AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30260.t1 MTR_7g033990 79.538 303 59 3 1 301 74 375 5.38e-165 473
MS.gene30260.t1 MTR_7g033915 73.203 306 61 4 1 304 74 360 4.75e-158 453
MS.gene30260.t1 MTR_7g034120 56.913 311 119 7 1 304 1 303 1.04e-109 328
MS.gene30260.t1 MTR_7g033910 86.471 170 21 1 323 492 561 728 2.96e-89 288
MS.gene30260.t1 MTR_1g041245 50.158 317 136 9 1 304 74 381 8.02e-88 275
MS.gene30260.t1 MTR_7g034115 48.232 311 142 8 1 301 74 375 3.33e-84 265
MS.gene30260.t1 MTR_5g012840 46.667 300 111 5 1 296 52 306 4.24e-77 244
MS.gene30260.t1 MTR_2g072590 87.248 149 17 2 346 492 569 717 5.16e-76 253
MS.gene30260.t1 MTR_7g032380 43.366 309 133 8 4 304 77 351 1.75e-74 239
MS.gene30260.t1 MTR_7g032370 43.042 309 151 8 4 304 56 347 2.43e-67 220
MS.gene30260.t1 MTR_7g034110 42.904 303 125 5 1 299 74 332 1.38e-61 205
MS.gene30260.t1 MTR_0543s0010 41.250 320 149 12 4 307 152 448 3.98e-60 204
MS.gene30260.t1 MTR_7g115270 39.024 328 169 11 2 304 76 397 8.33e-58 197
MS.gene30260.t1 MTR_7g056433 42.006 319 167 11 1 307 75 387 1.06e-57 196
MS.gene30260.t1 MTR_7g098510 40.810 321 164 11 1 307 81 389 1.68e-57 196
MS.gene30260.t1 MTR_5g013500 40.923 325 149 12 1 304 58 360 3.36e-55 189
MS.gene30260.t1 MTR_0492s0020 40.453 309 145 12 4 296 152 437 1.39e-54 189
MS.gene30260.t1 MTR_7g088260 39.024 328 158 13 1 307 154 460 5.71e-54 188
MS.gene30260.t1 MTR_7g098570 39.375 320 164 13 1 304 83 388 7.68e-52 183
MS.gene30260.t1 MTR_3g108560 38.245 319 171 10 1 307 83 387 9.84e-52 180
MS.gene30260.t1 MTR_3g082890 39.820 334 155 12 1 300 157 478 2.27e-51 182
MS.gene30260.t1 MTR_3g087260 42.466 292 126 13 38 307 184 455 3.86e-51 181
MS.gene30260.t1 MTR_3g108150 39.144 327 156 13 4 307 79 385 4.05e-50 176
MS.gene30260.t1 MTR_7g098480 39.185 319 156 14 4 303 84 383 4.14e-49 176
MS.gene30260.t1 MTR_3g082890 34.501 371 160 13 1 300 77 435 1.23e-46 168
MS.gene30260.t1 MTR_7g056430 38.318 321 147 10 1 303 72 359 8.16e-46 172
MS.gene30260.t1 MTR_7g056420 38.318 321 147 10 1 303 72 359 9.47e-46 172
MS.gene30260.t1 MTR_3g036250 36.164 318 165 12 1 304 68 361 2.36e-45 162
MS.gene30260.t1 MTR_3g109982 40.780 282 138 14 40 301 196 468 4.43e-45 169
MS.gene30260.t1 MTR_3g109982 38.194 144 74 5 1 138 76 210 1.24e-13 73.9
MS.gene30260.t1 MTR_8g085430 34.768 302 121 6 3 297 84 316 1.18e-42 154
MS.gene30260.t1 MTR_7g026500 34.688 320 187 10 9 314 89 400 1.16e-41 153
MS.gene30260.t1 MTR_5g008950 35.849 318 159 14 10 304 65 360 8.43e-41 150
MS.gene30260.t1 MTR_7g056020 35.072 345 184 13 3 327 74 398 2.34e-40 154
MS.gene30260.t1 MTR_7g056277 34.528 307 182 7 9 309 335 628 3.33e-38 147
MS.gene30260.t1 MTR_5g008920 34.365 323 173 14 1 304 74 376 4.87e-38 143
MS.gene30260.t1 MTR_7g056287 32.812 320 170 9 9 309 79 372 5.70e-38 143
MS.gene30260.t1 MTR_3g040700 35.082 305 158 11 1 291 106 384 2.58e-37 142
MS.gene30260.t1 MTR_3g071850 34.277 318 167 13 10 302 102 402 2.12e-36 144
MS.gene30260.t1 MTR_6g045333 33.754 317 174 11 10 304 139 441 1.07e-35 138
MS.gene30260.t1 MTR_3g023630 32.143 308 187 10 4 303 75 368 1.38e-35 136
MS.gene30260.t1 MTR_5g045170 34.007 297 158 11 29 304 107 386 5.54e-35 135
MS.gene30260.t1 MTR_5g007410 34.295 312 172 13 10 301 102 400 8.39e-35 135
MS.gene30260.t1 MTR_3g105060 31.310 313 184 9 4 307 81 371 1.80e-33 130
MS.gene30260.t1 MTR_6g022500 33.866 313 173 11 9 304 176 471 3.43e-33 131
MS.gene30260.t1 MTR_2g020180 50.000 128 52 3 177 300 90 209 3.53e-33 125
MS.gene30260.t1 MTR_7g007080 37.597 258 125 11 67 304 133 374 2.07e-32 128
MS.gene30260.t1 MTR_7g081290 49.231 130 59 4 177 300 122 250 2.86e-32 124
MS.gene30260.t1 MTR_4g080610 37.449 243 129 11 76 298 109 348 6.91e-32 125
MS.gene30260.t1 MTR_2g007450 31.847 314 165 12 27 304 115 415 1.15e-31 126
MS.gene30260.t1 MTR_3g115430 50.847 118 53 2 187 299 1 118 2.69e-31 117
MS.gene30260.t1 MTR_5g058000 34.740 308 169 11 9 304 83 370 3.84e-31 124
MS.gene30260.t1 MTR_3g107120 32.609 322 174 12 10 310 93 392 3.85e-31 124
MS.gene30260.t1 MTR_3g107100 34.601 263 144 9 66 304 135 393 5.58e-31 124
MS.gene30260.t1 MTR_5g058100 36.187 257 138 10 66 304 131 379 5.92e-31 124
MS.gene30260.t1 MTR_7g033945 59.804 102 38 2 1 101 74 173 6.66e-31 118
MS.gene30260.t1 MTR_1g108820 32.000 300 147 13 10 278 80 353 1.08e-30 123
MS.gene30260.t1 MTR_5g073420 32.867 286 157 11 4 277 82 344 1.27e-30 122
MS.gene30260.t1 MTR_1g085120 33.333 282 159 9 45 304 192 466 2.85e-30 123
MS.gene30260.t1 MTR_1g085120 33.333 282 159 9 45 304 267 541 4.36e-30 123
MS.gene30260.t1 MTR_1g108800 36.220 254 138 8 66 304 93 337 4.43e-30 120
MS.gene30260.t1 MTR_7g060470 34.354 294 154 12 30 291 86 372 7.97e-30 120
MS.gene30260.t1 MTR_3g467400 32.166 314 174 12 9 307 76 365 1.69e-29 119
MS.gene30260.t1 MTR_3g108560 36.207 232 124 8 1 222 83 300 4.08e-29 117
MS.gene30260.t1 MTR_5g073370 34.615 286 156 13 10 278 77 348 2.09e-28 116
MS.gene30260.t1 MTR_1g066830 31.447 318 176 12 10 304 84 382 2.88e-28 116
MS.gene30260.t1 MTR_1g053025 29.470 302 169 12 28 304 102 384 1.82e-27 114
MS.gene30260.t1 MTR_5g063950 31.761 318 186 11 8 309 60 362 3.58e-27 112
MS.gene30260.t1 MTR_5g039470 32.302 291 158 13 4 273 55 327 3.80e-27 112
MS.gene30260.t1 MTR_7g114710 30.128 312 181 8 4 307 80 362 9.00e-27 111
MS.gene30260.t1 MTR_5g031970 33.550 307 165 14 8 304 74 351 1.96e-26 110
MS.gene30260.t1 MTR_3g107940 47.200 125 54 3 181 301 89 205 2.08e-26 110
MS.gene30260.t1 MTR_5g054920 36.413 184 96 7 107 277 2 177 2.22e-26 106
MS.gene30260.t1 MTR_1g107385 30.798 263 145 9 66 304 169 418 4.48e-26 110
MS.gene30260.t1 MTR_2g036470 32.399 321 170 15 11 304 91 391 5.58e-26 109
MS.gene30260.t1 MTR_0009s0080 29.661 354 197 15 10 338 94 420 8.28e-26 109
MS.gene30260.t1 MTR_5g039450 29.907 321 162 14 4 304 76 353 8.65e-26 108
MS.gene30260.t1 MTR_7g021990 35.827 254 136 10 67 299 168 415 1.48e-25 109
MS.gene30260.t1 MTR_7g021950 35.827 254 136 10 67 299 168 415 2.56e-25 109
MS.gene30260.t1 MTR_6g011460 31.366 322 179 12 4 304 116 416 4.14e-25 107
MS.gene30260.t1 MTR_3g107160 31.000 300 160 13 30 307 107 381 4.51e-25 107
MS.gene30260.t1 MTR_2g007400 31.868 273 134 13 64 304 146 398 4.94e-25 107
MS.gene30260.t1 MTR_6g040270 32.847 274 148 12 53 304 117 376 5.37e-25 106
MS.gene30260.t1 MTR_2g005990 33.230 322 154 19 15 304 98 390 5.71e-25 107
MS.gene30260.t1 MTR_3g026920 33.333 273 121 12 66 310 167 406 7.26e-25 106
MS.gene30260.t1 MTR_5g045510 30.189 318 173 13 4 304 82 367 7.55e-25 106
MS.gene30260.t1 MTR_4g039440 29.268 328 193 12 1 304 95 407 1.43e-24 106
MS.gene30260.t1 MTR_7g083740 31.760 233 127 8 91 304 143 362 2.60e-24 104
MS.gene30260.t1 MTR_4g098590 34.444 270 148 12 27 277 95 354 8.53e-24 103
MS.gene30260.t1 MTR_3g099830 31.579 304 160 15 33 304 82 369 1.44e-23 102
MS.gene30260.t1 MTR_7g022105 34.127 252 135 9 67 293 169 414 1.64e-23 103
MS.gene30260.t1 MTR_2g007550 34.694 196 91 7 135 307 152 333 1.70e-23 102
MS.gene30260.t1 MTR_6g022520 28.704 324 195 9 1 304 1 308 2.20e-23 100
MS.gene30260.t1 MTR_7g033940 73.611 72 17 1 419 488 1 72 2.22e-23 98.6
MS.gene30260.t1 MTR_7g033940 50.769 65 30 1 1 65 157 219 7.50e-12 65.5
MS.gene30260.t1 MTR_7g007340 30.980 255 151 8 65 305 110 353 2.31e-23 102
MS.gene30260.t1 MTR_1089s0010 30.395 329 168 15 6 304 77 374 3.62e-23 101
MS.gene30260.t1 MTR_5g083890 29.749 279 157 11 65 315 144 411 4.01e-23 102
MS.gene30260.t1 MTR_3g110010 35.776 232 119 11 40 246 196 422 5.22e-23 103
MS.gene30260.t1 MTR_3g110010 38.194 144 74 5 1 138 76 210 1.46e-13 73.6
MS.gene30260.t1 MTR_5g039490 32.381 315 158 15 8 304 94 371 1.12e-22 100
MS.gene30260.t1 MTR_7g055943 29.781 319 184 12 9 304 115 416 1.27e-22 100
MS.gene30260.t1 MTR_2g007500 33.721 258 129 11 27 256 91 334 5.55e-22 97.4
MS.gene30260.t1 MTR_6g022360 32.530 249 135 9 53 279 140 377 3.79e-21 95.9
MS.gene30260.t1 MTR_2g007360 30.657 274 128 14 73 304 116 369 5.25e-21 95.1
MS.gene30260.t1 MTR_7g075820 30.000 260 148 10 65 304 144 389 7.82e-21 94.7
MS.gene30260.t1 MTR_2g008310 27.692 260 152 9 66 304 122 366 1.18e-20 94.4
MS.gene30260.t1 MTR_1g043170 51.282 78 37 1 224 300 5 82 3.77e-20 85.5
MS.gene30260.t1 MTR_6g029350 31.068 206 116 11 111 304 2 193 4.77e-20 89.7
MS.gene30260.t1 MTR_6g044572 29.392 296 153 13 28 304 125 383 5.00e-20 92.4
MS.gene30260.t1 MTR_3g113785 46.316 95 37 2 181 267 4 92 9.17e-20 84.7
MS.gene30260.t1 MTR_6g044560 29.392 296 153 13 28 304 301 559 9.34e-20 92.8
MS.gene30260.t1 MTR_2g007090 31.602 231 117 11 88 304 86 289 3.38e-19 88.2
MS.gene30260.t1 MTR_3g113770 29.461 241 116 5 31 267 144 334 3.63e-19 89.0
MS.gene30260.t1 MTR_2g008320 29.119 261 149 11 66 304 176 422 4.95e-19 89.7
MS.gene30260.t1 MTR_3g095630 32.948 173 97 7 137 299 12 175 5.74e-18 82.4
MS.gene30260.t1 MTR_1g059860 29.110 292 144 9 26 270 36 311 6.15e-18 85.1
MS.gene30260.t1 MTR_5g073340 33.663 202 105 7 67 246 106 300 1.06e-17 84.3
MS.gene30260.t1 MTR_5g033200 33.533 167 96 7 141 299 13 172 4.09e-17 79.7
MS.gene30260.t1 MTR_5g008910 45.882 85 42 2 221 304 216 297 4.58e-17 82.4
MS.gene30260.t1 MTR_3g071790 30.645 186 103 8 105 271 24 202 5.67e-17 79.7
MS.gene30260.t1 MTR_5g024060 34.711 121 77 1 181 301 82 200 9.30e-17 80.5
MS.gene30260.t1 MTR_7g034090 34.146 164 88 7 150 304 155 307 1.03e-16 82.8
MS.gene30260.t1 MTR_7g056280 40.708 113 54 4 175 277 437 546 1.24e-16 83.2
MS.gene30260.t1 MTR_7g007370 32.812 256 131 10 65 301 96 329 1.36e-16 81.3
MS.gene30260.t1 MTR_1377s0010 33.571 140 81 4 153 292 10 137 1.46e-16 76.6
MS.gene30260.t1 MTR_2g007610 36.496 137 72 4 173 304 20 146 1.59e-16 77.8
MS.gene30260.t1 MTR_3g106960 38.583 127 64 5 181 302 74 191 2.68e-16 79.0
MS.gene30260.t1 MTR_5g065100 30.928 291 145 13 28 306 100 346 3.59e-16 80.9
MS.gene30260.t1 MTR_3g108140 40.000 100 59 1 230 328 68 167 2.62e-15 74.3
MS.gene30260.t1 MTR_8g077460 27.483 302 192 10 10 304 89 370 5.88e-15 77.0
MS.gene30260.t1 MTR_1g108820 29.339 242 118 11 10 220 80 299 6.26e-15 76.6
MS.gene30260.t1 MTR_1g085120 32.995 197 105 7 45 220 279 469 9.31e-15 77.0
MS.gene30260.t1 MTR_4g096730 44.737 76 39 1 230 305 12 84 2.36e-14 69.3
MS.gene30260.t1 MTR_7g056417 39.216 153 69 7 66 198 10 158 4.99e-14 70.1
MS.gene30260.t1 MTR_3g094980 38.372 86 48 1 199 279 34 119 1.35e-13 69.3
MS.gene30260.t1 MTR_7g075800 24.217 351 199 14 36 333 109 445 1.58e-13 73.6
MS.gene30260.t1 MTR_5g076150 32.432 222 112 8 53 242 12 227 5.15e-13 68.9
MS.gene30260.t1 MTR_4g134150 32.203 177 96 8 1 172 73 230 1.78e-12 67.4
MS.gene30260.t1 MTR_7g056447 38.211 123 63 3 1 119 72 185 2.58e-12 67.8
MS.gene30260.t1 MTR_7g022060 41.558 77 44 1 228 303 248 324 1.02e-11 66.6
MS.gene30260.t1 MTR_1g053050 35.366 82 49 1 226 307 36 113 2.29e-11 61.2
MS.gene30260.t1 MTR_4g080590 21.813 353 194 12 24 306 109 449 4.58e-11 65.1
MS.gene30260.t1 MTR_8g014210 30.827 133 76 3 182 304 100 226 7.43e-11 62.8
MS.gene30260.t1 MTR_5g073400 35.088 114 62 3 10 121 7 110 8.19e-11 60.5
MS.gene30260.t1 MTR_7g021930 41.558 77 44 1 228 303 248 324 8.96e-11 63.5
MS.gene30260.t1 MTR_7g021970 41.558 77 44 1 228 303 248 324 8.96e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30260.t1 AT5G56370 28.933 356 179 11 10 304 74 416 5.15e-23 101
MS.gene30260.t1 AT5G56370 28.933 356 179 11 10 304 74 416 5.15e-23 101
MS.gene30260.t1 AT1G32375 27.247 356 187 13 7 304 76 417 9.92e-20 91.7
MS.gene30260.t1 AT1G32375 27.247 356 187 13 7 304 76 417 9.92e-20 91.7
MS.gene30260.t1 AT4G26340 27.353 340 179 13 26 307 88 417 6.58e-14 73.9
MS.gene30260.t1 AT5G56380 33.594 128 79 3 180 304 310 434 6.84e-14 73.9
MS.gene30260.t1 AT5G56380 33.594 128 79 3 180 304 310 434 6.84e-14 73.9
MS.gene30260.t1 AT5G20200 38.686 137 63 7 366 484 620 753 2.83e-12 69.7
MS.gene30260.t1 AT3G26920 27.476 313 177 15 22 304 4 296 6.92e-12 66.6
MS.gene30260.t1 AT5G38565 38.793 116 60 4 195 304 226 336 6.70e-11 64.3
MS.gene30260.t1 AT5G62970 31.579 228 118 8 88 304 244 444 7.66e-11 64.7

Find 118 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACCTTCTTGATGGAAAT+TGG 0.159186 7.3:+64622495 None:intergenic
TTTCATTTCAATAACAAATT+AGG 0.195020 7.3:-64627337 MS.gene30260:CDS
AGTTGAGAAGAAAGACATTT+TGG 0.210832 7.3:+64626613 None:intergenic
TCAAGAAGGTTGAATCAAAA+TGG 0.253051 7.3:-64622485 MS.gene30260:CDS
AACCAATTGTCATACAGTTT+TGG 0.299740 7.3:-64622324 MS.gene30260:CDS
ACAGATGAGGTTGCTGTAAC+AGG 0.300980 7.3:+64622426 None:intergenic
AGCTTATATTCAAATCAAAT+TGG 0.311318 7.3:-64626842 MS.gene30260:CDS
GTTTAAACACTTGCCCAATT+TGG 0.316334 7.3:-64627086 MS.gene30260:CDS
AATGTTTGCTCTGACCAAAT+TGG 0.323622 7.3:+64627072 None:intergenic
ATGGAAATTGGAGCTAAAAC+TGG 0.352239 7.3:+64622507 None:intergenic
CTCCAAAACTGTATGACAAT+TGG 0.361915 7.3:+64622322 None:intergenic
CCTACTCAAAACTCTCCATT+TGG 0.373266 7.3:-64627221 MS.gene30260:CDS
ATGACAGTTAGTGCCTTTCC+AGG 0.374215 7.3:-64626499 MS.gene30260:CDS
GCACCACAGGGCAGCCAGTA+TGG 0.374235 7.3:-64624620 MS.gene30260:intron
CACGAAATATTCAATTTGCT+TGG 0.381703 7.3:-64627036 MS.gene30260:CDS
ATGTTTGCTCTGACCAAATT+GGG 0.383897 7.3:+64627073 None:intergenic
TTCAAAGTACCAAATGCTAA+TGG 0.395151 7.3:-64626467 MS.gene30260:CDS
AAGATAAATCCATTAGCATT+TGG 0.397989 7.3:+64626458 None:intergenic
TATTTCCAACTCTTCTAGAA+TGG 0.411345 7.3:+64627150 None:intergenic
AATCAAATTGGCGTACCAAA+TGG 0.421083 7.3:-64626830 MS.gene30260:CDS
TCTCAAATGTGGTGCCTCTA+GGG 0.425089 7.3:-64627455 MS.gene30260:CDS
TTCTAGCAACCACTCCCATT+TGG 0.429349 7.3:+64626815 None:intergenic
TACTTTGAAGTTAAATCCCC+TGG 0.434558 7.3:+64626481 None:intergenic
TCTTAAGTTGAAAGCATTAG+TGG 0.436067 7.3:-64627272 MS.gene30260:CDS
AAGGGGCAAGGTGGGGTCAC+GGG 0.441252 7.3:+64627489 None:intergenic
GTCATAGAGGATTACCATAC+TGG 0.446729 7.3:+64624606 None:intergenic
GGGAAGGAAAATACTACTGC+TGG 0.447710 7.3:+64622285 None:intergenic
TTCCGCTCCGCTATAGCGGC+CGG 0.450452 7.3:+64625418 None:intergenic
GTCTCAAATGTGGTGCCTCT+AGG 0.451267 7.3:-64627456 MS.gene30260:CDS
CAAAACTCTCCATTTGGAAA+GGG 0.451508 7.3:-64627215 MS.gene30260:CDS
TTACTAGTAGAGAATAATAA+TGG 0.454433 7.3:+64622372 None:intergenic
TAACTTTGGTTCAATCAATA+CGG 0.454469 7.3:-64622217 MS.gene30260:CDS
ATTTCCAACTCTTCTAGAAT+GGG 0.455922 7.3:+64627151 None:intergenic
GGTGGGGTCACGGGCGAGCA+TGG 0.458600 7.3:+64627498 None:intergenic
GGATTTATCTTTGTGTCCAC+GGG 0.458684 7.3:-64626446 MS.gene30260:CDS
CAAGCAAATTGAATATTTCG+TGG 0.460201 7.3:+64627037 None:intergenic
ATCAAATTGGCGTACCAAAT+GGG 0.460382 7.3:-64626829 MS.gene30260:CDS
GCATCGCAACCCTTTCCAAA+TGG 0.461724 7.3:+64627206 None:intergenic
TGGATTTATCTTTGTGTCCA+CGG 0.462692 7.3:-64626447 MS.gene30260:CDS
GAAGGGGCAAGGTGGGGTCA+CGG 0.482084 7.3:+64627488 None:intergenic
GGAGTCATAAAGTATAACTT+TGG 0.484307 7.3:-64622231 MS.gene30260:CDS
ATGGTATTGATGACGATGAT+TGG 0.484330 7.3:-64626654 MS.gene30260:CDS
CAAGAAGGTTGAATCAAAAT+GGG 0.488341 7.3:-64622484 MS.gene30260:CDS
AGCTCCAATTTCCATCAAGA+AGG 0.488406 7.3:-64622499 MS.gene30260:CDS
AAAATCAAGACCACCGCACC+AGG 0.488476 7.3:-64625396 MS.gene30260:CDS
AAAGATTGAAGGGGCAAGGT+GGG 0.489746 7.3:+64627481 None:intergenic
CTCTAGGGGATGGGACCCAC+TGG 0.491852 7.3:-64627440 MS.gene30260:CDS
ACCAATCGATTGATATCCAG+TGG 0.502266 7.3:+64627424 None:intergenic
ATTATCAACTGTATTGCTTG+TGG 0.503420 7.3:+64622260 None:intergenic
TCAACTGTATTGCTTGTGGA+AGG 0.503607 7.3:+64622264 None:intergenic
TGTCATTGTGCGCAGTAAGT+TGG 0.507051 7.3:+64626516 None:intergenic
ATTTGAGACGGAAAGATTGA+AGG 0.508295 7.3:+64627470 None:intergenic
AGTAGGGGAAAATCGATTTG+AGG 0.510436 7.3:+64627238 None:intergenic
AATGTGGTGCCTCTAGGGGA+TGG 0.511661 7.3:-64627450 MS.gene30260:CDS
GTTTCTAGAATTGAAAATTG+TGG 0.512806 7.3:+64627303 None:intergenic
AGGAACTCAGAATTTCATCC+TGG 0.513315 7.3:-64627383 MS.gene30260:CDS
TCAAAACTCTCCATTTGGAA+AGG 0.519588 7.3:-64627216 MS.gene30260:CDS
AAAGGATACTGACCAACACT+TGG 0.520053 7.3:+64622576 None:intergenic
AGCCGCGCCGGCCGCTATAG+CGG 0.530936 7.3:-64625425 MS.gene30260:CDS
CCACCATACCGGCCGCCTTG+TGG 0.536002 7.3:+64624579 None:intergenic
CAATCTTTCCGTCTCAAATG+TGG 0.536588 7.3:-64627466 MS.gene30260:CDS
AATACAGTTGATAATGATGC+TGG 0.536609 7.3:-64622252 MS.gene30260:CDS
TTGATGGCTCTCCCAAGTGT+TGG 0.538692 7.3:-64622588 MS.gene30260:CDS
TGAAACGCACCGATGTGGCC+TGG 0.540102 7.3:+64625378 None:intergenic
CATAATTACAACCTTGTGAA+GGG 0.546984 7.3:+64626758 None:intergenic
TGACAGTTAGTGCCTTTCCA+GGG 0.550399 7.3:-64626498 MS.gene30260:CDS
TTTGAGACGGAAAGATTGAA+GGG 0.552308 7.3:+64627471 None:intergenic
GTGTCCCATTCTAGAAGAGT+TGG 0.553838 7.3:-64627155 MS.gene30260:CDS
AGAGAATAATAATGGCATGA+TGG 0.558478 7.3:+64622380 None:intergenic
ATGTGGTGCCTCTAGGGGAT+GGG 0.560683 7.3:-64627449 MS.gene30260:CDS
CAGATGAGGTTGCTGTAACA+GGG 0.562402 7.3:+64622427 None:intergenic
ACATAATTACAACCTTGTGA+AGG 0.564334 7.3:+64626757 None:intergenic
GGCATGATGGATGGTGTTGG+CGG 0.565187 7.3:+64622393 None:intergenic
CCCACTGGATATCAATCGAT+TGG 0.565331 7.3:-64627425 MS.gene30260:CDS
TTAGCATCAGATAACAGCTC+GGG 0.565576 7.3:-64622459 MS.gene30260:CDS
TGACGGCACCACAAGGCGGC+CGG 0.566780 7.3:-64624587 MS.gene30260:intron
GTTGTCAAAAGCAGCCGCGC+CGG 0.568060 7.3:-64625437 MS.gene30260:CDS
ACCGATGTGGCCTGGTGCGG+TGG 0.570351 7.3:+64625386 None:intergenic
CTCAAATGTGGTGCCTCTAG+GGG 0.573015 7.3:-64627454 MS.gene30260:CDS
TGAAGTTAAATCCCCTGGAA+AGG 0.575046 7.3:+64626486 None:intergenic
GCCTTGTGGTGCCGTCATAG+AGG 0.575347 7.3:+64624593 None:intergenic
TGTATTGCTTGTGGAAGGGA+AGG 0.576233 7.3:+64622269 None:intergenic
TTTCAATTCTAGAAACCTTG+TGG 0.578779 7.3:-64627296 MS.gene30260:CDS
CGAGCTGTTATCTGATGCTA+AGG 0.580087 7.3:+64622461 None:intergenic
CAACTGTATTGCTTGTGGAA+GGG 0.580179 7.3:+64622265 None:intergenic
ACGGAAAGATTGAAGGGGCA+AGG 0.584230 7.3:+64627477 None:intergenic
TCCTCTATGACGGCACCACA+AGG 0.590284 7.3:-64624594 MS.gene30260:CDS
CGCACCGATGTGGCCTGGTG+CGG 0.590434 7.3:+64625383 None:intergenic
CGCCGGCCGCTATAGCGGAG+CGG 0.593276 7.3:-64625420 MS.gene30260:CDS
ACCACCGCACCAGGCCACAT+CGG 0.597611 7.3:-64625387 MS.gene30260:intron
CTCCGCTATAGCGGCCGGCG+CGG 0.599743 7.3:+64625423 None:intergenic
GACAGTTAGTGCCTTTCCAG+GGG 0.601666 7.3:-64626497 MS.gene30260:CDS
AATAATAATGGCATGATGGA+TGG 0.603855 7.3:+64622384 None:intergenic
CTTAGCATCAGATAACAGCT+CGG 0.605795 7.3:-64622460 MS.gene30260:CDS
GAAAGATTGAAGGGGCAAGG+TGG 0.606570 7.3:+64627480 None:intergenic
TCAAAATCTTACCCTTCACA+AGG 0.613722 7.3:-64626769 MS.gene30260:intron
CTTTCAACTTAAGAACCACA+AGG 0.615571 7.3:+64627281 None:intergenic
CGGCCTGAAACGCACCGATG+TGG 0.616938 7.3:+64625373 None:intergenic
AGCTAAAACTGGTTTACTAG+CGG 0.629695 7.3:+64622518 None:intergenic
TGAGGTTGCTGTAACAGGGA+AGG 0.630659 7.3:+64622431 None:intergenic
AAGGATACTGACCAACACTT+GGG 0.630894 7.3:+64622577 None:intergenic
AAGATTGAAGGGGCAAGGTG+GGG 0.631819 7.3:+64627482 None:intergenic
GTTCGCGCTGCTGTGCAAAG+AGG 0.632333 7.3:-64627403 MS.gene30260:CDS
TTGGTTCAATCAATACGGCA+AGG 0.634106 7.3:-64622212 MS.gene30260:CDS
CGGTTCAGAGAATACAGATG+AGG 0.639277 7.3:+64622413 None:intergenic
CTGGATTTGAGTAAAACTCG+TGG 0.643658 7.3:-64627364 MS.gene30260:CDS
TAGAGGCACCACATTTGAGA+CGG 0.651779 7.3:+64627458 None:intergenic
ATTGGCGTACCAAATGGGAG+TGG 0.652622 7.3:-64626824 MS.gene30260:CDS
AGTATGGTAATCCTCTATGA+CGG 0.656155 7.3:-64624604 MS.gene30260:CDS
AATGGCATGATGGATGGTGT+TGG 0.659198 7.3:+64622390 None:intergenic
CAGTGGGTCCCATCCCCTAG+AGG 0.667923 7.3:+64627441 None:intergenic
TTGAGACGGAAAGATTGAAG+GGG 0.673595 7.3:+64627472 None:intergenic
TGCTCGCTTATAGATTACAA+AGG 0.676743 7.3:-64626583 MS.gene30260:CDS
ACTAGCGGCATTATTAGCGA+CGG 0.683042 7.3:+64622533 None:intergenic
CCAATCGATTGATATCCAGT+GGG 0.697481 7.3:+64627425 None:intergenic
TTACATGTCGGAGAGCCCCG+TGG 0.701896 7.3:+64626430 None:intergenic
GATTTATCTTTGTGTCCACG+GGG 0.728742 7.3:-64626445 MS.gene30260:CDS
TCTATGACGGCACCACAAGG+CGG 0.740486 7.3:-64624591 MS.gene30260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAATATGAAATAAAA+GGG + chr7.3:64624430-64624449 None:intergenic 10.0%
!! TAATATCTACAAAAAAAAAA+AGG + chr7.3:64626029-64626048 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG + chr7.3:64624431-64624450 None:intergenic 10.0%
!!! TTTATCTTTTTACATAATTA+AGG - chr7.3:64624715-64624734 MS.gene30260:intron 10.0%
!!! TTTTTTTTTTTTGAATAGTA+TGG - chr7.3:64624494-64624513 MS.gene30260:intron 10.0%
!! CAAAAAACTTATTTGAAAAT+TGG + chr7.3:64623718-64623737 None:intergenic 15.0%
!! CTAATATAACATTAGAAAAT+AGG + chr7.3:64623313-64623332 None:intergenic 15.0%
!! TTTCATTTCAATAACAAATT+AGG - chr7.3:64622332-64622351 MS.gene30260:CDS 15.0%
!!! ACATAATGTTACTTATATAT+TGG + chr7.3:64626085-64626104 None:intergenic 15.0%
!!! ATTATTCATTTTGTTTACTT+TGG + chr7.3:64626726-64626745 None:intergenic 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG + chr7.3:64624360-64624379 None:intergenic 15.0%
!!! TGGTTTTTTATAAAACATTA+TGG - chr7.3:64626794-64626813 MS.gene30260:CDS 15.0%
!!! TTGTTATAATGAATTTTACA+GGG - chr7.3:64626910-64626929 MS.gene30260:intron 15.0%
!!! TTTGTTATAATGAATTTTAC+AGG - chr7.3:64626909-64626928 MS.gene30260:intron 15.0%
!! AAAGTACAATAATCGTATTA+GGG - chr7.3:64623427-64623446 MS.gene30260:intron 20.0%
!! ACGATAAACTAGATATATAA+GGG - chr7.3:64626939-64626958 MS.gene30260:intron 20.0%
!! AGCTTATATTCAAATCAAAT+TGG - chr7.3:64622827-64622846 MS.gene30260:intron 20.0%
!! AGGGAATTAATTAAGTTTAT+GGG - chr7.3:64625530-64625549 MS.gene30260:intron 20.0%
!! ATTAATGAACATGTTTATTG+TGG - chr7.3:64624775-64624794 MS.gene30260:intron 20.0%
!! ATTGAGACTATTATTATGAA+TGG - chr7.3:64624128-64624147 MS.gene30260:intron 20.0%
!! TAAATGCAAAAAATATTGCA+TGG - chr7.3:64626678-64626697 MS.gene30260:intron 20.0%
!! TCTGGTATTAAATTTATTAG+TGG - chr7.3:64624519-64624538 MS.gene30260:intron 20.0%
!! TTACTAGTAGAGAATAATAA+TGG + chr7.3:64627300-64627319 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG - chr7.3:64624380-64624399 MS.gene30260:intron 20.0%
!!! AAAAGTACAATAATCGTATT+AGG - chr7.3:64623426-64623445 MS.gene30260:intron 20.0%
!!! AACATATTTTTAACTTAGAG+AGG + chr7.3:64624165-64624184 None:intergenic 20.0%
!!! ATGAAATTTTCTTCTTTACT+AGG - chr7.3:64625307-64625326 MS.gene30260:intron 20.0%
!!! ATGATAATATGACTTTTATG+TGG - chr7.3:64626122-64626141 MS.gene30260:intron 20.0%
!!! ATTAATGAGTGATTTTTTGT+CGG - chr7.3:64625996-64626015 MS.gene30260:intron 20.0%
!!! GAAATTTTGAGTAATGTTTA+AGG - chr7.3:64624457-64624476 MS.gene30260:intron 20.0%
!!! GCATTACAATTTTTTTTACT+AGG - chr7.3:64625175-64625194 MS.gene30260:intron 20.0%
!!! TTCTTTTCTTGATTTACTAA+AGG + chr7.3:64627114-64627133 None:intergenic 20.0%
! AAACATTACGTTCATGAAAT+AGG + chr7.3:64627035-64627054 None:intergenic 25.0%
! AAAGAACAGTTAACAAAAGT+CGG + chr7.3:64624075-64624094 None:intergenic 25.0%
! AAATCTTTAGTTGTGTATTC+AGG + chr7.3:64624649-64624668 None:intergenic 25.0%
! AACAAAAACAATTATCAGCA+AGG + chr7.3:64623774-64623793 None:intergenic 25.0%
! AAGATAAATCCATTAGCATT+TGG + chr7.3:64623214-64623233 None:intergenic 25.0%
! AAGGTGTGTTTATACATTAT+AGG + chr7.3:64626607-64626626 None:intergenic 25.0%
! AATAAAACTTACCTGAAAGT+TGG + chr7.3:64623993-64624012 None:intergenic 25.0%
! AGGTGTGTTTATACATTATA+GGG + chr7.3:64626606-64626625 None:intergenic 25.0%
! ATAATGAGAAACTATCAAGA+AGG - chr7.3:64626741-64626760 MS.gene30260:intron 25.0%
! ATACATAAGTGTCTTGTAAA+AGG - chr7.3:64625663-64625682 MS.gene30260:intron 25.0%
! ATCTAGAGATTAATGAATTG+GGG - chr7.3:64626764-64626783 MS.gene30260:intron 25.0%
! ATGAATGAAAGTTTACATGT+CGG + chr7.3:64623254-64623273 None:intergenic 25.0%
! ATGCAATAATATCAATGTGA+TGG - chr7.3:64623342-64623361 MS.gene30260:intron 25.0%
! CACTTGCTTAACTAATTTAA+TGG - chr7.3:64625230-64625249 MS.gene30260:intron 25.0%
! CATTAAATTAGTTAAGCAAG+TGG + chr7.3:64625232-64625251 None:intergenic 25.0%
! GAATGTTTGACTATAGAAAA+AGG - chr7.3:64625932-64625951 MS.gene30260:intron 25.0%
! GACGATAAACTAGATATATA+AGG - chr7.3:64626938-64626957 MS.gene30260:intron 25.0%
! GAGGGAATTAATTAAGTTTA+TGG - chr7.3:64625529-64625548 MS.gene30260:intron 25.0%
! GATCTAGAGATTAATGAATT+GGG - chr7.3:64626763-64626782 MS.gene30260:intron 25.0%
! GTGACAAGTAATAAAAAACA+CGG + chr7.3:64624103-64624122 None:intergenic 25.0%
! TATTAGGGTTTGTATTGTAT+TGG - chr7.3:64623442-64623461 MS.gene30260:intron 25.0%
! TGCAATTACTATGAACTTAT+TGG + chr7.3:64625848-64625867 None:intergenic 25.0%
! TTCATTCATTTGATTGAAGA+AGG - chr7.3:64623265-64623284 MS.gene30260:intron 25.0%
! TTTCAATATGAACTTAGTGA+TGG + chr7.3:64623867-64623886 None:intergenic 25.0%
!! AATATAGGAAGTATAGGATA+AGG - chr7.3:64625598-64625617 MS.gene30260:intron 25.0%
!! TAACTTTGGTTCAATCAATA+CGG - chr7.3:64627452-64627471 MS.gene30260:CDS 25.0%
!! TTTTCATAACTTAACTCACA+TGG - chr7.3:64622804-64622823 MS.gene30260:intron 25.0%
!! TTTTTGAATAGTATGGTATC+TGG - chr7.3:64624501-64624520 MS.gene30260:intron 25.0%
!!! AATACAGTGTTTTTGAATGT+CGG - chr7.3:64624934-64624953 MS.gene30260:intron 25.0%
!!! ACTTTCAGGTAAGTTTTATT+AGG - chr7.3:64623993-64624012 MS.gene30260:intron 25.0%
!!! ATATTTTTTGCATTTAGTCC+TGG + chr7.3:64626674-64626693 None:intergenic 25.0%
!!! ATTCTTTTGAAAGATGGTAT+TGG - chr7.3:64622557-64622576 MS.gene30260:CDS 25.0%
!!! CTATGTATTCTTTTGAAAGA+TGG - chr7.3:64622551-64622570 MS.gene30260:CDS 25.0%
!!! GTCAAACATTCATTTTTCTA+CGG + chr7.3:64625923-64625942 None:intergenic 25.0%
!!! GTTTCTAGAATTGAAAATTG+TGG + chr7.3:64622369-64622388 None:intergenic 25.0%
!!! TGAATTTTTTTTATCATGCG+AGG - chr7.3:64625800-64625819 MS.gene30260:intron 25.0%
AAAACAATTATCAGCAAGGA+AGG + chr7.3:64623770-64623789 None:intergenic 30.0%
AACATACACCAAATAATACC+AGG - chr7.3:64626653-64626672 MS.gene30260:CDS 30.0%
ACAATGGAAAATTGACAATG+TGG - chr7.3:64624877-64624896 MS.gene30260:intron 30.0%
ACATAATTACAACCTTGTGA+AGG + chr7.3:64622915-64622934 None:intergenic 30.0%
ACATGTTTATTGTGGACATA+TGG - chr7.3:64624783-64624802 MS.gene30260:intron 30.0%
AGAGAATAATAATGGCATGA+TGG + chr7.3:64627292-64627311 None:intergenic 30.0%
AGTAACTTTCAGCAGAAATT+AGG - chr7.3:64625881-64625900 MS.gene30260:intron 30.0%
ATTATCAACTGTATTGCTTG+TGG + chr7.3:64627412-64627431 None:intergenic 30.0%
ATTTATGTTTCGGAATATGG+TGG - chr7.3:64626531-64626550 MS.gene30260:CDS 30.0%
CAAGAAGGTTGAATCAAAAT+GGG - chr7.3:64627185-64627204 MS.gene30260:CDS 30.0%
CAAGCAAATTGAATATTTCG+TGG + chr7.3:64622635-64622654 None:intergenic 30.0%
CATAATTACAACCTTGTGAA+GGG + chr7.3:64622914-64622933 None:intergenic 30.0%
CATTTAGTCCTGGTATTATT+TGG + chr7.3:64626664-64626683 None:intergenic 30.0%
CGAATTTATGTTTCGGAATA+TGG - chr7.3:64626528-64626547 MS.gene30260:CDS 30.0%
CTTCAACTTAATGTAACTCT+AGG + chr7.3:64622723-64622742 None:intergenic 30.0%
GGAGTCATAAAGTATAACTT+TGG - chr7.3:64627438-64627457 MS.gene30260:CDS 30.0%
GGATCTAGAGATTAATGAAT+TGG - chr7.3:64626762-64626781 MS.gene30260:intron 30.0%
GTATGGGATGTAGAATAAAT+GGG - chr7.3:64625439-64625458 MS.gene30260:CDS 30.0%
GTGTATGTTCAAAACTCAAA+TGG + chr7.3:64626642-64626661 None:intergenic 30.0%
GTTGGAAATGTTATCAAACA+AGG - chr7.3:64625711-64625730 MS.gene30260:intron 30.0%
TATAGGATAAGGCTATGTTT+GGG - chr7.3:64625609-64625628 MS.gene30260:intron 30.0%
TCAAGAAGGTTGAATCAAAA+TGG - chr7.3:64627184-64627203 MS.gene30260:CDS 30.0%
TCATTTGATTGAAGAAGGTT+AGG - chr7.3:64623270-64623289 MS.gene30260:intron 30.0%
TTGTATTTATAGCCCTCTAT+GGG - chr7.3:64623491-64623510 MS.gene30260:intron 30.0%
TTTATTGTGGACATATGGAA+TGG - chr7.3:64624788-64624807 MS.gene30260:intron 30.0%
! AAAGTTTTTGCGTTTAGAAG+TGG - chr7.3:64622667-64622686 MS.gene30260:intron 30.0%
! AACCAATTGTCATACAGTTT+TGG - chr7.3:64627345-64627364 MS.gene30260:CDS 30.0%
! AATAATAATGGCATGATGGA+TGG + chr7.3:64627288-64627307 None:intergenic 30.0%
! AGTTGAGAAGAAAGACATTT+TGG + chr7.3:64623059-64623078 None:intergenic 30.0%
! ATTACACCGACGTATATTTT+GGG - chr7.3:64626045-64626064 MS.gene30260:intron 30.0%
! CACGAAATATTCAATTTGCT+TGG - chr7.3:64622633-64622652 MS.gene30260:intron 30.0%
! CTTTTATGTGGTGAAACTAA+TGG - chr7.3:64626134-64626153 MS.gene30260:intron 30.0%
! GCTAGAAATATAGGAAGTAT+AGG - chr7.3:64625592-64625611 MS.gene30260:intron 30.0%
! TAGTCTTTTGAATGAGTGTA+GGG - chr7.3:64623949-64623968 MS.gene30260:intron 30.0%
! TATTACACCGACGTATATTT+TGG - chr7.3:64626044-64626063 MS.gene30260:intron 30.0%
! TATTTCCAACTCTTCTAGAA+TGG + chr7.3:64622522-64622541 None:intergenic 30.0%
! TGCGTTTAAAATGACGATAA+AGG - chr7.3:64626313-64626332 MS.gene30260:intron 30.0%
! TTCAAAGTACCAAATGCTAA+TGG - chr7.3:64623202-64623221 MS.gene30260:intron 30.0%
! TTTCAATTCTAGAAACCTTG+TGG - chr7.3:64622373-64622392 MS.gene30260:CDS 30.0%
!! AATACAGTTGATAATGATGC+TGG - chr7.3:64627417-64627436 MS.gene30260:CDS 30.0%
!! ACTTCCTATATTTCTAGCAT+AGG + chr7.3:64625590-64625609 None:intergenic 30.0%
!! AGATTTTGATAAGCTTATCG+AGG - chr7.3:64622490-64622509 MS.gene30260:CDS 30.0%
!! ATTTCCAACTCTTCTAGAAT+GGG + chr7.3:64622521-64622540 None:intergenic 30.0%
!! ATTTTGATAAGCTTATCGAG+GGG - chr7.3:64622492-64622511 MS.gene30260:CDS 30.0%
!! GATTTTGATAAGCTTATCGA+GGG - chr7.3:64622491-64622510 MS.gene30260:CDS 30.0%
!! TCTTAAGTTGAAAGCATTAG+TGG - chr7.3:64622397-64622416 MS.gene30260:CDS 30.0%
!! TTTTGATTCAACCTTCTTGA+TGG + chr7.3:64627184-64627203 None:intergenic 30.0%
!!! AACACTTATTTTGAGCATCT+TGG - chr7.3:64626381-64626400 MS.gene30260:intron 30.0%
!!! AGACATTTTGGAACAATTTG+TGG + chr7.3:64623047-64623066 None:intergenic 30.0%
!!! AGGGTAAGATTTTGAAGTTT+AGG + chr7.3:64622895-64622914 None:intergenic 30.0%
!!! ATAGGGGTATTTTGGTATTT+AGG - chr7.3:64623544-64623563 MS.gene30260:intron 30.0%
!!! GGGTAAGATTTTGAAGTTTA+GGG + chr7.3:64622894-64622913 None:intergenic 30.0%
AAGATAGAGATGAATAGGCA+TGG - chr7.3:64626460-64626479 MS.gene30260:CDS 35.0%
AAGGCCTATGCTAGAAATAT+AGG - chr7.3:64625583-64625602 MS.gene30260:intron 35.0%
AATCAAATTGGCGTACCAAA+TGG - chr7.3:64622839-64622858 MS.gene30260:intron 35.0%
AATGTTTGCTCTGACCAAAT+TGG + chr7.3:64622600-64622619 None:intergenic 35.0%
AATTGCTCACTCTCTAATGT+AGG - chr7.3:64624030-64624049 MS.gene30260:intron 35.0%
ACTATGAACTTATTGGAACC+TGG + chr7.3:64625841-64625860 None:intergenic 35.0%
AGCTCAACGAAATAGCTATA+TGG - chr7.3:64625961-64625980 MS.gene30260:intron 35.0%
AGGAGAAGATAGAGATGAAT+AGG - chr7.3:64626455-64626474 MS.gene30260:CDS 35.0%
AGGCACAAAAGAAAATAACC+AGG - chr7.3:64625820-64625839 MS.gene30260:intron 35.0%
AGTATGGTAATCCTCTATGA+CGG - chr7.3:64625065-64625084 MS.gene30260:intron 35.0%
ATAGGATAAGGCTATGTTTG+GGG - chr7.3:64625610-64625629 MS.gene30260:intron 35.0%
ATCAAATTGGCGTACCAAAT+GGG - chr7.3:64622840-64622859 MS.gene30260:intron 35.0%
ATGGAAATTGGAGCTAAAAC+TGG + chr7.3:64627165-64627184 None:intergenic 35.0%
ATGTTTGCTCTGACCAAATT+GGG + chr7.3:64622599-64622618 None:intergenic 35.0%
ATTCATCTCTATCTTCTCCT+AGG + chr7.3:64626455-64626474 None:intergenic 35.0%
ATTGCTCACTCTCTAATGTA+GGG - chr7.3:64624031-64624050 MS.gene30260:intron 35.0%
CAAAACTCTCCATTTGGAAA+GGG - chr7.3:64622454-64622473 MS.gene30260:CDS 35.0%
CAATATACACGTCACTTGTT+TGG - chr7.3:64626411-64626430 MS.gene30260:intron 35.0%
CATTACGTTCATGAAATAGG+AGG + chr7.3:64627032-64627051 None:intergenic 35.0%
CTCCAAAACTGTATGACAAT+TGG + chr7.3:64627350-64627369 None:intergenic 35.0%
CTGAGGTTGCAAAAATTGAA+GGG - chr7.3:64626276-64626295 MS.gene30260:intron 35.0%
CTTTCAACTTAAGAACCACA+AGG + chr7.3:64622391-64622410 None:intergenic 35.0%
GGACTGATTAGTGATTACTT+AGG - chr7.3:64623512-64623531 MS.gene30260:intron 35.0%
GGTATGGGATGTAGAATAAA+TGG - chr7.3:64625438-64625457 MS.gene30260:CDS 35.0%
GTATAGGATAAGGCTATGTT+TGG - chr7.3:64625608-64625627 MS.gene30260:intron 35.0%
GTTGTATTTATAGCCCTCTA+TGG - chr7.3:64623490-64623509 MS.gene30260:intron 35.0%
GTTTAAACACTTGCCCAATT+TGG - chr7.3:64622583-64622602 MS.gene30260:CDS 35.0%
TAATAGAGGCAGAAACAAGA+GGG - chr7.3:64625511-64625530 MS.gene30260:intron 35.0%
TAATGAATTGGGGAAAGACA+TGG - chr7.3:64626774-64626793 MS.gene30260:CDS 35.0%
TAATGGCCTAAAACAGTTGA+GGG - chr7.3:64625247-64625266 MS.gene30260:intron 35.0%
TACTATTTATAGGTCCGCTT+TGG + chr7.3:64624350-64624369 None:intergenic 35.0%
TACTTAGGCAGCAAGTAATA+GGG - chr7.3:64623527-64623546 MS.gene30260:intron 35.0%
TAGAGAGTGAGCAATTCAAT+TGG + chr7.3:64624026-64624045 None:intergenic 35.0%
TCAAAACTCTCCATTTGGAA+AGG - chr7.3:64622453-64622472 MS.gene30260:CDS 35.0%
TCAAAATCTTACCCTTCACA+AGG - chr7.3:64622900-64622919 MS.gene30260:intron 35.0%
TCAACCTTCTTGATGGAAAT+TGG + chr7.3:64627177-64627196 None:intergenic 35.0%
TGCTCGCTTATAGATTACAA+AGG - chr7.3:64623086-64623105 MS.gene30260:intron 35.0%
TGGATTTATCTTTGTGTCCA+CGG - chr7.3:64623222-64623241 MS.gene30260:intron 35.0%
TGTTCATTAATCAGCGTACA+AGG + chr7.3:64624766-64624785 None:intergenic 35.0%
TTAATGGCCTAAAACAGTTG+AGG - chr7.3:64625246-64625265 MS.gene30260:intron 35.0%
TTACTTAGGCAGCAAGTAAT+AGG - chr7.3:64623526-64623545 MS.gene30260:intron 35.0%
TTTCGACCCAAAATATACGT+CGG + chr7.3:64626054-64626073 None:intergenic 35.0%
! AGCTAAAACTGGTTTACTAG+CGG + chr7.3:64627154-64627173 None:intergenic 35.0%
! ATTTGAGACGGAAAGATTGA+AGG + chr7.3:64622202-64622221 None:intergenic 35.0%
! CAAATGGACTCAAACAAAGA+AGG + chr7.3:64626626-64626645 None:intergenic 35.0%
! GTAGTCTTTTGAATGAGTGT+AGG - chr7.3:64623948-64623967 MS.gene30260:intron 35.0%
! TAAATATCGGCTGATGTTGT+AGG - chr7.3:64625000-64625019 MS.gene30260:intron 35.0%
! TCTGAGGTTGCAAAAATTGA+AGG - chr7.3:64626275-64626294 MS.gene30260:intron 35.0%
! TGCACTTTGTTTCATTAGCT+AGG - chr7.3:64623376-64623395 MS.gene30260:intron 35.0%
! TTTGAGACGGAAAGATTGAA+GGG + chr7.3:64622201-64622220 None:intergenic 35.0%
! TTTTGATGTACTAACTGTGC+AGG - chr7.3:64627053-64627072 MS.gene30260:CDS 35.0%
!! ATGGTATTGATGACGATGAT+TGG - chr7.3:64623015-64623034 MS.gene30260:intron 35.0%
!! TACTTTGAAGTTAAATCCCC+TGG + chr7.3:64623191-64623210 None:intergenic 35.0%
!! TGGATATTGGTGGCTATTTT+TGG - chr7.3:64624963-64624982 MS.gene30260:intron 35.0%
!! TTTTGACAGCTTTATGGACA+TGG - chr7.3:64622996-64623015 MS.gene30260:intron 35.0%
!!! AAATGGAGAGTTTTGAGTAG+GGG + chr7.3:64622449-64622468 None:intergenic 35.0%
!!! AGCAAGTAATAGGGGTATTT+TGG - chr7.3:64623536-64623555 MS.gene30260:intron 35.0%
!!! CAAATGGAGAGTTTTGAGTA+GGG + chr7.3:64622450-64622469 None:intergenic 35.0%
!!! GGATATTGGTGGCTATTTTT+GGG - chr7.3:64624964-64624983 MS.gene30260:intron 35.0%
!!! TGCTGATTTTGACAGCTTTA+TGG - chr7.3:64622990-64623009 MS.gene30260:intron 35.0%
AAAGGATACTGACCAACACT+TGG + chr7.3:64627096-64627115 None:intergenic 40.0%
AAGGATACTGACCAACACTT+GGG + chr7.3:64627095-64627114 None:intergenic 40.0%
AAGGGACAGCAAAATCGAAA+TGG + chr7.3:64624412-64624431 None:intergenic 40.0%
ACATCAGCCGATATTTACCA+TGG + chr7.3:64624997-64625016 None:intergenic 40.0%
ACCAATCGATTGATATCCAG+TGG + chr7.3:64622248-64622267 None:intergenic 40.0%
ACTTAGGCAGCAAGTAATAG+GGG - chr7.3:64623528-64623547 MS.gene30260:intron 40.0%
AGCAAGGAAGGAAATTTCAC+AGG + chr7.3:64623758-64623777 None:intergenic 40.0%
AGCTCCAATTTCCATCAAGA+AGG - chr7.3:64627170-64627189 MS.gene30260:CDS 40.0%
AGGAAATTTCACAGGTTTGG+AGG + chr7.3:64623750-64623769 None:intergenic 40.0%
AGGAACTCAGAATTTCATCC+TGG - chr7.3:64622286-64622305 MS.gene30260:CDS 40.0%
ATCACTAATCAGTCCCATAG+AGG + chr7.3:64623507-64623526 None:intergenic 40.0%
ATCACTACTCATCACTAGCT+AGG - chr7.3:64622697-64622716 MS.gene30260:intron 40.0%
CAACAGTACGACAATGCATT+AGG - chr7.3:64623926-64623945 MS.gene30260:intron 40.0%
CAACTGTATTGCTTGTGGAA+GGG + chr7.3:64627407-64627426 None:intergenic 40.0%
CAATCTTTCCGTCTCAAATG+TGG - chr7.3:64622203-64622222 MS.gene30260:CDS 40.0%
CATCAGCCGATATTTACCAT+GGG + chr7.3:64624996-64625015 None:intergenic 40.0%
CCAATCGATTGATATCCAGT+GGG + chr7.3:64622247-64622266 None:intergenic 40.0%
CCTACTCAAAACTCTCCATT+TGG - chr7.3:64622448-64622467 MS.gene30260:CDS 40.0%
CCTATGCTAGTATAGGGTAT+GGG - chr7.3:64625423-64625442 MS.gene30260:CDS 40.0%
CGCTATCGTCTTCAATAAGA+AGG + chr7.3:64626504-64626523 None:intergenic 40.0%
CTAATAGAGGCAGAAACAAG+AGG - chr7.3:64625510-64625529 MS.gene30260:intron 40.0%
CTAATGCATTGTCGTACTGT+TGG + chr7.3:64623928-64623947 None:intergenic 40.0%
CTGCAAGTGACAACTAATAG+AGG - chr7.3:64625497-64625516 MS.gene30260:intron 40.0%
CTGGATTTGAGTAAAACTCG+TGG - chr7.3:64622305-64622324 MS.gene30260:CDS 40.0%
CTTAGCATCAGATAACAGCT+CGG - chr7.3:64627209-64627228 MS.gene30260:CDS 40.0%
CTTGTAAAAGGACTGTTGCT+GGG - chr7.3:64625675-64625694 MS.gene30260:intron 40.0%
GATTTATCTTTGTGTCCACG+GGG - chr7.3:64623224-64623243 MS.gene30260:intron 40.0%
GCGACGTCGAATTTATGTTT+CGG - chr7.3:64626521-64626540 MS.gene30260:CDS 40.0%
GCTATGTTTGGGGGAAATAT+AGG - chr7.3:64625620-64625639 MS.gene30260:intron 40.0%
GGAAGGAAATTTCACAGGTT+TGG + chr7.3:64623753-64623772 None:intergenic 40.0%
GGATTTATCTTTGTGTCCAC+GGG - chr7.3:64623223-64623242 MS.gene30260:intron 40.0%
GGTATTTAGGTGTGTTCTAG+AGG - chr7.3:64623557-64623576 MS.gene30260:intron 40.0%
GGTCAATATCAGTCTCATTG+CGG - chr7.3:64625150-64625169 MS.gene30260:intron 40.0%
GGTCCTTAGGAATACATTGA+CGG - chr7.3:64623691-64623710 MS.gene30260:intron 40.0%
GTATCCACTTATGTGAGTGT+TGG - chr7.3:64625278-64625297 MS.gene30260:intron 40.0%
GTCATAGAGGATTACCATAC+TGG + chr7.3:64625066-64625085 None:intergenic 40.0%
GTTAGCTAGTACCAACTTTC+AGG - chr7.3:64623979-64623998 MS.gene30260:intron 40.0%
GTTTGGGGGAAATATAGGTA+AGG - chr7.3:64625625-64625644 MS.gene30260:intron 40.0%
TAGGATAAGGCTATGTTTGG+GGG - chr7.3:64625611-64625630 MS.gene30260:intron 40.0%
TATCCATGCTTATTGCTGTC+AGG - chr7.3:64623802-64623821 MS.gene30260:intron 40.0%
TCAACTGTATTGCTTGTGGA+AGG + chr7.3:64627408-64627427 None:intergenic 40.0%
TCACTAATCAGTCCCATAGA+GGG + chr7.3:64623506-64623525 None:intergenic 40.0%
TCATCCAACACTCACATAAG+TGG + chr7.3:64625285-64625304 None:intergenic 40.0%
TCTTGTAAAAGGACTGTTGC+TGG - chr7.3:64625674-64625693 MS.gene30260:intron 40.0%
TGAAGTTAAATCCCCTGGAA+AGG + chr7.3:64623186-64623205 None:intergenic 40.0%
TGTCAAGTGAAACATGTCTG+AGG - chr7.3:64626259-64626278 MS.gene30260:intron 40.0%
TTAGCATCAGATAACAGCTC+GGG - chr7.3:64627210-64627229 MS.gene30260:CDS 40.0%
TTGAGACGGAAAGATTGAAG+GGG + chr7.3:64622200-64622219 None:intergenic 40.0%
TTGGTTCAATCAATACGGCA+AGG - chr7.3:64627457-64627476 MS.gene30260:CDS 40.0%
! AACCAACCCTCAACTGTTTT+AGG + chr7.3:64625256-64625275 None:intergenic 40.0%
! AGGTTTCTAGAAGCCATAAG+AGG - chr7.3:64623577-64623596 MS.gene30260:intron 40.0%
! CAAAAATTGAAGGGCGTGTT+AGG - chr7.3:64626285-64626304 MS.gene30260:intron 40.0%
! CACGAGTTTTACTCAAATCC+AGG + chr7.3:64622307-64622326 None:intergenic 40.0%
! CTCTATTAGTTGTCACTTGC+AGG + chr7.3:64625499-64625518 None:intergenic 40.0%
! GTATTGGTCATGCCTTTAGA+AGG - chr7.3:64623458-64623477 MS.gene30260:intron 40.0%
! TGCTAAGAGAAGTGTGAACA+AGG - chr7.3:64625564-64625583 MS.gene30260:intron 40.0%
! TGTGCAATTGAGCTTTTGCT+AGG - chr7.3:64625400-64625419 MS.gene30260:CDS 40.0%
! TTTCTAGAAGCCATAAGAGG+CGG - chr7.3:64623580-64623599 MS.gene30260:intron 40.0%
!! AACTGTGCAGGATGTTTTGA+TGG - chr7.3:64627065-64627084 MS.gene30260:CDS 40.0%
!! AGTAGGGGAAAATCGATTTG+AGG + chr7.3:64622434-64622453 None:intergenic 40.0%
!!! CCAAATGGAGAGTTTTGAGT+AGG + chr7.3:64622451-64622470 None:intergenic 40.0%
!!! GGTAGTTTTAGCTTCTGATG+TGG - chr7.3:64625732-64625751 MS.gene30260:intron 40.0%
AAAGATTGAAGGGGCAAGGT+GGG + chr7.3:64622191-64622210 None:intergenic 45.0%
AACCCTTGAGAGCCTTCTAA+AGG + chr7.3:64623473-64623492 None:intergenic 45.0%
ACAGATGAGGTTGCTGTAAC+AGG + chr7.3:64627246-64627265 None:intergenic 45.0%
ACTAGCGGCATTATTAGCGA+CGG + chr7.3:64627139-64627158 None:intergenic 45.0%
ATAGCCACCAATATCCACCA+TGG + chr7.3:64624960-64624979 None:intergenic 45.0%
ATGACAGTTAGTGCCTTTCC+AGG - chr7.3:64623170-64623189 MS.gene30260:intron 45.0%
ATTCCTAAGGACCTCCAGAA+GGG + chr7.3:64623684-64623703 None:intergenic 45.0%
CAAATGCCATGCATAGACCT+AGG - chr7.3:64626435-64626454 MS.gene30260:CDS 45.0%
CACTTAGTGGGATAAGGCTT+TGG - chr7.3:64626843-64626862 MS.gene30260:CDS 45.0%
CAGATGAGGTTGCTGTAACA+GGG + chr7.3:64627245-64627264 None:intergenic 45.0%
CCCACTGGATATCAATCGAT+TGG - chr7.3:64622244-64622263 MS.gene30260:CDS 45.0%
CCCATACCCTATACTAGCAT+AGG + chr7.3:64625426-64625445 None:intergenic 45.0%
CGAGCTGTTATCTGATGCTA+AGG + chr7.3:64627211-64627230 None:intergenic 45.0%
CGGTTCAGAGAATACAGATG+AGG + chr7.3:64627259-64627278 None:intergenic 45.0%
CTCGCTCCCATGGTAAATAT+CGG - chr7.3:64624987-64625006 MS.gene30260:intron 45.0%
CTTATCCCACTAAGTGGAGT+CGG + chr7.3:64626839-64626858 None:intergenic 45.0%
GAATGTGAGCGAGCTTACAA+TGG - chr7.3:64624861-64624880 MS.gene30260:intron 45.0%
GCCTATGCTAGTATAGGGTA+TGG - chr7.3:64625422-64625441 MS.gene30260:CDS 45.0%
GCCTTCAAATCATCGAGAGT+CGG + chr7.3:64626354-64626373 None:intergenic 45.0%
GCTAGGCCTATGCTAGTATA+GGG - chr7.3:64625417-64625436 MS.gene30260:CDS 45.0%
GGACCGTCAATGTATTCCTA+AGG + chr7.3:64623697-64623716 None:intergenic 45.0%
GGGAAGGAAAATACTACTGC+TGG + chr7.3:64627387-64627406 None:intergenic 45.0%
TATTCCTAAGGACCTCCAGA+AGG + chr7.3:64623685-64623704 None:intergenic 45.0%
TCAAATCATCGAGAGTCGGT+CGG + chr7.3:64626350-64626369 None:intergenic 45.0%
TCCGCCATAATCCTCTATGA+CGG - chr7.3:64625027-64625046 MS.gene30260:intron 45.0%
TCTCAAATGTGGTGCCTCTA+GGG - chr7.3:64622214-64622233 MS.gene30260:CDS 45.0%
TCTTCTCCTAGGTCTATGCA+TGG + chr7.3:64626444-64626463 None:intergenic 45.0%
TGACAGTTAGTGCCTTTCCA+GGG - chr7.3:64623171-64623190 MS.gene30260:intron 45.0%
TGCTAGGCCTATGCTAGTAT+AGG - chr7.3:64625416-64625435 MS.gene30260:CDS 45.0%
TGGGGGAAATATAGGTAAGG+TGG - chr7.3:64625628-64625647 MS.gene30260:intron 45.0%
TGTATTGCTTGTGGAAGGGA+AGG + chr7.3:64627403-64627422 None:intergenic 45.0%
TGTCATTGTGCGCAGTAAGT+TGG + chr7.3:64623156-64623175 None:intergenic 45.0%
TTCTAGCAACCACTCCCATT+TGG + chr7.3:64622857-64622876 None:intergenic 45.0%
! ACCGACTCTCGATGATTTGA+AGG - chr7.3:64626350-64626369 MS.gene30260:intron 45.0%
! ATGCCTTTAGAAGGCTCTCA+AGG - chr7.3:64623467-64623486 MS.gene30260:intron 45.0%
! ATTTTTCCGCTCCGCTATAG+CGG + chr7.3:64624258-64624277 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + chr7.3:64626845-64626864 None:intergenic 45.0%
! GTGTCCCATTCTAGAAGAGT+TGG - chr7.3:64622514-64622533 MS.gene30260:CDS 45.0%
! TATTGACCAAGTGTTGCCGA+TGG + chr7.3:64625138-64625157 None:intergenic 45.0%
! TGCCTTTAGAAGGCTCTCAA+GGG - chr7.3:64623468-64623487 MS.gene30260:intron 45.0%
! TTTTTGAATGTCGGCCATGG+TGG - chr7.3:64624943-64624962 MS.gene30260:intron 45.0%
!! AATGGCATGATGGATGGTGT+TGG + chr7.3:64627282-64627301 None:intergenic 45.0%
!! GTGTTTTTGAATGTCGGCCA+TGG - chr7.3:64624940-64624959 MS.gene30260:intron 45.0%
!! TAGAGGCACCACATTTGAGA+CGG + chr7.3:64622214-64622233 None:intergenic 45.0%
AAAATCAAGACCACCGCACC+AGG - chr7.3:64624273-64624292 MS.gene30260:intron 50.0%
AAGATTGAAGGGGCAAGGTG+GGG + chr7.3:64622190-64622209 None:intergenic 50.0%
ACGGAAAGATTGAAGGGGCA+AGG + chr7.3:64622195-64622214 None:intergenic 50.0%
AGAGGGTCTAAAAGCCCTTC+TGG - chr7.3:64623667-64623686 MS.gene30260:intron 50.0%
ATTGGCGTACCAAATGGGAG+TGG - chr7.3:64622845-64622864 MS.gene30260:intron 50.0%
CGACTCCACTTAGTGGGATA+AGG - chr7.3:64626837-64626856 MS.gene30260:CDS 50.0%
CTCAAATGTGGTGCCTCTAG+GGG - chr7.3:64622215-64622234 MS.gene30260:CDS 50.0%
CTGCCTGACAGCAATAAGCA+TGG + chr7.3:64623808-64623827 None:intergenic 50.0%
GAAAGATTGAAGGGGCAAGG+TGG + chr7.3:64622192-64622211 None:intergenic 50.0%
GACAGTTAGTGCCTTTCCAG+GGG - chr7.3:64623172-64623191 MS.gene30260:intron 50.0%
GACCAACCCAATAATTGGCG+CGG + chr7.3:64624588-64624607 None:intergenic 50.0%
GAGCCAAAATCCCACCATAC+CGG + chr7.3:64625104-64625123 None:intergenic 50.0%
GCATCGCAACCCTTTCCAAA+TGG + chr7.3:64622466-64622485 None:intergenic 50.0%
GCCGTCATAGAGGATTATGG+CGG + chr7.3:64625031-64625050 None:intergenic 50.0%
GGACTTTGGGCCTTTCTGAA+GGG - chr7.3:64623630-64623649 MS.gene30260:intron 50.0%
GGCCTAAAACAGTTGAGGGT+TGG - chr7.3:64625251-64625270 MS.gene30260:intron 50.0%
GTCAATGCGAAAATGCAGCG+CGG + chr7.3:64624614-64624633 None:intergenic 50.0%
GTCTCAAATGTGGTGCCTCT+AGG - chr7.3:64622213-64622232 MS.gene30260:CDS 50.0%
TCACTTGCAGGCATGCACAA+AGG + chr7.3:64625487-64625506 None:intergenic 50.0%
TGAGGTTGCTGTAACAGGGA+AGG + chr7.3:64627241-64627260 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG - chr7.3:64626830-64626849 MS.gene30260:CDS 50.0%
! GGTGCCGTCATAGAGGATTA+TGG + chr7.3:64625034-64625053 None:intergenic 50.0%
! TGTAGCCGACTCCACTTAGT+GGG - chr7.3:64626831-64626850 MS.gene30260:CDS 50.0%
! TGTCTTTTCGCTCGCTCACA+CGG - chr7.3:64624194-64624213 MS.gene30260:intron 50.0%
! TTGATGGCTCTCCCAAGTGT+TGG - chr7.3:64627081-64627100 MS.gene30260:CDS 50.0%
!! ATGTCGGCCATGGTGGATAT+TGG - chr7.3:64624950-64624969 MS.gene30260:intron 50.0%
!!! TATTTTTGGGCTCGCTCCCA+TGG - chr7.3:64624977-64624996 MS.gene30260:intron 50.0%
ACCCAATAATTGGCGCGGTG+CGG + chr7.3:64624583-64624602 None:intergenic 55.0%
AGAAGGGAAAGCGGCCAAAG+CGG - chr7.3:64624333-64624352 MS.gene30260:intron 55.0%
ATCCTCTATGACGGCACCAC+AGG - chr7.3:64625036-64625055 MS.gene30260:intron 55.0%
ATGCTCGCTACGCTGTTGCA+TGG + chr7.3:64622773-64622792 None:intergenic 55.0%
CACCGCGCCAATTATTGGGT+TGG - chr7.3:64624583-64624602 MS.gene30260:intron 55.0%
CAGAAAGGCCCAAAGTCCCA+AGG + chr7.3:64623628-64623647 None:intergenic 55.0%
CATCCACCATCGGCAACACT+TGG - chr7.3:64625129-64625148 MS.gene30260:intron 55.0%
CTGGGAAGCTGTGTGTGTGT+TGG - chr7.3:64625693-64625712 MS.gene30260:intron 55.0%
GCACGTGTCAGAAGGGAAAG+CGG - chr7.3:64624324-64624343 MS.gene30260:intron 55.0%
GGACTCAGTGCCCTTCAGAA+AGG + chr7.3:64623643-64623662 None:intergenic 55.0%
GGCGCGACCAACCCAATAAT+TGG + chr7.3:64624593-64624612 None:intergenic 55.0%
GGGACTTTGGGCCTTTCTGA+AGG - chr7.3:64623629-64623648 MS.gene30260:intron 55.0%
GGGTCTAAAAGCCCTTCTGG+AGG - chr7.3:64623670-64623689 MS.gene30260:intron 55.0%
TCCTCTATGACGGCACCACA+AGG - chr7.3:64625037-64625056 MS.gene30260:intron 55.0%
TCCTCTATGACGGCACCACA+GGG - chr7.3:64625037-64625056 MS.gene30260:intron 55.0%
TCTATGACGGCACCACAAGG+CGG - chr7.3:64625078-64625097 MS.gene30260:intron 55.0%
TGCTCGCTACGCTGTTGCAT+GGG + chr7.3:64622772-64622791 None:intergenic 55.0%
! AAGCCCTTCTGGAGGTCCTT+AGG - chr7.3:64623678-64623697 MS.gene30260:intron 55.0%
! AATGTGGTGCCTCTAGGGGA+TGG - chr7.3:64622219-64622238 MS.gene30260:CDS 55.0%
! ATGTGGTGCCTCTAGGGGAT+GGG - chr7.3:64622220-64622239 MS.gene30260:CDS 55.0%
! GGGCTTTTAGACCCTCTCAG+AGG + chr7.3:64623664-64623683 None:intergenic 55.0%
! GTCTTTTCGCTCGCTCACAC+GGG - chr7.3:64624195-64624214 MS.gene30260:intron 55.0%
! TCTTTTCGCTCGCTCACACG+GGG - chr7.3:64624196-64624215 MS.gene30260:intron 55.0%
! TGACCAAGTGTTGCCGATGG+TGG + chr7.3:64625135-64625154 None:intergenic 55.0%
! TTACCATACTGGCTGCCCTG+TGG + chr7.3:64625055-64625074 None:intergenic 55.0%
!! CAAGTGTTGCCGATGGTGGA+TGG + chr7.3:64625131-64625150 None:intergenic 55.0%
!! GGCATGATGGATGGTGTTGG+CGG + chr7.3:64627279-64627298 None:intergenic 55.0%
!! TCGGCCATGGTGGATATTGG+TGG - chr7.3:64624953-64624972 MS.gene30260:intron 55.0%
AGGCCACATCGGTGCGTTTC+AGG - chr7.3:64624293-64624312 MS.gene30260:intron 60.0%
AGGGCGCACCTTGGGACTTT+GGG - chr7.3:64623617-64623636 MS.gene30260:intron 60.0%
CCCAATAATTGGCGCGGTGC+GGG + chr7.3:64624582-64624601 None:intergenic 60.0%
CCCGCACCGCGCCAATTATT+GGG - chr7.3:64624579-64624598 MS.gene30260:intron 60.0%
GTTCGCGCTGCTGTGCAAAG+AGG - chr7.3:64622266-64622285 MS.gene30260:CDS 60.0%
GTTGTCAAAAGCAGCCGCGC+CGG - chr7.3:64624232-64624251 MS.gene30260:intron 60.0%
TCCCGCACCGCGCCAATTAT+TGG - chr7.3:64624578-64624597 MS.gene30260:intron 60.0%
TTACATGTCGGAGAGCCCCG+TGG + chr7.3:64623242-64623261 None:intergenic 60.0%
! CTTTTCGCTCGCTCACACGG+GGG - chr7.3:64624197-64624216 MS.gene30260:intron 60.0%
! TGAAACGCACCGATGTGGCC+TGG + chr7.3:64624294-64624313 None:intergenic 60.0%
!! AGGGCACTGAGTCCTCTGAG+AGG - chr7.3:64623649-64623668 MS.gene30260:intron 60.0%
!! CGGCCGGTATGGTGGGATTT+TGG - chr7.3:64625098-64625117 MS.gene30260:intron 60.0%
!! GCACGTAGCGGGCGCTATTT+CGG + chr7.3:64624553-64624572 None:intergenic 60.0%
!! GCCTTGTGGTGCCGTCATAG+AGG + chr7.3:64625079-64625098 None:intergenic 60.0%
!! GGGCACTGAGTCCTCTGAGA+GGG - chr7.3:64623650-64623669 MS.gene30260:intron 60.0%
!! GTGTTGCCGATGGTGGATGG+CGG + chr7.3:64625128-64625147 None:intergenic 60.0%
AAGGGGCAAGGTGGGGTCAC+GGG + chr7.3:64622183-64622202 None:intergenic 65.0%
ACCACCGCACCAGGCCACAT+CGG - chr7.3:64624282-64624301 MS.gene30260:intron 65.0%
CACAAGGCGGCCGGTATGGT+GGG - chr7.3:64625091-64625110 MS.gene30260:intron 65.0%
CAGTGGGTCCCATCCCCTAG+AGG + chr7.3:64622231-64622250 None:intergenic 65.0%
GAAGGGGCAAGGTGGGGTCA+CGG + chr7.3:64622184-64622203 None:intergenic 65.0%
GCACCACAGGGCAGCCAGTA+TGG - chr7.3:64625049-64625068 MS.gene30260:intron 65.0%
GGCTCTCCGCCATCCACCAT+CGG - chr7.3:64625119-64625138 MS.gene30260:intron 65.0%
TAATTGGCGCGGTGCGGGAG+CGG + chr7.3:64624577-64624596 None:intergenic 65.0%
TTCCGCTCCGCTATAGCGGC+CGG + chr7.3:64624254-64624273 None:intergenic 65.0%
! CCTTCTGACACGTGCCGACG+CGG + chr7.3:64624319-64624338 None:intergenic 65.0%
! CGCGTCGGCACGTGTCAGAA+GGG - chr7.3:64624317-64624336 MS.gene30260:intron 65.0%
! CGGCCTGAAACGCACCGATG+TGG + chr7.3:64624299-64624318 None:intergenic 65.0%
! CGGGCGCTATTTCGGTGGTG+CGG + chr7.3:64624545-64624564 None:intergenic 65.0%
! CTCTAGGGGATGGGACCCAC+TGG - chr7.3:64622229-64622248 MS.gene30260:CDS 65.0%
! GAGGGCGCACCTTGGGACTT+TGG - chr7.3:64623616-64623635 MS.gene30260:intron 65.0%
!! CGTAGCGGGCGCTATTTCGG+TGG + chr7.3:64624550-64624569 None:intergenic 65.0%
!! GCCCTGTGGTGCCGTCATAG+AGG + chr7.3:64625041-64625060 None:intergenic 65.0%
AATTGGCGCGGTGCGGGAGC+GGG + chr7.3:64624576-64624595 None:intergenic 70.0%
ACCGATGTGGCCTGGTGCGG+TGG + chr7.3:64624286-64624305 None:intergenic 70.0%
CCACAAGGCGGCCGGTATGG+TGG - chr7.3:64625090-64625109 MS.gene30260:intron 70.0%
CCACCATACCGGCCGCCTTG+TGG + chr7.3:64625093-64625112 None:intergenic 70.0%
CGGTGCGTTTCAGGCCGCGT+CGG - chr7.3:64624302-64624321 MS.gene30260:intron 70.0%
GCACCACAAGGCGGCCGGTA+TGG - chr7.3:64625087-64625106 MS.gene30260:intron 70.0%
TGACGGCACCACAAGGCGGC+CGG - chr7.3:64625082-64625101 MS.gene30260:intron 70.0%
! CCGCGTCGGCACGTGTCAGA+AGG - chr7.3:64624316-64624335 MS.gene30260:intron 70.0%
! CGCACCGATGTGGCCTGGTG+CGG + chr7.3:64624289-64624308 None:intergenic 70.0%
! GCTCGCTCACACGGGGGCAT+AGG - chr7.3:64624203-64624222 MS.gene30260:intron 70.0%
AAGGTGCGCCCTCCCCAGGG+CGG + chr7.3:64623609-64623628 None:intergenic 75.0%
ATAAGAGGCGGCGCCCGCCC+TGG - chr7.3:64623592-64623611 MS.gene30260:intron 75.0%
ATTGGCGCGGTGCGGGAGCG+GGG + chr7.3:64624575-64624594 None:intergenic 75.0%
CCCAAGGTGCGCCCTCCCCA+GGG + chr7.3:64623612-64623631 None:intergenic 75.0%
CTCCGCTATAGCGGCCGGCG+CGG + chr7.3:64624249-64624268 None:intergenic 75.0%
TAAGAGGCGGCGCCCGCCCT+GGG - chr7.3:64623593-64623612 MS.gene30260:intron 75.0%
TCCCAAGGTGCGCCCTCCCC+AGG + chr7.3:64623613-64623632 None:intergenic 75.0%
TGCGGGAGCGGGGCACGTAG+CGG + chr7.3:64624565-64624584 None:intergenic 75.0%
! AGCCGCGCCGGCCGCTATAG+CGG - chr7.3:64624244-64624263 MS.gene30260:intron 75.0%
! AGGGCGGGCGCCGCCTCTTA+TGG + chr7.3:64623593-64623612 None:intergenic 75.0%
! CCCTGGGGAGGGCGCACCTT+GGG - chr7.3:64623609-64623628 MS.gene30260:intron 75.0%
! CGCCGGCCGCTATAGCGGAG+CGG - chr7.3:64624249-64624268 MS.gene30260:intron 75.0%
! AAGAGGCGGCGCCCGCCCTG+GGG - chr7.3:64623594-64623613 MS.gene30260:intron 80.0%
! AGGTGCGCCCTCCCCAGGGC+GGG + chr7.3:64623608-64623627 None:intergenic 80.0%
! GCGGGAGCGGGGCACGTAGC+GGG + chr7.3:64624564-64624583 None:intergenic 80.0%
!! GCCCTGGGGAGGGCGCACCT+TGG - chr7.3:64623608-64623627 MS.gene30260:intron 80.0%
! AGGCGGCGCCCGCCCTGGGG+AGG - chr7.3:64623597-64623616 MS.gene30260:intron 90.0%
! GGCGGCGCCCGCCCTGGGGA+GGG - chr7.3:64623598-64623617 MS.gene30260:intron 90.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 64622173 64627518 64622173 ID=MS.gene30260
chr7.3 mRNA 64622173 64627518 64622173 ID=MS.gene30260.t1;Parent=MS.gene30260
chr7.3 exon 64627003 64627518 64627003 ID=MS.gene30260.t1.exon1;Parent=MS.gene30260.t1
chr7.3 CDS 64627003 64627518 64627003 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
chr7.3 exon 64626770 64626910 64626770 ID=MS.gene30260.t1.exon2;Parent=MS.gene30260.t1
chr7.3 CDS 64626770 64626910 64626770 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
chr7.3 exon 64626434 64626686 64626434 ID=MS.gene30260.t1.exon3;Parent=MS.gene30260.t1
chr7.3 CDS 64626434 64626686 64626434 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
chr7.3 exon 64625388 64625466 64625388 ID=MS.gene30260.t1.exon4;Parent=MS.gene30260.t1
chr7.3 CDS 64625388 64625466 64625388 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
chr7.3 exon 64624588 64624633 64624588 ID=MS.gene30260.t1.exon5;Parent=MS.gene30260.t1
chr7.3 CDS 64624588 64624633 64624588 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
chr7.3 exon 64622173 64622616 64622173 ID=MS.gene30260.t1.exon6;Parent=MS.gene30260.t1
chr7.3 CDS 64622173 64622616 64622173 ID=cds.MS.gene30260.t1;Parent=MS.gene30260.t1
Gene Sequence

>MS.gene30260

ATGCTCGCCCGTGACCCCACCTTGCCCCTTCAATCTTTCCGTCTCAAATGTGGTGCCTCTAGGGGATGGGACCCACTGGATATCAATCGATTGGTTCGCGCTGCTGTGCAAAGAGGAACTCAGAATTTCATCCTGGATTTGAGTAAAACTCGTGGAGAATTTCATTTCAATAACAAATTAGGTTCTACAATTTCCACAATTTTCAATTCTAGAAACCTTGTGGTTCTTAAGTTGAAAGCATTAGTGGTGAATGTTCTTCCTCAAATCGATTTTCCCCTACTCAAAACTCTCCATTTGGAAAGGGTTGCGATGCTAAAAGATTTTGATAAGCTTATCGAGGGGTGTCCCATTCTAGAAGAGTTGGAAATAACTTCTTTGCTATGTATTCTTTTGAAAGATGGTATTGGAGAGTTTAAACACTTGCCCAATTTGGTCAGAGCAAACATTTCTCAATTTGTTCCACGAAATATTCAATTTGCTTGGATTTGCAATGCAAAGTTTTTGCGTTTAGAAGTGGTATGACTATCACTACTCATCACTAGCTAGGCCTAGAGTTACATTAAGTTGAAGCTTATTTCTAATGTTTCTCTTTGTAACCCATGCAACAGCGTAGCGAGCATCAAGTTCACACTTTTCATAACTTAACTCACATGGAGCTTATATTCAAATCAAATTGGCGTACCAAATGGGAGTGGTTGCTAGAAATGTTGAAGAATTGCCCTAAACTTCAAAATCTTACCCTTCACAAGGTTGTAATTATGTCAATGATGATGATTTTTTTTTGTAGCTCTACTTTCAACTAATTTAATTTTTTTTATGCTGATTTTGACAGCTTTATGGACATGGTATTGATGACGATGATTGGAATGAACCACAAATTGTTCCAAAATGTCTTTCTTCTCAACTAAGAACATGCTCGCTTATAGATTACAAAGGCATGAAGTGTGAGCTTCAGTTTGCAGAGTATGTTTTGAAGAATGCCAACTTACTGCGCACAATGACAGTTAGTGCCTTTCCAGGGGATTTAACTTCAAAGTACCAAATGCTAATGGATTTATCTTTGTGTCCACGGGGCTCTCCGACATGTAAACTTTCATTCATTTGATTGAAGAAGGTTAGGACACGTCTACTTTAATTCCTATTTTCTAATGTTATATTAGATTCTAGATATGCAATAATATCAATGTGATGGTTTGAAATACATGCACTTTGTTTCATTAGCTAGGTCTCTGTCATATATTTTTGTACTTGCAAAAAGTACAATAATCGTATTAGGGTTTGTATTGTATTGGTCATGCCTTTAGAAGGCTCTCAAGGGTTGTATTTATAGCCCTCTATGGGACTGATTAGTGATTACTTAGGCAGCAAGTAATAGGGGTATTTTGGTATTTAGGTGTGTTCTAGAGGTTTCTAGAAGCCATAAGAGGCGGCGCCCGCCCTGGGGAGGGCGCACCTTGGGACTTTGGGCCTTTCTGAAGGGCACTGAGTCCTCTGAGAGGGTCTAAAAGCCCTTCTGGAGGTCCTTAGGAATACATTGACGGTCCAATTTTCAAATAAGTTTTTTGAATCTAGCTCCTCCAAACCTGTGAAATTTCCTTCCTTGCTGATAATTGTTTTTGTTTTAAGTTATATCCATGCTTATTGCTGTCAGGCAGTTGTTTACTAAATACTGATATGACGCAGAACTTGAACCATCACTAAGTTCATATTGAAATTTGATTGCATGCATGTTGTTGAAGCTGTAAACAGTCACCAACAGTACGACAATGCATTAGGTAGTCTTTTGAATGAGTGTAGGGAGCTTTTGTTAGCTAGTACCAACTTTCAGGTAAGTTTTATTAGGCGACAAGCCAATTGAATTGCTCACTCTCTAATGTAGGGAGATTTTGTTAGCTAGTACCGACTTTTGTTAACTGTTCTTTCTAGTCCGTGTTTTTTATTACTTGTCACACTTTATTGAGACTATTATTATGAATGGAATGTTCTAAGCCTCTCTAAGTTAAAAATATGTTTGTCAAGTATGTCTTTTCGCTCGCTCACACGGGGGCATAGGTTGTGTGTTGTCAAAAGCAGCCGCGCCGGCCGCTATAGCGGAGCGGAAAAATCAAGACCACCGCACCAGGCCACATCGGTGCGTTTCAGGCCGCGTCGGCACGTGTCAGAAGGGAAAGCGGCCAAAGCGGACCTATAAATAGTAAAACAATAACTTGTACTAGTTGTATATAATTGGTATTAGCCATTTCGATTTTGCTGTCCCTTTTATTTCATATTATGAATATTTCATGAAATTTTGAGTAATGTTTAAGGTATTTTAGTATTTTTTTTTTTTTTTTGAATAGTATGGTATCTGGTATTAAATTTATTAGTGGCCGCACCACCGAAATAGCGCCCGCTACGTGCCCCGCTCCCGCACCGCGCCAATTATTGGGTTGGTCGCGCCGCGCTGCATTTTCGCATTGACATCAGATGTTCACCTGAATACACAACTAAAGATTTAAAATGTAGTTCTACGACTCTATGCTAATGCTATAAAAGTAATTTTTTTATCTTTTTACATAATTAAGGTTTGCAATTGACACATGTGCATGTGCCTTGTACGCTGATTAATGAACATGTTTATTGTGGACATATGGAATGGAAGTCACTGATATTATAGTTTGCAATTGCAACTACACAAACTAACTAGTTGAATGTGAGCGAGCTTACAATGGAAAATTGACAATGTGGTCTTAGTTTGTTTTAAAGTCTGAGAGTCAAGTTCAATACAGTGTTTTTGAATGTCGGCCATGGTGGATATTGGTGGCTATTTTTGGGCTCGCTCCCATGGTAAATATCGGCTGATGTTGTAGGTTTTTCCGCCATAATCCTCTATGACGGCACCACAGGGCAGCCAGTATGGTAATCCTCTATGACGGCACCACAAGGCGGCCGGTATGGTGGGATTTTGGCTCTCCGCCATCCACCATCGGCAACACTTGGTCAATATCAGTCTCATTGCGGTAGCATTACAATTTTTTTTACTAGGAACTTGTCAAGTTTTGTGTAACTAGATGCATCCACTTGCTTAACTAATTTAATGGCCTAAAACAGTTGAGGGTTGGTTTTGTATCCACTTATGTGAGTGTTGGATGACAATGAAATTTTCTTCTTTACTAGGCTTGTTTCTTTATTGTGATATACTAATATGACTTTTATTCTTTTATTGACATTTTGTTTAATAAAATTTGTGTGCAATTGAGCTTTTGCTAGGCCTATGCTAGTATAGGGTATGGGATGTAGAATAAATGGGTAAGTTGCAGCATAATGAAATGCCTTTGTGCATGCCTGCAAGTGACAACTAATAGAGGCAGAAACAAGAGGGAATTAATTAAGTTTATGGGAGTTCGTTAAATGCTAAGAGAAGTGTGAACAAGGCCTATGCTAGAAATATAGGAAGTATAGGATAAGGCTATGTTTGGGGGAAATATAGGTAAGGTGGAAGTTTGTTGAAATACATAAGTGTCTTGTAAAAGGACTGTTGCTGGGAAGCTGTGTGTGTGTTGGAAATGTTATCAAACAAGGTAGTTTTAGCTTCTGATGTGGCACTAGCAAGCATTTTTTGTCAGAATGTTCTCTAAATCAAATATATGAATTTTTTTTATCATGCGAGGCACAAAAGAAAATAACCAGGTTCCAATAAGTTCATAGTAATTGCAATTTTCAACATTAAGTAACTTTCAGCAGAAATTAGGATCATTGAATGCTTTGCCGTAGAAAAATGAATGTTTGACTATAGAAAAAGGTACAACAGCTCAACGAAATAGCTATATGGCAATGACTTGAAATTAATGAGTGATTTTTTGTCGGTGTTAGTCCTTTTTTTTTTTGTAGATATTACACCGACGTATATTTTGGGTCGAAATTGTAACGCCAATATATAAGTAACATTATGTAATTTATATTGATATATATGATAATATGACTTTTATGTGGTGAAACTAATGGAATACTTATTTATTCGTTATTAATGTTTACGCATTTGATTTATTCATTATTACATTTCATTTAATTTTGTTCTAATCTATGATTTTTTTTTCTCAAAGCTTTTGTCAAGTGAAACATGTCTGAGGTTGCAAAAATTGAAGGGCGTGTTAGGTTCTCTGCGTTTAAAATGACGATAAAGGTAATGATAACGCCGACCGACTCTCGATGATTTGAAGGCACAACTTAACACTTATTTTGAGCATCTTGGTGAAAATCAATATACACGTCACTTGTTTGGTCAAATGCCATGCATAGACCTAGGAGAAGATAGAGATGAATAGGCATGGAAAACAGCATGCTGTATGCCTTCTTATTGAAGACGATAGCGACGTCGAATTTATGTTTCGGAATATGGTGGAAAATATAATTATTTATTTAATATCTTGAAAACTTTGTTATGAAGTGTTCCCTATAATGTATAAACACACCTTCTTTGTTTGAGTCCATTTGAGTTTTGAACATACACCAAATAATACCAGGACTAAATGCAAAAAATATTGCATGGACTAAAACATATTAAAAGAATACCAAAGTAAACAAAATGAATAATGAGAAACTATCAAGAAGGATCTAGAGATTAATGAATTGGGGAAAGACATGGTTTTTTATAAAACATTATGGCATCGTTTGATTCATGTAGCCGACTCCACTTAGTGGGATAAGGCTTTGGTTGTTGTTGTTGTAAACAAAAGAATATACATTACATCGATCAGTTTGTTATAATGAATTTTACAGGGACTAAGACGATAAACTAGATATATAAGGGATAAAAATGCATCTAAATTGTTTTTTTTTTGTATATTATATTATTATCACAATACATATGTTTTTGACCTCCTATTTCATGAACGTAATGTTTTTGATGTACTAACTGTGCAGGATGTTTTGATGGCTCTCCCAAGTGTTGGTCAGTATCCTTTAGTAAATCAAGAAAAGAAGACCGTCGCTAATAATGCCGCTAGTAAACCAGTTTTAGCTCCAATTTCCATCAAGAAGGTTGAATCAAAATGGGCCTTAGCATCAGATAACAGCTCGGGATTTACCTTCCCTGTTACAGCAACCTCATCTGTATTCTCTGAACCGCCAACACCATCCATCATGCCATTATTATTCTCTACTAGTAATCAGCAACAATTAGAAGAAACATCTAACCAATTGTCATACAGTTTTGGAGTTAAAAAGTCGAATCCAGCAGTAGTATTTTCCTTCCCTTCCACAAGCAATACAGTTGATAATGATGCTGGAGTCATAAAGTATAACTTTGGTTCAATCAATACGGCAAGGCTATCGTTTTCATTTGAAAAAACTGCTGTCAACTGTTGA

Protein sequence

>MS.gene30260.t1

MLARDPTLPLQSFRLKCGASRGWDPLDINRLVRAAVQRGTQNFILDLSKTRGEFHFNNKLGSTISTIFNSRNLVVLKLKALVVNVLPQIDFPLLKTLHLERVAMLKDFDKLIEGCPILEELEITSLLCILLKDGIGEFKHLPNLVRANISQFVPRNIQFAWICNAKFLRLEVRSEHQVHTFHNLTHMELIFKSNWRTKWEWLLEMLKNCPKLQNLTLHKLYGHGIDDDDWNEPQIVPKCLSSQLRTCSLIDYKGMKCELQFAEYVLKNANLLRTMTVSAFPGDLTSKYQMLMDLSLCPRGSPTCCVLSKAAAPAAIAERKNQDHRTRPHRAASMVILYDGTTRRPDVLMALPSVGQYPLVNQEKKTVANNAASKPVLAPISIKKVESKWALASDNSSGFTFPVTATSSVFSEPPTPSIMPLLFSTSNQQQLEETSNQLSYSFGVKKSNPAVVFSFPSTSNTVDNDAGVIKYNFGSINTARLSFSFEKTAVNC