Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30045.t1 | GAU25865.1 | 51.6 | 287 | 125 | 6 | 4 | 284 | 54 | 332 | 5.70E-65 | 258.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30045.t1 | Q8H1R7 | 26.7 | 311 | 165 | 12 | 11 | 272 | 58 | 354 | 5.5e-08 | 60.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30045.t1 | A0A2Z6MQH4 | 51.6 | 287 | 125 | 6 | 4 | 284 | 54 | 332 | 4.1e-65 | 258.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30045.t1 | MTR_7g034090 | 47.667 | 300 | 71 | 10 | 4 | 300 | 60 | 276 | 3.25e-67 | 217 |
MS.gene30045.t1 | MTR_3g107120 | 41.993 | 281 | 130 | 10 | 11 | 279 | 79 | 338 | 2.25e-48 | 167 |
MS.gene30045.t1 | MTR_3g107160 | 38.000 | 300 | 163 | 8 | 7 | 297 | 63 | 348 | 1.58e-47 | 165 |
MS.gene30045.t1 | MTR_2g007450 | 38.141 | 312 | 146 | 10 | 5 | 281 | 69 | 368 | 1.52e-46 | 163 |
MS.gene30045.t1 | MTR_3g107100 | 40.645 | 310 | 145 | 14 | 5 | 300 | 63 | 347 | 1.39e-43 | 155 |
MS.gene30045.t1 | MTR_1g053025 | 38.000 | 300 | 153 | 12 | 1 | 281 | 52 | 337 | 6.89e-40 | 144 |
MS.gene30045.t1 | MTR_2g007400 | 34.951 | 309 | 157 | 12 | 4 | 286 | 63 | 353 | 1.57e-36 | 136 |
MS.gene30045.t1 | MTR_3g026920 | 35.294 | 306 | 133 | 9 | 10 | 277 | 76 | 354 | 1.30e-34 | 130 |
MS.gene30045.t1 | MTR_2g007500 | 34.483 | 290 | 143 | 10 | 4 | 275 | 65 | 325 | 2.90e-32 | 123 |
MS.gene30045.t1 | MTR_7g075820 | 31.138 | 334 | 186 | 11 | 3 | 311 | 56 | 370 | 1.19e-31 | 122 |
MS.gene30045.t1 | MTR_4g098590 | 35.211 | 284 | 153 | 9 | 9 | 275 | 55 | 324 | 2.07e-31 | 121 |
MS.gene30045.t1 | MTR_2g008320 | 34.386 | 285 | 157 | 12 | 4 | 277 | 103 | 368 | 3.22e-29 | 117 |
MS.gene30045.t1 | MTR_7g034120 | 33.948 | 271 | 148 | 10 | 19 | 277 | 1 | 252 | 3.55e-29 | 114 |
MS.gene30045.t1 | MTR_7g007080 | 33.935 | 277 | 163 | 7 | 11 | 279 | 62 | 326 | 5.76e-28 | 112 |
MS.gene30045.t1 | MTR_2g005990 | 31.464 | 321 | 178 | 13 | 2 | 300 | 58 | 358 | 2.85e-27 | 110 |
MS.gene30045.t1 | MTR_2g008310 | 33.333 | 297 | 139 | 9 | 4 | 277 | 53 | 313 | 8.99e-27 | 109 |
MS.gene30045.t1 | MTR_5g083890 | 32.551 | 341 | 178 | 16 | 4 | 311 | 57 | 378 | 1.33e-26 | 110 |
MS.gene30045.t1 | MTR_3g107140 | 47.333 | 150 | 68 | 5 | 4 | 147 | 52 | 196 | 2.62e-26 | 103 |
MS.gene30045.t1 | MTR_7g055943 | 32.384 | 281 | 166 | 9 | 7 | 280 | 94 | 357 | 8.09e-26 | 107 |
MS.gene30045.t1 | MTR_7g033915 | 31.295 | 278 | 144 | 9 | 11 | 278 | 66 | 306 | 1.30e-25 | 105 |
MS.gene30045.t1 | MTR_7g083740 | 31.900 | 279 | 148 | 10 | 4 | 277 | 68 | 309 | 1.72e-25 | 105 |
MS.gene30045.t1 | MTR_3g099830 | 31.579 | 323 | 171 | 11 | 4 | 311 | 63 | 350 | 1.82e-25 | 105 |
MS.gene30045.t1 | MTR_5g058000 | 33.808 | 281 | 157 | 9 | 4 | 279 | 59 | 315 | 7.18e-25 | 103 |
MS.gene30045.t1 | MTR_7g098570 | 32.765 | 293 | 168 | 11 | 2 | 286 | 68 | 339 | 1.07e-23 | 101 |
MS.gene30045.t1 | MTR_1g107385 | 33.236 | 343 | 173 | 17 | 1 | 311 | 81 | 399 | 1.25e-23 | 100 |
MS.gene30045.t1 | MTR_7g056433 | 32.746 | 284 | 152 | 11 | 11 | 277 | 67 | 328 | 1.65e-23 | 100 |
MS.gene30045.t1 | MTR_5g058100 | 32.000 | 275 | 166 | 9 | 10 | 279 | 66 | 324 | 3.54e-23 | 99.4 |
MS.gene30045.t1 | MTR_7g033990 | 30.847 | 295 | 157 | 12 | 2 | 278 | 59 | 324 | 4.52e-23 | 99.4 |
MS.gene30045.t1 | MTR_1g041245 | 31.803 | 305 | 168 | 16 | 11 | 300 | 66 | 345 | 1.82e-22 | 97.1 |
MS.gene30045.t1 | MTR_7g032370 | 30.796 | 289 | 154 | 11 | 11 | 288 | 45 | 298 | 2.67e-22 | 96.3 |
MS.gene30045.t1 | MTR_3g040700 | 33.333 | 285 | 146 | 13 | 4 | 275 | 91 | 344 | 4.17e-22 | 96.7 |
MS.gene30045.t1 | MTR_1g108820 | 30.405 | 296 | 155 | 9 | 4 | 277 | 59 | 325 | 5.89e-22 | 95.9 |
MS.gene30045.t1 | MTR_4g039440 | 30.249 | 281 | 169 | 10 | 10 | 279 | 86 | 350 | 7.13e-22 | 95.9 |
MS.gene30045.t1 | MTR_7g088260 | 31.507 | 292 | 164 | 13 | 11 | 290 | 146 | 413 | 7.17e-22 | 96.3 |
MS.gene30045.t1 | MTR_3g108150 | 33.571 | 280 | 156 | 12 | 11 | 279 | 68 | 328 | 8.12e-22 | 95.5 |
MS.gene30045.t1 | MTR_7g098480 | 34.915 | 295 | 157 | 14 | 5 | 286 | 63 | 335 | 9.87e-22 | 95.9 |
MS.gene30045.t1 | MTR_6g045333 | 31.227 | 269 | 171 | 8 | 17 | 279 | 127 | 387 | 1.10e-21 | 95.5 |
MS.gene30045.t1 | MTR_1g085120 | 31.802 | 283 | 173 | 9 | 4 | 279 | 143 | 412 | 2.01e-21 | 95.1 |
MS.gene30045.t1 | MTR_0009s0080 | 34.420 | 276 | 164 | 9 | 11 | 279 | 76 | 341 | 2.15e-21 | 94.7 |
MS.gene30045.t1 | MTR_1g066830 | 32.246 | 276 | 168 | 8 | 10 | 279 | 65 | 327 | 2.77e-21 | 94.0 |
MS.gene30045.t1 | MTR_1g085120 | 31.802 | 283 | 173 | 9 | 4 | 279 | 218 | 487 | 2.91e-21 | 94.7 |
MS.gene30045.t1 | MTR_7g098510 | 30.241 | 291 | 162 | 10 | 11 | 286 | 73 | 337 | 4.71e-21 | 93.2 |
MS.gene30045.t1 | MTR_6g022360 | 34.188 | 234 | 135 | 8 | 11 | 236 | 88 | 310 | 6.07e-21 | 93.2 |
MS.gene30045.t1 | MTR_5g007410 | 31.646 | 237 | 148 | 7 | 48 | 279 | 122 | 349 | 6.55e-21 | 93.2 |
MS.gene30045.t1 | MTR_5g073420 | 33.096 | 281 | 156 | 11 | 10 | 285 | 69 | 322 | 7.77e-21 | 92.4 |
MS.gene30045.t1 | MTR_5g045170 | 31.489 | 235 | 141 | 7 | 50 | 277 | 109 | 330 | 8.34e-21 | 92.4 |
MS.gene30045.t1 | MTR_5g073340 | 30.932 | 236 | 146 | 7 | 46 | 274 | 75 | 300 | 1.44e-20 | 90.9 |
MS.gene30045.t1 | MTR_5g061680 | 34.632 | 231 | 113 | 7 | 11 | 236 | 67 | 264 | 1.07e-19 | 88.6 |
MS.gene30045.t1 | MTR_6g040270 | 28.938 | 273 | 171 | 9 | 11 | 279 | 66 | 319 | 1.64e-19 | 88.6 |
MS.gene30045.t1 | MTR_6g011460 | 32.862 | 283 | 165 | 11 | 4 | 280 | 97 | 360 | 1.92e-19 | 89.0 |
MS.gene30045.t1 | MTR_6g022500 | 31.295 | 278 | 164 | 11 | 10 | 280 | 161 | 418 | 2.06e-19 | 89.0 |
MS.gene30045.t1 | MTR_7g075800 | 29.964 | 277 | 138 | 11 | 50 | 281 | 104 | 369 | 2.21e-19 | 89.4 |
MS.gene30045.t1 | MTR_3g036250 | 32.746 | 284 | 150 | 12 | 4 | 275 | 53 | 307 | 2.62e-19 | 87.8 |
MS.gene30045.t1 | MTR_0492s0020 | 32.000 | 275 | 163 | 9 | 10 | 281 | 140 | 393 | 2.70e-19 | 88.6 |
MS.gene30045.t1 | MTR_3g071850 | 29.537 | 281 | 180 | 9 | 7 | 279 | 80 | 350 | 3.43e-19 | 89.0 |
MS.gene30045.t1 | MTR_0543s0010 | 32.000 | 275 | 163 | 9 | 10 | 281 | 140 | 393 | 3.44e-19 | 88.2 |
MS.gene30045.t1 | MTR_1089s0010 | 29.137 | 278 | 174 | 8 | 24 | 297 | 77 | 335 | 6.79e-19 | 87.0 |
MS.gene30045.t1 | MTR_1g085120 | 31.579 | 247 | 155 | 7 | 4 | 243 | 230 | 469 | 1.04e-18 | 87.0 |
MS.gene30045.t1 | MTR_2g036470 | 31.120 | 241 | 142 | 8 | 46 | 277 | 110 | 335 | 1.86e-18 | 85.9 |
MS.gene30045.t1 | MTR_7g032380 | 29.577 | 284 | 142 | 12 | 11 | 284 | 66 | 301 | 5.18e-18 | 84.0 |
MS.gene30045.t1 | MTR_5g031970 | 28.881 | 277 | 158 | 8 | 8 | 279 | 55 | 297 | 1.10e-17 | 83.2 |
MS.gene30045.t1 | MTR_2g007360 | 29.866 | 298 | 154 | 11 | 5 | 286 | 64 | 322 | 2.14e-17 | 82.4 |
MS.gene30045.t1 | MTR_7g007340 | 33.333 | 228 | 118 | 8 | 68 | 286 | 105 | 307 | 2.43e-17 | 82.4 |
MS.gene30045.t1 | MTR_1g108820 | 30.534 | 262 | 139 | 8 | 4 | 243 | 59 | 299 | 2.55e-17 | 82.0 |
MS.gene30045.t1 | MTR_3g108560 | 29.710 | 276 | 175 | 7 | 9 | 281 | 73 | 332 | 5.11e-17 | 81.6 |
MS.gene30045.t1 | MTR_7g026500 | 30.108 | 279 | 136 | 14 | 27 | 277 | 89 | 336 | 5.49e-17 | 81.6 |
MS.gene30045.t1 | MTR_3g082890 | 29.966 | 297 | 167 | 10 | 5 | 275 | 143 | 424 | 6.23e-17 | 81.6 |
MS.gene30045.t1 | MTR_7g115270 | 30.314 | 287 | 164 | 10 | 11 | 275 | 67 | 339 | 9.79e-17 | 80.9 |
MS.gene30045.t1 | MTR_7g056280 | 30.729 | 192 | 108 | 7 | 122 | 297 | 367 | 549 | 4.14e-16 | 79.7 |
MS.gene30045.t1 | MTR_7g034115 | 30.640 | 297 | 169 | 14 | 4 | 287 | 59 | 331 | 6.63e-16 | 78.2 |
MS.gene30045.t1 | MTR_5g076150 | 34.359 | 195 | 105 | 8 | 61 | 238 | 14 | 202 | 9.01e-16 | 75.9 |
MS.gene30045.t1 | MTR_7g056420 | 30.882 | 272 | 148 | 9 | 11 | 275 | 64 | 302 | 1.78e-15 | 77.8 |
MS.gene30045.t1 | MTR_7g056430 | 30.882 | 272 | 148 | 9 | 11 | 275 | 64 | 302 | 2.79e-15 | 77.4 |
MS.gene30045.t1 | MTR_3g106960 | 34.483 | 174 | 99 | 6 | 128 | 297 | 1 | 163 | 3.15e-15 | 74.3 |
MS.gene30045.t1 | MTR_7g056287 | 31.047 | 277 | 162 | 13 | 9 | 279 | 60 | 313 | 6.95e-15 | 75.1 |
MS.gene30045.t1 | MTR_3g082890 | 29.389 | 262 | 152 | 8 | 5 | 243 | 63 | 314 | 1.18e-14 | 74.7 |
MS.gene30045.t1 | MTR_6g022520 | 31.907 | 257 | 159 | 8 | 27 | 279 | 10 | 254 | 1.38e-14 | 73.9 |
MS.gene30045.t1 | MTR_5g073370 | 32.864 | 213 | 123 | 7 | 69 | 278 | 126 | 321 | 1.60e-14 | 74.3 |
MS.gene30045.t1 | MTR_3g108560 | 28.992 | 238 | 154 | 6 | 9 | 243 | 73 | 298 | 1.03e-13 | 71.2 |
MS.gene30045.t1 | MTR_3g087260 | 31.330 | 233 | 144 | 7 | 53 | 281 | 180 | 400 | 2.90e-13 | 70.5 |
MS.gene30045.t1 | MTR_1g108800 | 31.489 | 235 | 133 | 8 | 50 | 277 | 69 | 282 | 3.30e-13 | 70.1 |
MS.gene30045.t1 | MTR_2g007090 | 30.876 | 217 | 115 | 8 | 86 | 300 | 74 | 257 | 4.71e-13 | 68.9 |
MS.gene30045.t1 | MTR_3g023630 | 29.818 | 275 | 161 | 11 | 11 | 275 | 63 | 315 | 7.14e-13 | 69.3 |
MS.gene30045.t1 | MTR_7g114710 | 27.698 | 278 | 147 | 12 | 11 | 275 | 68 | 304 | 2.19e-12 | 67.8 |
MS.gene30045.t1 | MTR_5g039450 | 27.682 | 289 | 157 | 13 | 11 | 287 | 64 | 312 | 2.27e-12 | 67.4 |
MS.gene30045.t1 | MTR_7g007370 | 34.483 | 174 | 96 | 6 | 71 | 242 | 94 | 251 | 3.46e-12 | 67.0 |
MS.gene30045.t1 | MTR_5g013500 | 29.054 | 296 | 162 | 13 | 11 | 289 | 50 | 314 | 4.56e-12 | 66.6 |
MS.gene30045.t1 | MTR_3g105060 | 25.448 | 279 | 178 | 7 | 4 | 275 | 59 | 314 | 1.07e-11 | 65.5 |
MS.gene30045.t1 | MTR_5g045510 | 30.802 | 237 | 131 | 9 | 46 | 277 | 103 | 311 | 3.31e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 65 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAATTCTTGAGGACTTAT+TGG | 0.128488 | 7.1:+62734617 | MS.gene30045:CDS |
CCCTTCGTTTGAAACATATT+TGG | 0.157179 | 7.1:+62734553 | MS.gene30045:CDS |
CTCGTGGTTCTCAAGCTTTC+GGG | 0.160326 | 7.1:+62734480 | MS.gene30045:CDS |
CCGTCGTGGTTGGCAATTCT+TGG | 0.203311 | 7.1:+62735005 | MS.gene30045:CDS |
AACATGAAATCTCGATCTTT+TGG | 0.204094 | 7.1:-62734579 | None:intergenic |
CGAAGTCGTTAAAGCGAAAA+AGG | 0.212517 | 7.1:-62734260 | None:intergenic |
TCGTCTGATGTTTCTTCGTC+TGG | 0.218602 | 7.1:-62735214 | None:intergenic |
CCTCGTGGTTCTCAAGCTTT+CGG | 0.233020 | 7.1:+62734479 | MS.gene30045:CDS |
GAGATTTCATGTTAATTATA+AGG | 0.234912 | 7.1:+62734589 | MS.gene30045:CDS |
CTACTCAACATAAGCCTAAA+AGG | 0.260287 | 7.1:+62735310 | MS.gene30045:CDS |
GCCAATAAGTCCTCAAGAAT+TGG | 0.295840 | 7.1:-62734618 | None:intergenic |
CACAAGACGGAAAGTCTTAA+TGG | 0.305748 | 7.1:-62734319 | None:intergenic |
CCAATTGGAAACACTGTTAC+TGG | 0.310443 | 7.1:-62734367 | None:intergenic |
TGCTTGCTTCTTACTGTGAT+TGG | 0.314247 | 7.1:+62734974 | MS.gene30045:CDS |
AGATTTCATGTTAATTATAA+GGG | 0.317896 | 7.1:+62734590 | MS.gene30045:CDS |
CCTTCAGCTCCATGCGTATA+CGG | 0.337103 | 7.1:+62734422 | MS.gene30045:CDS |
CCAGTAACAGTGTTTCCAAT+TGG | 0.390722 | 7.1:+62734367 | MS.gene30045:CDS |
CAGCACAAGGTTGACCCAAT+TGG | 0.404373 | 7.1:-62734382 | None:intergenic |
TGTCGTTAAGAATCGGCTTC+AGG | 0.413597 | 7.1:+62736049 | MS.gene30045:CDS |
TCAAAAGTTTGACGTTGATC+AGG | 0.424661 | 7.1:+62735056 | MS.gene30045:CDS |
TAATGGGAAGTGCGGGATCT+CGG | 0.428894 | 7.1:-62734302 | None:intergenic |
CTTGGTAATTGATGACGAAC+AGG | 0.430400 | 7.1:+62734788 | MS.gene30045:CDS |
CAGTAACAGTGTTTCCAATT+GGG | 0.431458 | 7.1:+62734368 | MS.gene30045:CDS |
CGTCTGATGTTTCTTCGTCT+GGG | 0.433931 | 7.1:-62735213 | None:intergenic |
TTTATAATGTCGTTAAGAAT+CGG | 0.439906 | 7.1:+62736042 | MS.gene30045:CDS |
ACAAGACGGAAAGTCTTAAT+GGG | 0.444634 | 7.1:-62734318 | None:intergenic |
TCTGCAATTGAGAATATTGA+TGG | 0.446166 | 7.1:-62734454 | None:intergenic |
CCAATAAGTCCTCAAGAATT+GGG | 0.451282 | 7.1:-62734617 | None:intergenic |
TTCAGAGGTAAGAGATTGGT+TGG | 0.464597 | 7.1:-62734664 | None:intergenic |
AATGGGAAGTGCGGGATCTC+GGG | 0.465859 | 7.1:-62734301 | None:intergenic |
CCAAATATGTTTCAAACGAA+GGG | 0.471416 | 7.1:-62734553 | None:intergenic |
CAATTGGAAACACTGTTACT+GGG | 0.480998 | 7.1:-62734366 | None:intergenic |
TCCAAATATGTTTCAAACGA+AGG | 0.482448 | 7.1:-62734554 | None:intergenic |
ACTCTTCAGAGGTAAGAGAT+TGG | 0.485105 | 7.1:-62734668 | None:intergenic |
TATAAACAAGCATGGGATAG+AGG | 0.492886 | 7.1:-62736025 | None:intergenic |
ATAATCACTTGCAAGTATGC+AGG | 0.497310 | 7.1:+62737099 | MS.gene30045:CDS |
GGCATTCTCTCCGTCGTGGT+TGG | 0.497400 | 7.1:+62734995 | MS.gene30045:CDS |
ATATGTACGGTCTCTGCGCT+TGG | 0.527573 | 7.1:+62734770 | MS.gene30045:CDS |
GAGGTAAGAGATTGGTTGGA+AGG | 0.533290 | 7.1:-62734660 | None:intergenic |
AACGACATTATAAACAAGCA+TGG | 0.538128 | 7.1:-62736033 | None:intergenic |
AATTGGAAACACTGTTACTG+GGG | 0.548293 | 7.1:-62734365 | None:intergenic |
AAAGTCTTAATGGGAAGTGC+GGG | 0.563841 | 7.1:-62734309 | None:intergenic |
AAGGGGATGCCCAATTCTTG+AGG | 0.564365 | 7.1:+62734608 | MS.gene30045:CDS |
TGAAAGCAGTTCAATATGTA+CGG | 0.572292 | 7.1:+62734757 | MS.gene30045:CDS |
GATTAAAATGGTACACAAGA+CGG | 0.575494 | 7.1:-62734332 | None:intergenic |
CGAAGATTATTTGATAGTCA+CGG | 0.579664 | 7.1:+62735243 | MS.gene30045:CDS |
CAACTCCACGTTGCAGCACA+AGG | 0.583108 | 7.1:-62734395 | None:intergenic |
GATTTCATGTTAATTATAAG+GGG | 0.584396 | 7.1:+62734591 | MS.gene30045:CDS |
CCGTATACGCATGGAGCTGA+AGG | 0.590886 | 7.1:-62734422 | None:intergenic |
ATGTTCGAAGGTGTAATGAA+AGG | 0.597357 | 7.1:-62735282 | None:intergenic |
ACGACATTATAAACAAGCAT+GGG | 0.603153 | 7.1:-62736032 | None:intergenic |
CTGCAATTGAGAATATTGAT+GGG | 0.613718 | 7.1:-62734453 | None:intergenic |
GAAAGTCTTAATGGGAAGTG+CGG | 0.618903 | 7.1:-62734310 | None:intergenic |
GTAAAGACACCGTATACGCA+TGG | 0.638278 | 7.1:-62734431 | None:intergenic |
TGAGTAGATTGCATGTTCGA+AGG | 0.654459 | 7.1:-62735294 | None:intergenic |
TGGAAACACTGTTACTGGGG+GGG | 0.665337 | 7.1:-62734362 | None:intergenic |
CCAAGAATTGCCAACCACGA+CGG | 0.671329 | 7.1:-62735005 | None:intergenic |
ATTGGAAACACTGTTACTGG+GGG | 0.673016 | 7.1:-62734364 | None:intergenic |
TCTCAATTGCAGAACCCTCG+TGG | 0.673056 | 7.1:+62734464 | MS.gene30045:CDS |
GATTGGCATTCTCTCCGTCG+TGG | 0.674053 | 7.1:+62734991 | MS.gene30045:CDS |
TTGGAAACACTGTTACTGGG+GGG | 0.678544 | 7.1:-62734363 | None:intergenic |
GTCAACCTTGTGCTGCAACG+TGG | 0.686340 | 7.1:+62734390 | MS.gene30045:CDS |
CGAAAGCTTGAGAACCACGA+GGG | 0.721360 | 7.1:-62734478 | None:intergenic |
CCGAAAGCTTGAGAACCACG+AGG | 0.731959 | 7.1:-62734479 | None:intergenic |
AGGTGTAATGAAAGGCAATG+CGG | 0.741413 | 7.1:-62735274 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTACAAATAAGAAAA+AGG | - | chr7.1:62735603-62735622 | None:intergenic | 10.0% |
!! | AGATTTCATGTTAATTATAA+GGG | + | chr7.1:62734590-62734609 | MS.gene30045:CDS | 15.0% |
!! | TATTAACAATTAATGCTATA+TGG | - | chr7.1:62736762-62736781 | None:intergenic | 15.0% |
!! | AAATGTTACATATATTTGTC+AGG | - | chr7.1:62735654-62735673 | None:intergenic | 20.0% |
!! | ACCATAAACTATTAGAAATA+AGG | - | chr7.1:62734888-62734907 | None:intergenic | 20.0% |
!! | AGTTGGAATAAATTTCAATT+AGG | + | chr7.1:62736888-62736907 | MS.gene30045:intron | 20.0% |
!! | ATCAATAGTAAAAGGAAAAA+AGG | - | chr7.1:62736920-62736939 | None:intergenic | 20.0% |
!! | ATTAGTACTATGTTTATACA+TGG | + | chr7.1:62736679-62736698 | MS.gene30045:intron | 20.0% |
!! | GAGATTTCATGTTAATTATA+AGG | + | chr7.1:62734589-62734608 | MS.gene30045:CDS | 20.0% |
!! | GATTTCATGTTAATTATAAG+GGG | + | chr7.1:62734591-62734610 | MS.gene30045:CDS | 20.0% |
!! | TGCAAATGTATGATAAAATT+AGG | - | chr7.1:62735745-62735764 | None:intergenic | 20.0% |
!! | TGTGTCAAATTATGAAAAAT+AGG | - | chr7.1:62734949-62734968 | None:intergenic | 20.0% |
!! | TTAGTACTATGTTTATACAT+GGG | + | chr7.1:62736680-62736699 | MS.gene30045:intron | 20.0% |
!! | TTCTATGATTGAAATCATAA+CGG | + | chr7.1:62736844-62736863 | MS.gene30045:intron | 20.0% |
!! | TTTATAATGTCGTTAAGAAT+CGG | + | chr7.1:62736042-62736061 | MS.gene30045:CDS | 20.0% |
!!! | AAACAAATTCTAGTTTTTGT+TGG | - | chr7.1:62735704-62735723 | None:intergenic | 20.0% |
!!! | ACCTTATTTCTAATAGTTTA+TGG | + | chr7.1:62734884-62734903 | MS.gene30045:intron | 20.0% |
!!! | AGAATGCTAAATATTTGTTT+TGG | + | chr7.1:62736298-62736317 | MS.gene30045:intron | 20.0% |
!!! | AGCACAAAATTTTATTTCAA+AGG | - | chr7.1:62736506-62736525 | None:intergenic | 20.0% |
!!! | GATAATAGACTTTTTATTTC+AGG | - | chr7.1:62735412-62735431 | None:intergenic | 20.0% |
!!! | TTTCTGAAATCAATAGTAAA+AGG | - | chr7.1:62736928-62736947 | None:intergenic | 20.0% |
! | AACAATTAATGCTATATGGA+TGG | - | chr7.1:62736758-62736777 | None:intergenic | 25.0% |
! | ACAATTAATGCTATATGGAT+GGG | - | chr7.1:62736757-62736776 | None:intergenic | 25.0% |
! | AGTTTGGAGAGAAAATAAAA+TGG | - | chr7.1:62736425-62736444 | None:intergenic | 25.0% |
! | ATAAAAAAGCAATAAGATCG+TGG | + | chr7.1:62736328-62736347 | MS.gene30045:intron | 25.0% |
! | ATGTATGATAAAATTAGGAG+TGG | - | chr7.1:62735740-62735759 | None:intergenic | 25.0% |
! | GAATTTCAAATTCAAGCAAA+AGG | + | chr7.1:62736547-62736566 | MS.gene30045:intron | 25.0% |
! | GTTTGGAGAGAAAATAAAAT+GGG | - | chr7.1:62736424-62736443 | None:intergenic | 25.0% |
! | TGATATAGAAAAGAACAAGT+TGG | + | chr7.1:62736871-62736890 | MS.gene30045:intron | 25.0% |
! | TTAACTTCTACTATGCAATT+TGG | + | chr7.1:62735512-62735531 | MS.gene30045:intron | 25.0% |
! | TTTCATATAGTTTGACATGT+TGG | + | chr7.1:62736995-62737014 | MS.gene30045:intron | 25.0% |
!!! | ACTATTGATTTCAGAAAACA+GGG | + | chr7.1:62736931-62736950 | MS.gene30045:intron | 25.0% |
!!! | ATATTTTTGATTGTTAGAGC+AGG | + | chr7.1:62735990-62736009 | MS.gene30045:intron | 25.0% |
!!! | TACTATTGATTTCAGAAAAC+AGG | + | chr7.1:62736930-62736949 | MS.gene30045:intron | 25.0% |
AAAACATAAGGTTCTTCATG+AGG | - | chr7.1:62736380-62736399 | None:intergenic | 30.0% | |
AACGACATTATAAACAAGCA+TGG | - | chr7.1:62736036-62736055 | None:intergenic | 30.0% | |
AAGTTAAGTAAACTAGAGGA+AGG | - | chr7.1:62735499-62735518 | None:intergenic | 30.0% | |
ACATATATTTGTCAGGTACA+AGG | - | chr7.1:62735647-62735666 | None:intergenic | 30.0% | |
ACGACATTATAAACAAGCAT+GGG | - | chr7.1:62736035-62736054 | None:intergenic | 30.0% | |
AGAAAAAGGAAAGCAATTAC+TGG | - | chr7.1:62735589-62735608 | None:intergenic | 30.0% | |
ATATAGTTTGACATGTTGGA+AGG | + | chr7.1:62736999-62737018 | MS.gene30045:intron | 30.0% | |
CAGTTTCATACTGTATTACT+CGG | + | chr7.1:62737046-62737065 | MS.gene30045:intron | 30.0% | |
CATATATTTGTCAGGTACAA+GGG | - | chr7.1:62735646-62735665 | None:intergenic | 30.0% | |
CATTTAACACAATGGTGTTT+AGG | - | chr7.1:62736461-62736480 | None:intergenic | 30.0% | |
CCAAATATGTTTCAAACGAA+GGG | - | chr7.1:62734556-62734575 | None:intergenic | 30.0% | |
CTAAACACCATTGTGTTAAA+TGG | + | chr7.1:62736459-62736478 | MS.gene30045:intron | 30.0% | |
CTGCAATTGAGAATATTGAT+GGG | - | chr7.1:62734456-62734475 | None:intergenic | 30.0% | |
GATAAAATTAGGAGTGGAAA+AGG | - | chr7.1:62735734-62735753 | None:intergenic | 30.0% | |
GATTAAAATGGTACACAAGA+CGG | - | chr7.1:62734335-62734354 | None:intergenic | 30.0% | |
GTAGAAGTTAAGTAAACTAG+AGG | - | chr7.1:62735503-62735522 | None:intergenic | 30.0% | |
TATAGTTTGACATGTTGGAA+GGG | + | chr7.1:62737000-62737019 | MS.gene30045:intron | 30.0% | |
TCCAAATATGTTTCAAACGA+AGG | - | chr7.1:62734557-62734576 | None:intergenic | 30.0% | |
TCTGCAATTGAGAATATTGA+TGG | - | chr7.1:62734457-62734476 | None:intergenic | 30.0% | |
TCTTCTTGGATTATAAAGAC+AGG | - | chr7.1:62736798-62736817 | None:intergenic | 30.0% | |
TGAAAGCAGTTCAATATGTA+CGG | + | chr7.1:62734757-62734776 | MS.gene30045:CDS | 30.0% | |
! | AACATGAAATCTCGATCTTT+TGG | - | chr7.1:62734582-62734601 | None:intergenic | 30.0% |
! | ACATGAAATCTCGATCTTTT+GGG | - | chr7.1:62734581-62734600 | None:intergenic | 30.0% |
! | AGGAGTTTTCAACAATAGTT+TGG | - | chr7.1:62736441-62736460 | None:intergenic | 30.0% |
! | CAAGTACTACAAAGTTTTAC+CGG | + | chr7.1:62736197-62736216 | MS.gene30045:intron | 30.0% |
! | CATAGTAATGCTTTATTCAC+CGG | - | chr7.1:62736219-62736238 | None:intergenic | 30.0% |
! | CGAAGATTATTTGATAGTCA+CGG | + | chr7.1:62735243-62735262 | MS.gene30045:CDS | 30.0% |
! | GGTGAATAAAGCATTACTAT+GGG | + | chr7.1:62736218-62736237 | MS.gene30045:intron | 30.0% |
! | TCATGAAGAACCTTATGTTT+TGG | + | chr7.1:62736379-62736398 | MS.gene30045:intron | 30.0% |
! | TTTATGGTTCTGCATATTCT+AGG | + | chr7.1:62734900-62734919 | MS.gene30045:intron | 30.0% |
!! | GAACTTTGAGATCATTAACT+TGG | + | chr7.1:62735547-62735566 | MS.gene30045:intron | 30.0% |
!! | GACAATAGTTTGTTAGTAAG+AGG | + | chr7.1:62735967-62735986 | MS.gene30045:intron | 30.0% |
AAGCATTACTATGGGACTTT+AGG | + | chr7.1:62736226-62736245 | MS.gene30045:intron | 35.0% | |
AATGAGAAAGAAGTTGAGAG+CGG | - | chr7.1:62735785-62735804 | None:intergenic | 35.0% | |
AATTGGAAACACTGTTACTG+GGG | - | chr7.1:62734368-62734387 | None:intergenic | 35.0% | |
ACAAGACGGAAAGTCTTAAT+GGG | - | chr7.1:62734321-62734340 | None:intergenic | 35.0% | |
AGATACTATCTTCTTCCGTT+TGG | - | chr7.1:62735847-62735866 | None:intergenic | 35.0% | |
ATAATCACTTGCAAGTATGC+AGG | + | chr7.1:62737099-62737118 | MS.gene30045:CDS | 35.0% | |
ATCATAGAACTCATCAACTC+AGG | - | chr7.1:62736833-62736852 | None:intergenic | 35.0% | |
CAATTGGAAACACTGTTACT+GGG | - | chr7.1:62734369-62734388 | None:intergenic | 35.0% | |
CAGTAACAGTGTTTCCAATT+GGG | + | chr7.1:62734368-62734387 | MS.gene30045:CDS | 35.0% | |
CATAGACCATCCAAAACATA+AGG | - | chr7.1:62736392-62736411 | None:intergenic | 35.0% | |
CCAATAAGTCCTCAAGAATT+GGG | - | chr7.1:62734620-62734639 | None:intergenic | 35.0% | |
CGAGTAATACAGTATGAAAC+TGG | - | chr7.1:62737048-62737067 | None:intergenic | 35.0% | |
CTACTCAACATAAGCCTAAA+AGG | + | chr7.1:62735310-62735329 | MS.gene30045:CDS | 35.0% | |
GAAGTCGTTAAAGCGAAAAA+GGG | - | chr7.1:62734262-62734281 | None:intergenic | 35.0% | |
GATGAAGTATGGGTTCATAT+TGG | + | chr7.1:62736098-62736117 | MS.gene30045:intron | 35.0% | |
GGAAAAATGCATGATCTTCT+TGG | - | chr7.1:62736812-62736831 | None:intergenic | 35.0% | |
GGACAAACCATTTAACACAA+TGG | - | chr7.1:62736469-62736488 | None:intergenic | 35.0% | |
TATAAACAAGCATGGGATAG+AGG | - | chr7.1:62736028-62736047 | None:intergenic | 35.0% | |
TCAAAAGTTTGACGTTGATC+AGG | + | chr7.1:62735056-62735075 | MS.gene30045:CDS | 35.0% | |
! | ATGTTCGAAGGTGTAATGAA+AGG | - | chr7.1:62735285-62735304 | None:intergenic | 35.0% |
! | ATTCTGAAGGGAAACTTGTT+AGG | + | chr7.1:62735944-62735963 | MS.gene30045:intron | 35.0% |
! | CCCTTCGTTTGAAACATATT+TGG | + | chr7.1:62734553-62734572 | MS.gene30045:CDS | 35.0% |
! | CGGTGAATAAAGCATTACTA+TGG | + | chr7.1:62736217-62736236 | MS.gene30045:intron | 35.0% |
!! | GAAGAACCTTATGTTTTGGA+TGG | + | chr7.1:62736383-62736402 | MS.gene30045:intron | 35.0% |
!! | GATGACATGCTTACTTTTCA+CGG | + | chr7.1:62736962-62736981 | MS.gene30045:intron | 35.0% |
!! | TCAAAGGATTCTAAGATACG+AGG | - | chr7.1:62736490-62736509 | None:intergenic | 35.0% |
!! | TTCTGAAGGGAAACTTGTTA+GGG | + | chr7.1:62735945-62735964 | MS.gene30045:intron | 35.0% |
!! | TTTCTAGTTTGACCAATGCA+TGG | - | chr7.1:62735871-62735890 | None:intergenic | 35.0% |
!!! | AAACGAAGGGTTTTAAGAGA+AGG | - | chr7.1:62734543-62734562 | None:intergenic | 35.0% |
!!! | ACGTCAAACTTTTGAAGCTT+AGG | - | chr7.1:62735051-62735070 | None:intergenic | 35.0% |
!!! | ACTTTTGAAGCTTAGGACAA+TGG | - | chr7.1:62735044-62735063 | None:intergenic | 35.0% |
!!! | TTTTGTTGGTGATACAATGC+TGG | - | chr7.1:62735690-62735709 | None:intergenic | 35.0% |
AAGTGCAACTTGCACAAACT+AGG | - | chr7.1:62736727-62736746 | None:intergenic | 40.0% | |
ACTCTTCAGAGGTAAGAGAT+TGG | - | chr7.1:62734671-62734690 | None:intergenic | 40.0% | |
AGATAGTATCTGCCATGCAT+TGG | + | chr7.1:62735856-62735875 | MS.gene30045:intron | 40.0% | |
AGCAATAAGATCGTGGAGAA+AGG | + | chr7.1:62736335-62736354 | MS.gene30045:intron | 40.0% | |
AGGTGTAATGAAAGGCAATG+CGG | - | chr7.1:62735277-62735296 | None:intergenic | 40.0% | |
ATTGGAAACACTGTTACTGG+GGG | - | chr7.1:62734367-62734386 | None:intergenic | 40.0% | |
CACAAGACGGAAAGTCTTAA+TGG | - | chr7.1:62734322-62734341 | None:intergenic | 40.0% | |
CCAATTGGAAACACTGTTAC+TGG | - | chr7.1:62734370-62734389 | None:intergenic | 40.0% | |
CCAGTAACAGTGTTTCCAAT+TGG | + | chr7.1:62734367-62734386 | MS.gene30045:CDS | 40.0% | |
CCCAATTCTTGAGGACTTAT+TGG | + | chr7.1:62734617-62734636 | MS.gene30045:CDS | 40.0% | |
CGAAGTCGTTAAAGCGAAAA+AGG | - | chr7.1:62734263-62734282 | None:intergenic | 40.0% | |
CTCATTTATACCCCTTCAGA+AGG | - | chr7.1:62736596-62736615 | None:intergenic | 40.0% | |
GAAAGTCTTAATGGGAAGTG+CGG | - | chr7.1:62734313-62734332 | None:intergenic | 40.0% | |
GCCAATAAGTCCTCAAGAAT+TGG | - | chr7.1:62734621-62734640 | None:intergenic | 40.0% | |
GGCTTAGACATCATTCTGAA+GGG | + | chr7.1:62735932-62735951 | MS.gene30045:intron | 40.0% | |
TCAGGTACAAGGGATTAACA+TGG | - | chr7.1:62735636-62735655 | None:intergenic | 40.0% | |
TCTATTATCCTCATGCCCAA+GGG | + | chr7.1:62735423-62735442 | MS.gene30045:intron | 40.0% | |
TGAGTAGATTGCATGTTCGA+AGG | - | chr7.1:62735297-62735316 | None:intergenic | 40.0% | |
TGCTTGCTTCTTACTGTGAT+TGG | + | chr7.1:62734974-62734993 | MS.gene30045:CDS | 40.0% | |
TTCAGAGGTAAGAGATTGGT+TGG | - | chr7.1:62734667-62734686 | None:intergenic | 40.0% | |
TTCATACTGTATTACTCGGC+AGG | + | chr7.1:62737050-62737069 | MS.gene30045:intron | 40.0% | |
TTGGTGGAAGGCTAAACTTT+GGG | + | chr7.1:62736616-62736635 | MS.gene30045:intron | 40.0% | |
! | AAAGCTTTTCGACTCTTCAG+AGG | - | chr7.1:62734682-62734701 | None:intergenic | 40.0% |
! | AAAGTCTTAATGGGAAGTGC+GGG | - | chr7.1:62734312-62734331 | None:intergenic | 40.0% |
! | AAGGGGTATAAATGAGTTGG+TGG | + | chr7.1:62736600-62736619 | MS.gene30045:intron | 40.0% |
! | CTAGCGTAAGCTTACCTTTT+AGG | - | chr7.1:62735327-62735346 | None:intergenic | 40.0% |
! | CTGAAGGGGTATAAATGAGT+TGG | + | chr7.1:62736597-62736616 | MS.gene30045:intron | 40.0% |
!! | CTAAGCCCATTAGCTTGTTT+GGG | - | chr7.1:62735919-62735938 | None:intergenic | 40.0% |
!! | CTTGGTAATTGATGACGAAC+AGG | + | chr7.1:62734788-62734807 | MS.gene30045:CDS | 40.0% |
!! | GGTATAAATGAGTTGGTGGA+AGG | + | chr7.1:62736604-62736623 | MS.gene30045:intron | 40.0% |
!! | TCTAAGCCCATTAGCTTGTT+TGG | - | chr7.1:62735920-62735939 | None:intergenic | 40.0% |
!!! | TCGGGTTTTATTGTGCAAGT+GGG | + | chr7.1:62734498-62734517 | MS.gene30045:CDS | 40.0% |
!!! | TTCGGGTTTTATTGTGCAAG+TGG | + | chr7.1:62734497-62734516 | MS.gene30045:CDS | 40.0% |
AAACTGGTAGCAAACACCAC+TGG | - | chr7.1:62737032-62737051 | None:intergenic | 45.0% | |
AAGGTAAGCTTACGCTAGCA+AGG | + | chr7.1:62735329-62735348 | MS.gene30045:intron | 45.0% | |
ACCATGACAATCTCGAACAG+AGG | + | chr7.1:62735382-62735401 | MS.gene30045:intron | 45.0% | |
ATCTCGCCCAAACAAGCTAA+TGG | + | chr7.1:62735910-62735929 | MS.gene30045:intron | 45.0% | |
ATCTTCTTCCGTTTGGCAGA+AGG | - | chr7.1:62735840-62735859 | None:intergenic | 45.0% | |
CGTCTGATGTTTCTTCGTCT+GGG | - | chr7.1:62735216-62735235 | None:intergenic | 45.0% | |
GGGCTTAGACATCATTCTGA+AGG | + | chr7.1:62735931-62735950 | MS.gene30045:intron | 45.0% | |
GGGGGTGAGGTAGATTAAAA+TGG | - | chr7.1:62734347-62734366 | None:intergenic | 45.0% | |
GTAAAGACACCGTATACGCA+TGG | - | chr7.1:62734434-62734453 | None:intergenic | 45.0% | |
GTCTATTATCCTCATGCCCA+AGG | + | chr7.1:62735422-62735441 | MS.gene30045:intron | 45.0% | |
TCAAGCAAAAGGCAAAGCCA+TGG | + | chr7.1:62736558-62736577 | MS.gene30045:intron | 45.0% | |
TCCTCTGTTCGAGATTGTCA+TGG | - | chr7.1:62735386-62735405 | None:intergenic | 45.0% | |
TCGTCTGATGTTTCTTCGTC+TGG | - | chr7.1:62735217-62735236 | None:intergenic | 45.0% | |
TCTCGCCCAAACAAGCTAAT+GGG | + | chr7.1:62735911-62735930 | MS.gene30045:intron | 45.0% | |
TCTTCTTCCGTTTGGCAGAA+GGG | - | chr7.1:62735839-62735858 | None:intergenic | 45.0% | |
TTGGAAACACTGTTACTGGG+GGG | - | chr7.1:62734366-62734385 | None:intergenic | 45.0% | |
! | GAGGTAAGAGATTGGTTGGA+AGG | - | chr7.1:62734663-62734682 | None:intergenic | 45.0% |
! | GTTGGTGGAAGGCTAAACTT+TGG | + | chr7.1:62736615-62736634 | MS.gene30045:intron | 45.0% |
! | TGTCGTTAAGAATCGGCTTC+AGG | + | chr7.1:62736049-62736068 | MS.gene30045:CDS | 45.0% |
! | TTCTTCATGAGGAGAAGCGT+AGG | - | chr7.1:62736369-62736388 | None:intergenic | 45.0% |
!! | GGACAGGGTTGATGAAGTAT+GGG | + | chr7.1:62736088-62736107 | MS.gene30045:intron | 45.0% |
!!! | CGGGTTTTATTGTGCAAGTG+GGG | + | chr7.1:62734499-62734518 | MS.gene30045:CDS | 45.0% |
!!! | TCAGGCTGAGTTTTGTTGGT+GGG | + | chr7.1:62736067-62736086 | MS.gene30045:CDS | 45.0% |
!!! | TGAGTTTTGTTGGTGGGACA+GGG | + | chr7.1:62736073-62736092 | MS.gene30045:CDS | 45.0% |
!!! | TTCAGGCTGAGTTTTGTTGG+TGG | + | chr7.1:62736066-62736085 | MS.gene30045:CDS | 45.0% |
AAGGGGATGCCCAATTCTTG+AGG | + | chr7.1:62734608-62734627 | MS.gene30045:CDS | 50.0% | |
ATATGTACGGTCTCTGCGCT+TGG | + | chr7.1:62734770-62734789 | MS.gene30045:CDS | 50.0% | |
CAGCACAAGGTTGACCCAAT+TGG | - | chr7.1:62734385-62734404 | None:intergenic | 50.0% | |
CCAAGAATTGCCAACCACGA+CGG | - | chr7.1:62735008-62735027 | None:intergenic | 50.0% | |
CCTCGTGGTTCTCAAGCTTT+CGG | + | chr7.1:62734479-62734498 | MS.gene30045:CDS | 50.0% | |
CCTTCAGCTCCATGCGTATA+CGG | + | chr7.1:62734422-62734441 | MS.gene30045:CDS | 50.0% | |
CGAAAGCTTGAGAACCACGA+GGG | - | chr7.1:62734481-62734500 | None:intergenic | 50.0% | |
CGTAAGTTTACACGCTGCAG+AGG | - | chr7.1:62735449-62735468 | None:intergenic | 50.0% | |
CTCGTGGTTCTCAAGCTTTC+GGG | + | chr7.1:62734480-62734499 | MS.gene30045:CDS | 50.0% | |
CTTCTTCCGTTTGGCAGAAG+GGG | - | chr7.1:62735838-62735857 | None:intergenic | 50.0% | |
GAAAGAAGTTGAGAGCGGAG+TGG | - | chr7.1:62735780-62735799 | None:intergenic | 50.0% | |
GCGTGGTGATACCTTCTGAA+GGG | + | chr7.1:62736582-62736601 | MS.gene30045:intron | 50.0% | |
TCTCAATTGCAGAACCCTCG+TGG | + | chr7.1:62734464-62734483 | MS.gene30045:CDS | 50.0% | |
TGGAAACACTGTTACTGGGG+GGG | - | chr7.1:62734365-62734384 | None:intergenic | 50.0% | |
TGGGCGAGATGAATTGACGT+AGG | - | chr7.1:62735900-62735919 | None:intergenic | 50.0% | |
! | CGTGGTGATACCTTCTGAAG+GGG | + | chr7.1:62736583-62736602 | MS.gene30045:intron | 50.0% |
! | GTTGGAAGGGTATGTTCCAG+TGG | + | chr7.1:62737013-62737032 | MS.gene30045:intron | 50.0% |
! | TAATGGGAAGTGCGGGATCT+CGG | - | chr7.1:62734305-62734324 | None:intergenic | 50.0% |
!! | GGCTTCAGGCTGAGTTTTGT+TGG | + | chr7.1:62736063-62736082 | MS.gene30045:CDS | 50.0% |
!! | GGGACAGGGTTGATGAAGTA+TGG | + | chr7.1:62736087-62736106 | MS.gene30045:intron | 50.0% |
!!! | CTGAGTTTTGTTGGTGGGAC+AGG | + | chr7.1:62736072-62736091 | MS.gene30045:CDS | 50.0% |
CAACTCCACGTTGCAGCACA+AGG | - | chr7.1:62734398-62734417 | None:intergenic | 55.0% | |
CCGAAAGCTTGAGAACCACG+AGG | - | chr7.1:62734482-62734501 | None:intergenic | 55.0% | |
CCGTATACGCATGGAGCTGA+AGG | - | chr7.1:62734425-62734444 | None:intergenic | 55.0% | |
CCGTCGTGGTTGGCAATTCT+TGG | + | chr7.1:62735005-62735024 | MS.gene30045:CDS | 55.0% | |
CGCGTGGTGATACCTTCTGA+AGG | + | chr7.1:62736581-62736600 | MS.gene30045:intron | 55.0% | |
GATTGGCATTCTCTCCGTCG+TGG | + | chr7.1:62734991-62735010 | MS.gene30045:CDS | 55.0% | |
GTCAACCTTGTGCTGCAACG+TGG | + | chr7.1:62734390-62734409 | MS.gene30045:CDS | 55.0% | |
TGCACTCCCCTTCTGCCAAA+CGG | + | chr7.1:62735829-62735848 | MS.gene30045:intron | 55.0% | |
! | AATGGGAAGTGCGGGATCTC+GGG | - | chr7.1:62734304-62734323 | None:intergenic | 55.0% |
! | TTTGGCAGAAGGGGAGTGCA+TGG | - | chr7.1:62735829-62735848 | None:intergenic | 55.0% |
AAAGGCAAAGCCATGGCGCG+TGG | + | chr7.1:62736565-62736584 | MS.gene30045:intron | 60.0% | |
ACACTGTTACTGGGGGGGTG+AGG | - | chr7.1:62734360-62734379 | None:intergenic | 60.0% | |
GGCATTCTCTCCGTCGTGGT+TGG | + | chr7.1:62734995-62735014 | MS.gene30045:CDS | 60.0% | |
TACACGCTGCAGAGGCCCTT+GGG | - | chr7.1:62735441-62735460 | None:intergenic | 60.0% | |
TTACACGCTGCAGAGGCCCT+TGG | - | chr7.1:62735442-62735461 | None:intergenic | 60.0% | |
!! | GAAGGTATCACCACGCGCCA+TGG | - | chr7.1:62736578-62736597 | None:intergenic | 60.0% |
TGCAGAGGCCCTTGGGCATG+AGG | - | chr7.1:62735434-62735453 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 62734240 | 62737131 | 62734240 | ID=MS.gene30045 |
chr7.1 | mRNA | 62734240 | 62737131 | 62734240 | ID=MS.gene30045.t1;Parent=MS.gene30045 |
chr7.1 | exon | 62734240 | 62734809 | 62734240 | ID=MS.gene30045.t1.exon1;Parent=MS.gene30045.t1 |
chr7.1 | CDS | 62734240 | 62734809 | 62734240 | ID=cds.MS.gene30045.t1;Parent=MS.gene30045.t1 |
chr7.1 | exon | 62734922 | 62735077 | 62734922 | ID=MS.gene30045.t1.exon2;Parent=MS.gene30045.t1 |
chr7.1 | CDS | 62734922 | 62735077 | 62734922 | ID=cds.MS.gene30045.t1;Parent=MS.gene30045.t1 |
chr7.1 | exon | 62735208 | 62735331 | 62735208 | ID=MS.gene30045.t1.exon3;Parent=MS.gene30045.t1 |
chr7.1 | CDS | 62735208 | 62735331 | 62735208 | ID=cds.MS.gene30045.t1;Parent=MS.gene30045.t1 |
chr7.1 | exon | 62736012 | 62736103 | 62736012 | ID=MS.gene30045.t1.exon4;Parent=MS.gene30045.t1 |
chr7.1 | CDS | 62736012 | 62736103 | 62736012 | ID=cds.MS.gene30045.t1;Parent=MS.gene30045.t1 |
chr7.1 | exon | 62737072 | 62737131 | 62737072 | ID=MS.gene30045.t1.exon5;Parent=MS.gene30045.t1 |
chr7.1 | CDS | 62737072 | 62737131 | 62737072 | ID=cds.MS.gene30045.t1;Parent=MS.gene30045.t1 |
Gene Sequence |
Protein sequence |