AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61631


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61631.t1 MTR_4g050250 92.619 420 31 0 1 420 1 420 0.0 803
MS.gene61631.t1 MTR_8g058965 67.804 469 139 5 11 478 3 460 0.0 608
MS.gene61631.t1 MTR_8g469020 65.368 462 147 7 20 479 6 456 0.0 580
MS.gene61631.t1 MTR_8g062010 54.219 474 167 12 14 478 2 434 3.05e-157 453
MS.gene61631.t1 MTR_8g070950 53.753 493 155 14 4 479 3 439 1.63e-154 446
MS.gene61631.t1 MTR_8g062310 51.753 485 176 12 1 479 1 433 9.00e-149 432
MS.gene61631.t1 MTR_8g062080 50.806 496 179 13 1 478 1 449 1.44e-146 427
MS.gene61631.t1 MTR_8g062300 48.141 511 186 15 8 478 10 481 3.72e-132 391
MS.gene61631.t1 MTR_8g467790 49.136 405 140 15 21 418 148 493 3.09e-109 333
MS.gene61631.t1 MTR_2g083840 43.542 480 237 9 2 474 5 457 9.21e-109 330
MS.gene61631.t1 MTR_8g468810 43.852 488 227 15 6 474 4 463 3.82e-105 321
MS.gene61631.t1 MTR_8g058970 42.600 500 236 13 3 474 1 477 2.79e-102 314
MS.gene61631.t1 MTR_8g062270 40.987 466 238 11 19 473 14 453 1.50e-92 288
MS.gene61631.t1 MTR_4g032730 38.037 489 251 9 12 473 3 466 4.47e-88 277
MS.gene61631.t1 MTR_5g092960 38.901 473 257 10 12 473 10 461 1.15e-82 263
MS.gene61631.t1 MTR_8g467800 41.141 491 237 16 6 479 3 458 6.56e-82 261
MS.gene61631.t1 MTR_8g468840 41.447 456 242 11 21 472 14 448 6.47e-81 258
MS.gene61631.t1 MTR_8g468760 39.579 475 216 15 12 473 2 418 3.39e-80 255
MS.gene61631.t1 MTR_8g014260 40.215 465 238 19 21 474 16 451 2.67e-79 254
MS.gene61631.t1 MTR_8g468810 44.162 394 178 12 6 383 4 371 8.01e-79 250
MS.gene61631.t1 MTR_8g445780 40.802 424 208 14 11 427 3 390 2.18e-73 237
MS.gene61631.t1 MTR_8g468810 44.315 343 156 9 6 338 4 321 1.21e-70 228
MS.gene61631.t1 MTR_8g468810 44.248 339 154 9 6 334 4 317 1.30e-69 225
MS.gene61631.t1 MTR_8g468810 43.391 348 162 9 6 343 4 326 2.84e-69 225
MS.gene61631.t1 MTR_8g014160 35.532 470 202 15 21 474 41 425 9.74e-65 215
MS.gene61631.t1 MTR_5g092960 38.786 379 206 8 8 378 6 366 1.43e-59 201
MS.gene61631.t1 MTR_2g086020 64.557 158 55 1 322 479 164 320 1.73e-57 193
MS.gene61631.t1 MTR_2g086020 47.134 157 61 5 47 196 1 142 2.25e-31 123
MS.gene61631.t1 MTR_8g467800 41.617 334 159 12 8 333 5 310 9.63e-45 160
MS.gene61631.t1 MTR_4g024710 38.365 318 158 13 167 474 58 347 5.01e-44 158
MS.gene61631.t1 MTR_8g014210 39.669 242 133 8 235 474 1 231 2.14e-34 129
MS.gene61631.t1 MTR_8g077460 40.323 248 126 8 15 257 4 234 7.40e-34 131
MS.gene61631.t1 MTR_8g077460 47.260 146 72 4 330 474 234 375 1.38e-31 125
MS.gene61631.t1 MTR_5g021550 46.061 165 81 5 5 166 3 162 1.66e-32 122
MS.gene61631.t1 MTR_5g084070 29.258 458 263 16 20 466 12 419 5.17e-32 127
MS.gene61631.t1 MTR_4g024745 37.037 297 161 11 165 457 10 284 8.48e-32 123
MS.gene61631.t1 MTR_5g080710 29.605 456 269 17 21 466 33 446 2.94e-31 125
MS.gene61631.t1 MTR_8g014290 43.590 156 74 5 21 167 10 160 3.73e-29 112
MS.gene61631.t1 MTR_3g023630 28.326 466 228 19 18 474 5 373 2.04e-25 107
MS.gene61631.t1 MTR_7g033915 26.964 471 213 17 19 473 9 364 1.14e-24 105
MS.gene61631.t1 MTR_3g099800 57.471 87 36 1 386 471 19 105 5.04e-24 96.7
MS.gene61631.t1 MTR_4g024720 40.110 182 84 6 3 166 2 176 1.19e-22 96.3
MS.gene61631.t1 MTR_5g008920 25.380 461 249 16 21 474 9 381 1.50e-21 96.7
MS.gene61631.t1 MTR_7g115270 31.556 225 123 8 13 230 4 204 1.44e-20 94.0
MS.gene61631.t1 MTR_7g115270 33.333 138 86 3 338 471 264 399 7.04e-13 70.5
MS.gene61631.t1 MTR_4g098590 27.189 434 221 20 23 441 1 354 2.52e-20 92.8
MS.gene61631.t1 MTR_7g056447 34.272 213 111 9 14 225 2 186 2.78e-20 91.3
MS.gene61631.t1 MTR_3g108560 25.108 462 244 15 21 473 20 388 5.27e-20 92.0
MS.gene61631.t1 MTR_5g073420 32.877 219 120 10 13 228 3 197 1.78e-19 90.5
MS.gene61631.t1 MTR_1g108820 25.764 458 261 17 16 471 3 383 4.49e-19 89.4
MS.gene61631.t1 MTR_1g038710 27.655 452 283 16 7 442 5 428 2.45e-18 87.8
MS.gene61631.t1 MTR_1g041245 33.333 210 113 7 20 228 10 193 9.24e-18 85.5
MS.gene61631.t1 MTR_1g041245 31.390 223 135 7 266 474 168 386 8.35e-15 76.3
MS.gene61631.t1 MTR_7g032380 32.701 211 111 9 21 228 11 193 1.01e-17 84.7
MS.gene61631.t1 MTR_7g032380 35.075 134 81 2 346 474 224 356 2.38e-13 71.6
MS.gene61631.t1 MTR_7g098510 35.912 181 102 5 298 474 221 391 2.23e-17 84.3
MS.gene61631.t1 MTR_7g098510 29.487 234 117 8 6 228 3 199 5.46e-13 70.9
MS.gene61631.t1 MTR_7g034110 33.790 219 115 8 19 234 9 200 2.91e-17 83.6
MS.gene61631.t1 MTR_7g056433 34.615 208 109 8 21 226 12 194 3.88e-17 83.6
MS.gene61631.t1 MTR_5g058100 26.557 305 169 10 15 300 3 271 6.28e-17 82.8
MS.gene61631.t1 MTR_3g107160 26.134 463 244 18 21 474 10 383 9.43e-17 82.4
MS.gene61631.t1 MTR_4g056030 35.377 212 106 8 21 227 9 194 1.13e-16 82.8
MS.gene61631.t1 MTR_7g026500 31.034 232 126 9 3 228 1 204 1.63e-16 81.6
MS.gene61631.t1 MTR_8g085430 31.507 219 112 9 20 228 10 200 2.40e-16 80.5
MS.gene61631.t1 MTR_2g008320 25.678 479 244 20 13 474 44 427 6.82e-16 80.1
MS.gene61631.t1 MTR_4g056040 26.371 474 257 21 21 442 9 442 9.91e-16 80.1
MS.gene61631.t1 MTR_2g008310 25.870 460 245 21 21 474 2 371 2.19e-15 78.2
MS.gene61631.t1 MTR_8g014230 43.023 86 46 3 382 467 16 98 2.25e-15 72.4
MS.gene61631.t1 MTR_4g080787 24.950 497 321 17 1 476 1 466 2.97e-15 78.6
MS.gene61631.t1 MTR_5g008950 30.622 209 109 9 23 228 1 176 3.35e-15 77.4
MS.gene61631.t1 MTR_5g008950 28.502 207 117 7 288 474 170 365 9.15e-13 70.1
MS.gene61631.t1 MTR_3g108150 33.649 211 104 11 21 228 13 190 3.85e-15 77.4
MS.gene61631.t1 MTR_4g055990 26.078 487 254 20 21 442 9 454 5.61e-15 77.4
MS.gene61631.t1 MTR_4g055990 26.078 487 254 20 21 442 9 454 6.80e-15 77.4
MS.gene61631.t1 MTR_4g134150 31.278 227 105 9 21 238 14 198 1.50e-14 73.6
MS.gene61631.t1 MTR_2g007500 28.761 226 113 7 10 228 3 187 1.99e-14 74.7
MS.gene61631.t1 MTR_7g056420 34.228 149 79 5 21 168 9 139 2.48e-14 76.3
MS.gene61631.t1 MTR_7g056430 34.228 149 79 5 21 168 9 139 2.77e-14 76.3
MS.gene61631.t1 MTR_6g022390 33.600 125 79 3 21 143 5 127 2.93e-14 70.5
MS.gene61631.t1 MTR_7g032370 35.036 137 82 2 344 474 217 352 3.01e-14 74.3
MS.gene61631.t1 MTR_4g113810 36.301 146 75 4 107 248 2 133 7.72e-14 69.7
MS.gene61631.t1 MTR_3g107100 30.476 210 120 7 21 229 11 195 8.37e-14 73.6
MS.gene61631.t1 MTR_6g045333 28.182 220 133 8 13 230 53 249 1.23e-13 73.2
MS.gene61631.t1 MTR_7g055943 30.275 218 122 9 17 232 36 225 1.43e-13 72.8
MS.gene61631.t1 MTR_3g107120 25.265 471 249 18 21 475 9 392 1.45e-13 72.8
MS.gene61631.t1 MTR_7g088260 29.778 225 120 9 9 228 79 270 1.98e-13 72.8
MS.gene61631.t1 MTR_7g033945 33.149 181 101 7 19 194 9 174 2.85e-13 68.6
MS.gene61631.t1 MTR_5g061680 31.963 219 122 10 13 229 3 196 3.21e-13 70.9
MS.gene61631.t1 MTR_6g022500 30.769 208 116 6 21 226 101 282 3.37e-13 72.0
MS.gene61631.t1 MTR_7g098480 28.509 228 127 6 6 228 3 199 5.27e-13 71.2
MS.gene61631.t1 MTR_7g098480 30.055 183 113 4 295 473 217 388 8.90e-11 64.3
MS.gene61631.t1 MTR_7g098570 29.703 202 119 6 285 470 195 389 6.00e-13 71.2
MS.gene61631.t1 MTR_2g007450 31.915 235 123 10 8 226 3 216 7.19e-13 70.9
MS.gene61631.t1 MTR_5g045510 33.019 212 108 12 21 228 12 193 8.15e-13 70.1
MS.gene61631.t1 MTR_1g108820 29.858 211 119 8 16 226 3 184 8.49e-13 70.1
MS.gene61631.t1 MTR_5g058000 30.233 215 120 7 16 228 3 189 8.63e-13 70.1
MS.gene61631.t1 MTR_3g071850 31.050 219 126 10 14 230 17 212 1.13e-12 70.9
MS.gene61631.t1 MTR_5g013500 24.681 470 225 18 21 474 9 365 1.19e-12 69.7
MS.gene61631.t1 MTR_7g034115 31.579 209 114 8 20 226 10 191 2.48e-12 68.9
MS.gene61631.t1 MTR_7g034115 37.226 137 76 4 337 466 242 375 2.77e-11 65.5
MS.gene61631.t1 MTR_3g115430 42.667 75 40 1 400 474 54 125 7.32e-12 62.8
MS.gene61631.t1 MTR_7g033990 29.108 213 117 7 21 227 11 195 7.73e-12 67.4
MS.gene61631.t1 MTR_5g045170 29.717 212 117 9 23 230 16 199 1.84e-11 66.2
MS.gene61631.t1 MTR_4g024770 49.254 67 30 2 4 70 10 72 3.36e-11 59.7
MS.gene61631.t1 MTR_6g040270 33.019 212 107 11 23 229 10 191 3.49e-11 65.1
MS.gene61631.t1 MTR_4g055580 26.434 488 253 21 21 446 100 543 3.76e-11 65.9
MS.gene61631.t1 MTR_2g082800 24.888 446 257 19 7 432 17 404 4.11e-11 65.1
MS.gene61631.t1 MTR_3g036250 26.887 212 126 7 20 228 4 189 5.39e-11 64.7
MS.gene61631.t1 MTR_3g040700 27.778 216 123 10 18 228 40 227 6.18e-11 64.7
MS.gene61631.t1 MTR_7g056287 33.577 137 76 4 344 473 243 371 8.07e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61631.t1 AT5G56420 29.449 472 260 18 21 474 6 422 1.23e-26 112
MS.gene61631.t1 AT5G56420 29.449 472 260 18 21 474 6 422 1.23e-26 112
MS.gene61631.t1 AT5G56420 29.449 472 260 18 21 474 6 422 1.23e-26 112
MS.gene61631.t1 AT4G10400 28.571 462 266 18 21 473 2 408 3.69e-26 110
MS.gene61631.t1 AT4G10400 28.571 462 266 18 21 473 2 408 3.69e-26 110
MS.gene61631.t1 AT4G10400 28.571 462 266 18 21 473 2 408 3.69e-26 110
MS.gene61631.t1 AT1G69630 26.955 486 279 16 14 471 11 448 1.17e-24 106
MS.gene61631.t1 AT4G26340 27.907 473 267 18 21 474 2 419 1.22e-24 106
MS.gene61631.t1 AT1G32375 26.884 491 252 20 21 474 2 422 9.30e-23 100
MS.gene61631.t1 AT1G32375 26.884 491 252 20 21 474 2 422 9.30e-23 100
MS.gene61631.t1 AT1G78750 25.988 481 311 15 7 471 4 455 2.10e-22 100
MS.gene61631.t1 AT1G78750 25.988 481 311 15 7 471 4 455 2.10e-22 100
MS.gene61631.t1 AT1G16930 25.202 496 293 19 6 474 5 449 7.90e-22 98.2
MS.gene61631.t1 AT1G16930 25.202 496 293 19 6 474 5 449 7.90e-22 98.2
MS.gene61631.t1 AT1G16930 25.202 496 293 19 6 474 5 449 7.90e-22 98.2
MS.gene61631.t1 AT2G26030 25.153 489 274 18 21 471 4 438 1.61e-20 94.4
MS.gene61631.t1 AT2G26030 25.153 489 274 18 21 471 4 438 1.61e-20 94.4
MS.gene61631.t1 AT1G13780 26.042 480 305 17 13 471 2 452 1.62e-20 94.4
MS.gene61631.t1 AT5G53840 26.439 469 300 18 14 475 11 441 2.84e-20 93.6
MS.gene61631.t1 AT1G06630 26.882 372 241 11 18 383 9 355 6.57e-20 91.7
MS.gene61631.t1 AT1G06630 26.882 372 241 11 18 383 9 355 6.57e-20 91.7
MS.gene61631.t1 AT3G42770 26.915 457 281 17 23 466 1 417 1.08e-19 92.4
MS.gene61631.t1 AT2G26030 24.540 489 282 17 21 471 4 443 2.99e-19 90.5
MS.gene61631.t1 AT3G59200 32.381 210 115 8 21 226 7 193 6.60e-19 88.6
MS.gene61631.t1 AT5G18780 27.536 483 273 20 16 471 6 438 1.45e-18 88.2
MS.gene61631.t1 AT5G18780 27.536 483 273 20 16 471 6 438 1.45e-18 88.2
MS.gene61631.t1 AT3G50710 26.778 478 274 20 21 474 2 427 2.30e-18 87.8
MS.gene61631.t1 AT3G59200 32.381 210 115 8 21 226 7 193 2.90e-18 87.8
MS.gene61631.t1 AT1G06630 26.558 369 240 11 18 380 9 352 3.74e-18 86.7
MS.gene61631.t1 AT1G06630 26.558 369 240 11 18 380 9 352 3.74e-18 86.7
MS.gene61631.t1 AT1G06630 26.558 369 240 11 18 380 9 352 3.74e-18 86.7
MS.gene61631.t1 AT1G06630 26.558 369 240 11 18 380 9 352 3.74e-18 86.7
MS.gene61631.t1 AT1G06630 26.558 369 240 11 18 380 18 361 5.69e-18 86.3
MS.gene61631.t1 AT2G26860 28.271 428 251 14 21 433 2 388 5.94e-18 86.3
MS.gene61631.t1 AT2G26860 28.271 428 251 14 21 433 2 388 5.94e-18 86.3
MS.gene61631.t1 AT1G06630 26.829 369 239 11 18 380 9 352 5.94e-18 86.7
MS.gene61631.t1 AT5G56560 27.174 460 281 18 22 474 6 418 7.17e-18 85.9
MS.gene61631.t1 AT5G56370 25.738 474 276 18 21 473 2 420 1.54e-17 85.1
MS.gene61631.t1 AT5G56370 25.738 474 276 18 21 473 2 420 1.54e-17 85.1
MS.gene61631.t1 AT4G09920 32.524 206 114 7 21 226 2 182 3.70e-17 82.4
MS.gene61631.t1 AT4G09920 32.524 206 114 7 21 226 2 182 3.70e-17 82.4
MS.gene61631.t1 AT4G09920 32.524 206 114 7 21 226 2 182 3.70e-17 82.4
MS.gene61631.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.06e-17 82.4
MS.gene61631.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.06e-17 82.4
MS.gene61631.t1 AT5G18780 28.571 371 220 12 16 362 6 355 7.36e-17 82.8
MS.gene61631.t1 AT5G18780 28.571 371 220 12 16 362 6 355 7.36e-17 82.8
MS.gene61631.t1 AT3G26922 29.339 242 134 10 16 251 9 219 1.95e-16 80.5
MS.gene61631.t1 AT3G26922 29.339 242 134 10 16 251 9 219 1.95e-16 80.5
MS.gene61631.t1 AT1G66310 26.556 482 264 22 20 471 18 439 2.43e-16 81.6
MS.gene61631.t1 AT5G56400 24.800 500 290 19 3 474 14 455 2.80e-16 81.6
MS.gene61631.t1 AT1G66290 26.585 489 274 28 12 471 18 450 3.26e-16 81.3
MS.gene61631.t1 AT3G60040 29.787 235 143 8 21 247 13 233 4.87e-16 81.3
MS.gene61631.t1 AT3G60040 29.787 235 143 8 21 247 232 452 6.43e-16 81.3
MS.gene61631.t1 AT3G60040 29.787 235 143 8 21 247 233 453 6.66e-16 81.3
MS.gene61631.t1 AT3G60040 29.787 235 143 8 21 247 230 450 8.29e-16 80.5
MS.gene61631.t1 AT3G60040 29.787 235 143 8 21 247 232 452 9.00e-16 80.5
MS.gene61631.t1 AT5G22660 25.051 487 291 19 14 471 2 443 1.39e-15 79.3
MS.gene61631.t1 AT4G00160 28.571 497 252 25 19 476 14 446 1.69e-15 79.0
MS.gene61631.t1 AT3G52680 27.766 479 277 18 19 476 19 449 3.17e-15 78.2
MS.gene61631.t1 AT1G55030 26.174 447 247 16 8 432 5 390 3.52e-15 77.8
MS.gene61631.t1 AT5G44950 25.446 448 278 18 19 447 2 412 5.33e-15 77.4
MS.gene61631.t1 AT3G59230 26.200 500 293 23 16 472 7 473 6.77e-15 77.4
MS.gene61631.t1 AT5G60610 25.977 435 252 17 21 438 2 383 1.03e-14 76.3
MS.gene61631.t1 AT5G60610 25.977 435 252 17 21 438 2 383 1.03e-14 76.3
MS.gene61631.t1 AT2G04230 26.585 489 273 23 21 476 13 448 1.43e-14 76.3
MS.gene61631.t1 AT5G50270 28.027 446 243 22 21 441 2 394 2.70e-14 75.1
MS.gene61631.t1 AT1G55030 26.018 442 239 18 15 432 3 380 3.95e-14 74.7
MS.gene61631.t1 AT5G62970 25.657 495 263 19 28 473 10 448 5.40e-14 74.3
MS.gene61631.t1 AT5G41840 29.911 224 120 10 17 226 10 210 5.95e-14 74.7
MS.gene61631.t1 AT3G59190 31.217 189 114 6 5 191 1 175 8.88e-14 73.2
MS.gene61631.t1 AT4G14096 25.963 493 299 22 17 478 4 461 9.22e-14 73.6
MS.gene61631.t1 AT4G14096 25.963 493 299 22 17 478 4 461 9.22e-14 73.6
MS.gene61631.t1 AT3G59190 31.217 189 114 6 5 191 1 175 1.03e-13 73.6
MS.gene61631.t1 AT5G38396 28.980 245 144 9 21 255 2 226 1.20e-13 73.2
MS.gene61631.t1 AT5G56810 26.809 470 272 18 21 471 15 431 2.07e-13 72.4
MS.gene61631.t1 AT4G14103 28.283 297 163 11 17 299 4 264 2.88e-13 72.0
MS.gene61631.t1 AT4G14103 28.378 296 162 12 18 299 5 264 2.89e-13 71.6
MS.gene61631.t1 AT4G14103 28.378 296 162 12 18 299 5 264 2.89e-13 71.6
MS.gene61631.t1 AT3G58940 30.556 216 120 7 21 226 2 197 4.47e-13 72.0
MS.gene61631.t1 AT3G58940 30.556 216 120 7 21 226 2 197 4.47e-13 72.0
MS.gene61631.t1 AT1G05080 26.483 472 288 18 18 473 10 438 4.63e-13 71.2
MS.gene61631.t1 AT2G29930 24.351 501 283 24 18 473 9 458 5.26e-13 71.2
MS.gene61631.t1 AT2G29930 24.351 501 283 24 18 473 9 458 5.26e-13 71.2
MS.gene61631.t1 AT5G22700 25.983 458 271 19 2 436 27 439 6.00e-13 71.2
MS.gene61631.t1 AT5G22700 27.184 309 169 12 2 288 27 301 2.12e-12 69.3
MS.gene61631.t1 AT5G56410 24.828 435 272 14 28 441 10 410 3.91e-12 68.9
MS.gene61631.t1 AT4G00320 28.111 217 130 8 18 226 10 208 5.13e-12 68.6
MS.gene61631.t1 AT5G22720 25.688 218 135 6 10 226 12 203 6.24e-12 68.2
MS.gene61631.t1 AT1G66300 25.720 486 287 21 10 471 18 453 1.16e-11 67.0
MS.gene61631.t1 AT3G54910 27.723 404 231 16 85 474 17 373 1.37e-11 66.6
MS.gene61631.t1 AT3G54910 27.723 404 231 16 85 474 17 373 1.37e-11 66.6
MS.gene61631.t1 AT3G54910 27.723 404 231 16 85 474 17 373 1.37e-11 66.6
MS.gene61631.t1 AT4G27050 26.818 220 127 7 20 226 3 201 1.39e-11 67.0
MS.gene61631.t1 AT4G27050 26.818 220 127 7 20 226 3 201 1.39e-11 67.0
MS.gene61631.t1 AT4G27050 26.818 220 127 7 20 226 3 201 1.39e-11 67.0
MS.gene61631.t1 AT4G27050 26.818 220 127 7 20 226 3 201 1.39e-11 67.0
MS.gene61631.t1 AT4G27050 26.818 220 127 7 20 226 3 201 1.39e-11 67.0
MS.gene61631.t1 AT3G44060 27.536 207 129 5 23 229 1 186 1.82e-11 66.2
MS.gene61631.t1 AT5G22700 26.174 447 260 19 14 436 2 402 1.86e-11 66.2
MS.gene61631.t1 AT5G22700 26.174 447 260 19 14 436 2 402 1.86e-11 66.2
MS.gene61631.t1 AT5G22700 26.174 447 260 19 14 436 2 402 1.86e-11 66.2
MS.gene61631.t1 AT5G22700 26.174 447 260 19 14 436 2 402 1.86e-11 66.2
MS.gene61631.t1 AT3G52680 29.958 237 135 8 19 251 19 228 2.58e-11 65.5
MS.gene61631.t1 AT5G41830 28.571 217 129 8 18 226 10 208 2.59e-11 66.2
MS.gene61631.t1 AT5G56440 30.806 211 111 8 21 226 2 182 4.63e-11 65.1
MS.gene61631.t1 AT3G51530 25.850 441 236 20 21 433 30 407 4.78e-11 65.1
MS.gene61631.t1 AT3G58920 26.895 409 208 18 21 381 2 367 7.12e-11 64.7
MS.gene61631.t1 AT1G60400 30.252 238 134 8 17 250 10 219 9.41e-11 63.9

Find 129 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTAAATTGCGAAATTC+TGG 0.222639 4.1:+47570945 None:intergenic
TGAAAATACTACAGTCTTAT+CGG 0.259684 4.1:-47571572 MS.gene61631:intron
AGGTTGGATTCGAGACATTT+AGG 0.278823 4.1:+47570688 None:intergenic
AAACCTTGCAACTCTGAATT+AGG 0.290420 4.1:+47570844 None:intergenic
ATCTTTCGCAATTCTCTGTT+AGG 0.300707 4.1:+47571939 None:intergenic
TTCTTCTTTCTGTCGTTTAG+AGG 0.302761 4.1:+47572148 None:intergenic
GTAAATCATGGTTTCTCTTT+CGG 0.306227 4.1:+47571114 None:intergenic
GATTCAACTGTGTCTCCTTA+AGG 0.351050 4.1:-47570469 None:intergenic
TCATTACTTGCATTTCTCTC+TGG 0.365677 4.1:-47571425 MS.gene61631:CDS
GTGGCTATGGAGGTTCTTGT+TGG 0.367455 4.1:+47572050 None:intergenic
CTTCAACTCGAATCTTCTGC+TGG 0.371331 4.1:-47570901 MS.gene61631:CDS
ATGTGGCATAAGAGTGGTTC+TGG 0.375392 4.1:+47572086 None:intergenic
CTGGAGACTGTGTTGATATG+TGG 0.400388 4.1:-47571809 MS.gene61631:CDS
GAGAACTTTGGTCAAGAATC+GGG 0.407459 4.1:+47571364 None:intergenic
CATAGACGTTGTACAACTTC+AGG 0.408182 4.1:-47571462 MS.gene61631:CDS
GGAGGAGGAACCATCACCTT+TGG 0.408333 4.1:-47570740 MS.gene61631:CDS
CTGACATATGTTCACATAGA+AGG 0.408606 4.1:-47570667 MS.gene61631:CDS
GACAGAGCCCCTTGGTATAT+CGG 0.418247 4.1:+47570510 None:intergenic
TTCCTCTCGTCTCTCGTCGC+TGG 0.419361 4.1:-47572025 MS.gene61631:CDS
GACGAGAGGAAGGGTGGCTA+TGG 0.428174 4.1:+47572037 None:intergenic
CTCGTCGCTGGAACAACCTC+TGG 0.431131 4.1:-47572013 MS.gene61631:CDS
GTCAGTGAATTGCAACCTCT+TGG 0.432059 4.1:+47571328 None:intergenic
GTACCAATCTTGTTTCTCTC+AGG 0.432210 4.1:-47571686 MS.gene61631:intron
CATGGTTTCTCTTTCGGAGG+AGG 0.435109 4.1:+47571120 None:intergenic
CGAGAACTTTGGTCAAGAAT+CGG 0.438410 4.1:+47571363 None:intergenic
TGGCTATGGAGGTTCTTGTT+GGG 0.444574 4.1:+47572051 None:intergenic
GTACAATCGAAGAATGAATT+CGG 0.445873 4.1:+47571705 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.450096 4.1:+47570905 None:intergenic
ATGTCAAGTTCCACGATGCC+AGG 0.450825 4.1:+47571482 None:intergenic
TCACTGACAGGAAATTCTCT+TGG 0.450899 4.1:-47571313 MS.gene61631:CDS
TTAGGAACTATTGTTGACTT+TGG 0.451352 4.1:+47570706 None:intergenic
GAGGAGGAACCATCACCTTT+GGG 0.457008 4.1:-47570739 MS.gene61631:CDS
AAGAATGTTGAATCATCATA+TGG 0.462391 4.1:+47571543 None:intergenic
TCTTTCGCAATTCTCTGTTA+GGG 0.469521 4.1:+47571940 None:intergenic
AACCATCACCTTTGGGAACA+TGG 0.470329 4.1:-47570732 MS.gene61631:CDS
AAAGCCACGTTGGGCATCAT+TGG 0.474788 4.1:-47571221 MS.gene61631:CDS
TTCTTGTTGGGAGGAAGGAG+AGG 0.476181 4.1:+47572063 None:intergenic
GTTAGGGTTTGAGTCGGAGT+TGG 0.483850 4.1:+47571956 None:intergenic
GGAAGGTGGCACGAGAACTT+TGG 0.483968 4.1:+47571352 None:intergenic
GCCTTGAAATAGATTCCGAT+TGG 0.485787 4.1:-47571286 MS.gene61631:CDS
AGCGACGAGAGACGAGAGGA+AGG 0.496627 4.1:+47572027 None:intergenic
GATGTAAAGGACGGTGGTAG+TGG 0.497631 4.1:-47571260 MS.gene61631:CDS
AGCATCACAAAAGCCACGTT+GGG 0.499156 4.1:-47571230 MS.gene61631:CDS
TCCAATCGGAATCTATTTCA+AGG 0.501508 4.1:+47571285 None:intergenic
GTTCTGGTAGAGTGCTTAAT+CGG 0.501543 4.1:+47572102 None:intergenic
CTTCTATGTGAACATATGTC+AGG 0.503868 4.1:+47570668 None:intergenic
GGAGGTTCTTGTTGGGAGGA+AGG 0.503902 4.1:+47572058 None:intergenic
GAAGAAGCAAACAACGGCGG+AGG 0.512346 4.1:-47572131 MS.gene61631:CDS
TTCGGAGGAGGCTGAGCATA+GGG 0.513211 4.1:+47571132 None:intergenic
GACAAATTCACTTTCACGCA+TGG 0.514259 4.1:+47571157 None:intergenic
GTTCACATAGAAGGATATCA+AGG 0.515530 4.1:-47570658 MS.gene61631:CDS
GTATCAAGAGTTTCGAGTAC+GGG 0.515690 4.1:+47571398 None:intergenic
CAGTTGAATCAAATTTAAGT+TGG 0.518323 4.1:+47570482 None:intergenic
AAGTACAAGTTGAGCTCCAC+GGG 0.520114 4.1:+47571731 None:intergenic
TCCCATGTTCCCAAAGGTGA+TGG 0.522027 4.1:+47570730 None:intergenic
TTCCGATTGGATCGATGTAA+AGG 0.524026 4.1:-47571273 MS.gene61631:CDS
TTCTCTGTTAGGGTTTGAGT+CGG 0.524166 4.1:+47571950 None:intergenic
AAATTCTGGATAATTTAGAA+TGG 0.528976 4.1:+47570959 None:intergenic
TTTCGGAGGAGGCTGAGCAT+AGG 0.535888 4.1:+47571131 None:intergenic
CTATGGAGGTTCTTGTTGGG+AGG 0.536477 4.1:+47572054 None:intergenic
ATCTTCAACATCTTCAGTGA+TGG 0.536558 4.1:+47571509 None:intergenic
GCAAAAGTAGATGTAAATCA+TGG 0.538053 4.1:+47571102 None:intergenic
GTTTGAGTCGGAGTTGGTGT+CGG 0.544966 4.1:+47571962 None:intergenic
TTCAACTCGAATCTTCTGCT+GGG 0.545683 4.1:-47570900 MS.gene61631:CDS
AATCATGGTTTCTCTTTCGG+AGG 0.548045 4.1:+47571117 None:intergenic
TGGAGACTGTGTTGATATGT+GGG 0.548300 4.1:-47571808 MS.gene61631:CDS
GAGAGGAAGGGTGGCTATGG+AGG 0.548439 4.1:+47572040 None:intergenic
AGTATCAAGAGTTTCGAGTA+CGG 0.548966 4.1:+47571397 None:intergenic
GAGCGACAGTTCTTCAAGGT+GGG 0.550146 4.1:+47571767 None:intergenic
AGAGGTTGCAATTCACTGAC+AGG 0.551444 4.1:-47571325 MS.gene61631:CDS
GTCCTTTACATCGATCCAAT+CGG 0.554267 4.1:+47571271 None:intergenic
TTGGGAGGAAGGAGAGGATG+TGG 0.557034 4.1:+47572069 None:intergenic
TGGTAGAGTGCTTAATCGGT+CGG 0.558863 4.1:+47572106 None:intergenic
GCTGAATATATCTTGCGTAA+CGG 0.558924 4.1:-47570613 MS.gene61631:CDS
TCAAGGATTCGAAGAGGACC+TGG 0.560349 4.1:-47570641 MS.gene61631:CDS
ATGTGGGTCCGTGCTGCTGT+GGG 0.561915 4.1:-47571792 MS.gene61631:CDS
TATCGAGCGACAGTTCTTCA+AGG 0.562121 4.1:+47571763 None:intergenic
ACCATCACCTTTGGGAACAT+GGG 0.563155 4.1:-47570731 MS.gene61631:CDS
AGATATATTCAGCAAATGCC+AGG 0.565874 4.1:+47570623 None:intergenic
GAGCGAAACTACGATGGCGC+TGG 0.566037 4.1:-47572177 None:intergenic
TTTGCGTCATTCGACATCAA+AGG 0.568262 4.1:-47571084 MS.gene61631:intron
AAGGACGGTGGTAGTGGTAG+CGG 0.568585 4.1:-47571254 MS.gene61631:CDS
ATGAAACTTTCTAATCTCGC+GGG 0.568598 4.1:+47571866 None:intergenic
CATTGGCAACTTGCAGAGTG+TGG 0.573512 4.1:-47571204 MS.gene61631:CDS
GATGAAACTTTCTAATCTCG+CGG 0.574709 4.1:+47571865 None:intergenic
GAAGTACAAGTTGAGCTCCA+CGG 0.575981 4.1:+47571730 None:intergenic
TTCTGGATAATTTAGAATGG+AGG 0.576456 4.1:+47570962 None:intergenic
TATGTGGGTCCGTGCTGCTG+TGG 0.582491 4.1:-47571793 MS.gene61631:CDS
GCGACGAGAGACGAGAGGAA+GGG 0.584918 4.1:+47572028 None:intergenic
ACAACTTCAGGCAGACATTG+TGG 0.586457 4.1:-47571450 MS.gene61631:CDS
TATGTGAACATATGTCAGGT+TGG 0.587643 4.1:+47570672 None:intergenic
TCGTGCCACCTTCCTCCAAG+AGG 0.588448 4.1:-47571343 MS.gene61631:CDS
TCTCCTAATTCAGAGTTGCA+AGG 0.589640 4.1:-47570847 MS.gene61631:intron
AGCGACAGTTCTTCAAGGTG+GGG 0.591485 4.1:+47571768 None:intergenic
AATTGCAACCTCTTGGAGGA+AGG 0.593329 4.1:+47571335 None:intergenic
TTACCTGAGAGAAACAAGAT+TGG 0.595841 4.1:+47571683 None:intergenic
AGTGAATTGCAACCTCTTGG+AGG 0.596150 4.1:+47571331 None:intergenic
CTCGATATTGATAACTCCCG+TGG 0.602926 4.1:-47571747 MS.gene61631:CDS
ACGAGAGACGAGAGGAAGGG+TGG 0.606908 4.1:+47572031 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.607774 4.1:+47570906 None:intergenic
AAAGATTAACCGATATACCA+AGG 0.607874 4.1:-47570519 MS.gene61631:CDS
AAGATTAACCGATATACCAA+GGG 0.609206 4.1:-47570518 MS.gene61631:CDS
TTTGGCTCCCATGTTCCCAA+AGG 0.610828 4.1:+47570724 None:intergenic
TGGCATGTGACAGAGCCCCT+TGG 0.611510 4.1:+47570502 None:intergenic
AGAACTTTGGTCAAGAATCG+GGG 0.612773 4.1:+47571365 None:intergenic
TGTCAAGTTCCACGATGCCA+GGG 0.615536 4.1:+47571483 None:intergenic
GGTGTCGGAGTCGAAGTGGA+AGG 0.617064 4.1:+47571977 None:intergenic
CGAGCGACAGTTCTTCAAGG+TGG 0.617871 4.1:+47571766 None:intergenic
AGTTGGTGTCGGAGTCGAAG+TGG 0.619214 4.1:+47571973 None:intergenic
TAGCATCACAAAAGCCACGT+TGG 0.623602 4.1:-47571231 MS.gene61631:CDS
TGCAACCTCTTGGAGGAAGG+TGG 0.627014 4.1:+47571338 None:intergenic
GAGAGGATGTGGCATAAGAG+TGG 0.633363 4.1:+47572080 None:intergenic
AAAGAAGAAGCAAACAACGG+CGG 0.645665 4.1:-47572134 MS.gene61631:CDS
TTCCAGCGACGAGAGACGAG+AGG 0.647004 4.1:+47572023 None:intergenic
AGGATATCAAGGATTCGAAG+AGG 0.657505 4.1:-47570647 MS.gene61631:CDS
TATCAAGAGTTTCGAGTACG+GGG 0.658563 4.1:+47571399 None:intergenic
TGGCAACTTGCAGAGTGTGG+AGG 0.661078 4.1:-47571201 MS.gene61631:CDS
TTAGGAGAACTTGAAGCATG+TGG 0.662003 4.1:+47570862 None:intergenic
GGTGGGGTCCCACAGCAGCA+CGG 0.664345 4.1:+47571784 None:intergenic
AAGATGTTGAAGATCGACCC+TGG 0.664902 4.1:-47571500 MS.gene61631:CDS
CAGAAAGAAGAAGCAAACAA+CGG 0.668917 4.1:-47572137 MS.gene61631:CDS
GAAGATCGACCCTGGCATCG+TGG 0.672699 4.1:-47571492 MS.gene61631:CDS
TTTAGAATGGAGGTGCAAAG+TGG 0.679923 4.1:+47570972 None:intergenic
GAACTTTGGTCAAGAATCGG+GGG 0.685264 4.1:+47571366 None:intergenic
GATTGGATCGATGTAAAGGA+CGG 0.690784 4.1:-47571269 MS.gene61631:CDS
AGGCGTCGAGATGCTTCCAG+AGG 0.695614 4.1:+47571997 None:intergenic
TGGATCGATGTAAAGGACGG+TGG 0.710326 4.1:-47571266 MS.gene61631:CDS
AGATTAACCGATATACCAAG+GGG 0.738387 4.1:-47570517 MS.gene61631:CDS
GTTGCCAATGATGCCCAACG+TGG 0.746675 4.1:+47571217 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTTTGATACTTCAA+TGG - chr4.1:47572066-47572085 MS.gene61631:CDS 15.0%
!! AAATTCTGGATAATTTAGAA+TGG + chr4.1:47571679-47571698 None:intergenic 20.0%
!! AAGGTGAGATATTATTATTA+AGG - chr4.1:47571570-47571589 MS.gene61631:intron 20.0%
! AAGAATGTTGAATCATCATA+TGG + chr4.1:47571095-47571114 None:intergenic 25.0%
! CAGTTGAATCAAATTTAAGT+TGG + chr4.1:47572156-47572175 None:intergenic 25.0%
! TGATTTAAATTGCGAAATTC+TGG + chr4.1:47571693-47571712 None:intergenic 25.0%
!! CTGTAGTATTTTCAAAAGAT+AGG + chr4.1:47571057-47571076 None:intergenic 25.0%
!! TGAAAATACTACAGTCTTAT+CGG - chr4.1:47571063-47571082 MS.gene61631:intron 25.0%
!!! TAACAAGTTTTGTATGTTGA+TGG + chr4.1:47570994-47571013 None:intergenic 25.0%
AAAGATTAACCGATATACCA+AGG - chr4.1:47572116-47572135 MS.gene61631:CDS 30.0%
AAGATTAACCGATATACCAA+GGG - chr4.1:47572117-47572136 MS.gene61631:CDS 30.0%
GCAAAAGTAGATGTAAATCA+TGG + chr4.1:47571536-47571555 None:intergenic 30.0%
GTAAATCATGGTTTCTCTTT+CGG + chr4.1:47571524-47571543 None:intergenic 30.0%
GTACAATCGAAGAATGAATT+CGG + chr4.1:47570933-47570952 None:intergenic 30.0%
! TCTGATGTTTACAAGTTTTC+TGG - chr4.1:47570807-47570826 MS.gene61631:intron 30.0%
! TTCTGGATAATTTAGAATGG+AGG + chr4.1:47571676-47571695 None:intergenic 30.0%
!! TTAGGAACTATTGTTGACTT+TGG + chr4.1:47571932-47571951 None:intergenic 30.0%
AAACCTTGCAACTCTGAATT+AGG + chr4.1:47571794-47571813 None:intergenic 35.0%
AGATATATTCAGCAAATGCC+AGG + chr4.1:47572015-47572034 None:intergenic 35.0%
AGATTAACCGATATACCAAG+GGG - chr4.1:47572118-47572137 MS.gene61631:CDS 35.0%
ATCTTCAACATCTTCAGTGA+TGG + chr4.1:47571129-47571148 None:intergenic 35.0%
ATCTTTCGCAATTCTCTGTT+AGG + chr4.1:47570699-47570718 None:intergenic 35.0%
ATGAAACTTTCTAATCTCGC+GGG + chr4.1:47570772-47570791 None:intergenic 35.0%
CAGAAAGAAGAAGCAAACAA+CGG - chr4.1:47570498-47570517 MS.gene61631:CDS 35.0%
CTGACATATGTTCACATAGA+AGG - chr4.1:47571968-47571987 MS.gene61631:CDS 35.0%
CTTCTATGTGAACATATGTC+AGG + chr4.1:47571970-47571989 None:intergenic 35.0%
GATGAAACTTTCTAATCTCG+CGG + chr4.1:47570773-47570792 None:intergenic 35.0%
GCTGAATATATCTTGCGTAA+CGG - chr4.1:47572022-47572041 MS.gene61631:CDS 35.0%
GTTCACATAGAAGGATATCA+AGG - chr4.1:47571977-47571996 MS.gene61631:CDS 35.0%
TATGTGAACATATGTCAGGT+TGG + chr4.1:47571966-47571985 None:intergenic 35.0%
TCATTACTTGCATTTCTCTC+TGG - chr4.1:47571210-47571229 MS.gene61631:CDS 35.0%
TCCAATCGGAATCTATTTCA+AGG + chr4.1:47571353-47571372 None:intergenic 35.0%
TCTTTCGCAATTCTCTGTTA+GGG + chr4.1:47570698-47570717 None:intergenic 35.0%
TTACCTGAGAGAAACAAGAT+TGG + chr4.1:47570955-47570974 None:intergenic 35.0%
! AGTATCAAGAGTTTCGAGTA+CGG + chr4.1:47571241-47571260 None:intergenic 35.0%
! TTCTTCTTTCTGTCGTTTAG+AGG + chr4.1:47570490-47570509 None:intergenic 35.0%
!! CAAGTTTTGTATGTTGATGG+TGG + chr4.1:47570991-47571010 None:intergenic 35.0%
AAAGAAGAAGCAAACAACGG+CGG - chr4.1:47570501-47570520 MS.gene61631:CDS 40.0%
AATCATGGTTTCTCTTTCGG+AGG + chr4.1:47571521-47571540 None:intergenic 40.0%
ACGTCTTGTGCACAAAACAA+GGG + chr4.1:47571641-47571660 None:intergenic 40.0%
AGAACTTTGGTCAAGAATCG+GGG + chr4.1:47571273-47571292 None:intergenic 40.0%
AGGATATCAAGGATTCGAAG+AGG - chr4.1:47571988-47572007 MS.gene61631:CDS 40.0%
AGGTTGGATTCGAGACATTT+AGG + chr4.1:47571950-47571969 None:intergenic 40.0%
CATAGACGTTGTACAACTTC+AGG - chr4.1:47571173-47571192 MS.gene61631:CDS 40.0%
CGAGAACTTTGGTCAAGAAT+CGG + chr4.1:47571275-47571294 None:intergenic 40.0%
GACAAATTCACTTTCACGCA+TGG + chr4.1:47571481-47571500 None:intergenic 40.0%
GAGAACTTTGGTCAAGAATC+GGG + chr4.1:47571274-47571293 None:intergenic 40.0%
GATTGGATCGATGTAAAGGA+CGG - chr4.1:47571366-47571385 MS.gene61631:CDS 40.0%
GCCTTGAAATAGATTCCGAT+TGG - chr4.1:47571349-47571368 MS.gene61631:CDS 40.0%
GTCCTTTACATCGATCCAAT+CGG + chr4.1:47571367-47571386 None:intergenic 40.0%
TCACTGACAGGAAATTCTCT+TGG - chr4.1:47571322-47571341 MS.gene61631:CDS 40.0%
TCTCCTAATTCAGAGTTGCA+AGG - chr4.1:47571788-47571807 MS.gene61631:CDS 40.0%
TTAGGAGAACTTGAAGCATG+TGG + chr4.1:47571776-47571795 None:intergenic 40.0%
TTCAACTCGAATCTTCTGCT+GGG - chr4.1:47571735-47571754 MS.gene61631:CDS 40.0%
TTCCGATTGGATCGATGTAA+AGG - chr4.1:47571362-47571381 MS.gene61631:CDS 40.0%
TTCTCTGTTAGGGTTTGAGT+CGG + chr4.1:47570688-47570707 None:intergenic 40.0%
TTTGCGTCATTCGACATCAA+AGG - chr4.1:47571551-47571570 MS.gene61631:CDS 40.0%
! GTACCAATCTTGTTTCTCTC+AGG - chr4.1:47570949-47570968 MS.gene61631:CDS 40.0%
! GTATCAAGAGTTTCGAGTAC+GGG + chr4.1:47571240-47571259 None:intergenic 40.0%
! GTTCTGGTAGAGTGCTTAAT+CGG + chr4.1:47570536-47570555 None:intergenic 40.0%
! TATCAAGAGTTTCGAGTACG+GGG + chr4.1:47571239-47571258 None:intergenic 40.0%
! TGGAGACTGTGTTGATATGT+GGG - chr4.1:47570827-47570846 MS.gene61631:intron 40.0%
! TTTAGAATGGAGGTGCAAAG+TGG + chr4.1:47571666-47571685 None:intergenic 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr4.1:47571732-47571751 None:intergenic 40.0%
AAGATGTTGAAGATCGACCC+TGG - chr4.1:47571135-47571154 MS.gene61631:CDS 45.0%
AATTGCAACCTCTTGGAGGA+AGG + chr4.1:47571303-47571322 None:intergenic 45.0%
ACAACTTCAGGCAGACATTG+TGG - chr4.1:47571185-47571204 MS.gene61631:CDS 45.0%
AGAGGTTGCAATTCACTGAC+AGG - chr4.1:47571310-47571329 MS.gene61631:CDS 45.0%
AGCATCACAAAAGCCACGTT+GGG - chr4.1:47571405-47571424 MS.gene61631:CDS 45.0%
AGTGAATTGCAACCTCTTGG+AGG + chr4.1:47571307-47571326 None:intergenic 45.0%
ATGTGGCATAAGAGTGGTTC+TGG + chr4.1:47570552-47570571 None:intergenic 45.0%
CACGTCTTGTGCACAAAACA+AGG + chr4.1:47571642-47571661 None:intergenic 45.0%
CTTCAACTCGAATCTTCTGC+TGG - chr4.1:47571734-47571753 MS.gene61631:CDS 45.0%
CTTGTGCACAAAACAAGGGA+GGG + chr4.1:47571637-47571656 None:intergenic 45.0%
GAACTTTGGTCAAGAATCGG+GGG + chr4.1:47571272-47571291 None:intergenic 45.0%
GTCAGTGAATTGCAACCTCT+TGG + chr4.1:47571310-47571329 None:intergenic 45.0%
TAGCATCACAAAAGCCACGT+TGG - chr4.1:47571404-47571423 MS.gene61631:CDS 45.0%
TATCGAGCGACAGTTCTTCA+AGG + chr4.1:47570875-47570894 None:intergenic 45.0%
TCATTGTGTCCCTTGTTGGT+AGG - chr4.1:47571874-47571893 MS.gene61631:CDS 45.0%
TCTTGTGCACAAAACAAGGG+AGG + chr4.1:47571638-47571657 None:intergenic 45.0%
TGAGTCATTGTGTCCCTTGT+TGG - chr4.1:47571870-47571889 MS.gene61631:CDS 45.0%
TGGCTATGGAGGTTCTTGTT+GGG + chr4.1:47570587-47570606 None:intergenic 45.0%
! AACCATCACCTTTGGGAACA+TGG - chr4.1:47571903-47571922 MS.gene61631:CDS 45.0%
! AAGTACAAGTTGAGCTCCAC+GGG + chr4.1:47570907-47570926 None:intergenic 45.0%
! ACCATCACCTTTGGGAACAT+GGG - chr4.1:47571904-47571923 MS.gene61631:CDS 45.0%
! CTCGATATTGATAACTCCCG+TGG - chr4.1:47570888-47570907 MS.gene61631:CDS 45.0%
! CTGGAGACTGTGTTGATATG+TGG - chr4.1:47570826-47570845 MS.gene61631:intron 45.0%
! GAAGTACAAGTTGAGCTCCA+CGG + chr4.1:47570908-47570927 None:intergenic 45.0%
! TGGTAGAGTGCTTAATCGGT+CGG + chr4.1:47570532-47570551 None:intergenic 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr4.1:47571733-47571752 None:intergenic 45.0%
!!! CTTGTTTTGTGCACAAGACG+TGG - chr4.1:47571640-47571659 MS.gene61631:intron 45.0%
AAAGCCACGTTGGGCATCAT+TGG - chr4.1:47571414-47571433 MS.gene61631:CDS 50.0%
AGCGACAGTTCTTCAAGGTG+GGG + chr4.1:47570870-47570889 None:intergenic 50.0%
ATGTCAAGTTCCACGATGCC+AGG + chr4.1:47571156-47571175 None:intergenic 50.0%
CATGGTTTCTCTTTCGGAGG+AGG + chr4.1:47571518-47571537 None:intergenic 50.0%
CATTGGCAACTTGCAGAGTG+TGG - chr4.1:47571431-47571450 MS.gene61631:CDS 50.0%
CTATGGAGGTTCTTGTTGGG+AGG + chr4.1:47570584-47570603 None:intergenic 50.0%
GACAGAGCCCCTTGGTATAT+CGG + chr4.1:47572128-47572147 None:intergenic 50.0%
GAGAGGATGTGGCATAAGAG+TGG + chr4.1:47570558-47570577 None:intergenic 50.0%
GAGCGACAGTTCTTCAAGGT+GGG + chr4.1:47570871-47570890 None:intergenic 50.0%
GAGGAGGAACCATCACCTTT+GGG - chr4.1:47571896-47571915 MS.gene61631:CDS 50.0%
GATGTAAAGGACGGTGGTAG+TGG - chr4.1:47571375-47571394 MS.gene61631:CDS 50.0%
GTGGCTATGGAGGTTCTTGT+TGG + chr4.1:47570588-47570607 None:intergenic 50.0%
GTTAGGGTTTGAGTCGGAGT+TGG + chr4.1:47570682-47570701 None:intergenic 50.0%
GTTCCTCCTCCTACCAACAA+GGG + chr4.1:47571886-47571905 None:intergenic 50.0%
TCAAGGATTCGAAGAGGACC+TGG - chr4.1:47571994-47572013 MS.gene61631:CDS 50.0%
TCCCATGTTCCCAAAGGTGA+TGG + chr4.1:47571908-47571927 None:intergenic 50.0%
TGGATCGATGTAAAGGACGG+TGG - chr4.1:47571369-47571388 MS.gene61631:CDS 50.0%
TGTCAAGTTCCACGATGCCA+GGG + chr4.1:47571155-47571174 None:intergenic 50.0%
TTCTTGTTGGGAGGAAGGAG+AGG + chr4.1:47570575-47570594 None:intergenic 50.0%
! TTGTGTCCCTTGTTGGTAGG+AGG - chr4.1:47571877-47571896 MS.gene61631:CDS 50.0%
! TTTGGCTCCCATGTTCCCAA+AGG + chr4.1:47571914-47571933 None:intergenic 50.0%
!! GTTTGAGTCGGAGTTGGTGT+CGG + chr4.1:47570676-47570695 None:intergenic 50.0%
CGAGCGACAGTTCTTCAAGG+TGG + chr4.1:47570872-47570891 None:intergenic 55.0%
GAAGAAGCAAACAACGGCGG+AGG - chr4.1:47570504-47570523 MS.gene61631:CDS 55.0%
GGAAGGTGGCACGAGAACTT+TGG + chr4.1:47571286-47571305 None:intergenic 55.0%
GGAGGAGGAACCATCACCTT+TGG - chr4.1:47571895-47571914 MS.gene61631:CDS 55.0%
GGAGGTTCTTGTTGGGAGGA+AGG + chr4.1:47570580-47570599 None:intergenic 55.0%
GGTTCCTCCTCCTACCAACA+AGG + chr4.1:47571887-47571906 None:intergenic 55.0%
GTTGCCAATGATGCCCAACG+TGG + chr4.1:47571421-47571440 None:intergenic 55.0%
TGCAACCTCTTGGAGGAAGG+TGG + chr4.1:47571300-47571319 None:intergenic 55.0%
TGGCAACTTGCAGAGTGTGG+AGG - chr4.1:47571434-47571453 MS.gene61631:CDS 55.0%
TTCGGAGGAGGCTGAGCATA+GGG + chr4.1:47571506-47571525 None:intergenic 55.0%
TTGGGAGGAAGGAGAGGATG+TGG + chr4.1:47570569-47570588 None:intergenic 55.0%
TTTCGGAGGAGGCTGAGCAT+AGG + chr4.1:47571507-47571526 None:intergenic 55.0%
! TGTCCCTTGTTGGTAGGAGG+AGG - chr4.1:47571880-47571899 MS.gene61631:CDS 55.0%
!! AAGGACGGTGGTAGTGGTAG+CGG - chr4.1:47571381-47571400 MS.gene61631:CDS 55.0%
!! AGTTGGTGTCGGAGTCGAAG+TGG + chr4.1:47570665-47570684 None:intergenic 55.0%
ACGAGAGACGAGAGGAAGGG+TGG + chr4.1:47570607-47570626 None:intergenic 60.0%
AGCGACGAGAGACGAGAGGA+AGG + chr4.1:47570611-47570630 None:intergenic 60.0%
CTCGTCGCTGGAACAACCTC+TGG - chr4.1:47570622-47570641 MS.gene61631:CDS 60.0%
GAAGATCGACCCTGGCATCG+TGG - chr4.1:47571143-47571162 MS.gene61631:CDS 60.0%
GACGAGAGGAAGGGTGGCTA+TGG + chr4.1:47570601-47570620 None:intergenic 60.0%
GAGAGGAAGGGTGGCTATGG+AGG + chr4.1:47570598-47570617 None:intergenic 60.0%
GCGACGAGAGACGAGAGGAA+GGG + chr4.1:47570610-47570629 None:intergenic 60.0%
TCGTGCCACCTTCCTCCAAG+AGG - chr4.1:47571292-47571311 MS.gene61631:CDS 60.0%
TGGCATGTGACAGAGCCCCT+TGG + chr4.1:47572136-47572155 None:intergenic 60.0%
TTCCAGCGACGAGAGACGAG+AGG + chr4.1:47570615-47570634 None:intergenic 60.0%
TTCCTCTCGTCTCTCGTCGC+TGG - chr4.1:47570610-47570629 MS.gene61631:CDS 60.0%
! ATGTGGGTCCGTGCTGCTGT+GGG - chr4.1:47570843-47570862 MS.gene61631:intron 60.0%
! GGTGTCGGAGTCGAAGTGGA+AGG + chr4.1:47570661-47570680 None:intergenic 60.0%
! TATGTGGGTCCGTGCTGCTG+TGG - chr4.1:47570842-47570861 MS.gene61631:intron 60.0%
!! AGGCGTCGAGATGCTTCCAG+AGG + chr4.1:47570641-47570660 None:intergenic 60.0%
GGTGGGGTCCCACAGCAGCA+CGG + chr4.1:47570854-47570873 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 47570471 47572186 47570471 ID=MS.gene61631
chr4.1 mRNA 47570471 47572186 47570471 ID=MS.gene61631.t1;Parent=MS.gene61631
chr4.1 exon 47571687 47572186 47571687 ID=MS.gene61631.t1.exon1;Parent=MS.gene61631.t1
chr4.1 CDS 47571687 47572186 47571687 ID=cds.MS.gene61631.t1;Parent=MS.gene61631.t1
chr4.1 exon 47571085 47571580 47571085 ID=MS.gene61631.t1.exon2;Parent=MS.gene61631.t1
chr4.1 CDS 47571085 47571580 47571085 ID=cds.MS.gene61631.t1;Parent=MS.gene61631.t1
chr4.1 exon 47570848 47571000 47570848 ID=MS.gene61631.t1.exon3;Parent=MS.gene61631.t1
chr4.1 CDS 47570848 47571000 47570848 ID=cds.MS.gene61631.t1;Parent=MS.gene61631.t1
chr4.1 exon 47570471 47570761 47570471 ID=MS.gene61631.t1.exon4;Parent=MS.gene61631.t1
chr4.1 CDS 47570471 47570761 47570471 ID=cds.MS.gene61631.t1;Parent=MS.gene61631.t1
Gene Sequence

>MS.gene61631

ATGGCGCTGGAGTTAACCTCTAAACGACAGAAAGAAGAAGCAAACAACGGCGGAGGCACCGACCGATTAAGCACTCTACCAGAACCACTCTTATGCCACATCCTCTCCTTCCTCCCAACAAGAACCTCCATAGCCACCCTTCCTCTCGTCTCTCGTCGCTGGAACAACCTCTGGAAGCATCTCGACGCCTTCCACTTCGACTCCGACACCAACTCCGACTCAAACCCTAACAGAGAATTGCGAAAGATTTTCAAAAGATTTGCGTTCTTCGTCAACGCAGTGCTCTCGCTTCGAAAATCCCGCGAGATTAGAAAGTTTCATCTAAGCTGCAGTATCTCTGATGTTTACAAGTTTTCTGGAGACTGTGTTGATATGTGGGTCCGTGCTGCTGTGGGACCCCACCTTGAAGAACTGTCGCTCGATATTGATAACTCCCGTGGAGCTCAACTTGTACTTCTTCCGAATTCATTCTTCGATTGTACCAATCTTGTTTCTCTCAGGTAACTTCATTTTCATGCCACCATCAACATACAAAACTTGTTACTAATAAAAGCTGATATATTATACATAGAATGTTATGTAACCTATCTTTTGAAAATACTACAGTCTTATCGGTTCAATCCATATGATGATTCAACATTCTTCAGTTCATTTTCCATCACTGAAGATGTTGAAGATCGACCCTGGCATCGTGGAACTTGACATAGACGTTGTACAACTTCAGGCAGACATTGTGGATTCATTACTTGCATTTCTCTCTGGTTGCCCCGTACTCGAAACTCTTGATACTTATTTTGACCCCCGATTCTTGACCAAAGTTCTCGTGCCACCTTCCTCCAAGAGGTTGCAATTCACTGACAGGAAATTCTCTTGGACTTGCCTTGAAATAGATTCCGATTGGATCGATGTAAAGGACGGTGGTAGTGGTAGCGGTAGCATCACAAAAGCCACGTTGGGCATCATTGGCAACTTGCAGAGTGTGGAGGAAGCATATCTTGATGTCTTTTCCATGCGTGAAAGTGAATTTGTCGACCCTATGCTCAGCCTCCTCCGAAAGAGAAACCATGATTTACATCTACTTTTGCGTCATTCGACATCAAAGGTGAGATATTATTATTAAGGTTTATATGTATTTATATATGTAGTTTTGTACTAATATTGTGCCCTCCCTTGTTTTGTGCACAAGACGTGGCCACTTTGCACCTCCATTCTAAATTATCCAGAATTTCGCAATTTAAATCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGCTGGGCGTGCTTGAGAAATGCCACATGCTTCAAGTTCTCCTAATTCAGAGTTGCAAGGTTTGTTGAGTTCTTGAGTTCAATCAAATGTATGTATCTATACACACACAAATATATTTTTGAGTCATTGTGTCCCTTGTTGGTAGGAGGAGGAACCATCACCTTTGGGAACATGGGAGCCAAAGTCAACAATAGTTCCTAAATGTCTCGAATCCAACCTGACATATGTTCACATAGAAGGATATCAAGGATTCGAAGAGGACCTGGCATTTGCTGAATATATCTTGCGTAACGGATTTGTTTTGCACACAATGCTTATATTTTTTGATACTTCAATGGATCTAACTAACAAGTATCGTTCACTCAAAAGATTAACCGATATACCAAGGGGCTCTGTCACATGCCAACTTAAATTTGATTCAACTGTGTCTCCTTAA

Protein sequence

>MS.gene61631.t1

MALELTSKRQKEEANNGGGTDRLSTLPEPLLCHILSFLPTRTSIATLPLVSRRWNNLWKHLDAFHFDSDTNSDSNPNRELRKIFKRFAFFVNAVLSLRKSREIRKFHLSCSISDVYKFSGDCVDMWVRAAVGPHLEELSLDIDNSRGAQLVLLPNSFFDCTNLVSLSLIGSIHMMIQHSSVHFPSLKMLKIDPGIVELDIDVVQLQADIVDSLLAFLSGCPVLETLDTYFDPRFLTKVLVPPSSKRLQFTDRKFSWTCLEIDSDWIDVKDGGSGSGSITKATLGIIGNLQSVEEAYLDVFSMRESEFVDPMLSLLRKRNHDLHLLLRHSTSKTWPLCTSILNYPEFRNLNHLKFILPCFNSNLLLGVLEKCHMLQVLLIQSCKEEEPSPLGTWEPKSTIVPKCLESNLTYVHIEGYQGFEEDLAFAEYILRNGFVLHTMLIFFDTSMDLTNKYRSLKRLTDIPRGSVTCQLKFDSTVSP