AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21682


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21682.t1 MTR_5g008920 85.604 389 50 4 1 386 1 386 0.0 679
MS.gene21682.t1 MTR_5g008950 57.560 377 145 9 12 383 1 367 7.44e-141 405
MS.gene21682.t1 MTR_1g041245 40.302 397 204 13 3 381 5 386 5.09e-78 246
MS.gene21682.t1 MTR_7g056433 38.636 396 221 12 1 381 1 389 9.17e-72 229
MS.gene21682.t1 MTR_7g032380 36.176 387 206 10 2 381 4 356 6.71e-68 218
MS.gene21682.t1 MTR_7g032370 37.895 380 187 11 22 381 2 352 1.53e-64 209
MS.gene21682.t1 MTR_7g115270 37.056 394 213 13 12 378 14 399 2.09e-63 208
MS.gene21682.t1 MTR_0543s0010 36.461 373 222 10 12 380 88 449 8.69e-61 202
MS.gene21682.t1 MTR_7g034115 37.867 375 214 8 9 373 10 375 4.06e-58 194
MS.gene21682.t1 MTR_7g033915 35.038 391 210 12 3 380 5 364 8.22e-58 192
MS.gene21682.t1 MTR_0492s0020 36.207 348 209 9 12 357 88 424 1.35e-55 189
MS.gene21682.t1 MTR_7g088260 34.726 383 224 12 12 381 93 462 3.95e-55 188
MS.gene21682.t1 MTR_7g098510 35.584 385 230 9 7 381 15 391 2.05e-54 184
MS.gene21682.t1 MTR_3g105060 34.772 394 214 14 3 381 8 373 9.07e-53 179
MS.gene21682.t1 MTR_3g082890 34.177 395 226 12 12 381 99 484 9.21e-53 182
MS.gene21682.t1 MTR_7g033990 35.659 387 210 15 7 373 8 375 2.46e-52 180
MS.gene21682.t1 MTR_3g108560 35.309 388 227 12 4 380 14 388 4.77e-50 173
MS.gene21682.t1 MTR_3g082890 31.944 432 223 13 12 381 19 441 9.95e-49 171
MS.gene21682.t1 MTR_5g008910 37.338 308 136 11 100 385 34 306 1.05e-48 167
MS.gene21682.t1 MTR_3g467400 34.091 396 202 14 12 381 5 367 1.15e-48 169
MS.gene21682.t1 MTR_3g108150 35.309 388 216 12 12 380 15 386 2.18e-48 169
MS.gene21682.t1 MTR_3g036250 33.681 383 212 13 12 378 7 363 1.50e-46 163
MS.gene21682.t1 MTR_7g098480 35.156 384 229 12 7 380 15 388 3.65e-46 165
MS.gene21682.t1 MTR_2g007450 33.017 421 223 15 4 378 10 417 5.23e-45 160
MS.gene21682.t1 MTR_7g056430 32.642 386 218 12 5 375 1 359 8.08e-44 163
MS.gene21682.t1 MTR_6g022500 33.679 386 228 15 12 381 103 476 9.55e-44 158
MS.gene21682.t1 MTR_7g056420 32.642 386 218 12 5 375 1 359 9.96e-44 162
MS.gene21682.t1 MTR_1g066830 32.331 399 230 15 6 380 4 386 3.28e-43 155
MS.gene21682.t1 MTR_3g023630 31.635 373 238 10 12 378 10 371 3.03e-42 152
MS.gene21682.t1 MTR_3g107100 34.165 401 218 17 12 381 13 398 8.89e-42 151
MS.gene21682.t1 MTR_3g107160 31.362 389 233 12 11 381 11 383 3.58e-41 149
MS.gene21682.t1 MTR_3g040700 33.815 346 192 13 12 343 45 367 7.87e-41 149
MS.gene21682.t1 MTR_7g098570 33.419 389 231 14 2 376 14 388 9.93e-41 150
MS.gene21682.t1 MTR_3g107120 31.888 392 230 12 11 378 10 388 2.30e-40 147
MS.gene21682.t1 MTR_7g007080 32.642 386 226 14 12 378 6 376 2.72e-40 147
MS.gene21682.t1 MTR_1089s0010 32.041 387 229 15 12 381 10 379 3.04e-40 147
MS.gene21682.t1 MTR_6g040270 33.419 389 219 17 11 378 9 378 8.46e-40 145
MS.gene21682.t1 MTR_7g055943 33.838 396 234 14 7 383 37 423 1.95e-39 145
MS.gene21682.t1 MTR_7g114710 32.316 393 217 13 3 381 7 364 4.99e-39 143
MS.gene21682.t1 MTR_5g058100 33.417 398 227 15 7 383 6 386 1.35e-38 142
MS.gene21682.t1 MTR_5g039450 31.298 393 213 13 5 378 1 355 1.54e-38 142
MS.gene21682.t1 MTR_1g085120 32.316 393 226 15 15 383 97 473 1.61e-38 144
MS.gene21682.t1 MTR_5g013500 33.427 356 198 15 45 381 30 365 2.02e-38 141
MS.gene21682.t1 MTR_7g056277 31.877 389 223 12 12 380 261 627 3.24e-38 145
MS.gene21682.t1 MTR_1g085120 32.997 397 218 17 15 383 172 548 4.21e-38 144
MS.gene21682.t1 MTR_5g073420 30.513 390 239 12 6 380 7 379 5.33e-38 140
MS.gene21682.t1 MTR_5g039490 32.000 400 218 16 2 380 9 375 7.39e-38 140
MS.gene21682.t1 MTR_7g056287 30.848 389 227 12 12 380 5 371 1.88e-37 139
MS.gene21682.t1 MTR_2g005990 32.297 418 213 15 5 378 1 392 4.75e-37 138
MS.gene21682.t1 MTR_7g034120 34.969 326 176 12 73 381 2 308 1.29e-36 135
MS.gene21682.t1 MTR_6g045333 33.000 400 230 17 7 380 58 445 1.81e-36 138
MS.gene21682.t1 MTR_5g045170 31.738 397 235 15 3 378 7 388 9.14e-36 135
MS.gene21682.t1 MTR_5g058000 34.190 389 210 17 15 382 13 376 2.18e-35 134
MS.gene21682.t1 MTR_1g107385 32.178 404 220 15 12 378 34 420 5.56e-35 133
MS.gene21682.t1 MTR_7g026500 28.993 407 243 13 2 380 6 394 7.87e-35 132
MS.gene21682.t1 MTR_7g075820 30.326 399 231 11 12 378 8 391 1.54e-34 132
MS.gene21682.t1 MTR_7g056447 41.808 177 97 4 12 184 11 185 2.81e-34 129
MS.gene21682.t1 MTR_6g011460 32.741 394 235 14 7 383 43 423 3.00e-34 131
MS.gene21682.t1 MTR_5g083890 33.333 408 213 17 5 370 1 391 7.42e-34 132
MS.gene21682.t1 MTR_5g007410 29.873 395 252 12 2 378 18 405 1.59e-33 130
MS.gene21682.t1 MTR_6g044572 33.413 416 200 19 12 381 4 388 3.18e-33 128
MS.gene21682.t1 MTR_7g083740 29.949 394 225 15 2 380 9 366 6.43e-33 127
MS.gene21682.t1 MTR_5g039470 30.973 339 204 13 26 346 1 327 1.65e-32 125
MS.gene21682.t1 MTR_2g007400 30.751 426 217 19 2 378 4 400 1.70e-32 126
MS.gene21682.t1 MTR_7g034110 32.113 355 176 13 9 351 10 311 4.35e-32 124
MS.gene21682.t1 MTR_6g044560 33.017 421 205 19 7 381 175 564 6.05e-32 127
MS.gene21682.t1 MTR_3g087260 35.714 280 169 8 108 380 181 456 7.24e-32 125
MS.gene21682.t1 MTR_3g087260 34.434 212 110 5 12 214 14 205 2.98e-19 89.4
MS.gene21682.t1 MTR_8g085430 39.000 200 105 5 9 195 10 205 2.15e-31 122
MS.gene21682.t1 MTR_8g085430 42.574 101 52 2 275 369 216 316 7.64e-14 72.4
MS.gene21682.t1 MTR_2g008320 29.268 410 234 14 2 381 44 427 3.10e-31 123
MS.gene21682.t1 MTR_3g099830 30.612 392 223 14 7 378 9 371 3.63e-31 122
MS.gene21682.t1 MTR_1g108820 31.818 396 225 17 9 378 7 383 3.86e-31 122
MS.gene21682.t1 MTR_2g008310 30.534 393 225 14 12 381 4 371 5.82e-31 122
MS.gene21682.t1 MTR_7g056020 30.585 376 222 12 12 374 18 367 6.36e-31 124
MS.gene21682.t1 MTR_3g071850 30.886 395 239 13 7 377 21 405 2.01e-30 123
MS.gene21682.t1 MTR_1g053025 29.620 395 238 14 12 378 4 386 9.09e-30 118
MS.gene21682.t1 MTR_8g077460 29.695 394 223 16 12 381 12 375 2.96e-29 117
MS.gene21682.t1 MTR_4g039440 30.000 390 250 11 9 383 33 414 3.16e-29 117
MS.gene21682.t1 MTR_2g007360 29.925 401 214 14 7 378 9 371 3.60e-29 117
MS.gene21682.t1 MTR_2g036470 30.886 395 236 16 10 380 14 395 4.50e-29 117
MS.gene21682.t1 MTR_7g007340 30.628 382 208 14 9 375 12 351 7.20e-29 115
MS.gene21682.t1 MTR_3g108560 32.886 298 179 10 4 292 14 299 8.06e-29 114
MS.gene21682.t1 MTR_6g022360 31.620 389 226 15 9 380 42 407 8.88e-29 116
MS.gene21682.t1 MTR_1g108800 33.247 388 186 18 9 378 7 339 8.91e-29 115
MS.gene21682.t1 MTR_5g045510 28.462 390 238 11 4 378 6 369 1.31e-28 115
MS.gene21682.t1 MTR_2g020180 35.931 231 117 7 154 381 13 215 1.32e-28 111
MS.gene21682.t1 MTR_3g109982 35.793 271 159 10 124 384 218 483 3.94e-28 116
MS.gene21682.t1 MTR_3g109982 38.251 183 103 4 12 189 15 192 2.43e-21 96.7
MS.gene21682.t1 MTR_5g012840 30.685 365 177 16 34 381 13 318 6.37e-28 112
MS.gene21682.t1 MTR_7g060470 28.856 402 228 15 12 374 5 387 7.20e-28 113
MS.gene21682.t1 MTR_3g026920 28.883 412 212 17 15 378 24 402 7.69e-28 113
MS.gene21682.t1 MTR_2g007550 28.645 391 181 13 12 378 16 332 1.31e-27 112
MS.gene21682.t1 MTR_2g007500 30.925 346 190 13 7 327 11 332 3.46e-27 110
MS.gene21682.t1 MTR_0009s0080 31.250 368 206 16 11 350 19 367 8.53e-27 110
MS.gene21682.t1 MTR_2g083840 29.111 450 244 14 2 381 13 457 4.42e-26 109
MS.gene21682.t1 MTR_8g014260 27.477 444 238 17 12 381 18 451 4.38e-25 106
MS.gene21682.t1 MTR_7g081290 41.497 147 71 5 242 381 118 256 1.79e-24 101
MS.gene21682.t1 MTR_7g081290 41.584 101 45 2 2 97 5 96 3.14e-14 72.4
MS.gene21682.t1 MTR_5g063950 26.913 379 236 12 12 378 10 359 1.96e-24 103
MS.gene21682.t1 MTR_4g098590 27.551 392 218 17 16 365 5 372 2.07e-24 103
MS.gene21682.t1 MTR_4g080610 29.091 385 215 15 12 380 14 356 4.26e-24 102
MS.gene21682.t1 MTR_8g058970 27.115 461 235 18 15 381 24 477 1.12e-23 102
MS.gene21682.t1 MTR_4g134150 32.759 232 135 7 12 239 16 230 1.16e-23 98.6
MS.gene21682.t1 MTR_1g085120 32.558 301 162 13 15 290 184 468 3.17e-23 101
MS.gene21682.t1 MTR_8g062310 25.768 423 246 17 9 381 24 428 2.34e-22 98.6
MS.gene21682.t1 MTR_8g014160 27.110 391 256 12 12 381 43 425 5.28e-22 97.4
MS.gene21682.t1 MTR_7g021990 26.343 391 256 14 12 381 50 429 6.20e-22 97.1
MS.gene21682.t1 MTR_7g033945 36.257 171 96 4 3 163 5 172 7.86e-22 92.0
MS.gene21682.t1 MTR_5g073340 29.940 334 187 12 1 320 1 301 1.43e-21 94.4
MS.gene21682.t1 MTR_7g021950 26.221 389 259 13 12 381 50 429 1.54e-21 96.7
MS.gene21682.t1 MTR_3g110010 38.251 183 103 4 12 189 15 192 3.41e-21 95.9
MS.gene21682.t1 MTR_5g031970 28.906 384 214 14 9 378 15 353 9.65e-21 92.8
MS.gene21682.t1 MTR_1g108820 31.475 305 173 13 9 290 7 298 1.79e-20 92.0
MS.gene21682.t1 MTR_5g061680 28.616 318 186 10 9 318 10 294 3.80e-20 90.5
MS.gene21682.t1 MTR_2g007090 32.203 236 128 8 150 380 85 293 4.55e-20 89.7
MS.gene21682.t1 MTR_6g022520 33.803 284 166 11 113 383 41 315 2.09e-19 88.6
MS.gene21682.t1 MTR_3g115430 43.089 123 59 4 261 381 12 125 2.27e-19 83.6
MS.gene21682.t1 MTR_8g070950 36.224 196 95 8 12 189 17 200 2.67e-18 86.7
MS.gene21682.t1 MTR_7g007370 27.835 388 203 14 3 377 10 333 3.09e-18 85.5
MS.gene21682.t1 MTR_5g065100 27.577 388 229 13 4 380 2 348 3.49e-18 86.3
MS.gene21682.t1 MTR_3g107940 42.063 126 64 4 249 373 88 205 3.89e-18 85.1
MS.gene21682.t1 MTR_5g084070 27.901 405 207 16 9 350 12 394 4.28e-18 85.9
MS.gene21682.t1 MTR_8g062080 37.500 192 94 8 15 188 28 211 5.76e-18 85.5
MS.gene21682.t1 MTR_3g114200 36.170 141 80 5 12 146 21 157 6.44e-18 80.5
MS.gene21682.t1 MTR_7g033940 41.441 111 62 2 9 118 93 201 1.01e-17 81.6
MS.gene21682.t1 MTR_5g073370 28.032 371 205 18 12 350 7 347 1.25e-17 84.0
MS.gene21682.t1 MTR_5g080710 28.571 448 224 19 9 383 32 456 2.11e-17 84.0
MS.gene21682.t1 MTR_8g469020 33.019 212 109 9 6 187 3 211 1.77e-16 81.3
MS.gene21682.t1 MTR_6g029350 31.319 182 107 6 204 378 25 195 2.45e-16 78.2
MS.gene21682.t1 MTR_7g022105 25.556 360 243 11 5 350 45 393 2.52e-16 80.5
MS.gene21682.t1 MTR_8g468760 26.291 426 245 17 9 380 8 418 2.72e-16 80.5
MS.gene21682.t1 MTR_1g043170 45.349 86 42 2 298 381 6 88 1.31e-15 72.0
MS.gene21682.t1 MTR_8g058965 36.715 207 100 12 9 187 12 215 1.72e-15 78.2
MS.gene21682.t1 MTR_4g050250 32.195 205 110 7 12 187 23 227 2.27e-15 77.8
MS.gene21682.t1 MTR_8g468810 32.124 193 113 8 12 188 27 217 2.35e-15 76.6
MS.gene21682.t1 MTR_8g468810 32.124 193 113 8 12 188 27 217 2.94e-15 76.6
MS.gene21682.t1 MTR_8g468810 32.124 193 113 8 12 188 27 217 3.13e-15 76.6
MS.gene21682.t1 MTR_3g095600 24.798 371 189 13 9 371 3 291 3.51e-15 75.9
MS.gene21682.t1 MTR_8g468810 32.124 193 113 8 12 188 27 217 5.08e-15 76.3
MS.gene21682.t1 MTR_8g062010 32.620 187 112 7 12 187 11 194 5.80e-15 76.3
MS.gene21682.t1 MTR_1g038710 27.805 410 212 18 17 350 26 427 6.15e-15 76.3
MS.gene21682.t1 MTR_8g468810 32.124 193 113 8 12 188 27 217 6.51e-15 76.3
MS.gene21682.t1 MTR_3g108140 46.512 86 44 1 297 380 62 147 1.04e-14 72.0
MS.gene21682.t1 MTR_8g445780 26.692 266 162 10 12 258 15 266 1.25e-14 75.1
MS.gene21682.t1 MTR_5g061410 29.293 297 166 13 7 290 2 267 1.63e-14 73.6
MS.gene21682.t1 MTR_4g080787 31.633 196 115 5 12 188 21 216 9.92e-14 72.8
MS.gene21682.t1 MTR_3g048290 29.208 202 124 5 2 189 15 211 1.02e-13 72.8
MS.gene21682.t1 MTR_1g095750 46.377 69 36 1 1 69 38 105 1.11e-13 68.2
MS.gene21682.t1 MTR_5g060570 31.953 169 94 5 12 168 19 178 1.35e-13 70.5
MS.gene21682.t1 MTR_2g100590 32.323 198 108 9 9 186 41 232 9.36e-13 70.1
MS.gene21682.t1 MTR_8g062270 23.789 454 249 15 9 380 15 453 9.61e-13 69.7
MS.gene21682.t1 MTR_2g100590 32.323 198 108 9 9 186 41 232 1.06e-12 69.3
MS.gene21682.t1 MTR_2g100590 32.323 198 108 9 9 186 41 232 1.31e-12 69.3
MS.gene21682.t1 MTR_3g113782 57.778 45 19 0 12 56 19 63 2.48e-12 62.8
MS.gene21682.t1 MTR_8g467800 26.038 265 170 5 12 260 22 276 2.58e-12 67.8
MS.gene21682.t1 MTR_8g467800 26.038 265 170 5 12 260 22 276 6.29e-12 67.0
MS.gene21682.t1 MTR_5g054920 31.694 183 104 7 177 350 7 177 6.47e-12 64.3
MS.gene21682.t1 MTR_7g056280 27.442 215 131 9 177 378 368 570 6.81e-12 67.4
MS.gene21682.t1 MTR_2g020170 43.902 82 42 3 12 89 24 105 9.14e-12 62.8
MS.gene21682.t1 MTR_7g098590 36.364 121 73 2 7 123 15 135 1.34e-11 62.0
MS.gene21682.t1 MTR_4g096730 40.506 79 46 1 303 381 12 89 1.61e-11 60.8
MS.gene21682.t1 MTR_7g034090 32.716 162 91 5 12 160 6 162 2.92e-11 65.1
MS.gene21682.t1 MTR_4g032730 33.163 196 102 9 16 188 21 210 8.99e-11 63.5
MS.gene21682.t1 MTR_3g071790 31.973 147 88 4 207 344 59 202 9.41e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21682.t1 AT4G26340 27.358 424 246 14 12 381 4 419 1.12e-27 113
MS.gene21682.t1 AT4G10400 26.087 414 252 10 12 380 4 408 2.54e-27 112
MS.gene21682.t1 AT4G10400 26.087 414 252 10 12 380 4 408 2.54e-27 112
MS.gene21682.t1 AT4G10400 26.087 414 252 10 12 380 4 408 2.54e-27 112
MS.gene21682.t1 AT1G32375 26.218 431 239 17 15 381 7 422 3.24e-24 103
MS.gene21682.t1 AT1G32375 26.218 431 239 17 15 381 7 422 3.24e-24 103
MS.gene21682.t1 AT5G56420 26.540 422 245 16 15 381 11 422 4.45e-23 100
MS.gene21682.t1 AT5G56420 26.540 422 245 16 15 381 11 422 4.45e-23 100
MS.gene21682.t1 AT5G56420 26.540 422 245 16 15 381 11 422 4.45e-23 100
MS.gene21682.t1 AT5G56370 26.279 430 249 14 9 380 1 420 4.26e-22 97.4
MS.gene21682.t1 AT5G56370 26.279 430 249 14 9 380 1 420 4.26e-22 97.4
MS.gene21682.t1 AT5G22670 33.702 181 114 2 11 188 12 189 7.03e-21 94.4
MS.gene21682.t1 AT5G56380 25.280 447 246 15 12 381 4 439 2.47e-20 92.4
MS.gene21682.t1 AT5G56380 25.280 447 246 15 12 381 4 439 2.47e-20 92.4
MS.gene21682.t1 AT5G38590 26.598 391 224 14 12 350 4 383 9.64e-19 87.8
MS.gene21682.t1 AT5G56440 25.968 439 242 16 12 380 4 429 1.24e-18 87.4
MS.gene21682.t1 AT4G14096 33.333 195 116 5 5 189 3 193 1.55e-18 87.4
MS.gene21682.t1 AT4G14096 33.333 195 116 5 5 189 3 193 1.55e-18 87.4
MS.gene21682.t1 AT4G14103 32.479 234 125 8 11 227 9 226 1.89e-18 86.7
MS.gene21682.t1 AT4G14103 32.479 234 125 8 11 227 9 226 1.89e-18 86.7
MS.gene21682.t1 AT4G14103 32.618 233 124 8 12 227 10 226 2.03e-18 87.0
MS.gene21682.t1 AT5G53640 29.412 187 126 3 12 197 24 205 2.29e-18 83.6
MS.gene21682.t1 AT5G53635 33.702 181 115 3 12 188 2 181 2.44e-18 86.7
MS.gene21682.t1 AT4G00315 33.684 190 116 5 15 196 7 194 2.86e-18 86.7
MS.gene21682.t1 AT4G09920 34.463 177 106 5 15 184 7 180 3.10e-18 84.7
MS.gene21682.t1 AT4G09920 34.463 177 106 5 15 184 7 180 3.10e-18 84.7
MS.gene21682.t1 AT4G09920 34.463 177 106 5 15 184 7 180 3.10e-18 84.7
MS.gene21682.t1 AT1G50980 24.798 371 240 9 2 369 24 358 4.04e-18 85.5
MS.gene21682.t1 AT4G09920 34.463 177 106 5 15 184 7 180 4.96e-18 84.3
MS.gene21682.t1 AT4G09920 34.463 177 106 5 15 184 7 180 4.96e-18 84.3
MS.gene21682.t1 AT3G52680 26.862 443 237 19 12 384 23 448 7.44e-18 85.5
MS.gene21682.t1 AT1G55660 32.642 193 120 5 12 196 55 245 7.57e-18 84.7
MS.gene21682.t1 AT3G49030 25.968 439 234 19 12 380 23 440 8.95e-18 85.1
MS.gene21682.t1 AT1G55660 32.642 193 120 5 12 196 55 245 9.85e-18 85.1
MS.gene21682.t1 AT1G16930 31.351 185 113 3 12 188 17 195 1.60e-17 84.3
MS.gene21682.t1 AT1G16930 31.351 185 113 3 12 188 17 195 1.60e-17 84.3
MS.gene21682.t1 AT1G16930 31.351 185 113 3 12 188 17 195 1.60e-17 84.3
MS.gene21682.t1 AT3G50710 24.719 445 239 16 12 381 4 427 6.52e-17 82.4
MS.gene21682.t1 AT5G62970 26.432 454 240 19 12 380 4 448 9.79e-17 82.0
MS.gene21682.t1 AT5G56400 25.858 437 247 16 9 381 32 455 1.10e-16 81.6
MS.gene21682.t1 AT4G00160 26.617 402 221 16 12 352 18 406 1.34e-16 81.6
MS.gene21682.t1 AT3G44810 34.300 207 109 7 7 192 2 202 1.60e-16 81.3
MS.gene21682.t1 AT4G13965 25.404 433 233 18 12 378 12 420 6.10e-16 79.3
MS.gene21682.t1 AT3G44060 30.688 189 115 5 12 188 1 185 7.74e-16 79.0
MS.gene21682.t1 AT5G38590 33.333 183 112 5 12 188 4 182 8.90e-16 77.4
MS.gene21682.t1 AT3G59200 35.751 193 102 7 12 188 9 195 9.56e-16 78.2
MS.gene21682.t1 AT5G22730 28.492 179 123 2 12 186 30 207 1.14e-15 78.2
MS.gene21682.t1 AT1G05080 24.714 437 258 14 7 380 10 438 1.32e-15 78.6
MS.gene21682.t1 AT5G22730 28.492 179 123 2 12 186 30 207 1.34e-15 78.6
MS.gene21682.t1 AT5G22730 28.492 179 123 2 12 186 30 207 1.34e-15 78.6
MS.gene21682.t1 AT1G78760 28.415 183 126 2 15 193 21 202 1.61e-15 78.2
MS.gene21682.t1 AT5G22720 31.183 186 110 5 12 186 25 203 1.75e-15 78.2
MS.gene21682.t1 AT3G59200 35.533 197 97 7 12 188 9 195 1.91e-15 78.2
MS.gene21682.t1 AT3G58860 34.737 190 102 7 15 188 12 195 3.04e-15 77.4
MS.gene21682.t1 AT5G22610 24.113 423 258 16 12 379 20 434 3.64e-15 77.4
MS.gene21682.t1 AT5G41840 32.178 202 107 7 12 188 16 212 3.90e-15 77.4
MS.gene21682.t1 AT3G49030 25.728 412 243 19 12 380 23 414 4.47e-15 76.6
MS.gene21682.t1 AT5G22610 31.122 196 117 6 12 196 20 208 5.27e-15 77.0
MS.gene21682.t1 AT2G42730 23.282 451 261 16 12 382 7 452 5.34e-15 76.6
MS.gene21682.t1 AT1G69630 31.053 190 117 3 9 189 17 201 8.65e-15 75.9
MS.gene21682.t1 AT5G25850 30.319 188 117 3 9 190 19 198 1.32e-14 75.5
MS.gene21682.t1 AT3G59210 34.536 194 103 8 12 188 9 195 1.51e-14 75.5
MS.gene21682.t1 AT3G59210 34.536 194 103 8 12 188 9 195 1.51e-14 75.5
MS.gene21682.t1 AT3G59210 34.536 194 103 8 12 188 9 195 1.51e-14 75.5
MS.gene21682.t1 AT3G59210 34.536 194 103 8 12 188 9 195 1.51e-14 75.5
MS.gene21682.t1 AT3G59210 34.536 194 103 8 12 188 9 195 1.51e-14 75.5
MS.gene21682.t1 AT3G58900 33.854 192 101 8 15 188 7 190 1.78e-14 73.9
MS.gene21682.t1 AT4G13960 32.487 197 101 7 12 188 4 188 2.01e-14 75.1
MS.gene21682.t1 AT4G13960 32.487 197 101 7 12 188 4 188 2.01e-14 75.1
MS.gene21682.t1 AT3G58900 33.854 192 101 8 15 188 7 190 2.15e-14 73.9
MS.gene21682.t1 AT3G58900 33.854 192 101 8 15 188 7 190 2.15e-14 73.9
MS.gene21682.t1 AT3G58900 33.854 192 101 8 15 188 7 190 2.35e-14 74.7
MS.gene21682.t1 AT5G53840 30.049 203 129 6 15 213 23 216 2.83e-14 74.3
MS.gene21682.t1 AT3G59150 34.500 200 113 7 2 186 5 201 3.37e-14 74.3
MS.gene21682.t1 AT4G10410 32.161 199 117 8 24 218 1 185 3.74e-14 72.4
MS.gene21682.t1 AT5G56690 29.744 195 118 5 9 189 1 190 6.26e-14 73.2
MS.gene21682.t1 AT5G44940 26.519 362 219 13 12 350 7 344 6.86e-14 72.8
MS.gene21682.t1 AT5G25860 29.258 229 124 9 2 200 4 224 8.35e-14 73.2
MS.gene21682.t1 AT5G56410 31.500 200 109 7 17 191 10 206 8.37e-14 73.2
MS.gene21682.t1 AT2G26860 28.837 215 132 6 12 215 4 208 8.96e-14 72.8
MS.gene21682.t1 AT2G26860 28.837 215 132 6 12 215 4 208 8.96e-14 72.8
MS.gene21682.t1 AT4G15060 31.746 189 108 6 12 186 28 209 1.07e-13 72.4
MS.gene21682.t1 AT1G66320 29.885 174 119 2 15 186 35 207 1.14e-13 72.8
MS.gene21682.t1 AT4G15060 31.746 189 108 6 12 186 174 355 1.54e-13 72.4
MS.gene21682.t1 AT5G56370 34.225 187 111 6 9 188 1 182 1.64e-13 71.2
MS.gene21682.t1 AT1G66290 30.000 190 117 5 9 191 28 208 2.07e-13 71.6
MS.gene21682.t1 AT1G66310 29.787 188 126 3 15 197 24 210 2.41e-13 71.6
MS.gene21682.t1 AT2G26030 31.461 178 109 6 15 184 9 181 2.78e-13 71.2
MS.gene21682.t1 AT2G26030 31.461 178 109 6 15 184 9 181 2.78e-13 71.2
MS.gene21682.t1 AT2G26030 31.461 178 109 6 15 184 9 181 3.01e-13 71.2
MS.gene21682.t1 AT3G42770 31.282 195 112 5 12 188 1 191 3.10e-13 71.6
MS.gene21682.t1 AT3G59230 33.000 200 101 9 12 186 14 205 5.61e-13 70.5
MS.gene21682.t1 AT1G78750 30.928 194 119 4 9 189 17 208 7.55e-13 70.1
MS.gene21682.t1 AT1G78750 30.928 194 119 4 9 189 17 208 7.55e-13 70.1
MS.gene21682.t1 AT3G58930 30.769 234 127 9 15 224 7 229 8.41e-13 70.1
MS.gene21682.t1 AT3G58930 30.769 234 127 9 15 224 7 229 8.41e-13 70.1
MS.gene21682.t1 AT3G58930 30.769 234 127 9 15 224 7 229 8.41e-13 70.1
MS.gene21682.t1 AT2G04230 24.229 454 238 18 12 381 15 446 1.00e-12 69.7
MS.gene21682.t1 AT5G38392 31.795 195 103 6 15 186 7 194 1.26e-12 67.0
MS.gene21682.t1 AT1G51370 27.684 177 124 1 12 188 21 193 1.71e-12 68.9
MS.gene21682.t1 AT1G51370 27.684 177 124 1 12 188 21 193 2.23e-12 68.2
MS.gene21682.t1 AT1G51370 27.684 177 124 1 12 188 21 193 2.47e-12 68.6
MS.gene21682.t1 AT1G66300 28.409 176 123 2 15 188 34 208 2.55e-12 68.6
MS.gene21682.t1 AT3G44080 33.553 152 75 4 10 143 7 150 3.12e-12 67.8
MS.gene21682.t1 AT4G00320 31.132 212 111 8 2 186 5 208 3.32e-12 68.2
MS.gene21682.t1 AT3G03030 34.266 143 77 4 12 141 4 142 4.07e-12 67.0
MS.gene21682.t1 AT4G27050 21.729 451 267 13 12 380 6 452 4.16e-12 67.8
MS.gene21682.t1 AT4G27050 21.729 451 267 13 12 380 6 452 4.16e-12 67.8
MS.gene21682.t1 AT4G27050 21.729 451 267 13 12 380 6 452 4.16e-12 67.8
MS.gene21682.t1 AT4G27050 21.729 451 267 13 12 380 6 452 4.16e-12 67.8
MS.gene21682.t1 AT4G27050 21.729 451 267 13 12 380 6 452 4.16e-12 67.8
MS.gene21682.t1 AT5G44950 32.620 187 109 7 12 188 6 185 5.01e-12 67.4
MS.gene21682.t1 AT5G38590 28.500 200 127 5 9 196 1 196 5.23e-12 66.2
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 45 246 5.41e-12 67.4
MS.gene21682.t1 AT3G03030 34.266 143 77 4 12 141 4 142 5.50e-12 67.4
MS.gene21682.t1 AT1G26890 31.098 164 97 6 14 170 42 196 5.83e-12 66.6
MS.gene21682.t1 AT1G26890 31.098 164 97 6 14 170 42 196 5.83e-12 66.6
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 45 246 6.58e-12 67.4
MS.gene21682.t1 AT1G80470 28.426 197 127 5 1 188 6 197 6.92e-12 67.0
MS.gene21682.t1 AT5G41830 30.198 202 106 6 12 186 15 208 8.00e-12 67.0
MS.gene21682.t1 AT3G59000 32.955 176 93 7 12 167 4 174 8.42e-12 67.0
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 8 209 9.30e-12 66.6
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 8 209 9.30e-12 66.6
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 8 209 9.30e-12 66.6
MS.gene21682.t1 AT5G22700 29.384 211 132 4 12 214 8 209 9.30e-12 66.6
MS.gene21682.t1 AT3G03040 31.288 163 91 6 15 160 7 165 1.03e-11 66.6
MS.gene21682.t1 AT3G58980 32.704 159 98 5 12 163 4 160 1.06e-11 67.0
MS.gene21682.t1 AT1G26890 30.952 168 100 6 10 170 38 196 1.06e-11 66.2
MS.gene21682.t1 AT1G26890 30.952 168 100 6 10 170 38 196 1.06e-11 66.2
MS.gene21682.t1 AT1G26890 31.098 164 97 6 14 170 42 196 1.25e-11 66.2
MS.gene21682.t1 AT1G78840 28.333 180 120 4 13 189 9 182 1.43e-11 66.2
MS.gene21682.t1 AT1G78840 28.333 180 120 4 13 189 9 182 1.43e-11 66.2
MS.gene21682.t1 AT3G58940 31.863 204 98 8 15 188 7 199 1.45e-11 66.6
MS.gene21682.t1 AT3G58940 31.863 204 98 8 15 188 7 199 1.45e-11 66.6
MS.gene21682.t1 AT3G59250 35.326 184 83 7 12 189 9 162 1.48e-11 65.9
MS.gene21682.t1 AT5G27750 28.440 218 131 7 12 210 7 218 1.66e-11 65.9
MS.gene21682.t1 AT3G58880 29.744 195 118 5 9 188 2 192 1.80e-11 65.9
MS.gene21682.t1 AT5G27750 28.440 218 131 7 12 210 7 218 2.17e-11 65.1
MS.gene21682.t1 AT5G38570 24.069 403 247 15 9 380 1 375 2.83e-11 65.1
MS.gene21682.t1 AT2G29930 29.717 212 134 6 12 218 14 215 2.95e-11 65.1
MS.gene21682.t1 AT2G29930 29.717 212 134 6 12 218 14 215 2.95e-11 65.1
MS.gene21682.t1 AT1G13780 28.293 205 123 6 1 186 1 200 2.99e-11 64.7
MS.gene21682.t1 AT1G13780 28.293 205 123 6 1 186 1 200 3.12e-11 65.1
MS.gene21682.t1 AT1G60400 27.320 194 126 4 3 186 7 195 3.16e-11 65.1
MS.gene21682.t1 AT3G26922 29.279 222 122 9 12 218 16 217 3.72e-11 63.9
MS.gene21682.t1 AT3G26922 29.279 222 122 9 12 218 16 217 3.72e-11 63.9
MS.gene21682.t1 AT5G22660 32.039 206 129 6 12 213 15 213 4.47e-11 63.9
MS.gene21682.t1 AT5G44490 27.322 183 117 4 17 188 24 201 4.86e-11 64.7
MS.gene21682.t1 AT5G22660 32.039 206 129 6 12 213 15 213 5.08e-11 64.3
MS.gene21682.t1 AT5G38390 32.065 184 98 9 15 186 7 175 5.24e-11 64.3
MS.gene21682.t1 AT3G49150 32.530 166 92 6 12 163 18 177 5.32e-11 64.3
MS.gene21682.t1 AT3G44090 28.141 199 109 7 9 186 23 208 6.12e-11 64.3
MS.gene21682.t1 AT3G59190 32.990 194 105 7 12 186 14 201 6.89e-11 63.9
MS.gene21682.t1 AT2G42720 30.493 223 131 8 12 220 4 216 6.91e-11 63.9
MS.gene21682.t1 AT5G44490 27.322 183 117 4 17 188 24 201 7.23e-11 63.9
MS.gene21682.t1 AT5G38386 33.058 121 66 3 15 124 7 123 7.64e-11 63.5
MS.gene21682.t1 AT5G38386 33.058 121 66 3 15 124 7 123 7.64e-11 63.5
MS.gene21682.t1 AT3G56780 30.601 183 111 7 1 175 1 175 7.81e-11 63.9
MS.gene21682.t1 AT1G64540 29.048 210 125 8 12 214 7 199 9.22e-11 63.5
MS.gene21682.t1 AT1G64540 29.048 210 125 8 12 214 7 199 9.22e-11 63.5
MS.gene21682.t1 AT3G56780 30.601 183 111 7 1 175 1 175 9.96e-11 63.5
MS.gene21682.t1 AT3G59190 32.990 194 105 7 12 186 14 201 9.99e-11 63.5

Find 76 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAATAGTGTAGAGCTAAA+AGG 0.261631 5.2:+2701867 MS.gene21682:CDS
GAGAAATGAGATGACGAAAT+TGG 0.262819 5.2:-2701751 None:intergenic
ACTAAAACAAACCTTGTAAA+TGG 0.281061 5.2:-2702527 None:intergenic
CAAGCTAGGCAATGTTGTTT+TGG 0.283081 5.2:+2701971 MS.gene21682:CDS
TTCAAGTGTGTAGATGAAAT+TGG 0.291131 5.2:+2702625 MS.gene21682:CDS
GTTTCACAATCTAATCGATT+TGG 0.313553 5.2:+2702414 MS.gene21682:CDS
GATTGGACGTGGACAGAGTT+TGG 0.371999 5.2:-2701780 None:intergenic
TAAATCTAAATATTCGAGAT+TGG 0.383007 5.2:-2702096 None:intergenic
AACTTTCTCTTTGTGTCCAA+GGG 0.384660 5.2:+2702843 MS.gene21682:CDS
ATTTGGTCCGAAAGAGTATT+CGG 0.385493 5.2:-2701908 None:intergenic
GTAGAAGCCACTAGGCAATT+TGG 0.390797 5.2:-2701925 None:intergenic
AAAATTAGAGATTTGAGTAA+TGG 0.399423 5.2:-2702017 None:intergenic
TTGATCTCCGAATACTCTTT+CGG 0.412373 5.2:+2701901 MS.gene21682:CDS
TGTAGAGCTAAAAGGTGTTC+CGG 0.420288 5.2:+2701875 MS.gene21682:CDS
TTGGAAAACTTGCGGAAGTC+AGG 0.424094 5.2:-2701732 None:intergenic
ACGTGACACCGAACATCGTC+AGG 0.425087 5.2:-2701600 None:intergenic
GTAGCAGCAGCATCTCTTGT+TGG 0.438312 5.2:-2701636 None:intergenic
AAACTTTCTCTTTGTGTCCA+AGG 0.438889 5.2:+2702842 MS.gene21682:CDS
AAATCTAAATATTCGAGATT+GGG 0.441281 5.2:-2702095 None:intergenic
GCTGCAACGTCATGTGGAAC+TGG 0.441665 5.2:+2702461 MS.gene21682:CDS
AGACATTCTGAATCAATTTG+TGG 0.447260 5.2:-2702667 None:intergenic
AATTCTTGCTCTGACCAACT+TGG 0.457551 5.2:-2702186 None:intergenic
TGCAGCAGTTTCCCCACGCA+AGG 0.466788 5.2:-2702444 None:intergenic
CAAAGAGATGGAAACCACTT+TGG 0.467642 5.2:+2701670 MS.gene21682:CDS
AACAACATTGCCTAGCTTGA+GGG 0.472102 5.2:-2701967 None:intergenic
ATGAAATTGGCAAAGAGCAT+TGG 0.482176 5.2:+2702638 MS.gene21682:CDS
CACTCCTCCACAAGTGGAAG+AGG 0.490349 5.2:+2702148 MS.gene21682:CDS
CAAAGTGAAGATTACATGTC+CGG 0.491200 5.2:-2702901 None:intergenic
TGCTCTGACCAACTTGGGTA+AGG 0.494639 5.2:-2702180 None:intergenic
AAAGAGAAAGTTTCCAACAT+TGG 0.508998 5.2:-2702832 None:intergenic
AAGTTGGTCAGAGCAAGAAT+TGG 0.512047 5.2:+2702188 MS.gene21682:CDS
GTTTCCATCTCTTTGACAGA+AGG 0.512119 5.2:-2701662 None:intergenic
TGGTAAGATTCTGAAGTTTG+TGG 0.521115 5.2:-2702507 None:intergenic
AGTATTCGGAGATCAAGTTC+CGG 0.525049 5.2:-2701894 None:intergenic
GGCTAAGTCCTTACCCAAGT+TGG 0.525549 5.2:+2702172 MS.gene21682:CDS
ATTCTTGCTCTGACCAACTT+GGG 0.534857 5.2:-2702185 None:intergenic
TTACATGTCGCAGAGCCCCT+TGG 0.536539 5.2:-2702859 None:intergenic
CAAGCCTTCTGTCAAAGAGA+TGG 0.546099 5.2:+2701658 MS.gene21682:CDS
ATCGATTAGATTGTGAAACA+TGG 0.549767 5.2:-2702410 None:intergenic
ACTCTTGTCACCCTCAAGCT+AGG 0.550595 5.2:+2701957 MS.gene21682:CDS
ATCATCTGGGAAGGATCTGA+AGG 0.553057 5.2:-2701832 None:intergenic
CACAAGAGAGACGTAAGGAT+TGG 0.555200 5.2:-2701797 None:intergenic
TTTGGACGTTACCCTTGCGT+GGG 0.557590 5.2:+2702432 MS.gene21682:CDS
AAACAACATTGCCTAGCTTG+AGG 0.558435 5.2:-2701968 None:intergenic
TCAGAATCTTACCATTTACA+AGG 0.560115 5.2:+2702516 MS.gene21682:CDS
ACTTCACTTCGACTTACAGC+CGG 0.569708 5.2:+2702882 MS.gene21682:CDS
CAATCCTTACGTCTCTCTTG+TGG 0.572294 5.2:+2701798 MS.gene21682:CDS
TCGTGACACTCCTCCACAAG+TGG 0.573792 5.2:+2702142 MS.gene21682:CDS
GAGGTCTAAATCATCTGGGA+AGG 0.582712 5.2:-2701841 None:intergenic
ATTTGGACGTTACCCTTGCG+TGG 0.583803 5.2:+2702431 MS.gene21682:CDS
TCGATTAGATTGTGAAACAT+GGG 0.586213 5.2:-2702409 None:intergenic
TGATCTAGAGCATCCAATGT+TGG 0.587015 5.2:+2702819 MS.gene21682:CDS
AAAAGAGGTCTAAATCATCT+GGG 0.589547 5.2:-2701845 None:intergenic
GAAACTGCTGCAACGTCATG+TGG 0.590685 5.2:+2702455 MS.gene21682:CDS
CAGCAGCATCTCTTGTTGGA+AGG 0.592632 5.2:-2701632 None:intergenic
ACTCCTCCACAAGTGGAAGA+GGG 0.597895 5.2:+2702149 MS.gene21682:CDS
CTCCTCCACAAGTGGAAGAG+GGG 0.598628 5.2:+2702150 MS.gene21682:CDS
AGTCAGGAAAGTATCTGTCA+TGG 0.602707 5.2:-2701716 None:intergenic
TTGCAACTGTAGAAGCCACT+AGG 0.605024 5.2:-2701933 None:intergenic
TTACATAGGCTTAAGTTGTG+AGG 0.609254 5.2:+2702723 MS.gene21682:CDS
TCCTCCACAAGTGGAAGAGG+GGG 0.612748 5.2:+2702151 MS.gene21682:CDS
AATTGGCAAAGAGCATTGGA+AGG 0.613867 5.2:+2702642 MS.gene21682:CDS
ACTTTCTCTTTGTGTCCAAG+GGG 0.617041 5.2:+2702844 MS.gene21682:CDS
GCAGCAGTTTCCCCACGCAA+GGG 0.620423 5.2:-2702443 None:intergenic
GAACGGAGCGAGAGCCAAAG+TGG 0.625225 5.2:-2701684 None:intergenic
TGACGAAATTGGAAAACTTG+CGG 0.626144 5.2:-2701740 None:intergenic
GTATCTGTCATGGAAGTCGA+AGG 0.627121 5.2:-2701706 None:intergenic
AGAGCCACAAGAGAGACGTA+AGG 0.634035 5.2:-2701802 None:intergenic
TGTCATGGAAGTCGAAGGAA+CGG 0.638913 5.2:-2701701 None:intergenic
GACGTGGACAGAGTTTGGTG+AGG 0.640859 5.2:-2701775 None:intergenic
ACACTCGATAGTTGAAACAC+AGG 0.645957 5.2:-2701574 None:intergenic
TTTCGGACCAAATTGCCTAG+TGG 0.651639 5.2:+2701918 MS.gene21682:CDS
TTGGACGTTACCCTTGCGTG+GGG 0.667813 5.2:+2702433 MS.gene21682:CDS
AGAGACGTAAGGATTGGACG+TGG 0.675705 5.2:-2701791 None:intergenic
TCGATAGTTGAAACACAGGA+AGG 0.686576 5.2:-2701570 None:intergenic
AATTGTGCATTAGAACACAC+AGG 0.712121 5.2:-2702233 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAGAGATTTGAGTAA+TGG - chr5.2:2702020-2702039 None:intergenic 20.0%
!! AAATCTAAATATTCGAGATT+GGG - chr5.2:2702098-2702117 None:intergenic 20.0%
!! TAAATCTAAATATTCGAGAT+TGG - chr5.2:2702099-2702118 None:intergenic 20.0%
!! TTTACACTCAAAAATTACAT+AGG + chr5.2:2702709-2702728 MS.gene21682:CDS 20.0%
!!! ATTATGTTCAACTTTTTATG+CGG + chr5.2:2702068-2702087 MS.gene21682:CDS 20.0%
! ACTAAAACAAACCTTGTAAA+TGG - chr5.2:2702530-2702549 None:intergenic 25.0%
! TTTAATAGTGTAGAGCTAAA+AGG + chr5.2:2701867-2701886 MS.gene21682:CDS 25.0%
!! ATTTTGAATGACTTCATCTT+TGG + chr5.2:2702035-2702054 MS.gene21682:CDS 25.0%
AAAAAGAGGTCTAAATCATC+TGG - chr5.2:2701849-2701868 None:intergenic 30.0%
AAAAGAGGTCTAAATCATCT+GGG - chr5.2:2701848-2701867 None:intergenic 30.0%
AAAGAGAAAGTTTCCAACAT+TGG - chr5.2:2702835-2702854 None:intergenic 30.0%
AGACATTCTGAATCAATTTG+TGG - chr5.2:2702670-2702689 None:intergenic 30.0%
ATCGATTAGATTGTGAAACA+TGG - chr5.2:2702413-2702432 None:intergenic 30.0%
GCTCTACACTATTAAAAAAG+AGG - chr5.2:2701863-2701882 None:intergenic 30.0%
GTTTCACAATCTAATCGATT+TGG + chr5.2:2702414-2702433 MS.gene21682:CDS 30.0%
TCAGAATCTTACCATTTACA+AGG + chr5.2:2702516-2702535 MS.gene21682:CDS 30.0%
TCGATTAGATTGTGAAACAT+GGG - chr5.2:2702412-2702431 None:intergenic 30.0%
TTCAAGTGTGTAGATGAAAT+TGG + chr5.2:2702625-2702644 MS.gene21682:CDS 30.0%
AAACTTTCTCTTTGTGTCCA+AGG + chr5.2:2702842-2702861 MS.gene21682:CDS 35.0%
AACTTTCTCTTTGTGTCCAA+GGG + chr5.2:2702843-2702862 MS.gene21682:CDS 35.0%
AATTGTGCATTAGAACACAC+AGG - chr5.2:2702236-2702255 None:intergenic 35.0%
GAGAAATGAGATGACGAAAT+TGG - chr5.2:2701754-2701773 None:intergenic 35.0%
TGACGAAATTGGAAAACTTG+CGG - chr5.2:2701743-2701762 None:intergenic 35.0%
TTGATCTCCGAATACTCTTT+CGG + chr5.2:2701901-2701920 MS.gene21682:CDS 35.0%
! ACAATTTTTGCACGCACAAA+TGG + chr5.2:2702250-2702269 MS.gene21682:CDS 35.0%
! ATGAAATTGGCAAAGAGCAT+TGG + chr5.2:2702638-2702657 MS.gene21682:CDS 35.0%
! TTACATAGGCTTAAGTTGTG+AGG + chr5.2:2702723-2702742 MS.gene21682:CDS 35.0%
!! ATTTGGTCCGAAAGAGTATT+CGG - chr5.2:2701911-2701930 None:intergenic 35.0%
!! TGGTAAGATTCTGAAGTTTG+TGG - chr5.2:2702510-2702529 None:intergenic 35.0%
AAACAACATTGCCTAGCTTG+AGG - chr5.2:2701971-2701990 None:intergenic 40.0%
AACAACATTGCCTAGCTTGA+GGG - chr5.2:2701970-2701989 None:intergenic 40.0%
AATTCTTGCTCTGACCAACT+TGG - chr5.2:2702189-2702208 None:intergenic 40.0%
ACACTCGATAGTTGAAACAC+AGG - chr5.2:2701577-2701596 None:intergenic 40.0%
ACTTTCTCTTTGTGTCCAAG+GGG + chr5.2:2702844-2702863 MS.gene21682:CDS 40.0%
AGTATTCGGAGATCAAGTTC+CGG - chr5.2:2701897-2701916 None:intergenic 40.0%
ATTCTTGCTCTGACCAACTT+GGG - chr5.2:2702188-2702207 None:intergenic 40.0%
CAAAGAGATGGAAACCACTT+TGG + chr5.2:2701670-2701689 MS.gene21682:CDS 40.0%
GTTTCCATCTCTTTGACAGA+AGG - chr5.2:2701665-2701684 None:intergenic 40.0%
TCGATAGTTGAAACACAGGA+AGG - chr5.2:2701573-2701592 None:intergenic 40.0%
! AAGTTGGTCAGAGCAAGAAT+TGG + chr5.2:2702188-2702207 MS.gene21682:CDS 40.0%
! AGTGTTTTCCTGACGATGTT+CGG + chr5.2:2701592-2701611 MS.gene21682:CDS 40.0%
! TGATCTAGAGCATCCAATGT+TGG + chr5.2:2702819-2702838 MS.gene21682:CDS 40.0%
!! AATTGGCAAAGAGCATTGGA+AGG + chr5.2:2702642-2702661 MS.gene21682:CDS 40.0%
!! AGTCAGGAAAGTATCTGTCA+TGG - chr5.2:2701719-2701738 None:intergenic 40.0%
!! CAAGCTAGGCAATGTTGTTT+TGG + chr5.2:2701971-2701990 MS.gene21682:CDS 40.0%
!! TGTAGAGCTAAAAGGTGTTC+CGG + chr5.2:2701875-2701894 MS.gene21682:CDS 40.0%
ACTTCACTTCGACTTACAGC+CGG + chr5.2:2702882-2702901 MS.gene21682:CDS 45.0%
ATCATCTGGGAAGGATCTGA+AGG - chr5.2:2701835-2701854 None:intergenic 45.0%
CAAGCCTTCTGTCAAAGAGA+TGG + chr5.2:2701658-2701677 MS.gene21682:CDS 45.0%
CAATCCTTACGTCTCTCTTG+TGG + chr5.2:2701798-2701817 MS.gene21682:CDS 45.0%
CACAAGAGAGACGTAAGGAT+TGG - chr5.2:2701800-2701819 None:intergenic 45.0%
GAGGTCTAAATCATCTGGGA+AGG - chr5.2:2701844-2701863 None:intergenic 45.0%
GTAGAAGCCACTAGGCAATT+TGG - chr5.2:2701928-2701947 None:intergenic 45.0%
GTATCTGTCATGGAAGTCGA+AGG - chr5.2:2701709-2701728 None:intergenic 45.0%
TGTCATGGAAGTCGAAGGAA+CGG - chr5.2:2701704-2701723 None:intergenic 45.0%
TTGCAACTGTAGAAGCCACT+AGG - chr5.2:2701936-2701955 None:intergenic 45.0%
TTGGAAAACTTGCGGAAGTC+AGG - chr5.2:2701735-2701754 None:intergenic 45.0%
TTTCGGACCAAATTGCCTAG+TGG + chr5.2:2701918-2701937 MS.gene21682:CDS 45.0%
ACTCCTCCACAAGTGGAAGA+GGG + chr5.2:2702149-2702168 MS.gene21682:CDS 50.0%
ACTCTTGTCACCCTCAAGCT+AGG + chr5.2:2701957-2701976 MS.gene21682:CDS 50.0%
AGAGACGTAAGGATTGGACG+TGG - chr5.2:2701794-2701813 None:intergenic 50.0%
AGAGCCACAAGAGAGACGTA+AGG - chr5.2:2701805-2701824 None:intergenic 50.0%
ATTTGGACGTTACCCTTGCG+TGG + chr5.2:2702431-2702450 MS.gene21682:CDS 50.0%
CAGCAGCATCTCTTGTTGGA+AGG - chr5.2:2701635-2701654 None:intergenic 50.0%
GAAACTGCTGCAACGTCATG+TGG + chr5.2:2702455-2702474 MS.gene21682:CDS 50.0%
GATTGGACGTGGACAGAGTT+TGG - chr5.2:2701783-2701802 None:intergenic 50.0%
GGCTAAGTCCTTACCCAAGT+TGG + chr5.2:2702172-2702191 MS.gene21682:CDS 50.0%
GTAGCAGCAGCATCTCTTGT+TGG - chr5.2:2701639-2701658 None:intergenic 50.0%
TGCTCTGACCAACTTGGGTA+AGG - chr5.2:2702183-2702202 None:intergenic 50.0%
TTTGGACGTTACCCTTGCGT+GGG + chr5.2:2702432-2702451 MS.gene21682:CDS 50.0%
ACGTGACACCGAACATCGTC+AGG - chr5.2:2701603-2701622 None:intergenic 55.0%
CACTCCTCCACAAGTGGAAG+AGG + chr5.2:2702148-2702167 MS.gene21682:CDS 55.0%
CTCCTCCACAAGTGGAAGAG+GGG + chr5.2:2702150-2702169 MS.gene21682:CDS 55.0%
GCTGCAACGTCATGTGGAAC+TGG + chr5.2:2702461-2702480 MS.gene21682:CDS 55.0%
TCCTCCACAAGTGGAAGAGG+GGG + chr5.2:2702151-2702170 MS.gene21682:CDS 55.0%
TCGTGACACTCCTCCACAAG+TGG + chr5.2:2702142-2702161 MS.gene21682:CDS 55.0%
TTACATGTCGCAGAGCCCCT+TGG - chr5.2:2702862-2702881 None:intergenic 55.0%
TTAGCCCCCTCTTCCACTTG+TGG - chr5.2:2702158-2702177 None:intergenic 55.0%
TTGGACGTTACCCTTGCGTG+GGG + chr5.2:2702433-2702452 MS.gene21682:CDS 55.0%
! GACGTGGACAGAGTTTGGTG+AGG - chr5.2:2701778-2701797 None:intergenic 55.0%
GAACGGAGCGAGAGCCAAAG+TGG - chr5.2:2701687-2701706 None:intergenic 60.0%
GCAGCAGTTTCCCCACGCAA+GGG - chr5.2:2702446-2702465 None:intergenic 60.0%
TGCAGCAGTTTCCCCACGCA+AGG - chr5.2:2702447-2702466 None:intergenic 60.0%
GCCCCCTCTTCCACTTGTGG+AGG - chr5.2:2702155-2702174 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 2701555 2702912 2701555 ID=MS.gene21682
chr5.2 mRNA 2701555 2702912 2701555 ID=MS.gene21682.t1;Parent=MS.gene21682
chr5.2 exon 2701555 2702271 2701555 ID=MS.gene21682.t1.exon1;Parent=MS.gene21682.t1
chr5.2 CDS 2701555 2702271 2701555 ID=cds.MS.gene21682.t1;Parent=MS.gene21682.t1
chr5.2 exon 2702385 2702537 2702385 ID=MS.gene21682.t1.exon2;Parent=MS.gene21682.t1
chr5.2 CDS 2702385 2702537 2702385 ID=cds.MS.gene21682.t1;Parent=MS.gene21682.t1
chr5.2 exon 2702622 2702912 2702622 ID=MS.gene21682.t1.exon3;Parent=MS.gene21682.t1
chr5.2 CDS 2702622 2702912 2702622 ID=cds.MS.gene21682.t1;Parent=MS.gene21682.t1
Gene Sequence

>MS.gene21682

ATGAAGAAGACGATGCCTTCCTGTGTTTCAACTATCGAGTGTTTTCCTGACGATGTTCGGTGTCACGTTCTCTCATTCCTTCCAACAAGAGATGCTGCTGCTACAAGCCTTCTGTCAAAGAGATGGAAACCACTTTGGCTCTCGCTCCGTTCCTTCGACTTCCATGACAGATACTTTCCTGACTTCCGCAAGTTTTCCAATTTCGTCATCTCATTTCTCTCCTCACCAAACTCTGTCCACGTCCAATCCTTACGTCTCTCTTGTGGCTCTGATGTTACCTTCAGATCCTTCCCAGATGATTTAGACCTCTTTTTTAATAGTGTAGAGCTAAAAGGTGTTCCGGAACTTGATCTCCGAATACTCTTTCGGACCAAATTGCCTAGTGGCTTCTACAGTTGCAAGACTCTTGTCACCCTCAAGCTAGGCAATGTTGTTTTGGATTACTACTCTTGTGTTGATTTTCCATTACTCAAATCTCTAATTTTGAATGACTTCATCTTTGGAACTCAAGCTATTATGTTCAACTTTTTATGCGGATGTCCCAATCTCGAATATTTAGATTTAGATGCAAGATCAGTAAAAATTGATCGTGACACTCCTCCACAAGTGGAAGAGGGGGCTAAGTCCTTACCCAAGTTGGTCAGAGCAAGAATTGGTTATTGCAACTATATTCTGTTTCCTGTGTGTTCTAATGCACAATTTTTGCACGCACAAATGGTATACAATGTTTCTCTAATGTTAACAACTTGTTTTTATTTCTTTATCAAAAAATTTCATTACTTTTTCTCATTATTTTTAGTAACAATTATTTGTTTCTTTCATGTCTATAGAACGTTAATGATTGTGTCTACAATCCCATGTTTCACAATCTAATCGATTTGGACGTTACCCTTGCGTGGGGAAACTGCTGCAACGTCATGTGGAACTGGTTTTCACAAGTGCTGCACAATTGCCACAAACTTCAGAATCTTACCATTTACAAGGTTTGTTTTAGTTCGACTTCTATTTTAAACTCTACGTGTTTCATTTTATTTTTTTGACAAATGAAAATTTACATATTGTAACAGAATTTCAAGTGTGTAGATGAAATTGGCAAAGAGCATTGGAAGGATCCACAAATTGATTCAGAATGTCTTTCAACACAGCTTAGAACATTTACACTCAAAAATTACATAGGCTTAAGTTGTGAGGCTCAATTTGCTAAATACATTATGCAGAAGTCAAAAGTACTACAAAATATGACAATTCAGAGTGCTTTAAACATTGATCTAGAGCATCCAATGTTGGAAACTTTCTCTTTGTGTCCAAGGGGCTCTGCGACATGTAAACTTCACTTCGACTTACAGCCGGACATGTAA

Protein sequence

>MS.gene21682.t1

MKKTMPSCVSTIECFPDDVRCHVLSFLPTRDAAATSLLSKRWKPLWLSLRSFDFHDRYFPDFRKFSNFVISFLSSPNSVHVQSLRLSCGSDVTFRSFPDDLDLFFNSVELKGVPELDLRILFRTKLPSGFYSCKTLVTLKLGNVVLDYYSCVDFPLLKSLILNDFIFGTQAIMFNFLCGCPNLEYLDLDARSVKIDRDTPPQVEEGAKSLPKLVRARIGYCNYILFPVCSNAQFLHAQMNVNDCVYNPMFHNLIDLDVTLAWGNCCNVMWNWFSQVLHNCHKLQNLTIYKNFKCVDEIGKEHWKDPQIDSECLSTQLRTFTLKNYIGLSCEAQFAKYIMQKSKVLQNMTIQSALNIDLEHPMLETFSLCPRGSATCKLHFDLQPDM