AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99983


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99983.t1 MTR_8g062270 89.367 442 22 1 13 429 13 454 0.0 793
MS.gene99983.t1 MTR_8g468760 62.749 451 105 8 8 428 1 418 0.0 513
MS.gene99983.t1 MTR_5g092960 57.759 464 153 9 1 428 5 461 2.92e-165 473
MS.gene99983.t1 MTR_8g468840 58.371 442 147 8 16 427 14 448 1.31e-160 460
MS.gene99983.t1 MTR_8g467800 52.620 458 172 9 2 428 9 452 1.19e-141 412
MS.gene99983.t1 MTR_4g032730 49.160 476 184 12 1 428 1 466 2.34e-133 392
MS.gene99983.t1 MTR_2g083840 49.554 448 179 8 16 428 21 456 3.64e-127 375
MS.gene99983.t1 MTR_5g092960 57.724 369 118 7 1 335 5 369 3.94e-125 368
MS.gene99983.t1 MTR_8g468810 47.009 468 191 13 2 428 11 462 1.05e-124 369
MS.gene99983.t1 MTR_8g058970 48.017 479 176 14 9 428 12 476 5.62e-119 355
MS.gene99983.t1 MTR_8g468810 48.626 364 146 9 2 332 11 366 1.48e-97 297
MS.gene99983.t1 MTR_8g058965 42.283 473 210 14 1 428 1 455 9.25e-89 277
MS.gene99983.t1 MTR_8g445780 43.812 404 172 10 1 375 1 378 1.68e-86 269
MS.gene99983.t1 MTR_8g468810 50.000 304 119 6 2 279 11 307 4.37e-84 260
MS.gene99983.t1 MTR_8g468810 50.000 304 119 6 2 279 11 307 8.73e-84 260
MS.gene99983.t1 MTR_8g468810 50.000 304 119 6 2 279 11 307 1.06e-83 261
MS.gene99983.t1 MTR_8g014260 39.872 469 222 16 1 428 1 450 1.52e-83 263
MS.gene99983.t1 MTR_8g062010 39.159 452 221 14 8 428 1 429 4.59e-78 249
MS.gene99983.t1 MTR_8g070950 40.045 447 206 14 16 428 15 433 1.27e-77 248
MS.gene99983.t1 MTR_8g467800 49.524 315 116 8 2 287 9 309 1.08e-76 242
MS.gene99983.t1 MTR_8g469020 37.609 460 224 11 16 428 7 450 1.36e-76 246
MS.gene99983.t1 MTR_8g062310 39.468 451 189 18 15 428 24 427 2.51e-74 239
MS.gene99983.t1 MTR_4g050250 41.346 416 190 11 3 375 11 415 1.20e-72 234
MS.gene99983.t1 MTR_8g062080 37.634 465 221 16 3 428 10 444 6.44e-72 233
MS.gene99983.t1 MTR_8g062300 35.944 498 214 20 2 428 13 476 6.51e-66 218
MS.gene99983.t1 MTR_8g014210 47.083 240 112 7 194 428 1 230 5.13e-55 182
MS.gene99983.t1 MTR_8g077460 32.009 453 192 16 10 428 4 374 4.57e-48 169
MS.gene99983.t1 MTR_4g024710 39.777 269 146 7 166 428 88 346 1.03e-47 167
MS.gene99983.t1 MTR_8g467790 34.961 389 174 13 15 372 147 487 2.32e-47 170
MS.gene99983.t1 MTR_8g014160 38.614 303 150 10 16 287 41 338 4.23e-45 162
MS.gene99983.t1 MTR_4g024745 38.790 281 157 7 135 410 10 280 7.72e-40 144
MS.gene99983.t1 MTR_5g084070 31.011 445 242 19 10 421 7 419 1.46e-35 136
MS.gene99983.t1 MTR_5g080710 30.856 444 241 18 15 421 32 446 7.08e-35 135
MS.gene99983.t1 MTR_5g021550 48.148 162 65 6 2 158 13 160 7.76e-33 122
MS.gene99983.t1 MTR_2g086020 31.078 399 179 15 41 428 1 314 1.41e-30 120
MS.gene99983.t1 MTR_8g014290 46.309 149 73 5 16 158 10 157 2.02e-29 112
MS.gene99983.t1 MTR_1g041245 27.460 437 233 20 15 428 10 385 2.65e-26 109
MS.gene99983.t1 MTR_4g024720 40.116 172 72 6 9 158 12 174 9.06e-24 99.0
MS.gene99983.t1 MTR_4g080787 28.829 444 257 18 16 416 19 446 1.84e-22 99.8
MS.gene99983.t1 MTR_1089s0010 26.773 437 242 19 10 428 2 378 1.91e-21 95.9
MS.gene99983.t1 MTR_6g040270 27.358 424 238 19 18 426 10 378 2.04e-21 95.5
MS.gene99983.t1 MTR_4g056070 28.409 440 230 18 16 383 9 435 6.00e-19 89.0
MS.gene99983.t1 MTR_4g056020 28.230 418 235 17 16 391 9 403 7.01e-18 85.9
MS.gene99983.t1 MTR_4g055990 25.934 455 256 16 16 399 9 453 1.05e-17 85.5
MS.gene99983.t1 MTR_2g036470 26.244 442 264 19 3 429 2 396 1.37e-17 84.7
MS.gene99983.t1 MTR_4g055990 25.934 455 256 16 16 399 9 453 1.54e-17 85.1
MS.gene99983.t1 MTR_4g056040 28.733 442 232 20 16 391 9 433 1.93e-17 84.7
MS.gene99983.t1 MTR_5g039950 28.155 412 238 16 4 397 14 385 2.45e-17 84.0
MS.gene99983.t1 MTR_3g036250 24.057 424 244 15 16 426 5 363 4.51e-17 82.8
MS.gene99983.t1 MTR_2g007450 23.789 475 255 17 1 426 1 417 1.03e-16 82.0
MS.gene99983.t1 MTR_3g107120 27.315 432 241 20 16 426 9 388 1.53e-16 81.3
MS.gene99983.t1 MTR_8g085430 27.652 264 131 7 12 243 7 242 1.79e-16 80.5
MS.gene99983.t1 MTR_7g033915 25.057 435 229 19 14 429 9 365 8.29e-16 79.0
MS.gene99983.t1 MTR_7g032380 30.457 197 98 5 15 186 10 192 2.13e-15 77.4
MS.gene99983.t1 MTR_3g048290 28.538 431 232 19 12 391 19 424 2.25e-15 78.2
MS.gene99983.t1 MTR_2g008310 24.283 453 217 17 15 426 1 368 1.63e-14 75.1
MS.gene99983.t1 MTR_1g108820 24.945 453 233 21 10 426 2 383 1.64e-14 75.1
MS.gene99983.t1 MTR_4g056030 28.469 418 234 19 16 391 9 403 1.84e-14 75.5
MS.gene99983.t1 MTR_5g058100 24.766 428 256 17 15 428 8 383 1.93e-14 75.1
MS.gene99983.t1 MTR_3g108150 25.785 446 228 19 16 429 13 387 7.67e-14 73.2
MS.gene99983.t1 MTR_7g034115 26.699 412 205 17 15 399 10 351 1.62e-13 72.0
MS.gene99983.t1 MTR_6g011460 26.039 457 225 20 11 428 38 420 2.05e-13 72.0
MS.gene99983.t1 MTR_7g007080 25.170 441 232 18 16 426 4 376 2.33e-13 71.6
MS.gene99983.t1 MTR_2g047858 31.048 248 131 12 16 244 115 341 3.07e-13 72.0
MS.gene99983.t1 MTR_3g107100 29.353 201 104 7 11 186 6 193 3.46e-13 71.2
MS.gene99983.t1 MTR_7g056430 26.065 399 205 18 16 399 9 332 6.14e-13 71.6
MS.gene99983.t1 MTR_7g056420 26.065 399 205 18 16 399 9 332 6.39e-13 71.2
MS.gene99983.t1 MTR_7g115270 23.333 450 244 18 16 426 12 399 8.99e-13 70.1
MS.gene99983.t1 MTR_3g087260 25.210 476 264 19 16 429 12 457 1.22e-12 69.7
MS.gene99983.t1 MTR_2g091145 24.619 459 259 18 15 428 20 436 1.25e-12 69.7
MS.gene99983.t1 MTR_1g085120 24.619 459 236 19 7 428 160 545 2.20e-12 69.3
MS.gene99983.t1 MTR_2g005990 27.404 208 108 6 14 187 4 202 2.21e-12 68.6
MS.gene99983.t1 MTR_1g085120 24.619 459 236 19 7 428 85 470 3.26e-12 68.6
MS.gene99983.t1 MTR_0049s0110 26.644 289 154 11 14 280 6 258 5.48e-12 66.2
MS.gene99983.t1 MTR_2g047872 27.615 239 121 9 16 232 23 231 8.19e-12 67.0
MS.gene99983.t1 MTR_0049s0110 26.644 289 154 11 14 280 6 258 1.38e-11 65.9
MS.gene99983.t1 MTR_0049s0110 26.644 289 154 11 14 280 6 258 1.54e-11 65.9
MS.gene99983.t1 MTR_7g056447 28.177 181 111 5 8 187 1 163 1.79e-11 65.1
MS.gene99983.t1 MTR_0049s0110 26.644 289 154 11 14 280 6 258 2.00e-11 65.9
MS.gene99983.t1 MTR_1g115245 28.814 177 112 6 10 183 20 185 2.52e-11 64.7
MS.gene99983.t1 MTR_4g024770 44.118 68 30 1 1 60 1 68 2.71e-11 59.7
MS.gene99983.t1 MTR_7g075820 27.700 213 103 6 16 186 6 209 3.04e-11 65.1
MS.gene99983.t1 MTR_7g023330 25.616 406 247 19 2 397 4 364 4.07e-11 64.7
MS.gene99983.t1 MTR_4g113810 31.544 149 75 4 118 239 18 166 8.20e-11 60.8
MS.gene99983.t1 MTR_6g022500 31.132 212 98 8 1 185 92 282 8.98e-11 63.9
MS.gene99983.t1 MTR_1g066830 21.860 430 280 14 10 428 2 386 9.11e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99983.t1 AT5G53840 26.398 447 266 17 16 426 18 437 1.54e-30 122
MS.gene99983.t1 AT1G16930 27.101 476 264 18 3 426 2 446 6.28e-29 118
MS.gene99983.t1 AT1G16930 27.101 476 264 18 3 426 2 446 6.28e-29 118
MS.gene99983.t1 AT1G16930 27.101 476 264 18 3 426 2 446 6.28e-29 118
MS.gene99983.t1 AT1G78750 25.420 476 286 17 2 429 4 458 2.04e-24 105
MS.gene99983.t1 AT1G78750 25.420 476 286 17 2 429 4 458 2.04e-24 105
MS.gene99983.t1 AT4G00160 30.508 413 222 20 14 391 14 396 2.22e-24 105
MS.gene99983.t1 AT5G53635 26.211 454 264 16 18 429 2 426 1.48e-23 102
MS.gene99983.t1 AT1G13780 26.383 470 264 17 14 426 8 452 3.46e-23 101
MS.gene99983.t1 AT5G60610 27.857 420 228 18 15 396 1 383 4.51e-23 100
MS.gene99983.t1 AT5G60610 27.857 420 228 18 15 396 1 383 4.51e-23 100
MS.gene99983.t1 AT5G38570 26.698 427 248 18 15 428 1 375 1.43e-22 99.0
MS.gene99983.t1 AT5G27750 27.500 440 247 17 14 399 3 424 3.99e-22 98.6
MS.gene99983.t1 AT1G69630 24.167 480 276 16 4 429 6 451 4.96e-22 98.2
MS.gene99983.t1 AT5G44950 25.957 470 261 19 14 429 2 438 6.04e-22 97.8
MS.gene99983.t1 AT5G22660 26.316 475 252 20 14 429 11 446 9.05e-22 97.4
MS.gene99983.t1 AT5G18780 25.652 460 277 18 11 429 6 441 1.19e-21 97.1
MS.gene99983.t1 AT5G18780 25.652 460 277 18 11 429 6 441 1.19e-21 97.1
MS.gene99983.t1 AT4G26340 25.166 453 265 16 15 428 1 418 2.09e-21 96.3
MS.gene99983.t1 AT4G10400 27.316 421 227 21 15 399 1 378 4.13e-21 95.1
MS.gene99983.t1 AT4G10400 27.316 421 227 21 15 399 1 378 4.13e-21 95.1
MS.gene99983.t1 AT4G10400 27.316 421 227 21 15 399 1 378 4.13e-21 95.1
MS.gene99983.t1 AT5G56420 25.556 450 264 17 16 428 6 421 4.63e-21 95.1
MS.gene99983.t1 AT5G56420 25.556 450 264 17 16 428 6 421 4.63e-21 95.1
MS.gene99983.t1 AT5G56420 25.556 450 264 17 16 428 6 421 4.63e-21 95.1
MS.gene99983.t1 AT3G50710 26.898 461 251 21 15 426 1 424 9.01e-21 94.4
MS.gene99983.t1 AT1G78760 23.568 454 275 18 16 426 16 440 9.97e-21 94.4
MS.gene99983.t1 AT3G52680 30.425 424 214 22 14 395 19 403 1.07e-20 94.4
MS.gene99983.t1 AT2G26030 25.107 466 268 19 16 426 4 443 1.94e-20 93.6
MS.gene99983.t1 AT5G22700 26.364 440 237 18 11 398 2 406 2.36e-20 93.2
MS.gene99983.t1 AT5G22700 26.364 440 237 18 11 398 2 406 2.36e-20 93.2
MS.gene99983.t1 AT5G22700 26.364 440 237 18 11 398 2 406 2.36e-20 93.2
MS.gene99983.t1 AT5G22700 26.364 440 237 18 11 398 2 406 2.36e-20 93.2
MS.gene99983.t1 AT5G22730 24.628 471 264 17 14 426 26 463 2.53e-20 93.2
MS.gene99983.t1 AT5G22730 24.628 471 264 17 14 426 26 463 2.53e-20 93.2
MS.gene99983.t1 AT5G22700 26.714 423 220 17 2 373 32 415 4.30e-20 92.8
MS.gene99983.t1 AT2G26030 25.107 466 263 19 16 426 4 438 4.72e-20 92.4
MS.gene99983.t1 AT2G26030 25.107 466 263 19 16 426 4 438 4.72e-20 92.4
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 21 372 5.27e-20 92.0
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 12 363 5.34e-20 91.7
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 12 363 5.34e-20 91.7
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 12 363 5.34e-20 91.7
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 12 363 5.34e-20 91.7
MS.gene99983.t1 AT1G06630 27.557 352 207 10 16 332 12 350 6.14e-20 91.3
MS.gene99983.t1 AT1G06630 27.557 352 207 10 16 332 12 350 6.14e-20 91.3
MS.gene99983.t1 AT1G51370 25.169 445 268 14 16 426 19 432 1.04e-19 91.3
MS.gene99983.t1 AT1G06630 27.123 365 213 11 16 340 12 363 1.07e-19 91.7
MS.gene99983.t1 AT5G56820 28.070 456 236 22 16 426 15 423 1.34e-19 90.9
MS.gene99983.t1 AT4G00315 25.541 462 274 20 15 428 1 440 1.43e-19 90.9
MS.gene99983.t1 AT1G13780 28.829 333 175 13 14 297 8 327 1.56e-19 89.7
MS.gene99983.t1 AT5G38386 26.410 390 255 15 15 399 1 363 1.94e-19 90.1
MS.gene99983.t1 AT5G38386 26.410 390 255 15 15 399 1 363 1.94e-19 90.1
MS.gene99983.t1 AT3G42770 24.834 451 274 13 18 429 1 425 2.01e-19 90.9
MS.gene99983.t1 AT5G22610 25.670 448 266 19 16 427 18 434 4.36e-19 89.7
MS.gene99983.t1 AT1G66310 25.435 460 289 15 2 429 5 442 9.69e-19 88.6
MS.gene99983.t1 AT4G13985 23.696 460 290 15 11 426 14 456 1.06e-18 88.6
MS.gene99983.t1 AT2G26860 28.271 428 226 20 15 396 1 393 1.16e-18 87.8
MS.gene99983.t1 AT2G26860 28.271 428 226 20 15 396 1 393 1.16e-18 87.8
MS.gene99983.t1 AT5G22670 25.325 462 261 19 16 426 11 439 1.30e-18 88.2
MS.gene99983.t1 AT1G52650 24.286 420 261 13 15 390 1 407 1.33e-18 88.2
MS.gene99983.t1 AT5G56690 25.000 428 243 17 18 399 4 399 5.12e-18 85.9
MS.gene99983.t1 AT5G27750 28.338 367 209 14 14 332 3 363 5.46e-18 85.5
MS.gene99983.t1 AT4G13960 25.313 399 253 12 15 375 1 392 1.00e-17 85.5
MS.gene99983.t1 AT4G13960 25.313 399 253 12 15 375 1 392 1.00e-17 85.5
MS.gene99983.t1 AT5G38390 25.435 460 271 15 15 427 1 435 1.24e-17 85.1
MS.gene99983.t1 AT5G56370 26.915 457 254 17 15 428 1 420 1.35e-17 84.7
MS.gene99983.t1 AT5G56370 26.915 457 254 17 15 428 1 420 1.35e-17 84.7
MS.gene99983.t1 AT1G06630 27.667 300 175 8 16 286 12 298 1.50e-17 83.2
MS.gene99983.t1 AT5G56440 25.431 464 250 22 15 424 1 422 1.57e-17 84.7
MS.gene99983.t1 AT5G18770 25.486 463 276 18 14 429 22 462 2.86e-17 84.3
MS.gene99983.t1 AT5G56410 24.942 429 259 14 15 399 1 410 3.26e-17 84.0
MS.gene99983.t1 AT5G56560 26.444 450 255 18 17 428 6 417 3.47e-17 83.6
MS.gene99983.t1 AT5G22720 24.847 491 244 22 16 429 23 465 3.96e-17 83.6
MS.gene99983.t1 AT5G18780 25.464 377 223 12 11 352 6 359 5.08e-17 82.8
MS.gene99983.t1 AT5G18780 25.464 377 223 12 11 352 6 359 5.08e-17 82.8
MS.gene99983.t1 AT1G55660 24.401 459 283 19 15 428 52 491 5.90e-17 83.2
MS.gene99983.t1 AT5G41840 24.085 519 278 22 16 428 14 522 8.13e-17 83.2
MS.gene99983.t1 AT4G15060 27.273 319 166 14 5 281 16 310 8.72e-17 82.4
MS.gene99983.t1 AT5G56380 24.094 469 270 18 15 428 1 438 9.55e-17 82.4
MS.gene99983.t1 AT5G56380 24.094 469 270 18 15 428 1 438 9.55e-17 82.4
MS.gene99983.t1 AT3G51530 26.988 415 235 13 16 395 30 411 1.57e-16 81.6
MS.gene99983.t1 AT3G59200 28.075 374 194 15 16 332 7 362 1.73e-16 80.9
MS.gene99983.t1 AT1G66290 23.517 472 272 19 5 426 18 450 1.97e-16 81.6
MS.gene99983.t1 AT3G52680 32.540 252 117 11 14 231 19 251 2.37e-16 80.5
MS.gene99983.t1 AT5G38590 26.316 437 246 22 15 413 1 399 2.38e-16 80.9
MS.gene99983.t1 AT4G09920 28.309 272 147 11 15 254 1 256 2.40e-16 80.1
MS.gene99983.t1 AT4G09920 28.309 272 147 11 15 254 1 256 2.40e-16 80.1
MS.gene99983.t1 AT4G09920 27.817 284 157 11 15 266 1 268 3.09e-16 79.3
MS.gene99983.t1 AT4G09920 27.817 284 157 11 15 266 1 268 3.09e-16 79.3
MS.gene99983.t1 AT4G09920 27.817 284 157 11 15 266 1 268 3.09e-16 79.3
MS.gene99983.t1 AT3G26922 27.869 305 161 13 11 281 7 286 3.21e-16 79.3
MS.gene99983.t1 AT3G26922 27.869 305 161 13 11 281 7 286 3.21e-16 79.3
MS.gene99983.t1 AT5G56700 26.346 353 191 16 86 396 22 347 3.41e-16 80.1
MS.gene99983.t1 AT4G14096 27.488 422 255 15 16 399 8 416 3.45e-16 80.9
MS.gene99983.t1 AT4G14096 27.488 422 255 15 16 399 8 416 3.45e-16 80.9
MS.gene99983.t1 AT2G04230 26.506 415 247 14 16 395 13 404 4.65e-16 80.5
MS.gene99983.t1 AT3G59200 28.075 374 194 15 16 332 7 362 4.92e-16 80.5
MS.gene99983.t1 AT4G13965 28.009 457 251 21 9 426 3 420 6.16e-16 79.7
MS.gene99983.t1 AT3G58980 27.158 475 249 19 15 427 1 440 7.99e-16 80.1
MS.gene99983.t1 AT3G59240 25.373 469 276 18 16 429 8 457 8.04e-16 79.7
MS.gene99983.t1 AT5G56810 28.132 455 251 21 16 428 15 435 1.75e-15 78.6
MS.gene99983.t1 AT5G22700 24.658 438 222 18 2 398 32 402 1.78e-15 78.6
MS.gene99983.t1 AT5G38396 23.503 451 280 12 15 414 1 437 1.93e-15 78.6
MS.gene99983.t1 AT5G62970 25.427 468 275 20 15 428 1 448 3.12e-15 77.8
MS.gene99983.t1 AT4G15060 26.861 309 161 13 15 281 171 456 4.14e-15 77.8
MS.gene99983.t1 AT1G66300 24.078 461 272 19 15 429 28 456 5.20e-15 77.0
MS.gene99983.t1 AT3G26930 27.754 472 246 21 9 428 14 442 7.97e-15 76.6
MS.gene99983.t1 AT3G49040 28.866 291 171 10 16 284 17 293 8.45e-15 75.5
MS.gene99983.t1 AT3G58940 25.455 440 237 17 15 400 1 403 1.31e-14 76.3
MS.gene99983.t1 AT3G58940 25.455 440 237 17 15 400 1 403 1.31e-14 76.3
MS.gene99983.t1 AT3G58930 23.866 419 265 14 15 399 1 399 2.61e-14 75.1
MS.gene99983.t1 AT3G58930 23.866 419 265 14 15 399 1 399 2.61e-14 75.1
MS.gene99983.t1 AT3G26920 27.536 345 192 16 123 429 16 340 3.07e-14 73.9
MS.gene99983.t1 AT3G26920 27.536 345 192 16 123 429 16 340 3.07e-14 73.9
MS.gene99983.t1 AT5G38590 25.658 304 168 14 15 286 1 278 5.19e-14 72.8
MS.gene99983.t1 AT5G22730 24.457 368 210 12 14 332 26 374 5.65e-14 73.6
MS.gene99983.t1 AT2G42730 23.246 456 297 14 16 428 5 450 6.02e-14 73.9
MS.gene99983.t1 AT1G51370 25.000 388 230 11 16 373 19 375 6.56e-14 73.6
MS.gene99983.t1 AT3G49030 24.396 455 267 18 16 428 21 440 1.13e-13 72.8
MS.gene99983.t1 AT5G56370 27.103 321 174 11 15 307 1 289 1.36e-13 72.0
MS.gene99983.t1 AT1G05080 23.377 462 269 17 16 428 13 438 2.50e-13 72.0
MS.gene99983.t1 AT3G49020 27.315 432 230 22 9 395 11 403 2.68e-13 72.0
MS.gene99983.t1 AT3G28410 26.367 311 186 9 13 298 25 317 2.80e-13 72.0
MS.gene99983.t1 AT4G22280 26.912 353 199 13 15 332 1 329 1.11e-12 69.3
MS.gene99983.t1 AT5G22660 27.019 322 163 13 14 287 11 308 1.20e-12 68.9
MS.gene99983.t1 AT3G60040 25.000 376 218 14 16 340 13 375 1.23e-12 70.1
MS.gene99983.t1 AT3G60040 25.266 376 217 14 16 340 230 592 1.29e-12 70.1
MS.gene99983.t1 AT3G49030 24.017 458 239 18 16 428 21 414 1.32e-12 69.7
MS.gene99983.t1 AT1G66300 22.727 440 258 17 15 429 28 410 1.49e-12 69.3
MS.gene99983.t1 AT3G60040 25.266 376 217 14 16 340 232 594 1.50e-12 70.1
MS.gene99983.t1 AT1G51370 25.217 345 204 9 16 332 19 337 1.59e-12 68.9
MS.gene99983.t1 AT3G60040 25.266 376 217 14 16 340 232 594 1.84e-12 69.7
MS.gene99983.t1 AT4G26350 21.586 454 289 15 15 428 1 427 2.00e-12 68.9
MS.gene99983.t1 AT3G60040 25.266 376 217 14 16 340 233 595 2.05e-12 69.7
MS.gene99983.t1 AT4G22280 26.912 353 199 13 15 332 1 329 2.17e-12 68.9
MS.gene99983.t1 AT4G14103 25.683 366 203 14 16 332 8 353 3.88e-12 67.8
MS.gene99983.t1 AT4G14103 25.683 366 203 14 16 332 8 353 3.88e-12 67.8
MS.gene99983.t1 AT1G49610 26.638 229 115 9 9 221 5 196 4.27e-12 67.8
MS.gene99983.t1 AT4G14103 25.385 390 222 15 16 356 8 377 4.32e-12 68.2
MS.gene99983.t1 AT3G59190 26.209 393 218 17 16 352 12 388 7.55e-12 67.4
MS.gene99983.t1 AT4G10420 24.484 339 205 13 122 428 2 321 7.94e-12 66.6
MS.gene99983.t1 AT5G41630 27.363 201 112 5 14 185 10 205 8.48e-12 67.4
MS.gene99983.t1 AT1G60400 22.462 325 207 10 14 306 12 323 8.57e-12 67.0
MS.gene99983.t1 AT5G56400 23.160 462 270 15 14 428 31 454 1.17e-11 66.6
MS.gene99983.t1 AT5G18770 26.966 356 205 14 14 329 22 362 1.30e-11 66.2
MS.gene99983.t1 AT1G66320 23.651 482 266 20 5 429 21 457 1.47e-11 66.6
MS.gene99983.t1 AT3G59190 26.810 373 201 17 16 332 12 368 2.44e-11 65.5

Find 99 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTTAGTCCTGAATCTT+TGG 0.225367 8.4:-39306508 MS.gene99983:CDS
GAAAATGAGCTGGAATTTAT+TGG 0.228561 8.4:-39305760 MS.gene99983:CDS
AAACTCCGGAAAATGTAAAA+TGG 0.241590 8.4:+39306096 None:intergenic
CTGAATCTTTGGACATAATT+CGG 0.268479 8.4:-39306497 MS.gene99983:CDS
ATTCGTTGCCTTCATATAGA+TGG 0.301405 8.4:-39305855 MS.gene99983:CDS
AAATGGGATATGAGGCATTT+AGG 0.311419 8.4:+39305811 None:intergenic
GCTCATATGAACGGAGGTTT+TGG 0.311750 8.4:+39307328 None:intergenic
CGAATTATGTCCAAAGATTC+AGG 0.318966 8.4:+39306498 None:intergenic
CAATGATTGTTGATGAATAT+TGG 0.328994 8.4:-39305705 MS.gene99983:CDS
AATCTCCTTCGAGCTCTTTC+CGG 0.331425 8.4:-39306267 MS.gene99983:CDS
TTCCGTGATGCCGCGGCTGT+TGG 0.352559 8.4:-39306366 MS.gene99983:CDS
CTGTCCTGTTCTTGAGAATC+TGG 0.359442 8.4:-39306535 MS.gene99983:CDS
AGAGGGTGAGATTAAATTCC+TGG 0.363398 8.4:+39307039 None:intergenic
AAAATGAGCTGGAATTTATT+GGG 0.368042 8.4:-39305759 MS.gene99983:CDS
CTCAAGTACCTTAGCCTTGA+AGG 0.369562 8.4:-39306396 MS.gene99983:CDS
TCCGTGATGCCGCGGCTGTT+GGG 0.374852 8.4:-39306365 MS.gene99983:CDS
CTCGCAAATGGCGCAACCTC+TGG 0.377437 8.4:-39307298 MS.gene99983:CDS
TCCGTCGCTCACGCGTCGTT+CGG 0.384887 8.4:-39307154 MS.gene99983:CDS
AAAAGTGAATAAAGGTCAAA+TGG 0.385833 8.4:+39305794 None:intergenic
TGAATCTTTGGACATAATTC+GGG 0.390671 8.4:-39306496 MS.gene99983:CDS
TAGTTCTAGACGTTTAATTC+CGG 0.398389 8.4:+39306248 None:intergenic
AACTCCGGAAAATGTAAAAT+GGG 0.406590 8.4:+39306097 None:intergenic
CGCCATTGGGCCCCACCTCC+AGG 0.411986 8.4:-39307057 MS.gene99983:CDS
AAGAGAAGAGTGTGAGAGGT+AGG 0.423108 8.4:+39306994 None:intergenic
TTGATAATAACGTTGGGGCT+TGG 0.431994 8.4:-39306440 MS.gene99983:CDS
AAGCAAAGAATGGATCGTTT+AGG 0.433146 8.4:+39307105 None:intergenic
TTTAACCTCTTCAAGGAAGA+TGG 0.437384 8.4:+39306471 None:intergenic
TGTTCGTTGAATTCGTCATC+GGG 0.437656 8.4:+39307218 None:intergenic
AGTTCCAGATTCTCAAGAAC+AGG 0.438974 8.4:+39306531 None:intergenic
TCACTGTTGATAATAACGTT+GGG 0.441226 8.4:-39306446 MS.gene99983:CDS
AATCTCACCCTCTTTACTGC+TGG 0.442889 8.4:-39307029 MS.gene99983:CDS
CACGGAATGTGATCCCTTCA+AGG 0.450691 8.4:+39306382 None:intergenic
TAAAGGTCAAATGGGATATG+AGG 0.466574 8.4:+39305803 None:intergenic
TTGTTCGTTGAATTCGTCAT+CGG 0.482869 8.4:+39307217 None:intergenic
CGTGGCTCAGTATCGCCATT+GGG 0.488486 8.4:-39307070 MS.gene99983:CDS
GCTATGAGAGTTTCTAGCAT+TGG 0.489509 8.4:+39305998 None:intergenic
GAGCAAGAGAAGAGTGTGAG+AGG 0.493002 8.4:+39306990 None:intergenic
TTCGTTGCCTTCATATAGAT+GGG 0.495093 8.4:-39305854 MS.gene99983:CDS
ACATCCGTAAAAGTGAATAA+AGG 0.501125 8.4:+39305786 None:intergenic
TGAGCCTAGTCTCTCGCAAA+TGG 0.501842 8.4:-39307310 MS.gene99983:CDS
ATCACTGTTGATAATAACGT+TGG 0.506326 8.4:-39306447 MS.gene99983:CDS
TTCCTGGAGGTGGGGCCCAA+TGG 0.507405 8.4:+39307055 None:intergenic
GAGATTAAATTCCTGGAGGT+GGG 0.510070 8.4:+39307046 None:intergenic
AAAGTGAATAAAGGTCAAAT+GGG 0.512234 8.4:+39305795 None:intergenic
TGTGAGAGGTAGGTTGTTGA+AGG 0.512486 8.4:+39307004 None:intergenic
TGAGATTAAATTCCTGGAGG+TGG 0.517495 8.4:+39307045 None:intergenic
TGGCACATGGCAGATCCTCT+TGG 0.523168 8.4:+39305640 None:intergenic
TCGACTGAGTAAGCAAAGAA+TGG 0.539936 8.4:+39307095 None:intergenic
GGCGAGACCAACCAGACCGC+TGG 0.544821 8.4:-39305684 MS.gene99983:CDS
ACGTGGCTCAGTATCGCCAT+TGG 0.547510 8.4:-39307071 MS.gene99983:CDS
TCCGAACGACGCGTGAGCGA+CGG 0.553880 8.4:+39307153 None:intergenic
CAGATTCTCAAGAACAGGAC+AGG 0.554356 8.4:+39306536 None:intergenic
TTTGCCTCCCATCTATATGA+AGG 0.559497 8.4:+39305847 None:intergenic
ATGTGATCCCTTCAAGGCTA+AGG 0.560362 8.4:+39306388 None:intergenic
TCAGTCAGAGAAATTTAACT+TGG 0.568365 8.4:+39305620 None:intergenic
TGAAGGCACCAGCAGTAAAG+AGG 0.569444 8.4:+39307021 None:intergenic
TGAAGCAAATAGTGAAACTC+CGG 0.573562 8.4:+39306082 None:intergenic
CGCGTGAGCGACGGAGAGCG+AGG 0.574663 8.4:+39307162 None:intergenic
CGGATGTCCAGAAAATGAGC+TGG 0.574811 8.4:-39305770 MS.gene99983:CDS
AGAATGGATCGTTTAGGATG+TGG 0.575368 8.4:+39307111 None:intergenic
TCCCAACAGCCGCGGCATCA+CGG 0.577725 8.4:+39306364 None:intergenic
GGGTGCCATCTTCCTTGAAG+AGG 0.580167 8.4:-39306476 MS.gene99983:CDS
GAACAGGACAGGCTGAGAGA+AGG 0.583613 8.4:+39306547 None:intergenic
TCAAGTACCTTAGCCTTGAA+GGG 0.585522 8.4:-39306395 MS.gene99983:CDS
CACTGTTGATAATAACGTTG+GGG 0.587506 8.4:-39306445 MS.gene99983:CDS
GGATGTGGTCGGAGGAGAGA+CGG 0.588995 8.4:+39307126 None:intergenic
TGCGCCATTTGCGAGAGACT+AGG 0.591445 8.4:+39307306 None:intergenic
AGATTAAATTCCTGGAGGTG+GGG 0.594581 8.4:+39307047 None:intergenic
TTCGTTGAATTCGTCATCGG+GGG 0.595692 8.4:+39307220 None:intergenic
GAAGGCACCAGCAGTAAAGA+GGG 0.604956 8.4:+39307022 None:intergenic
GATCACATTCCGTGATGCCG+CGG 0.609193 8.4:-39306373 MS.gene99983:CDS
TGGCTTGAAATAGATGCACC+TGG 0.612723 8.4:-39306420 MS.gene99983:CDS
GGCTGAGAGAAGGATATGCA+TGG 0.614181 8.4:+39306557 None:intergenic
GAAAACTTCAGTCACCTTTG+GGG 0.614942 8.4:+39306215 None:intergenic
TTGCTTACTCAGTCGACACG+TGG 0.615356 8.4:-39307088 MS.gene99983:CDS
GCTCGAAGGAGATTGAGTAA+AGG 0.617059 8.4:+39306276 None:intergenic
TGCCATCGTTGTTCTCTCCG+AGG 0.617584 8.4:+39307411 None:intergenic
AGAGACTAGGCTCATATGAA+CGG 0.623679 8.4:+39307319 None:intergenic
AGGCTAAGGTACTTGAGACC+AGG 0.624770 8.4:+39306402 None:intergenic
ATTTAGTTTCGACATCGACA+TGG 0.626202 8.4:-39305975 MS.gene99983:intron
GTGCAAGTTCCCAACAGCCG+CGG 0.628805 8.4:+39306356 None:intergenic
ACTCCGGAAAATGTAAAATG+GGG 0.632256 8.4:+39306098 None:intergenic
AAAATTTCAGATCTACCAAG+AGG 0.633493 8.4:-39305655 MS.gene99983:CDS
AGACTTCGAGATATTTCCAG+AGG 0.634600 8.4:+39307282 None:intergenic
GAGAAATTTAACTTGGCACA+TGG 0.635924 8.4:+39305627 None:intergenic
TGTATTCATTGCATTTGTCG+CGG 0.641710 8.4:+39307252 None:intergenic
ACTACATAATTCAACCCCAA+AGG 0.648139 8.4:-39306229 MS.gene99983:intron
ATCGTTTAGGATGTGGTCGG+AGG 0.648456 8.4:+39307118 None:intergenic
GTTCGTTGAATTCGTCATCG+GGG 0.649274 8.4:+39307219 None:intergenic
CTCCGGAAAATGTAAAATGG+GGG 0.656185 8.4:+39306099 None:intergenic
TGGATCGTTTAGGATGTGGT+CGG 0.656581 8.4:+39307115 None:intergenic
TAATTCCGGAAAGAGCTCGA+AGG 0.661187 8.4:+39306262 None:intergenic
GTTGCCTTCATATAGATGGG+AGG 0.669069 8.4:-39305851 MS.gene99983:CDS
GAGGACAGTGTTGACGAAGA+CGG 0.673557 8.4:+39307181 None:intergenic
GCGGAAGAAGAAAACAACCT+CGG 0.677675 8.4:-39307428 MS.gene99983:CDS
GACTAGGCTCATATGAACGG+AGG 0.695867 8.4:+39307322 None:intergenic
TGTTGGGAACTTGCACAGCG+TGG 0.697966 8.4:-39306349 MS.gene99983:CDS
AACCTCGGAGAGAACAACGA+TGG 0.700951 8.4:-39307413 MS.gene99983:CDS
GGGTGAGATTAAATTCCTGG+AGG 0.740357 8.4:+39307042 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAAATAAAGAAAAG+AGG + chr8.4:39306132-39306151 None:intergenic 15.0%
!! GCTATATATAAGAGAAAATT+GGG + chr8.4:39306249-39306268 None:intergenic 20.0%
!! TGCTATATATAAGAGAAAAT+TGG + chr8.4:39306250-39306269 None:intergenic 20.0%
! AAAAGTGAATAAAGGTCAAA+TGG + chr8.4:39307264-39307283 None:intergenic 25.0%
! AAAATGAGCTGGAATTTATT+GGG - chr8.4:39307296-39307315 MS.gene99983:CDS 25.0%
! AAAGTGAATAAAGGTCAAAT+GGG + chr8.4:39307263-39307282 None:intergenic 25.0%
! TAAAGAAAAGAGGATGAAAT+AGG + chr8.4:39306122-39306141 None:intergenic 25.0%
!! CAATGATTGTTGATGAATAT+TGG - chr8.4:39307350-39307369 MS.gene99983:CDS 25.0%
!! TTTTCTCTTATATATAGCAC+CGG - chr8.4:39306251-39306270 MS.gene99983:CDS 25.0%
!!! AACAAAAAAGTTGAGTTGAA+AGG + chr8.4:39307018-39307037 None:intergenic 25.0%
!!! ACAAAAAAGTTGAGTTGAAA+GGG + chr8.4:39307017-39307036 None:intergenic 25.0%
!!! TTGACCTTTATTCACTTTTA+CGG - chr8.4:39307265-39307284 MS.gene99983:CDS 25.0%
AAAATTTCAGATCTACCAAG+AGG - chr8.4:39307400-39307419 MS.gene99983:CDS 30.0%
AAACTCCGGAAAATGTAAAA+TGG + chr8.4:39306962-39306981 None:intergenic 30.0%
AACTCCGGAAAATGTAAAAT+GGG + chr8.4:39306961-39306980 None:intergenic 30.0%
ACATCCGTAAAAGTGAATAA+AGG + chr8.4:39307272-39307291 None:intergenic 30.0%
CTGAATCTTTGGACATAATT+CGG - chr8.4:39306558-39306577 MS.gene99983:CDS 30.0%
GAAAATGAGCTGGAATTTAT+TGG - chr8.4:39307295-39307314 MS.gene99983:CDS 30.0%
TAAAGTTAAACTACTTCCTC+CGG + chr8.4:39306273-39306292 None:intergenic 30.0%
TGAATCTTTGGACATAATTC+GGG - chr8.4:39306559-39306578 MS.gene99983:CDS 30.0%
TTTCTTTAGTCCTGAATCTT+TGG - chr8.4:39306547-39306566 MS.gene99983:CDS 30.0%
! AGTGATTTTTAACCTCTTCA+AGG + chr8.4:39306594-39306613 None:intergenic 30.0%
! ATAAATTCCAGCTCATTTTC+TGG + chr8.4:39307295-39307314 None:intergenic 30.0%
! ATCTGATCCAAATTTTGAAC+CGG + chr8.4:39306208-39306227 None:intergenic 30.0%
! ATTGGGTATATTTTGCAACA+TGG - chr8.4:39307313-39307332 MS.gene99983:CDS 30.0%
! CATTCCATTGTTATTGTCTA+GGG - chr8.4:39306155-39306174 MS.gene99983:intron 30.0%
!! AAAAAAGTTGAGTTGAAAGG+GGG + chr8.4:39307015-39307034 None:intergenic 30.0%
!! AATTCGAAAGTTGATGTATC+CGG - chr8.4:39306186-39306205 MS.gene99983:intron 30.0%
!! ATCACTGTTGATAATAACGT+TGG - chr8.4:39306608-39306627 MS.gene99983:intron 30.0%
!! CAAAAAAGTTGAGTTGAAAG+GGG + chr8.4:39307016-39307035 None:intergenic 30.0%
!! TAGTTCTAGACGTTTAATTC+CGG + chr8.4:39306810-39306829 None:intergenic 30.0%
!! TCACTGTTGATAATAACGTT+GGG - chr8.4:39306609-39306628 MS.gene99983:intron 30.0%
!!! CTGAAATTTTTTTCATCCAG+CGG + chr8.4:39307390-39307409 None:intergenic 30.0%
!!! GTGTTCGTGTTTTTTTTGTT+TGG - chr8.4:39307130-39307149 MS.gene99983:CDS 30.0%
AAGCAAAGAATGGATCGTTT+AGG + chr8.4:39305953-39305972 None:intergenic 35.0%
ACTACATAATTCAACCCCAA+AGG - chr8.4:39306826-39306845 MS.gene99983:intron 35.0%
ACTCCGGAAAATGTAAAATG+GGG + chr8.4:39306960-39306979 None:intergenic 35.0%
ATGAAAACTTCAGTCACCTT+TGG + chr8.4:39306845-39306864 None:intergenic 35.0%
ATGTAATGTAACAGTCTCAG+TGG - chr8.4:39306380-39306399 MS.gene99983:CDS 35.0%
ATTCGTTGCCTTCATATAGA+TGG - chr8.4:39307200-39307219 MS.gene99983:CDS 35.0%
CGAATTATGTCCAAAGATTC+AGG + chr8.4:39306560-39306579 None:intergenic 35.0%
CTAACCCTAGACAATAACAA+TGG + chr8.4:39306162-39306181 None:intergenic 35.0%
GATGTATCCGGTTCAAAATT+TGG - chr8.4:39306198-39306217 MS.gene99983:intron 35.0%
TAAAGGTCAAATGGGATATG+AGG + chr8.4:39307255-39307274 None:intergenic 35.0%
TGAAAACTTCAGTCACCTTT+GGG + chr8.4:39306844-39306863 None:intergenic 35.0%
TGAAGCAAATAGTGAAACTC+CGG + chr8.4:39306976-39306995 None:intergenic 35.0%
TGTATTCATTGCATTTGTCG+CGG + chr8.4:39305806-39305825 None:intergenic 35.0%
TTCGTTGCCTTCATATAGAT+GGG - chr8.4:39307201-39307220 MS.gene99983:CDS 35.0%
TTGTTCGTTGAATTCGTCAT+CGG + chr8.4:39305841-39305860 None:intergenic 35.0%
TTTAACCTCTTCAAGGAAGA+TGG + chr8.4:39306587-39306606 None:intergenic 35.0%
! AAATGGGATATGAGGCATTT+AGG + chr8.4:39307247-39307266 None:intergenic 35.0%
! ATTTAGTTTCGACATCGACA+TGG - chr8.4:39307080-39307099 MS.gene99983:CDS 35.0%
! GCATTCCATTGTTATTGTCT+AGG - chr8.4:39306154-39306173 MS.gene99983:intron 35.0%
!! AACAGATTCACTTTTAGGAG+TGG + chr8.4:39306756-39306775 None:intergenic 35.0%
!! ACAGATTCACTTTTAGGAGT+GGG + chr8.4:39306755-39306774 None:intergenic 35.0%
!! CACTGTTGATAATAACGTTG+GGG - chr8.4:39306610-39306629 MS.gene99983:intron 35.0%
!! GAGAAATTTAACTTGGCACA+TGG + chr8.4:39307431-39307450 None:intergenic 35.0%
AAATAGCCACTGCTTGTACA+CGG + chr8.4:39306932-39306951 None:intergenic 40.0%
AATCAAATGATCGATCCACC+TGG + chr8.4:39307183-39307202 None:intergenic 40.0%
ACGGTAAGCAAATTTCCGAA+GGG + chr8.4:39306430-39306449 None:intergenic 40.0%
AGACTTCGAGATATTTCCAG+AGG + chr8.4:39305776-39305795 None:intergenic 40.0%
AGAGACTAGGCTCATATGAA+CGG + chr8.4:39305739-39305758 None:intergenic 40.0%
AGAGGGTGAGATTAAATTCC+TGG + chr8.4:39306019-39306038 None:intergenic 40.0%
AGATTAAATTCCTGGAGGTG+GGG + chr8.4:39306011-39306030 None:intergenic 40.0%
AGTTCCAGATTCTCAAGAAC+AGG + chr8.4:39306527-39306546 None:intergenic 40.0%
CAACAAAGCTCGAGTTAAAC+TGG + chr8.4:39307111-39307130 None:intergenic 40.0%
CTCCGGAAAATGTAAAATGG+GGG + chr8.4:39306959-39306978 None:intergenic 40.0%
GAAAACTTCAGTCACCTTTG+GGG + chr8.4:39306843-39306862 None:intergenic 40.0%
GAGATTAAATTCCTGGAGGT+GGG + chr8.4:39306012-39306031 None:intergenic 40.0%
TCGACTGAGTAAGCAAAGAA+TGG + chr8.4:39305963-39305982 None:intergenic 40.0%
TGAGATTAAATTCCTGGAGG+TGG + chr8.4:39306013-39306032 None:intergenic 40.0%
TGTTCGTTGAATTCGTCATC+GGG + chr8.4:39305840-39305859 None:intergenic 40.0%
TTTGCCTCCCATCTATATGA+AGG + chr8.4:39307211-39307230 None:intergenic 40.0%
! AATTTGCTTACCGTCGTTGA+AGG - chr8.4:39306436-39306455 MS.gene99983:CDS 40.0%
! AGAATGGATCGTTTAGGATG+TGG + chr8.4:39305947-39305966 None:intergenic 40.0%
! TCTCTTATATATAGCACCGG+AGG - chr8.4:39306254-39306273 MS.gene99983:CDS 40.0%
! TGCCCCCATTTTACATTTTC+CGG - chr8.4:39306954-39306973 MS.gene99983:intron 40.0%
! TTGATAATAACGTTGGGGCT+TGG - chr8.4:39306615-39306634 MS.gene99983:intron 40.0%
!! ATATGAACGGAGGTTTTGGT+TGG + chr8.4:39305726-39305745 None:intergenic 40.0%
!! GCTATGAGAGTTTCTAGCAT+TGG + chr8.4:39307060-39307079 None:intergenic 40.0%
!! GGCTCAACAGATTCACTTTT+AGG + chr8.4:39306761-39306780 None:intergenic 40.0%
!! TCAAGTACCTTAGCCTTGAA+GGG - chr8.4:39306660-39306679 MS.gene99983:intron 40.0%
!!! ATTTTTTTCATCCAGCGGTC+TGG + chr8.4:39307385-39307404 None:intergenic 40.0%
AATCTCACCCTCTTTACTGC+TGG - chr8.4:39306026-39306045 MS.gene99983:CDS 45.0%
AATCTCCTTCGAGCTCTTTC+CGG - chr8.4:39306788-39306807 MS.gene99983:intron 45.0%
ATGTGATCCCTTCAAGGCTA+AGG + chr8.4:39306670-39306689 None:intergenic 45.0%
ATTTCCGAAGGGTCTTGCAA+TGG + chr8.4:39306419-39306438 None:intergenic 45.0%
CAGATTCTCAAGAACAGGAC+AGG + chr8.4:39306522-39306541 None:intergenic 45.0%
CTGTCCTGTTCTTGAGAATC+TGG - chr8.4:39306520-39306539 MS.gene99983:CDS 45.0%
GACGGTAAGCAAATTTCCGA+AGG + chr8.4:39306431-39306450 None:intergenic 45.0%
GCGGAAGAAGAAAACAACCT+CGG - chr8.4:39305627-39305646 MS.gene99983:CDS 45.0%
GCTCGAAGGAGATTGAGTAA+AGG + chr8.4:39306782-39306801 None:intergenic 45.0%
GGGTGAGATTAAATTCCTGG+AGG + chr8.4:39306016-39306035 None:intergenic 45.0%
GTTCGTTGAATTCGTCATCG+GGG + chr8.4:39305839-39305858 None:intergenic 45.0%
GTTGCCTTCATATAGATGGG+AGG - chr8.4:39307204-39307223 MS.gene99983:CDS 45.0%
TAATTCCGGAAAGAGCTCGA+AGG + chr8.4:39306796-39306815 None:intergenic 45.0%
TGGCTTGAAATAGATGCACC+TGG - chr8.4:39306635-39306654 MS.gene99983:intron 45.0%
TGTGAGAGGTAGGTTGTTGA+AGG + chr8.4:39306054-39306073 None:intergenic 45.0%
TTCGTTGAATTCGTCATCGG+GGG + chr8.4:39305838-39305857 None:intergenic 45.0%
! AAGAGAAGAGTGTGAGAGGT+AGG + chr8.4:39306064-39306083 None:intergenic 45.0%
! GCTCATATGAACGGAGGTTT+TGG + chr8.4:39305730-39305749 None:intergenic 45.0%
! TGGATCGTTTAGGATGTGGT+CGG + chr8.4:39305943-39305962 None:intergenic 45.0%
!! CTCAAGTACCTTAGCCTTGA+AGG - chr8.4:39306659-39306678 MS.gene99983:intron 45.0%
AACCTCGGAGAGAACAACGA+TGG - chr8.4:39305642-39305661 MS.gene99983:CDS 50.0%
AGTTCCAGCACCTTCAACGA+CGG + chr8.4:39306449-39306468 None:intergenic 50.0%
ATCGATCCACCTGGCAACAA+GGG + chr8.4:39307174-39307193 None:intergenic 50.0%
CACGGAATGTGATCCCTTCA+AGG + chr8.4:39306676-39306695 None:intergenic 50.0%
CGGATGTCCAGAAAATGAGC+TGG - chr8.4:39307285-39307304 MS.gene99983:CDS 50.0%
GACTAGGCTCATATGAACGG+AGG + chr8.4:39305736-39305755 None:intergenic 50.0%
GCTCTAACCTTGTCTCTCTC+AGG - chr8.4:39306084-39306103 MS.gene99983:CDS 50.0%
GGCTGAGAGAAGGATATGCA+TGG + chr8.4:39306501-39306520 None:intergenic 50.0%
GTTGCCATTGCAAGACCCTT+CGG - chr8.4:39306412-39306431 MS.gene99983:CDS 50.0%
TGAGCCTAGTCTCTCGCAAA+TGG - chr8.4:39305745-39305764 MS.gene99983:CDS 50.0%
TTGCATGCCTGAGAGAGACA+AGG + chr8.4:39306094-39306113 None:intergenic 50.0%
TTGCTTACTCAGTCGACACG+TGG - chr8.4:39305967-39305986 MS.gene99983:intron 50.0%
! AGGCTAAGGTACTTGAGACC+AGG + chr8.4:39306656-39306675 None:intergenic 50.0%
! ATCGTTTAGGATGTGGTCGG+AGG + chr8.4:39305940-39305959 None:intergenic 50.0%
! CTTTTGCCGTGTACAAGCAG+TGG - chr8.4:39306923-39306942 MS.gene99983:intron 50.0%
! GAGCAAGAGAAGAGTGTGAG+AGG + chr8.4:39306068-39306087 None:intergenic 50.0%
! TTTTCATCCAGCGGTCTGGT+TGG + chr8.4:39307381-39307400 None:intergenic 50.0%
!! GAAGGCACCAGCAGTAAAGA+GGG + chr8.4:39306036-39306055 None:intergenic 50.0%
!! GAGGACAGTGTTGACGAAGA+CGG + chr8.4:39305877-39305896 None:intergenic 50.0%
!! TGAAGGCACCAGCAGTAAAG+AGG + chr8.4:39306037-39306056 None:intergenic 50.0%
!!! GAACGGAGGTTTTGGTTGGA+AGG + chr8.4:39305722-39305741 None:intergenic 50.0%
!!! GGAGGTTTTGGTTGGAAGGA+AGG + chr8.4:39305718-39305737 None:intergenic 50.0%
ACGTGGCTCAGTATCGCCAT+TGG - chr8.4:39305984-39306003 MS.gene99983:CDS 55.0%
ATCAGTTGCCCCTTGTTGCC+AGG - chr8.4:39307162-39307181 MS.gene99983:CDS 55.0%
CGTGGCTCAGTATCGCCATT+GGG - chr8.4:39305985-39306004 MS.gene99983:CDS 55.0%
GAACAGGACAGGCTGAGAGA+AGG + chr8.4:39306511-39306530 None:intergenic 55.0%
GATCACATTCCGTGATGCCG+CGG - chr8.4:39306682-39306701 MS.gene99983:intron 55.0%
GATCGATCCACCTGGCAACA+AGG + chr8.4:39307175-39307194 None:intergenic 55.0%
TCGATCCACCTGGCAACAAG+GGG + chr8.4:39307173-39307192 None:intergenic 55.0%
TGAATTCGTCATCGGGGGCT+TGG + chr8.4:39305833-39305852 None:intergenic 55.0%
TGCCATCGTTGTTCTCTCCG+AGG + chr8.4:39305647-39305666 None:intergenic 55.0%
TGCGCCATTTGCGAGAGACT+AGG + chr8.4:39305752-39305771 None:intergenic 55.0%
TGGCACATGGCAGATCCTCT+TGG + chr8.4:39307418-39307437 None:intergenic 55.0%
TGTTGGGAACTTGCACAGCG+TGG - chr8.4:39306706-39306725 MS.gene99983:intron 55.0%
! CTTACCGTCGTTGAAGGTGC+TGG - chr8.4:39306442-39306461 MS.gene99983:CDS 55.0%
! GGGTGCCATCTTCCTTGAAG+AGG - chr8.4:39306579-39306598 MS.gene99983:CDS 55.0%
AGTTGCCCCTTGTTGCCAGG+TGG - chr8.4:39307165-39307184 MS.gene99983:CDS 60.0%
CTCGCAAATGGCGCAACCTC+TGG - chr8.4:39305757-39305776 MS.gene99983:CDS 60.0%
GGATGTGGTCGGAGGAGAGA+CGG + chr8.4:39305932-39305951 None:intergenic 60.0%
GTGCAAGTTCCCAACAGCCG+CGG + chr8.4:39306702-39306721 None:intergenic 60.0%
TCCCAACAGCCGCGGCATCA+CGG + chr8.4:39306694-39306713 None:intergenic 65.0%
TCCGAACGACGCGTGAGCGA+CGG + chr8.4:39305905-39305924 None:intergenic 65.0%
TCCGTCGCTCACGCGTCGTT+CGG - chr8.4:39305901-39305920 MS.gene99983:intron 65.0%
TCCGTGATGCCGCGGCTGTT+GGG - chr8.4:39306690-39306709 MS.gene99983:intron 65.0%
TTCCGTGATGCCGCGGCTGT+TGG - chr8.4:39306689-39306708 MS.gene99983:intron 65.0%
TTCCTGGAGGTGGGGCCCAA+TGG + chr8.4:39306003-39306022 None:intergenic 65.0%
GGCGAGACCAACCAGACCGC+TGG - chr8.4:39307371-39307390 MS.gene99983:CDS 70.0%
CGCCATTGGGCCCCACCTCC+AGG - chr8.4:39305998-39306017 MS.gene99983:CDS 75.0%
CGCGTGAGCGACGGAGAGCG+AGG + chr8.4:39305896-39305915 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 39305624 39307453 39305624 ID=MS.gene99983
chr8.4 mRNA 39305624 39307453 39305624 ID=MS.gene99983.t1;Parent=MS.gene99983
chr8.4 exon 39306983 39307453 39306983 ID=MS.gene99983.t1.exon1;Parent=MS.gene99983.t1
chr8.4 CDS 39306983 39307453 39306983 ID=cds.MS.gene99983.t1;Parent=MS.gene99983.t1
chr8.4 exon 39306230 39306619 39306230 ID=MS.gene99983.t1.exon2;Parent=MS.gene99983.t1
chr8.4 CDS 39306230 39306619 39306230 ID=cds.MS.gene99983.t1;Parent=MS.gene99983.t1
chr8.4 exon 39305976 39306134 39305976 ID=MS.gene99983.t1.exon3;Parent=MS.gene99983.t1
chr8.4 CDS 39305976 39306134 39305976 ID=cds.MS.gene99983.t1;Parent=MS.gene99983.t1
chr8.4 exon 39305624 39305893 39305624 ID=MS.gene99983.t1.exon4;Parent=MS.gene99983.t1
chr8.4 CDS 39305624 39305893 39305624 ID=cds.MS.gene99983.t1;Parent=MS.gene99983.t1
Gene Sequence

>MS.gene99983

ATGGCGGAAGAAGAAAACAACCTCGGAGAGAACAACGATGGCATTGACAGAATTAGCACTCTATCAAACTCTCTATTGTGTCACATTCTCTCCTTCCTTCCAACCAAAACCTCCGTTCATATGAGCCTAGTCTCTCGCAAATGGCGCAACCTCTGGAAATATCTCGAAGTCTTCGATTTCCGCGACAAATGCAATGAATACAGCTACCAAGCCCCCGATGACGAATTCAACGAACAATTCATGCTGTTCACCGTCTTCGTCAACACTGTCCTCGCTCTCCGTCGCTCACGCGTCGTTCGGAAGTTCCGTCTCTCCTCCGACCACATCCTAAACGATCCATTCTTTGCTTACTCAGTCGACACGTGGCTCAGTATCGCCATTGGGCCCCACCTCCAGGAATTTAATCTCACCCTCTTTACTGCTGGTGCCTTCAACAACCTACCTCTCACACTCTTCTCTTGCTCTAACCTTGTCTCTCTCAGGCATGCAACAATTCCTATTTCATCCTCTTTTCTTTATTTTTGTTTTCTGCATTCCATTGTTATTGTCTAGGGTTAGAGAAAATTCGAAAGTTGATGTATCCGGTTCAAAATTTGGATCAGATACATCAACTTTTTGTTAACCCAATTTTCTCTTATATATAGCACCGGAGGAAGTAGTTTAACTTTAATTTTTATGCTTGTTCAATTTAGCTGTTTTGATTTAATTTAAATGAGATATGATACATGATGATAACTTAACATAACACATTCATGAATGTAATGTAACAGTCTCAGTGGATATATATTGTTGCCATTGCAAGACCCTTCGGAAATTTGCTTACCGTCGTTGAAGGTGCTGGAACTACTACAAATGCATCACTTGAATTTGAGTTCCATGCATATCCTTCTCTCAGCCTGTCCTGTTCTTGAGAATCTGGAACTTTTCTTTAGTCCTGAATCTTTGGACATAATTCGGGTGCCATCTTCCTTGAAGAGGTTAAAAATCACTGTTGATAATAACGTTGGGGCTTGGCTTGAAATAGATGCACCTGGTCTCAAGTACCTTAGCCTTGAAGGGATCACATTCCGTGATGCCGCGGCTGTTGGGAACTTGCACAGCGTGGAAGAAGCATATCTTGATGTATTTCCCACTCCTAAAAGTGAATCTGTTGAGCCTTTACTCAATCTCCTTCGAGCTCTTTCCGGAATTAAACGTCTAGAACTACATAATTCAACCCCAAAGGTGACTGAAGTTTTCATTATTTGTAGTATATGTTGTTTTGTAGTAATAATTATTAAATAATCATTTAATCACTTGCTTTTGCCGTGTACAAGCAGTGGCTATTTGCTGCCCCCATTTTACATTTTCCGGAGTTTCACTATTTGCTTCATCTAAAGCTTAAGTATCCCCCTTTCAACTCAACTTTTTTGTTCGACGTGCTTCAAAAATGTCCAATGCTAGAAACTCTCATAGCATTTAGTTTCGACATCGACATGGTTTGTCCAGTTTAACTCGAGCTTTGTTGTGTTCGTGTTTTTTTTGTTTGGATCTTATATATCAGTTGCCCCTTGTTGCCAGGTGGATCGATCATTTGATTCGTTGCCTTCATATAGATGGGAGGCAAAGTCTAAAAGTGTTCCTAAATGCCTCATATCCCATTTGACCTTTATTCACTTTTACGGATGTCCAGAAAATGAGCTGGAATTTATTGGGTATATTTTGCAACATGGACTTGTTTTGAAGACAATGATTGTTGATGAATATTGGCGAGACCAACCAGACCGCTGGATGAAAAAAATTTCAGATCTACCAAGAGGATCTGCCATGTGCCAAGTTAAATTTCTCTGA

Protein sequence

>MS.gene99983.t1

MAEEENNLGENNDGIDRISTLSNSLLCHILSFLPTKTSVHMSLVSRKWRNLWKYLEVFDFRDKCNEYSYQAPDDEFNEQFMLFTVFVNTVLALRRSRVVRKFRLSSDHILNDPFFAYSVDTWLSIAIGPHLQEFNLTLFTAGAFNNLPLTLFSCSNLVLELLQMHHLNLSSMHILLSACPVLENLELFFSPESLDIIRVPSSLKRLKITVDNNVGAWLEIDAPGLKYLSLEGITFRDAAAVGNLHSVEEAYLDVFPTPKSESVEPLLNLLRALSGIKRLELHNSTPKWLFAAPILHFPEFHYLLHLKLKYPPFNSTFLFDVLQKCPMLETLIAFSFDIDMVDRSFDSLPSYRWEAKSKSVPKCLISHLTFIHFYGCPENELEFIGYILQHGLVLKTMIVDEYWRDQPDRWMKKISDLPRGSAMCQVKFL