AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26069


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26069.t1 MTR_3g107120 70.881 261 70 4 1 259 1 257 3.76e-118 343
MS.gene26069.t1 MTR_3g107140 62.963 189 69 1 28 216 9 196 4.65e-76 229
MS.gene26069.t1 MTR_3g107100 53.053 262 107 4 1 259 1 249 3.57e-74 231
MS.gene26069.t1 MTR_3g107160 50.570 263 112 5 1 259 1 249 3.87e-73 228
MS.gene26069.t1 MTR_4g098590 44.531 256 118 7 13 256 1 244 3.45e-49 166
MS.gene26069.t1 MTR_1g053025 43.191 257 123 7 11 256 2 246 5.02e-48 163
MS.gene26069.t1 MTR_2g007450 42.308 260 113 8 1 235 1 248 9.05e-45 155
MS.gene26069.t1 MTR_2g007500 42.308 260 113 7 5 256 8 238 6.39e-44 151
MS.gene26069.t1 MTR_2g007400 38.783 263 136 6 11 259 12 263 8.26e-41 145
MS.gene26069.t1 MTR_5g083890 38.745 271 127 7 11 257 6 261 1.09e-36 135
MS.gene26069.t1 MTR_1g107385 38.806 268 128 8 11 257 32 284 1.03e-34 129
MS.gene26069.t1 MTR_3g026920 35.531 273 122 8 11 256 19 264 4.10e-32 122
MS.gene26069.t1 MTR_3g023630 40.909 198 96 4 11 203 8 189 2.13e-31 119
MS.gene26069.t1 MTR_3g099830 36.154 260 117 8 11 259 12 233 4.03e-31 119
MS.gene26069.t1 MTR_7g032380 38.914 221 110 7 1 214 1 203 8.74e-31 117
MS.gene26069.t1 MTR_7g034090 48.734 158 61 5 11 163 4 146 1.48e-30 118
MS.gene26069.t1 MTR_1g041245 34.717 265 143 8 1 258 1 242 5.81e-30 115
MS.gene26069.t1 MTR_2g005990 33.846 260 147 6 11 257 6 253 9.53e-30 115
MS.gene26069.t1 MTR_7g075820 33.824 272 142 6 11 259 6 262 1.19e-29 115
MS.gene26069.t1 MTR_2g008310 36.680 259 130 8 11 257 2 238 5.19e-29 113
MS.gene26069.t1 MTR_5g073420 35.294 255 131 9 11 257 11 239 1.17e-28 112
MS.gene26069.t1 MTR_7g098570 36.842 266 134 10 1 256 7 248 1.77e-28 113
MS.gene26069.t1 MTR_7g098510 36.900 271 120 10 4 256 9 246 2.14e-28 111
MS.gene26069.t1 MTR_3g040700 39.252 214 105 6 2 207 34 230 8.31e-28 110
MS.gene26069.t1 MTR_3g108150 35.317 252 133 6 11 257 13 239 1.02e-27 109
MS.gene26069.t1 MTR_2g008320 35.271 258 139 7 11 257 52 292 2.00e-27 109
MS.gene26069.t1 MTR_7g007340 34.921 252 116 8 11 257 13 221 1.97e-26 106
MS.gene26069.t1 MTR_8g085430 34.661 251 133 8 1 237 1 234 3.90e-26 104
MS.gene26069.t1 MTR_7g056447 38.498 213 102 7 5 209 3 194 6.92e-26 103
MS.gene26069.t1 MTR_2g007360 35.385 260 110 10 11 257 12 226 5.13e-25 102
MS.gene26069.t1 MTR_3g036250 38.164 207 103 5 9 207 3 192 7.42e-25 101
MS.gene26069.t1 MTR_7g056433 40.476 210 96 8 6 205 7 197 7.57e-25 102
MS.gene26069.t1 MTR_3g105060 35.025 197 112 5 11 205 14 196 1.10e-24 101
MS.gene26069.t1 MTR_7g026500 35.907 259 128 12 10 255 13 246 1.44e-24 101
MS.gene26069.t1 MTR_5g045510 33.603 247 141 7 11 255 12 237 1.72e-24 100
MS.gene26069.t1 MTR_7g098480 34.962 266 133 9 4 257 9 246 1.97e-24 101
MS.gene26069.t1 MTR_5g061680 37.619 210 100 7 11 209 11 200 1.16e-23 97.8
MS.gene26069.t1 MTR_6g011460 35.931 231 123 8 11 235 46 257 2.94e-23 98.2
MS.gene26069.t1 MTR_5g045170 32.932 249 138 6 13 255 16 241 4.02e-23 97.4
MS.gene26069.t1 MTR_7g114710 38.095 210 107 7 2 205 4 196 4.38e-23 97.1
MS.gene26069.t1 MTR_1g085120 35.371 229 132 9 11 235 92 308 7.27e-23 97.4
MS.gene26069.t1 MTR_7g115270 36.019 211 104 6 11 207 12 205 1.00e-22 96.3
MS.gene26069.t1 MTR_1g085120 35.371 229 132 9 11 235 179 395 1.40e-22 96.3
MS.gene26069.t1 MTR_1g085120 35.371 229 132 9 11 235 167 383 1.51e-22 96.7
MS.gene26069.t1 MTR_4g134150 34.146 205 106 8 11 210 14 194 1.60e-22 92.8
MS.gene26069.t1 MTR_3g450920 41.520 171 84 4 68 235 60 217 2.21e-22 92.4
MS.gene26069.t1 MTR_7g032370 37.433 187 101 5 23 207 2 174 2.61e-22 94.7
MS.gene26069.t1 MTR_3g082890 33.182 220 113 6 1 206 81 280 4.51e-22 95.1
MS.gene26069.t1 MTR_7g088260 33.468 248 133 7 11 253 91 311 4.97e-22 94.7
MS.gene26069.t1 MTR_3g082890 33.182 220 113 6 1 206 1 200 5.19e-22 94.7
MS.gene26069.t1 MTR_1g108820 33.333 255 143 8 11 257 8 243 6.33e-22 94.0
MS.gene26069.t1 MTR_7g083740 32.599 227 118 6 1 225 7 200 7.86e-22 93.6
MS.gene26069.t1 MTR_7g056430 37.674 215 81 8 5 212 3 171 8.51e-22 94.7
MS.gene26069.t1 MTR_5g008920 32.296 257 148 9 6 258 7 241 8.52e-22 93.6
MS.gene26069.t1 MTR_7g056420 37.674 215 81 8 5 212 3 171 1.01e-21 94.7
MS.gene26069.t1 MTR_0492s0020 34.211 228 121 7 11 235 86 287 1.18e-21 93.6
MS.gene26069.t1 MTR_0543s0010 34.211 228 121 7 11 235 86 287 1.26e-21 93.6
MS.gene26069.t1 MTR_1g108820 33.333 255 143 8 11 257 8 243 1.96e-21 92.0
MS.gene26069.t1 MTR_3g110010 36.893 206 106 6 3 202 2 189 3.95e-21 92.8
MS.gene26069.t1 MTR_3g109982 36.715 207 107 6 3 203 2 190 4.21e-21 92.8
MS.gene26069.t1 MTR_2g007530 38.043 184 74 5 11 164 19 192 6.64e-21 90.5
MS.gene26069.t1 MTR_8g058970 35.909 220 109 9 9 204 17 228 9.75e-21 91.3
MS.gene26069.t1 MTR_3g087260 34.434 212 101 6 1 207 1 179 1.26e-20 90.9
MS.gene26069.t1 MTR_7g007080 31.349 252 154 6 11 256 4 242 1.36e-20 90.1
MS.gene26069.t1 MTR_3g108560 37.879 198 92 9 11 202 20 192 2.18e-20 88.6
MS.gene26069.t1 MTR_8g468810 32.841 271 145 12 11 256 25 283 2.21e-20 89.0
MS.gene26069.t1 MTR_8g468810 32.841 271 145 12 11 256 25 283 2.31e-20 89.0
MS.gene26069.t1 MTR_8g468810 32.841 271 145 12 11 256 25 283 2.73e-20 89.0
MS.gene26069.t1 MTR_5g008950 33.333 246 136 8 13 254 1 222 3.13e-20 89.0
MS.gene26069.t1 MTR_5g073370 34.826 201 111 5 8 202 2 188 3.43e-20 89.0
MS.gene26069.t1 MTR_4g039440 34.921 252 136 9 11 255 34 264 3.48e-20 89.4
MS.gene26069.t1 MTR_6g045333 32.129 249 153 8 9 255 59 293 4.24e-20 89.4
MS.gene26069.t1 MTR_3g108560 36.946 203 97 8 11 207 20 197 4.32e-20 89.0
MS.gene26069.t1 MTR_8g468810 32.841 271 145 12 11 256 25 283 4.54e-20 88.6
MS.gene26069.t1 MTR_7g055943 35.776 232 125 6 11 235 40 254 4.82e-20 89.0
MS.gene26069.t1 MTR_5g058100 34.000 250 141 9 11 255 9 239 5.35e-20 88.6
MS.gene26069.t1 MTR_7g034110 33.486 218 118 8 1 209 1 200 6.75e-20 87.8
MS.gene26069.t1 MTR_5g073340 31.452 248 129 6 11 257 8 215 7.07e-20 87.4
MS.gene26069.t1 MTR_7g056287 36.139 202 110 6 11 207 3 190 7.45e-20 87.8
MS.gene26069.t1 MTR_8g014160 35.238 210 109 8 9 203 39 236 8.40e-20 88.2
MS.gene26069.t1 MTR_8g468810 32.222 270 148 11 11 256 25 283 9.08e-20 88.2
MS.gene26069.t1 MTR_7g075800 29.329 283 148 12 11 259 9 273 9.92e-20 88.6
MS.gene26069.t1 MTR_5g084070 35.211 213 115 7 1 209 1 194 1.23e-19 87.8
MS.gene26069.t1 MTR_8g062310 33.636 220 108 9 1 204 5 202 2.96e-19 86.7
MS.gene26069.t1 MTR_7g033990 32.103 271 148 10 1 259 1 247 3.49e-19 86.7
MS.gene26069.t1 MTR_7g033945 36.269 193 88 8 1 179 1 172 3.90e-19 82.4
MS.gene26069.t1 MTR_5g058000 33.200 250 142 9 11 255 8 237 4.83e-19 85.9
MS.gene26069.t1 MTR_5g007410 32.114 246 148 8 13 255 28 257 5.35e-19 86.3
MS.gene26069.t1 MTR_7g007370 30.556 252 113 6 11 259 17 209 5.65e-19 85.1
MS.gene26069.t1 MTR_7g034115 35.714 210 112 8 1 204 1 193 1.33e-18 84.3
MS.gene26069.t1 MTR_7g056277 36.139 202 110 6 11 207 259 446 1.35e-18 85.1
MS.gene26069.t1 MTR_4g032730 34.951 206 122 8 11 209 15 215 1.37e-18 85.1
MS.gene26069.t1 MTR_8g445780 28.226 248 144 7 3 239 5 229 2.25e-18 84.0
MS.gene26069.t1 MTR_3g467400 31.365 271 139 10 11 258 3 249 3.46e-18 83.2
MS.gene26069.t1 MTR_8g014260 32.911 237 132 7 3 228 8 228 4.98e-18 83.2
MS.gene26069.t1 MTR_1089s0010 32.558 258 138 8 8 255 5 236 5.07e-18 82.8
MS.gene26069.t1 MTR_5g031970 30.337 267 145 9 2 259 7 241 5.47e-18 82.4
MS.gene26069.t1 MTR_3g114200 36.538 156 70 5 10 157 18 152 7.25e-18 78.6
MS.gene26069.t1 MTR_7g033915 34.842 221 90 10 1 207 1 181 8.25e-18 82.0
MS.gene26069.t1 MTR_6g022500 36.139 202 109 9 11 207 101 287 1.23e-17 82.4
MS.gene26069.t1 MTR_8g058965 35.211 213 106 10 11 202 13 214 1.24e-17 82.0
MS.gene26069.t1 MTR_6g022360 37.313 201 99 7 11 209 43 218 2.50e-17 81.3
MS.gene26069.t1 MTR_7g060470 33.209 268 143 9 11 256 3 256 8.00e-17 79.7
MS.gene26069.t1 MTR_1g066830 32.661 248 147 9 11 255 8 238 8.02e-17 79.3
MS.gene26069.t1 MTR_0009s0080 31.727 249 144 8 13 255 20 248 1.31e-16 79.0
MS.gene26069.t1 MTR_7g023310 30.653 199 120 6 11 206 26 209 2.68e-16 78.2
MS.gene26069.t1 MTR_1g014450 30.144 209 135 5 4 208 9 210 4.21e-16 77.8
MS.gene26069.t1 MTR_3g071850 30.469 256 148 9 9 255 22 256 6.99e-16 77.4
MS.gene26069.t1 MTR_1g492880 40.541 111 50 3 11 117 6 104 9.25e-16 71.6
MS.gene26069.t1 MTR_8g062010 33.171 205 118 10 1 200 1 191 9.77e-16 76.6
MS.gene26069.t1 MTR_8g014290 35.065 154 89 5 11 156 10 160 2.04e-15 72.0
MS.gene26069.t1 MTR_4g047950 32.663 199 110 6 1 190 1 184 2.62e-15 75.1
MS.gene26069.t1 MTR_1g492880 45.833 96 36 3 11 102 6 89 3.64e-15 69.7
MS.gene26069.t1 MTR_8g062270 32.020 203 123 7 11 204 16 212 4.21e-15 74.7
MS.gene26069.t1 MTR_5g080710 33.488 215 118 8 2 209 24 220 6.19e-15 74.3
MS.gene26069.t1 MTR_8g062080 36.098 205 104 11 11 204 23 211 7.63e-15 73.9
MS.gene26069.t1 MTR_6g044560 30.638 235 124 7 1 207 168 391 1.01e-14 73.9
MS.gene26069.t1 MTR_8g468840 33.488 215 121 7 2 204 5 209 1.11e-14 73.6
MS.gene26069.t1 MTR_8g469020 35.211 213 108 11 11 202 7 210 1.53e-14 73.2
MS.gene26069.t1 MTR_2g036470 31.731 208 120 6 2 202 5 197 2.27e-14 72.4
MS.gene26069.t1 MTR_4g080787 29.064 203 130 6 11 204 19 216 2.38e-14 72.8
MS.gene26069.t1 MTR_8g070950 33.810 210 112 10 4 204 8 199 2.59e-14 72.4
MS.gene26069.t1 MTR_7g033470 34.694 147 49 2 11 157 14 113 2.79e-14 68.6
MS.gene26069.t1 MTR_5g087940 34.426 183 91 7 11 188 26 184 2.85e-14 72.0
MS.gene26069.t1 MTR_8g077460 31.197 234 136 9 8 231 7 225 3.22e-14 72.0
MS.gene26069.t1 MTR_6g040270 33.333 216 115 9 5 208 2 200 3.56e-14 71.6
MS.gene26069.t1 MTR_4g080590 28.934 197 124 5 11 205 23 205 4.29e-14 71.6
MS.gene26069.t1 MTR_2g007550 31.746 189 87 6 1 173 1 163 4.76e-14 71.2
MS.gene26069.t1 MTR_4g080590 28.934 197 124 5 11 205 23 205 5.35e-14 71.6
MS.gene26069.t1 MTR_4g093690 30.348 201 112 6 11 201 18 200 5.43e-14 70.5
MS.gene26069.t1 MTR_7g056280 35.795 176 91 7 12 178 7 169 6.57e-14 71.2
MS.gene26069.t1 MTR_4g056030 33.173 208 110 9 8 204 6 195 1.32e-13 70.5
MS.gene26069.t1 MTR_2g082800 32.995 197 107 8 4 192 20 199 1.48e-13 70.1
MS.gene26069.t1 MTR_5g021550 35.256 156 78 6 11 155 19 162 1.61e-13 67.0
MS.gene26069.t1 MTR_6g044572 31.111 225 116 7 11 207 2 215 1.72e-13 69.7
MS.gene26069.t1 MTR_5g039490 30.144 209 127 5 11 211 20 217 1.90e-13 69.7
MS.gene26069.t1 MTR_8g467790 35.266 207 102 13 11 202 148 337 2.13e-13 69.7
MS.gene26069.t1 MTR_6g092430 27.895 190 112 5 4 183 3 177 2.18e-13 69.7
MS.gene26069.t1 MTR_1g067190 30.769 156 89 4 3 157 7 144 2.57e-13 68.9
MS.gene26069.t1 MTR_3g113782 50.794 63 25 1 1 57 1 63 2.82e-13 64.3
MS.gene26069.t1 MTR_2g099980 31.285 179 95 7 11 179 38 198 3.77e-13 68.9
MS.gene26069.t1 MTR_7g033940 39.200 125 48 5 13 130 96 199 5.10e-13 67.0
MS.gene26069.t1 MTR_3g095600 31.855 248 121 10 11 251 4 210 8.07e-13 67.4
MS.gene26069.t1 MTR_2g007100 68.182 44 14 0 11 54 2 45 1.07e-12 62.4
MS.gene26069.t1 MTR_1g011410 28.780 205 122 4 11 208 315 502 1.62e-12 67.4
MS.gene26069.t1 MTR_8g468760 33.005 203 121 8 11 204 9 205 1.71e-12 67.0
MS.gene26069.t1 MTR_2g047848 28.837 215 125 7 6 208 2 200 1.76e-12 67.0
MS.gene26069.t1 MTR_5g082930 45.679 81 34 1 13 93 17 87 2.18e-12 64.7
MS.gene26069.t1 MTR_4g080773 29.851 201 127 6 11 202 19 214 2.68e-12 66.6
MS.gene26069.t1 MTR_4g080773 29.851 201 127 6 11 202 19 214 2.77e-12 66.6
MS.gene26069.t1 MTR_2g082850 33.149 181 104 7 4 178 15 184 3.12e-12 66.2
MS.gene26069.t1 MTR_7g022105 32.124 193 102 7 3 184 35 209 3.53e-12 66.2
MS.gene26069.t1 MTR_5g065100 32.632 190 109 8 16 202 13 186 4.61e-12 65.9
MS.gene26069.t1 MTR_3g036320 32.065 184 99 5 13 188 22 187 6.41e-12 65.1
MS.gene26069.t1 MTR_5g092960 30.901 233 137 8 11 235 19 235 7.22e-12 65.1
MS.gene26069.t1 MTR_7g098590 54.386 57 24 1 4 58 9 65 7.40e-12 61.6
MS.gene26069.t1 MTR_2g100590 30.275 218 138 8 11 223 42 250 7.46e-12 65.1
MS.gene26069.t1 MTR_2g100590 30.275 218 138 8 11 223 42 250 7.63e-12 65.1
MS.gene26069.t1 MTR_5g039470 29.630 243 138 10 27 259 1 220 7.77e-12 64.7
MS.gene26069.t1 MTR_8g014180 72.973 37 10 0 11 47 17 53 8.38e-12 59.3
MS.gene26069.t1 MTR_5g005690 30.088 226 101 7 13 204 23 225 8.81e-12 65.1
MS.gene26069.t1 MTR_8g467800 32.663 199 116 6 11 204 20 205 9.48e-12 64.7
MS.gene26069.t1 MTR_2g100590 30.964 197 125 7 11 202 42 232 9.84e-12 65.1
MS.gene26069.t1 MTR_2g082880 36.158 177 81 7 11 178 10 163 9.95e-12 64.7
MS.gene26069.t1 MTR_5g092960 30.901 233 137 8 11 235 19 235 1.26e-11 64.3
MS.gene26069.t1 MTR_1g013560 28.934 197 126 5 11 202 19 206 1.28e-11 64.3
MS.gene26069.t1 MTR_2g091145 30.151 199 126 8 11 204 21 211 1.67e-11 63.9
MS.gene26069.t1 MTR_7g081290 61.702 47 18 0 11 57 18 64 1.80e-11 63.2
MS.gene26069.t1 MTR_1g013580 26.887 212 131 7 11 212 19 216 1.81e-11 63.9
MS.gene26069.t1 MTR_8g467800 32.663 199 116 6 11 204 20 205 1.85e-11 63.9
MS.gene26069.t1 MTR_4g057725 27.451 204 130 6 11 207 22 214 2.19e-11 63.9
MS.gene26069.t1 MTR_2g047858 27.861 201 125 5 11 204 115 302 2.20e-11 63.9
MS.gene26069.t1 MTR_1g013560 28.061 196 129 4 11 202 19 206 2.35e-11 63.5
MS.gene26069.t1 MTR_5g039970 26.667 225 143 7 11 232 19 224 2.37e-11 63.2
MS.gene26069.t1 MTR_7g021990 31.068 206 113 7 3 197 34 221 2.64e-11 63.5
MS.gene26069.t1 MTR_5g073400 37.838 111 63 2 93 203 7 111 3.34e-11 60.1
MS.gene26069.t1 MTR_3g099900 27.426 237 122 9 11 230 18 221 3.65e-11 63.2
MS.gene26069.t1 MTR_4g056020 30.000 220 122 9 9 218 7 204 4.20e-11 62.8
MS.gene26069.t1 MTR_1g021825 27.778 198 121 5 11 202 17 198 4.71e-11 62.8
MS.gene26069.t1 MTR_1g021825 27.778 198 121 5 11 202 88 269 5.19e-11 62.8
MS.gene26069.t1 MTR_3g023470 32.161 199 101 8 5 188 2 181 5.31e-11 62.4
MS.gene26069.t1 MTR_8g062300 30.415 217 115 9 11 204 26 229 5.92e-11 62.4
MS.gene26069.t1 MTR_7g021950 31.068 206 113 7 3 197 34 221 6.31e-11 62.4
MS.gene26069.t1 MTR_1g038710 29.665 209 120 7 9 205 17 210 9.21e-11 62.0
MS.gene26069.t1 MTR_3g023270 27.869 244 147 7 9 248 10 228 9.59e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26069.t1 AT4G14103 37.255 204 111 8 11 209 8 199 2.26e-24 100
MS.gene26069.t1 AT4G14103 37.255 204 111 8 11 209 8 199 2.26e-24 100
MS.gene26069.t1 AT4G14103 37.255 204 111 8 11 209 8 199 2.70e-24 101
MS.gene26069.t1 AT4G14096 37.129 202 112 7 11 209 8 197 3.58e-24 100
MS.gene26069.t1 AT4G14096 37.129 202 112 7 11 209 8 197 3.58e-24 100
MS.gene26069.t1 AT1G78750 34.802 227 127 8 5 223 12 225 6.96e-24 100
MS.gene26069.t1 AT1G78750 34.802 227 127 8 5 223 12 225 6.96e-24 100
MS.gene26069.t1 AT3G60040 33.898 236 111 7 11 218 13 231 4.64e-22 95.5
MS.gene26069.t1 AT3G60040 33.755 237 112 7 11 219 232 451 4.86e-22 95.5
MS.gene26069.t1 AT3G60040 33.755 237 112 7 11 219 233 452 5.20e-22 95.5
MS.gene26069.t1 AT3G60040 33.755 237 112 7 11 219 232 451 5.50e-22 95.1
MS.gene26069.t1 AT1G16930 34.123 211 110 7 2 204 6 195 6.15e-22 94.7
MS.gene26069.t1 AT1G16930 34.123 211 110 7 2 204 6 195 6.15e-22 94.7
MS.gene26069.t1 AT1G16930 34.123 211 110 7 2 204 6 195 6.15e-22 94.7
MS.gene26069.t1 AT3G60040 34.081 223 106 6 11 209 230 435 6.46e-22 95.1
MS.gene26069.t1 AT1G69630 34.500 200 112 5 11 206 18 202 1.14e-20 90.9
MS.gene26069.t1 AT4G13985 31.963 219 128 8 1 210 9 215 6.69e-20 89.0
MS.gene26069.t1 AT3G59190 33.195 241 133 9 1 223 1 231 8.75e-20 87.8
MS.gene26069.t1 AT3G59190 33.195 241 133 10 1 223 1 231 2.05e-19 87.4
MS.gene26069.t1 AT1G51370 32.812 192 110 4 11 202 19 191 3.98e-19 85.9
MS.gene26069.t1 AT1G51370 32.812 192 110 4 11 202 19 191 6.16e-19 85.9
MS.gene26069.t1 AT1G51370 32.812 192 110 4 11 202 19 191 7.82e-19 85.5
MS.gene26069.t1 AT2G42730 32.673 202 123 8 11 206 5 199 1.16e-18 85.1
MS.gene26069.t1 AT3G44060 35.859 198 106 7 16 206 4 187 1.33e-18 84.7
MS.gene26069.t1 AT4G26340 33.168 202 111 6 11 206 2 185 1.39e-18 84.7
MS.gene26069.t1 AT1G55660 32.735 223 137 5 11 229 53 266 1.74e-18 84.0
MS.gene26069.t1 AT5G22730 33.000 200 110 6 11 204 28 209 2.04e-18 84.0
MS.gene26069.t1 AT5G22730 33.000 200 110 6 11 204 28 209 2.18e-18 84.3
MS.gene26069.t1 AT5G22730 33.000 200 110 6 11 204 28 209 2.18e-18 84.3
MS.gene26069.t1 AT1G55660 32.735 223 137 5 11 229 53 266 2.76e-18 84.3
MS.gene26069.t1 AT1G78760 30.144 209 118 5 4 204 9 197 2.79e-18 84.0
MS.gene26069.t1 AT4G00160 35.160 219 120 7 11 223 16 218 3.52e-18 84.0
MS.gene26069.t1 AT1G16940 31.330 233 126 11 1 226 1 206 3.63e-18 83.6
MS.gene26069.t1 AT4G00315 33.040 227 129 8 11 228 2 214 3.87e-18 83.6
MS.gene26069.t1 AT1G66310 30.693 202 126 6 3 204 11 198 1.02e-17 82.4
MS.gene26069.t1 AT3G59200 33.649 211 115 9 11 211 7 202 1.52e-17 81.3
MS.gene26069.t1 AT3G59200 35.149 202 106 9 11 202 7 193 1.56e-17 82.0
MS.gene26069.t1 AT5G56420 33.480 227 131 7 11 233 6 216 1.72e-17 81.6
MS.gene26069.t1 AT5G56420 33.480 227 131 7 11 233 6 216 1.72e-17 81.6
MS.gene26069.t1 AT5G56420 33.480 227 131 7 11 233 6 216 1.72e-17 81.6
MS.gene26069.t1 AT1G80470 32.663 199 113 5 11 204 15 197 2.33e-17 81.6
MS.gene26069.t1 AT5G22610 31.132 212 121 6 11 213 18 213 3.57e-17 80.9
MS.gene26069.t1 AT1G58310 32.420 219 124 7 8 209 5 216 5.23e-17 80.5
MS.gene26069.t1 AT5G22610 32.512 203 112 6 11 204 18 204 5.53e-17 80.5
MS.gene26069.t1 AT5G44490 30.500 200 122 6 9 204 15 201 6.36e-17 80.1
MS.gene26069.t1 AT5G44490 30.500 200 122 6 9 204 15 201 6.44e-17 80.1
MS.gene26069.t1 AT5G56690 32.653 196 122 5 13 206 4 191 8.17e-17 79.7
MS.gene26069.t1 AT2G26030 33.163 196 109 7 11 201 4 182 9.03e-17 79.7
MS.gene26069.t1 AT5G56380 34.450 209 116 6 11 211 2 197 9.17e-17 79.7
MS.gene26069.t1 AT5G56380 34.450 209 116 6 11 211 2 197 9.17e-17 79.7
MS.gene26069.t1 AT2G26030 33.163 196 109 7 11 201 4 182 1.10e-16 79.3
MS.gene26069.t1 AT2G26030 33.163 196 109 7 11 201 4 182 1.10e-16 79.3
MS.gene26069.t1 AT2G04230 32.394 213 126 6 11 217 13 213 1.23e-16 79.3
MS.gene26069.t1 AT5G18770 33.005 203 116 6 8 204 21 209 1.26e-16 79.0
MS.gene26069.t1 AT5G18770 33.005 203 116 6 8 204 21 209 1.38e-16 79.3
MS.gene26069.t1 AT3G44810 34.171 199 119 6 16 209 12 203 1.66e-16 79.0
MS.gene26069.t1 AT1G60410 35.323 201 107 7 11 204 10 194 1.69e-16 78.6
MS.gene26069.t1 AT2G42720 31.907 257 143 10 11 258 2 235 1.74e-16 79.0
MS.gene26069.t1 AT3G58860 32.273 220 114 8 8 212 4 203 2.02e-16 78.6
MS.gene26069.t1 AT5G60610 31.343 201 110 6 11 205 2 180 2.22e-16 78.2
MS.gene26069.t1 AT5G60610 31.343 201 110 6 11 205 2 180 2.22e-16 78.2
MS.gene26069.t1 AT1G48400 35.484 217 117 9 1 209 1 202 2.58e-16 78.6
MS.gene26069.t1 AT1G48400 35.484 217 117 9 1 209 1 202 3.17e-16 78.2
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 4.69e-16 76.6
MS.gene26069.t1 AT5G53635 31.343 201 110 6 12 204 1 181 5.48e-16 77.4
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 5.75e-16 77.0
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 5.75e-16 77.0
MS.gene26069.t1 AT2G26860 33.649 211 110 8 11 210 2 193 6.12e-16 77.0
MS.gene26069.t1 AT2G26860 33.649 211 110 8 11 210 2 193 6.12e-16 77.0
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 6.65e-16 77.4
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 8.98e-16 76.6
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 8.98e-16 76.6
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 8.98e-16 76.6
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 12 206 8.98e-16 76.6
MS.gene26069.t1 AT1G06630 33.019 212 109 7 11 206 21 215 9.10e-16 76.6
MS.gene26069.t1 AT3G42770 34.653 202 105 7 16 204 4 191 1.20e-15 76.6
MS.gene26069.t1 AT1G78840 34.483 203 104 6 11 207 5 184 1.51e-15 76.3
MS.gene26069.t1 AT1G78840 34.483 203 104 6 11 207 5 184 1.51e-15 76.3
MS.gene26069.t1 AT3G59210 33.010 206 119 8 11 209 7 200 1.86e-15 75.9
MS.gene26069.t1 AT3G59210 33.010 206 119 8 11 209 7 200 1.86e-15 75.9
MS.gene26069.t1 AT3G59210 33.010 206 119 8 11 209 7 200 1.86e-15 75.9
MS.gene26069.t1 AT3G59210 33.010 206 119 8 11 209 7 200 1.86e-15 75.9
MS.gene26069.t1 AT3G59210 33.010 206 119 8 11 209 7 200 1.86e-15 75.9
MS.gene26069.t1 AT5G56370 35.052 194 105 6 11 200 2 178 2.35e-15 75.5
MS.gene26069.t1 AT5G56370 35.052 194 105 6 11 200 2 178 2.35e-15 75.5
MS.gene26069.t1 AT5G25860 27.273 231 128 7 1 207 1 215 2.62e-15 75.5
MS.gene26069.t1 AT5G56370 35.052 194 105 6 11 200 2 178 3.03e-15 74.3
MS.gene26069.t1 AT4G15060 31.441 229 137 7 8 229 169 384 3.03e-15 75.5
MS.gene26069.t1 AT3G28410 31.373 204 102 9 11 205 28 202 4.72e-15 74.7
MS.gene26069.t1 AT4G15060 31.416 226 135 7 11 229 26 238 5.44e-15 74.3
MS.gene26069.t1 AT5G02700 31.944 216 106 10 2 205 15 201 5.55e-15 74.3
MS.gene26069.t1 AT5G53840 32.500 200 103 5 13 204 20 195 6.48e-15 74.3
MS.gene26069.t1 AT4G10400 30.045 223 133 6 11 226 2 208 7.65e-15 73.9
MS.gene26069.t1 AT4G10400 30.045 223 133 6 11 226 2 208 7.65e-15 73.9
MS.gene26069.t1 AT4G10400 30.045 223 133 6 11 226 2 208 7.65e-15 73.9
MS.gene26069.t1 AT5G56440 32.161 199 110 7 11 202 2 182 8.10e-15 73.9
MS.gene26069.t1 AT5G18780 31.429 210 121 7 1 206 1 191 1.19e-14 73.6
MS.gene26069.t1 AT5G18780 31.429 210 121 7 1 206 1 191 1.19e-14 73.6
MS.gene26069.t1 AT5G27750 30.806 211 111 8 10 204 4 195 1.23e-14 73.6
MS.gene26069.t1 AT5G18780 31.429 210 121 7 1 206 1 191 1.23e-14 73.2
MS.gene26069.t1 AT5G18780 31.429 210 121 7 1 206 1 191 1.23e-14 73.2
MS.gene26069.t1 AT5G27750 30.806 211 111 8 10 204 4 195 1.44e-14 72.8
MS.gene26069.t1 AT5G22660 30.000 210 122 6 1 204 1 191 1.53e-14 72.4
MS.gene26069.t1 AT5G22660 30.000 210 122 6 1 204 1 191 1.80e-14 72.8
MS.gene26069.t1 AT3G58880 33.333 219 108 9 11 213 3 199 2.18e-14 72.8
MS.gene26069.t1 AT3G59230 30.097 206 118 8 11 202 12 205 2.46e-14 72.8
MS.gene26069.t1 AT4G26350 30.332 211 119 7 11 213 2 192 2.77e-14 72.4
MS.gene26069.t1 AT5G44940 33.010 206 109 9 10 204 4 191 3.70e-14 71.6
MS.gene26069.t1 AT1G32375 30.804 224 132 7 11 227 2 209 4.30e-14 71.6
MS.gene26069.t1 AT1G32375 30.804 224 132 7 11 227 2 209 4.30e-14 71.6
MS.gene26069.t1 AT1G66320 27.513 189 123 4 15 203 34 208 4.92e-14 71.6
MS.gene26069.t1 AT5G53640 29.353 201 119 5 7 204 18 198 6.44e-14 69.3
MS.gene26069.t1 AT1G78730 29.952 207 111 5 2 206 11 185 6.99e-14 71.2
MS.gene26069.t1 AT4G09920 30.653 199 117 5 11 204 2 184 8.98e-14 70.1
MS.gene26069.t1 AT4G09920 30.653 199 117 5 11 204 2 184 8.98e-14 70.1
MS.gene26069.t1 AT4G09920 30.653 199 117 5 11 204 2 184 8.98e-14 70.1
MS.gene26069.t1 AT4G22280 32.273 220 99 8 11 209 2 192 8.98e-14 70.9
MS.gene26069.t1 AT4G22280 32.273 220 99 8 11 209 2 192 9.95e-14 70.1
MS.gene26069.t1 AT3G58930 32.743 226 111 10 11 214 2 208 1.01e-13 70.9
MS.gene26069.t1 AT3G58930 32.743 226 111 10 11 214 2 208 1.01e-13 70.9
MS.gene26069.t1 AT3G58930 32.743 226 111 10 11 214 2 208 1.01e-13 70.9
MS.gene26069.t1 AT4G27050 29.469 207 122 6 11 202 4 201 1.02e-13 70.9
MS.gene26069.t1 AT4G27050 29.469 207 122 6 11 202 4 201 1.02e-13 70.9
MS.gene26069.t1 AT4G27050 29.469 207 122 6 11 202 4 201 1.02e-13 70.9
MS.gene26069.t1 AT4G27050 29.469 207 122 6 11 202 4 201 1.02e-13 70.9
MS.gene26069.t1 AT4G27050 29.469 207 122 6 11 202 4 201 1.02e-13 70.9
MS.gene26069.t1 AT4G09920 30.653 199 117 5 11 204 2 184 1.06e-13 70.1
MS.gene26069.t1 AT4G09920 30.653 199 117 5 11 204 2 184 1.06e-13 70.1
MS.gene26069.t1 AT5G44950 34.466 206 99 10 11 204 4 185 1.30e-13 70.5
MS.gene26069.t1 AT1G66300 26.442 208 129 4 2 204 20 208 1.38e-13 70.5
MS.gene26069.t1 AT3G59170 31.707 246 109 9 11 217 7 232 1.63e-13 70.1
MS.gene26069.t1 AT3G52680 31.683 202 111 6 11 204 21 203 1.63e-13 70.1
MS.gene26069.t1 AT1G66290 29.897 194 111 6 11 200 29 201 2.30e-13 69.7
MS.gene26069.t1 AT3G52680 31.683 202 111 6 11 204 21 203 2.66e-13 69.3
MS.gene26069.t1 AT3G58900 35.294 204 111 8 11 206 2 192 2.81e-13 68.9
MS.gene26069.t1 AT3G03040 31.401 207 124 5 11 209 2 198 2.96e-13 69.3
MS.gene26069.t1 AT3G58900 35.644 202 109 8 11 204 2 190 3.15e-13 69.3
MS.gene26069.t1 AT3G58900 35.294 204 111 8 11 206 2 192 3.20e-13 68.9
MS.gene26069.t1 AT3G58900 35.294 204 111 8 11 206 2 192 3.20e-13 68.9
MS.gene26069.t1 AT3G59240 27.230 213 140 6 11 218 8 210 5.32e-13 68.6
MS.gene26069.t1 AT3G58940 32.727 220 110 10 11 209 2 204 5.67e-13 68.6
MS.gene26069.t1 AT3G58940 32.727 220 110 10 11 209 2 204 5.67e-13 68.6
MS.gene26069.t1 AT5G41840 31.628 215 116 8 11 207 14 215 6.76e-13 68.6
MS.gene26069.t1 AT1G21990 31.429 210 115 7 1 202 1 189 9.32e-13 67.8
MS.gene26069.t1 AT5G41830 30.698 215 117 8 11 207 13 213 1.47e-12 67.4
MS.gene26069.t1 AT3G49150 30.846 201 123 7 9 204 14 203 1.48e-12 67.4
MS.gene26069.t1 AT5G44980 34.826 201 108 8 11 204 4 188 1.59e-12 67.0
MS.gene26069.t1 AT5G44980 34.826 201 108 8 11 204 4 188 1.59e-12 67.0
MS.gene26069.t1 AT5G44980 34.826 201 108 8 11 204 4 188 1.96e-12 66.2
MS.gene26069.t1 AT5G44980 34.826 201 108 8 11 204 4 188 1.96e-12 66.2
MS.gene26069.t1 AT5G56560 30.348 201 110 7 13 205 7 185 2.08e-12 66.6
MS.gene26069.t1 AT3G03030 32.536 209 120 6 11 209 2 199 3.13e-12 65.9
MS.gene26069.t1 AT1G60400 33.493 209 99 8 11 204 14 197 3.34e-12 66.2
MS.gene26069.t1 AT3G03030 32.536 209 120 6 11 209 2 199 3.45e-12 66.2
MS.gene26069.t1 AT3G26922 30.531 226 128 8 11 232 14 214 3.52e-12 65.5
MS.gene26069.t1 AT3G26922 30.531 226 128 8 11 232 14 214 3.52e-12 65.5
MS.gene26069.t1 AT5G38392 30.732 205 117 8 11 202 2 194 3.79e-12 64.3
MS.gene26069.t1 AT5G56560 30.348 201 110 7 13 205 7 185 3.86e-12 66.2
MS.gene26069.t1 AT3G56780 28.922 204 120 5 6 204 2 185 5.29e-12 65.9
MS.gene26069.t1 AT3G58960 25.592 211 135 6 11 214 2 197 6.20e-12 65.5
MS.gene26069.t1 AT3G56780 28.922 204 120 5 6 204 2 185 6.96e-12 65.1
MS.gene26069.t1 AT3G56780 28.922 204 120 5 6 204 2 185 7.64e-12 65.1
MS.gene26069.t1 AT1G64540 34.500 200 93 10 13 204 7 176 8.64e-12 65.1
MS.gene26069.t1 AT1G64540 34.500 200 93 10 13 204 7 176 8.64e-12 65.1
MS.gene26069.t1 AT5G03100 27.136 199 122 4 4 202 2 177 1.79e-11 63.5
MS.gene26069.t1 AT5G03100 27.136 199 122 4 4 202 2 177 1.79e-11 63.5
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 1.93e-11 63.5
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 1.93e-11 63.5
MS.gene26069.t1 AT5G56410 30.198 202 122 6 18 206 10 205 1.97e-11 63.9
MS.gene26069.t1 AT4G13965 27.885 208 133 4 11 217 10 201 2.35e-11 63.5
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 29 213 2.42e-11 63.5
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 2.61e-11 63.2
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 2.61e-11 63.2
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 2.61e-11 63.2
MS.gene26069.t1 AT2G29910 28.708 209 116 7 11 210 5 189 2.61e-11 63.2
MS.gene26069.t1 AT3G44090 29.703 202 115 5 16 207 29 213 2.63e-11 63.5
MS.gene26069.t1 AT5G56810 27.848 237 143 8 11 241 15 229 2.65e-11 63.2
MS.gene26069.t1 AT1G13780 29.665 209 114 8 10 202 9 200 2.89e-11 63.5
MS.gene26069.t1 AT2G29930 31.163 215 116 9 1 206 1 192 2.93e-11 63.5
MS.gene26069.t1 AT2G29930 31.163 215 116 9 1 206 1 192 2.93e-11 63.5
MS.gene26069.t1 AT5G56810 27.848 237 143 8 11 241 15 229 3.38e-11 63.2
MS.gene26069.t1 AT1G13780 29.665 209 114 8 10 202 9 200 3.87e-11 62.8
MS.gene26069.t1 AT5G35995 34.158 202 104 9 11 204 5 185 4.67e-11 62.8
MS.gene26069.t1 AT5G35995 34.158 202 104 9 11 204 5 185 4.67e-11 62.8
MS.gene26069.t1 AT3G58920 29.412 221 130 9 11 217 2 210 4.89e-11 62.8
MS.gene26069.t1 AT4G00320 29.384 211 125 6 11 207 13 213 5.13e-11 62.8
MS.gene26069.t1 AT1G05080 33.679 193 111 7 11 200 13 191 6.57e-11 62.4
MS.gene26069.t1 AT1G32020 29.333 150 87 5 11 157 4 137 8.18e-11 59.7
MS.gene26069.t1 AT5G22700 29.612 206 110 6 9 204 41 221 9.09e-11 62.0
MS.gene26069.t1 AT5G22700 29.612 206 110 6 9 204 4 184 9.94e-11 62.0
MS.gene26069.t1 AT5G22700 29.612 206 110 6 9 204 4 184 9.94e-11 62.0
MS.gene26069.t1 AT5G22700 29.612 206 110 6 9 204 4 184 9.94e-11 62.0
MS.gene26069.t1 AT5G22700 29.612 206 110 6 9 204 4 184 9.94e-11 62.0

Find 56 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTCGTTAAACCTAAAA+AGG 0.159796 7.4:-54349149 None:intergenic
ACACTAAATCTTGATCATTT+AGG 0.244078 7.4:-54349473 None:intergenic
CTGTTAGCATTCTTAGTTGT+AGG 0.292381 7.4:+54349352 MS.gene26069:CDS
TTCTACCTCAAGGTTGGATA+TGG 0.306392 7.4:+54349210 MS.gene26069:CDS
ATATGTAAATCTTCAAGAAT+TGG 0.312602 7.4:-54349513 None:intergenic
AATTTACCAGATACCATTCT+AGG 0.313035 7.4:+54348967 MS.gene26069:CDS
AAAGTAAAGCATTTGTGCTT+TGG 0.334178 7.4:-54349616 None:intergenic
GCTAGTGGCAACAACCTCTT+TGG 0.372407 7.4:-54349013 None:intergenic
ATGAACAAACTTCTAAATAA+AGG 0.376198 7.4:-54349449 None:intergenic
TTGGGAGAAAAGAGAGAATA+TGG 0.376589 7.4:-54348990 None:intergenic
GAATTACGACCCGATCGAAT+TGG 0.379320 7.4:+54349113 MS.gene26069:CDS
CCCTCTGTTGTCTTTGCCGT+TGG 0.389736 7.4:-54349091 None:intergenic
GCATTCCCAGTGTGGTCAAA+TGG 0.395491 7.4:+54349256 MS.gene26069:CDS
GATTTAGTGTTGCTTCTAGT+TGG 0.411307 7.4:+54349486 MS.gene26069:CDS
ATAAGCTTTCACACTCTTGA+AGG 0.415041 7.4:-54349572 None:intergenic
CTTGAGGTAGAAACTCTTGA+TGG 0.433704 7.4:-54349199 None:intergenic
ATATGGCCTAGAATGGTATC+TGG 0.439179 7.4:-54348973 None:intergenic
ACTATACATAGAACTAAATC+AGG 0.456804 7.4:+54349680 MS.gene26069:CDS
CGAAGAGATGGAGGCATCAA+TGG 0.465005 7.4:+54349043 MS.gene26069:CDS
CATTCCCAGTGTGGTCAAAT+GGG 0.469316 7.4:+54349257 MS.gene26069:CDS
TGGCAACAACCTCTTTGGTT+GGG 0.474325 7.4:-54349008 None:intergenic
CTACAACTAAGAATGCTAAC+AGG 0.479917 7.4:-54349351 None:intergenic
CTTGTTTGCCATGTTTGTGA+AGG 0.496241 7.4:+54349392 MS.gene26069:CDS
TTGAAGGGTAAAAGAGTACT+TGG 0.496698 7.4:-54349556 None:intergenic
GTGGCAACAACCTCTTTGGT+TGG 0.498149 7.4:-54349009 None:intergenic
GGAATCTAGCTTGAACAAAA+CGG 0.502084 7.4:-54349178 None:intergenic
AAGAGTTTCTACCTCAAGGT+TGG 0.504347 7.4:+54349204 MS.gene26069:CDS
CATCAAGAGTTTCTACCTCA+AGG 0.508360 7.4:+54349200 MS.gene26069:CDS
AGAGAGAATATGGCCTAGAA+TGG 0.527418 7.4:-54348980 None:intergenic
TATTCATCATCCAATTCGAT+CGG 0.541608 7.4:-54349123 None:intergenic
CTAGCGTCCTATCGAAGAGA+TGG 0.541728 7.4:+54349031 MS.gene26069:CDS
ATTCATCATCCAATTCGATC+GGG 0.546581 7.4:-54349122 None:intergenic
TGACCACACTGGGAATGCTA+CGG 0.548803 7.4:-54349251 None:intergenic
TTGTTTGCCATGTTTGTGAA+GGG 0.553869 7.4:+54349393 MS.gene26069:CDS
TCAACCCATTTGACCACACT+GGG 0.554090 7.4:-54349261 None:intergenic
TAAGCTTTCACACTCTTGAA+GGG 0.567141 7.4:-54349571 None:intergenic
CAATACCATGTTGCACAACA+TGG 0.574646 7.4:-54349284 None:intergenic
GTCAACCCATTTGACCACAC+TGG 0.581562 7.4:-54349262 None:intergenic
CTTGATATCAACTTAACCAA+CGG 0.582550 7.4:+54349075 MS.gene26069:CDS
GATGCCTCCATCTCTTCGAT+AGG 0.594567 7.4:-54349038 None:intergenic
CAACATGGTATTGAGAGCCT+TGG 0.598576 7.4:+54349294 MS.gene26069:CDS
GCATTGTGAAGTGCTTTCAA+CGG 0.610515 7.4:-54349651 None:intergenic
GGGTAAAAGAGTACTTGGAG+TGG 0.620807 7.4:-54349551 None:intergenic
ACCAACGGCAAAGACAACAG+AGG 0.626712 7.4:+54349090 MS.gene26069:CDS
CCAACGGCAAAGACAACAGA+GGG 0.630942 7.4:+54349091 MS.gene26069:CDS
GCGTCCTATCGAAGAGATGG+AGG 0.636910 7.4:+54349034 MS.gene26069:CDS
TGTCATCAAGAAGAACAAGA+AGG 0.638376 7.4:+54348926 MS.gene26069:CDS
TCTCTTCGATAGGACGCTAG+TGG 0.659918 7.4:-54349028 None:intergenic
GTTGACCATGTTGTGCAACA+TGG 0.661674 7.4:+54349279 MS.gene26069:CDS
CAAACAAGTTGAGAACAACA+AGG 0.663917 7.4:-54349377 None:intergenic
CATCAAGAAGAACAAGAAGG+AGG 0.667905 7.4:+54348929 MS.gene26069:CDS
AAACCGTAGCATTCCCAGTG+TGG 0.678828 7.4:+54349248 MS.gene26069:CDS
TAGTGAAAAGAGTGAGACCA+AGG 0.682227 7.4:-54349311 None:intergenic
AATTACCATATCCAACCTTG+AGG 0.683658 7.4:-54349215 None:intergenic
GTTGAAAGCACTTCACAATG+CGG 0.685027 7.4:+54349653 MS.gene26069:CDS
AAACAAGTTGAGAACAACAA+GGG 0.705517 7.4:-54349376 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGTAAATCTTCAAGAAT+TGG - chr7.4:54349516-54349535 None:intergenic 20.0%
!! ATGAACAAACTTCTAAATAA+AGG - chr7.4:54349452-54349471 None:intergenic 20.0%
!!! TTCTAAATAAAGGATTTTGA+GGG - chr7.4:54349442-54349461 None:intergenic 20.0%
! AAACTCGTTAAACCTAAAAA+GGG - chr7.4:54349151-54349170 None:intergenic 25.0%
! ACACTAAATCTTGATCATTT+AGG - chr7.4:54349476-54349495 None:intergenic 25.0%
!! ATGATGAATATACCCTTTTT+AGG + chr7.4:54349136-54349155 MS.gene26069:CDS 25.0%
!! CTTCTAAATAAAGGATTTTG+AGG - chr7.4:54349443-54349462 None:intergenic 25.0%
AATTTACCAGATACCATTCT+AGG + chr7.4:54348967-54348986 MS.gene26069:CDS 30.0%
CAAACTCGTTAAACCTAAAA+AGG - chr7.4:54349152-54349171 None:intergenic 30.0%
CTTGATATCAACTTAACCAA+CGG + chr7.4:54349075-54349094 MS.gene26069:CDS 30.0%
TATTCATCATCCAATTCGAT+CGG - chr7.4:54349126-54349145 None:intergenic 30.0%
! AAACAAGTTGAGAACAACAA+GGG - chr7.4:54349379-54349398 None:intergenic 30.0%
! AAAGTAAAGCATTTGTGCTT+TGG - chr7.4:54349619-54349638 None:intergenic 30.0%
!! AAATAAAGGATTTTGAGGGA+GGG - chr7.4:54349438-54349457 None:intergenic 30.0%
!! TAAATAAAGGATTTTGAGGG+AGG - chr7.4:54349439-54349458 None:intergenic 30.0%
AATTACCATATCCAACCTTG+AGG - chr7.4:54349218-54349237 None:intergenic 35.0%
AGAAAAACCCTTCACAAACA+TGG - chr7.4:54349403-54349422 None:intergenic 35.0%
ATAAGCTTTCACACTCTTGA+AGG - chr7.4:54349575-54349594 None:intergenic 35.0%
ATTCATCATCCAATTCGATC+GGG - chr7.4:54349125-54349144 None:intergenic 35.0%
CTACAACTAAGAATGCTAAC+AGG - chr7.4:54349354-54349373 None:intergenic 35.0%
CTGTTAGCATTCTTAGTTGT+AGG + chr7.4:54349352-54349371 MS.gene26069:CDS 35.0%
TAAGCTTTCACACTCTTGAA+GGG - chr7.4:54349574-54349593 None:intergenic 35.0%
TGTCATCAAGAAGAACAAGA+AGG + chr7.4:54348926-54348945 MS.gene26069:CDS 35.0%
TTGGGAGAAAAGAGAGAATA+TGG - chr7.4:54348993-54349012 None:intergenic 35.0%
TTGTTTGCCATGTTTGTGAA+GGG + chr7.4:54349393-54349412 MS.gene26069:CDS 35.0%
! CAAACAAGTTGAGAACAACA+AGG - chr7.4:54349380-54349399 None:intergenic 35.0%
! GGAATCTAGCTTGAACAAAA+CGG - chr7.4:54349181-54349200 None:intergenic 35.0%
! TGAAGGGTTTTTCTTCTGTT+AGG + chr7.4:54349409-54349428 MS.gene26069:CDS 35.0%
!! AATAAAGGATTTTGAGGGAG+GGG - chr7.4:54349437-54349456 None:intergenic 35.0%
!! GATTTAGTGTTGCTTCTAGT+TGG + chr7.4:54349486-54349505 MS.gene26069:CDS 35.0%
!! TTGAAGGGTAAAAGAGTACT+TGG - chr7.4:54349559-54349578 None:intergenic 35.0%
AAGAGTTTCTACCTCAAGGT+TGG + chr7.4:54349204-54349223 MS.gene26069:CDS 40.0%
AGAGAGAATATGGCCTAGAA+TGG - chr7.4:54348983-54349002 None:intergenic 40.0%
ATATGGCCTAGAATGGTATC+TGG - chr7.4:54348976-54348995 None:intergenic 40.0%
CAATACCATGTTGCACAACA+TGG - chr7.4:54349287-54349306 None:intergenic 40.0%
CATCAAGAAGAACAAGAAGG+AGG + chr7.4:54348929-54348948 MS.gene26069:CDS 40.0%
CATCAAGAGTTTCTACCTCA+AGG + chr7.4:54349200-54349219 MS.gene26069:CDS 40.0%
CTTGAGGTAGAAACTCTTGA+TGG - chr7.4:54349202-54349221 None:intergenic 40.0%
CTTGTTTGCCATGTTTGTGA+AGG + chr7.4:54349392-54349411 MS.gene26069:CDS 40.0%
TAGTGAAAAGAGTGAGACCA+AGG - chr7.4:54349314-54349333 None:intergenic 40.0%
TTCTACCTCAAGGTTGGATA+TGG + chr7.4:54349210-54349229 MS.gene26069:CDS 40.0%
! GCATTGTGAAGTGCTTTCAA+CGG - chr7.4:54349654-54349673 None:intergenic 40.0%
!! GTTGAAAGCACTTCACAATG+CGG + chr7.4:54349653-54349672 MS.gene26069:CDS 40.0%
CATTCCCAGTGTGGTCAAAT+GGG + chr7.4:54349257-54349276 MS.gene26069:CDS 45.0%
GAATTACGACCCGATCGAAT+TGG + chr7.4:54349113-54349132 MS.gene26069:CDS 45.0%
GTTGACCATGTTGTGCAACA+TGG + chr7.4:54349279-54349298 MS.gene26069:CDS 45.0%
TCAACCCATTTGACCACACT+GGG - chr7.4:54349264-54349283 None:intergenic 45.0%
TGGCAACAACCTCTTTGGTT+GGG - chr7.4:54349011-54349030 None:intergenic 45.0%
! CAACATGGTATTGAGAGCCT+TGG + chr7.4:54349294-54349313 MS.gene26069:CDS 45.0%
! CTCTTTTCTCCCAACCAAAG+AGG + chr7.4:54348999-54349018 MS.gene26069:CDS 45.0%
!! GGGTAAAAGAGTACTTGGAG+TGG - chr7.4:54349554-54349573 None:intergenic 45.0%
AAACCGTAGCATTCCCAGTG+TGG + chr7.4:54349248-54349267 MS.gene26069:CDS 50.0%
ACCAACGGCAAAGACAACAG+AGG + chr7.4:54349090-54349109 MS.gene26069:CDS 50.0%
CCAACGGCAAAGACAACAGA+GGG + chr7.4:54349091-54349110 MS.gene26069:CDS 50.0%
CTAGCGTCCTATCGAAGAGA+TGG + chr7.4:54349031-54349050 MS.gene26069:CDS 50.0%
GATGCCTCCATCTCTTCGAT+AGG - chr7.4:54349041-54349060 None:intergenic 50.0%
GCATTCCCAGTGTGGTCAAA+TGG + chr7.4:54349256-54349275 MS.gene26069:CDS 50.0%
GCTAGTGGCAACAACCTCTT+TGG - chr7.4:54349016-54349035 None:intergenic 50.0%
GTCAACCCATTTGACCACAC+TGG - chr7.4:54349265-54349284 None:intergenic 50.0%
GTGGCAACAACCTCTTTGGT+TGG - chr7.4:54349012-54349031 None:intergenic 50.0%
TCTCTTCGATAGGACGCTAG+TGG - chr7.4:54349031-54349050 None:intergenic 50.0%
TGACCACACTGGGAATGCTA+CGG - chr7.4:54349254-54349273 None:intergenic 50.0%
!! CGAAGAGATGGAGGCATCAA+TGG + chr7.4:54349043-54349062 MS.gene26069:CDS 50.0%
CCCTCTGTTGTCTTTGCCGT+TGG - chr7.4:54349094-54349113 None:intergenic 55.0%
GCGTCCTATCGAAGAGATGG+AGG + chr7.4:54349034-54349053 MS.gene26069:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 54348925 54349701 54348925 ID=MS.gene26069
chr7.4 mRNA 54348925 54349701 54348925 ID=MS.gene26069.t1;Parent=MS.gene26069
chr7.4 exon 54348925 54349701 54348925 ID=MS.gene26069.t1.exon1;Parent=MS.gene26069.t1
chr7.4 CDS 54348925 54349701 54348925 ID=cds.MS.gene26069.t1;Parent=MS.gene26069.t1
Gene Sequence

>MS.gene26069

ATGTCATCAAGAAGAACAAGAAGGAGGTATGACGTCATCAGCAATTTACCAGATACCATTCTAGGCCATATTCTCTCTTTTCTCCCAACCAAAGAGGTTGTTGCCACTAGCGTCCTATCGAAGAGATGGAGGCATCAATGGTGCTCAGTTCTTGATATCAACTTAACCAACGGCAAAGACAACAGAGGGAATTACGACCCGATCGAATTGGATGATGAATATACCCTTTTTAGGTTTAACGAGTTTGTGTTCTCCGTTTTGTTCAAGCTAGATTCCATCAAGAGTTTCTACCTCAAGGTTGGATATGGTAATTCTGCTCTTGAAAACCGTAGCATTCCCAGTGTGGTCAAATGGGTTGACCATGTTGTGCAACATGGTATTGAGAGCCTTGGTCTCACTCTTTTCACTAGCATTGATATGAAATTGCCTGTTAGCATTCTTAGTTGTAGGACCCTTGTTGTTCTCAACTTGTTTGCCATGTTTGTGAAGGGTTTTTCTTCTGTTAGGCTCCCCTCCCTCAAAATCCTTTATTTAGAAGTTTGTTCATTCCTAAATGATCAAGATTTAGTGTTGCTTCTAGTTGGATGTCCAATTCTTGAAGATTTACATATAGAACATTTAGAATTCCACTCCAAGTACTCTTTTACCCTTCAAGAGTGTGAAAGCTTATGCTTAAGCTTAAGCAAGTTGACCAAAGCACAAATGCTTTACTTTTATCGTCATTTTCCGTTGAAAGCACTTCACAATGCGGAGAAACTATACATAGAACTAAATCAG

Protein sequence

>MS.gene26069.t1

MSSRRTRRRYDVISNLPDTILGHILSFLPTKEVVATSVLSKRWRHQWCSVLDINLTNGKDNRGNYDPIELDDEYTLFRFNEFVFSVLFKLDSIKSFYLKVGYGNSALENRSIPSVVKWVDHVVQHGIESLGLTLFTSIDMKLPVSILSCRTLVVLNLFAMFVKGFSSVRLPSLKILYLEVCSFLNDQDLVLLLVGCPILEDLHIEHLEFHSKYSFTLQECESLCLSLSKLTKAQMLYFYRHFPLKALHNAEKLYIELNQ