAA+TGG | - | chr2.1:17651394-17651413 | None:intergenic | 40.0% |
!! | TGGTGATATCTACTTGGTGT+TGG | + | chr2.1:17651685-17651704 | MS.gene065234:CDS | 40.0% |
AGCCCCAAAGTTGTTCTCAA+CGG | - | chr2.1:17651897-17651916 | None:intergenic | 45.0% | |
CACCGTTGAGAACAACTTTG+GGG | + | chr2.1:17651892-17651911 | MS.gene065234:CDS | 45.0% | |
CCAAGCATGTTTGCATGAGA+TGG | + | chr2.1:17652551-17652570 | MS.gene065234:CDS | 45.0% | |
CCATCTCATGCAAACATGCT+TGG | - | chr2.1:17652554-17652573 | None:intergenic | 45.0% | |
CGCTGAATGTGATATTGGTG+AGG | - | chr2.1:17651958-17651977 | None:intergenic | 45.0% | |
GATCCAGGAGTCAATAGAGT+TGG | - | chr2.1:17650368-17650387 | None:intergenic | 45.0% | |
GCTCGGAGGAGATTGAATAA+AGG | - | chr2.1:17652064-17652083 | None:intergenic | 45.0% | |
GCTTGAGAGTAGGTTATCCA+TGG | - | chr2.1:17651783-17651802 | None:intergenic | 45.0% | |
GTAGATATCACCACAGAGAC+TGG | - | chr2.1:17651678-17651697 | None:intergenic | 45.0% | |
TGCCCCTGTTATAGATGTCT+CGG | + | chr2.1:17652225-17652244 | MS.gene065234:CDS | 45.0% | |
TGCTGCCACAATTGGAAACT+TGG | + | chr2.1:17651979-17651998 | MS.gene065234:CDS | 45.0% | |
TGTTGTCTGTGTACAAGCAG+TGG | + | chr2.1:17652194-17652213 | MS.gene065234:intron | 45.0% | |
TGTTTCACCTACTTAGCACC+GGG | - | chr2.1:17651367-17651386 | None:intergenic | 45.0% | |
! | AAGTTCTAGTGTCTCGAGGA+TGG | - | chr2.1:17651810-17651829 | None:intergenic | 45.0% |
! | ACTTAGCACCGGGCTAAATA+GGG | - | chr2.1:17651357-17651376 | None:intergenic | 45.0% |
! | AGTTCTAGTGTCTCGAGGAT+GGG | - | chr2.1:17651809-17651828 | None:intergenic | 45.0% |
! | CCCTAAAGCATCCATAATGG+TGG | - | chr2.1:17651391-17651410 | None:intergenic | 45.0% |
! | TAATTCTAGAGAGAGCTCGG+AGG | - | chr2.1:17652078-17652097 | None:intergenic | 45.0% |
! | TACTTAGCACCGGGCTAAAT+AGG | - | chr2.1:17651358-17651377 | None:intergenic | 45.0% |
! | TATTTAGCCCGGTGCTAAGT+AGG | + | chr2.1:17651357-17651376 | MS.gene065234:intron | 45.0% |
! | TGGAAAGTTCTAGTGTCTCG+AGG | - | chr2.1:17651814-17651833 | None:intergenic | 45.0% |
!! | AAAATGGAGGTGTTGGTTGG+AGG | - | chr2.1:17651176-17651195 | None:intergenic | 45.0% |
!! | TCTCCAACTCTATTGACTCC+TGG | + | chr2.1:17650362-17650381 | MS.gene065234:CDS | 45.0% |
!!! | ATTTTTTTTTTTAACTAAAT+GGG | + | chr2.1:17651191-17651210 | MS.gene065234:intron | 5.0% |
!!! | TTTTAGTAAAATTTATTAAA+TGG | + | chr2.1:17651258-17651277 | MS.gene065234:intron | 5.0% |
ACGAAGTCTGGCCAAACGAT+CGG | - | chr2.1:17651843-17651862 | None:intergenic | 50.0% | |
AGGAAGGTCCCTATTTAGCC+CGG | + | chr2.1:17651346-17651365 | MS.gene065234:intron | 50.0% | |
ATGGAGCTCCAGTGGCTAAA+TGG | + | chr2.1:17651120-17651139 | MS.gene065234:intron | 50.0% | |
CCACAGAGACTGGGATACAT+AGG | - | chr2.1:17651668-17651687 | None:intergenic | 50.0% | |
CCTATGTATCCCAGTCTCTG+TGG | + | chr2.1:17651665-17651684 | MS.gene065234:intron | 50.0% | |
GCTAAATAGGGACCTTCCTC+TGG | - | chr2.1:17651345-17651364 | None:intergenic | 50.0% | |
GTATTGCAGCTAGACGCTGT+AGG | - | chr2.1:17652449-17652468 | None:intergenic | 50.0% | |
TGGGTGTGTTGCCCATTGAA+TGG | - | chr2.1:17651311-17651330 | None:intergenic | 50.0% | |
TGTGGGATCCATTTAGCCAC+TGG | - | chr2.1:17651131-17651150 | None:intergenic | 50.0% | |
TTCAGCGATGCTGCCACAAT+TGG | + | chr2.1:17651971-17651990 | MS.gene065234:CDS | 50.0% | |
TTCCATTGCTCCCGATCGTT+TGG | + | chr2.1:17651829-17651848 | MS.gene065234:CDS | 50.0% | |
! | ATAGGGACCTTCCTCTGGAA+TGG | - | chr2.1:17651340-17651359 | None:intergenic | 50.0% |
! | TGGGTCTTGTCTTGAGGAAC+TGG | + | chr2.1:17650399-17650418 | MS.gene065234:CDS | 50.0% |
CATCCACAATGGAGCTCCAG+TGG | + | chr2.1:17651112-17651131 | MS.gene065234:intron | 55.0% | |
CGAAGTCTGGCCAAACGATC+GGG | - | chr2.1:17651842-17651861 | None:intergenic | 55.0% | |
GCACTAACCTCGTCTCTCTC+AGG | + | chr2.1:17650488-17650507 | MS.gene065234:CDS | 55.0% | |
GGATGGGACAGCTTGAGAGT+AGG | - | chr2.1:17651793-17651812 | None:intergenic | 55.0% | |
GTGTGCCACCTTCCTTGAAG+AGG | + | chr2.1:17651861-17651880 | MS.gene065234:CDS | 55.0% | |
TAGCCACTGGAGCTCCATTG+TGG | - | chr2.1:17651118-17651137 | None:intergenic | 55.0% | |
! | CGCAACTGGGTCTTGTCTTG+AGG | + | chr2.1:17650393-17650412 | MS.gene065234:CDS | 55.0% |
GACAAGACCCAGTTGCGCTG+CGG | - | chr2.1:17650390-17650409 | None:intergenic | 60.0% | |
GGAAGGTGGCACACGAAGTC+TGG | - | chr2.1:17651855-17651874 | None:intergenic | 60.0% | |
GGCCAAACGATCGGGAGCAA+TGG | - | chr2.1:17651834-17651853 | None:intergenic | 60.0% | |
TGGCAGTTGGCAGAGCCCTT+TGG | - | chr2.1:17652699-17652718 | None:intergenic | 60.0% | |
CCTGGATCCGCAGCGCAACT+GGG | + | chr2.1:17650380-17650399 | MS.gene065234:CDS | 65.0% | |
TCCTGGATCCGCAGCGCAAC+TGG | + | chr2.1:17650379-17650398 | MS.gene065234:CDS | 65.0% | |
CCCAGTTGCGCTGCGGATCC+AGG | - | chr2.1:17650383-17650402 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 17650322 | 17652734 | 17650322 | ID=MS.gene065234 |
chr2.1 | mRNA | 17650322 | 17652734 | 17650322 | ID=MS.gene065234.t1;Parent=MS.gene065234 |
chr2.1 | exon | 17650322 | 17650509 | 17650322 | ID=MS.gene065234.t1.exon1;Parent=MS.gene065234.t1 |
chr2.1 | CDS | 17650322 | 17650509 | 17650322 | ID=cds.MS.gene065234.t1;Parent=MS.gene065234.t1 |
chr2.1 | exon | 17651679 | 17652129 | 17651679 | ID=MS.gene065234.t1.exon2;Parent=MS.gene065234.t1 |
chr2.1 | CDS | 17651679 | 17652129 | 17651679 | ID=cds.MS.gene065234.t1;Parent=MS.gene065234.t1 |
chr2.1 | exon | 17652214 | 17652363 | 17652214 | ID=MS.gene065234.t1.exon3;Parent=MS.gene065234.t1 |
chr2.1 | CDS | 17652214 | 17652363 | 17652214 | ID=cds.MS.gene065234.t1;Parent=MS.gene065234.t1 |
chr2.1 | exon | 17652453 | 17652734 | 17652453 | ID=MS.gene065234.t1.exon4;Parent=MS.gene065234.t1 |
chr2.1 | CDS | 17652453 | 17652734 | 17652453 | ID=cds.MS.gene065234.t1;Parent=MS.gene065234.t1 |
Gene Sequence |
Protein sequence |