AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056517


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056517.t1 MTR_8g070950 92.273 440 32 1 1 438 1 440 0.0 810
MS.gene056517.t1 MTR_8g062010 62.780 446 132 11 10 436 4 434 1.16e-177 503
MS.gene056517.t1 MTR_8g062080 60.412 437 148 8 15 436 23 449 4.18e-174 495
MS.gene056517.t1 MTR_8g062310 60.563 426 148 8 15 437 25 433 4.47e-169 481
MS.gene056517.t1 MTR_8g058965 57.415 472 142 13 11 436 2 460 9.71e-164 469
MS.gene056517.t1 MTR_8g469020 56.114 458 158 9 15 437 7 456 7.64e-162 464
MS.gene056517.t1 MTR_8g062300 53.673 490 164 13 1 436 1 481 3.53e-154 446
MS.gene056517.t1 MTR_8g467790 57.979 376 114 7 15 376 148 493 4.45e-135 398
MS.gene056517.t1 MTR_4g050250 54.054 407 137 12 15 378 21 420 9.81e-128 376
MS.gene056517.t1 MTR_2g083840 42.797 472 215 18 1 432 1 457 1.33e-93 290
MS.gene056517.t1 MTR_8g468810 42.050 478 216 20 1 432 1 463 3.46e-93 289
MS.gene056517.t1 MTR_8g058970 40.787 483 226 15 3 432 2 477 4.12e-88 276
MS.gene056517.t1 MTR_8g062270 41.501 453 214 16 15 431 16 453 2.24e-85 268
MS.gene056517.t1 MTR_8g014260 42.549 463 223 21 1 432 1 451 1.43e-83 264
MS.gene056517.t1 MTR_4g032730 37.107 477 243 13 1 431 1 466 1.36e-80 256
MS.gene056517.t1 MTR_8g468760 39.735 453 200 13 12 431 6 418 1.77e-75 242
MS.gene056517.t1 MTR_8g467800 39.700 466 234 14 7 437 5 458 1.88e-75 243
MS.gene056517.t1 MTR_2g086020 81.944 144 26 0 294 437 177 320 1.79e-74 236
MS.gene056517.t1 MTR_2g086020 48.344 151 57 5 41 179 1 142 2.51e-32 125
MS.gene056517.t1 MTR_5g092960 37.983 466 245 14 1 431 5 461 2.29e-73 238
MS.gene056517.t1 MTR_8g468840 38.839 448 231 14 14 430 13 448 7.19e-72 233
MS.gene056517.t1 MTR_8g468810 41.253 383 172 16 1 342 1 371 1.31e-67 220
MS.gene056517.t1 MTR_8g445780 40.831 409 199 20 1 385 1 390 1.33e-65 215
MS.gene056517.t1 MTR_8g468810 42.997 307 128 14 1 271 1 296 5.05e-57 191
MS.gene056517.t1 MTR_8g468810 42.997 307 128 14 1 271 1 296 6.77e-57 191
MS.gene056517.t1 MTR_8g468810 42.997 307 128 14 1 271 1 296 1.19e-56 191
MS.gene056517.t1 MTR_8g014160 34.753 446 206 20 13 432 39 425 1.54e-54 187
MS.gene056517.t1 MTR_5g092960 37.534 373 196 11 1 342 5 371 6.96e-49 172
MS.gene056517.t1 MTR_4g024710 37.415 294 161 12 154 432 62 347 3.51e-41 150
MS.gene056517.t1 MTR_8g467800 40.000 295 142 10 7 273 5 292 3.05e-39 144
MS.gene056517.t1 MTR_1g041245 31.461 445 209 19 15 432 11 386 7.84e-38 142
MS.gene056517.t1 MTR_8g014210 39.831 236 128 7 206 432 1 231 6.47e-37 135
MS.gene056517.t1 MTR_7g056433 28.637 433 245 15 12 432 9 389 2.29e-34 132
MS.gene056517.t1 MTR_8g077460 48.120 133 66 3 300 432 246 375 3.22e-32 126
MS.gene056517.t1 MTR_8g077460 39.394 231 114 11 1 215 1 221 1.76e-28 115
MS.gene056517.t1 MTR_5g021550 51.007 149 59 7 12 148 16 162 1.36e-31 119
MS.gene056517.t1 MTR_5g080710 29.186 442 269 17 7 424 25 446 3.19e-30 122
MS.gene056517.t1 MTR_4g024745 36.594 276 152 11 155 415 17 284 3.94e-30 118
MS.gene056517.t1 MTR_3g099800 66.667 87 28 1 344 429 19 105 5.04e-30 112
MS.gene056517.t1 MTR_5g008950 27.500 440 220 19 17 432 1 365 4.76e-29 117
MS.gene056517.t1 MTR_7g098510 28.082 438 241 16 10 432 13 391 9.83e-27 111
MS.gene056517.t1 MTR_5g084070 27.982 436 285 15 1 424 1 419 1.95e-26 110
MS.gene056517.t1 MTR_5g008920 28.276 435 232 16 17 435 14 384 2.88e-26 109
MS.gene056517.t1 MTR_6g022500 28.507 442 226 20 15 432 101 476 3.76e-26 110
MS.gene056517.t1 MTR_1089s0010 26.591 440 241 18 11 432 4 379 1.68e-25 107
MS.gene056517.t1 MTR_1g108820 30.024 423 241 18 15 429 8 383 8.83e-25 105
MS.gene056517.t1 MTR_7g033915 27.523 436 215 19 15 431 11 364 5.14e-24 103
MS.gene056517.t1 MTR_3g108150 25.754 431 251 15 14 431 12 386 8.03e-24 102
MS.gene056517.t1 MTR_1g085120 27.880 434 245 19 14 432 91 471 9.68e-24 103
MS.gene056517.t1 MTR_2g007450 27.902 448 244 17 15 429 16 417 1.17e-23 102
MS.gene056517.t1 MTR_1g085120 27.880 434 245 19 14 432 166 546 1.57e-23 103
MS.gene056517.t1 MTR_6g011460 30.000 400 215 15 15 404 46 390 2.72e-23 101
MS.gene056517.t1 MTR_8g014290 41.558 154 70 7 13 148 8 159 1.02e-22 94.4
MS.gene056517.t1 MTR_7g026500 27.854 438 238 21 15 431 14 394 2.81e-22 98.6
MS.gene056517.t1 MTR_5g058100 28.018 439 238 17 11 431 5 383 8.06e-22 97.1
MS.gene056517.t1 MTR_7g098480 25.977 435 250 10 10 431 13 388 1.00e-21 97.8
MS.gene056517.t1 MTR_3g109982 28.270 474 245 21 8 411 6 454 1.27e-21 98.2
MS.gene056517.t1 MTR_3g082890 28.384 458 248 21 1 432 81 484 1.89e-21 97.1
MS.gene056517.t1 MTR_7g098570 26.667 450 244 16 1 427 2 388 1.31e-20 94.4
MS.gene056517.t1 MTR_7g115270 36.058 208 97 12 14 199 11 204 1.52e-20 93.6
MS.gene056517.t1 MTR_7g056287 26.157 432 243 15 14 431 2 371 1.75e-20 92.8
MS.gene056517.t1 MTR_7g007080 29.111 450 223 21 13 435 2 382 1.84e-20 93.2
MS.gene056517.t1 MTR_4g024720 41.989 181 69 10 1 149 1 177 2.33e-20 89.4
MS.gene056517.t1 MTR_7g056277 26.196 439 242 16 10 431 254 627 2.99e-20 94.0
MS.gene056517.t1 MTR_2g008310 27.880 434 233 19 15 432 2 371 6.45e-20 91.7
MS.gene056517.t1 MTR_5g073420 34.031 191 110 8 15 195 11 195 6.93e-20 91.3
MS.gene056517.t1 MTR_8g085430 34.848 198 104 8 15 196 11 199 8.39e-20 90.5
MS.gene056517.t1 MTR_7g056447 35.602 191 101 9 14 194 8 186 1.29e-19 89.4
MS.gene056517.t1 MTR_7g032380 34.555 191 107 7 15 196 11 192 1.78e-19 89.7
MS.gene056517.t1 MTR_3g467400 26.328 433 236 19 15 432 3 367 3.64e-19 89.0
MS.gene056517.t1 MTR_4g039440 27.945 433 243 21 15 432 34 412 7.38e-19 88.6
MS.gene056517.t1 MTR_2g008320 28.043 460 233 23 1 432 38 427 2.90e-18 87.0
MS.gene056517.t1 MTR_6g040270 27.804 428 235 21 17 429 10 378 6.06e-18 85.5
MS.gene056517.t1 MTR_3g105060 26.174 447 237 20 4 432 2 373 1.25e-17 84.3
MS.gene056517.t1 MTR_3g087260 26.709 468 273 18 13 431 10 456 1.49e-17 85.1
MS.gene056517.t1 MTR_0009s0080 26.817 399 225 14 17 399 20 367 2.37e-17 84.3
MS.gene056517.t1 MTR_1g053025 28.118 441 235 22 15 429 2 386 3.04e-17 83.6
MS.gene056517.t1 MTR_5g061680 35.263 190 107 7 15 195 11 193 4.42e-17 82.4
MS.gene056517.t1 MTR_7g056420 26.464 427 221 18 14 424 8 357 1.92e-16 82.4
MS.gene056517.t1 MTR_6g045333 25.513 439 261 16 10 431 56 445 2.25e-16 81.3
MS.gene056517.t1 MTR_7g056430 26.464 427 221 18 14 424 8 357 2.33e-16 82.4
MS.gene056517.t1 MTR_8g014230 46.429 84 43 2 342 425 17 98 2.37e-16 75.1
MS.gene056517.t1 MTR_5g083890 27.523 436 230 20 14 414 5 389 8.78e-16 79.7
MS.gene056517.t1 MTR_4g024770 59.677 62 22 2 1 60 8 68 2.90e-15 70.9
MS.gene056517.t1 MTR_3g107120 25.537 419 225 17 10 399 4 364 4.04e-15 77.0
MS.gene056517.t1 MTR_5g073370 27.586 406 224 17 12 405 2 349 4.22e-15 77.0
MS.gene056517.t1 MTR_4g056030 35.533 197 109 8 12 197 6 195 4.73e-15 77.4
MS.gene056517.t1 MTR_7g075820 24.107 448 253 19 11 429 2 391 5.02e-15 77.0
MS.gene056517.t1 MTR_7g033990 30.808 198 110 7 15 197 11 196 5.16e-15 77.0
MS.gene056517.t1 MTR_6g022360 31.925 213 111 10 2 202 30 220 5.92e-15 76.6
MS.gene056517.t1 MTR_4g093690 33.700 273 140 16 12 267 15 263 6.24e-15 75.1
MS.gene056517.t1 MTR_3g082890 31.273 275 137 13 1 232 1 266 7.90e-15 76.6
MS.gene056517.t1 MTR_2g007400 25.164 457 238 20 15 432 12 403 1.09e-14 75.9
MS.gene056517.t1 MTR_7g114710 29.317 249 142 10 15 242 13 248 1.96e-14 74.7
MS.gene056517.t1 MTR_3g107100 28.866 194 121 8 12 196 8 193 2.32e-14 75.1
MS.gene056517.t1 MTR_3g095600 32.178 202 105 8 15 209 4 180 2.48e-14 73.6
MS.gene056517.t1 MTR_3g107160 26.136 440 243 18 12 432 7 383 2.65e-14 74.7
MS.gene056517.t1 MTR_4g056020 35.176 199 103 9 12 195 6 193 3.67e-14 74.7
MS.gene056517.t1 MTR_3g023470 36.879 141 77 7 12 149 12 143 4.52e-14 73.9
MS.gene056517.t1 MTR_7g033945 33.721 172 91 8 15 174 11 171 9.24e-14 69.7
MS.gene056517.t1 MTR_7g060470 25.359 418 234 17 14 406 2 366 1.65e-13 72.0
MS.gene056517.t1 MTR_1g090900 36.416 173 104 5 12 183 8 175 1.79e-13 69.3
MS.gene056517.t1 MTR_1g108820 29.305 331 185 15 15 338 8 296 1.79e-13 71.6
MS.gene056517.t1 MTR_7g034110 31.313 198 115 7 15 199 11 200 1.80e-13 71.6
MS.gene056517.t1 MTR_5g045510 32.086 187 114 8 15 195 12 191 2.54e-13 71.6
MS.gene056517.t1 MTR_2g007500 33.824 204 109 10 1 196 1 186 3.12e-13 70.9
MS.gene056517.t1 MTR_3g023630 32.461 191 109 11 15 195 8 188 5.53e-13 70.5
MS.gene056517.t1 MTR_2g020170 35.897 117 68 4 13 125 20 133 7.11e-13 66.2
MS.gene056517.t1 MTR_5g087940 35.542 166 94 7 10 174 21 174 7.29e-13 70.1
MS.gene056517.t1 MTR_1g085120 32.632 190 109 9 14 193 178 358 7.29e-13 70.5
MS.gene056517.t1 MTR_3g040700 28.283 198 130 6 5 195 33 225 9.05e-13 70.1
MS.gene056517.t1 MTR_3g110010 31.472 197 119 8 8 198 6 192 1.17e-12 70.5
MS.gene056517.t1 MTR_7g007340 32.124 193 97 8 11 197 9 173 1.23e-12 69.3
MS.gene056517.t1 MTR_7g034115 33.163 196 105 9 15 197 11 193 1.72e-12 68.9
MS.gene056517.t1 MTR_8g014180 57.627 59 22 2 1 57 1 58 1.78e-12 62.4
MS.gene056517.t1 MTR_5g058000 33.508 191 108 10 15 197 8 187 2.29e-12 68.6
MS.gene056517.t1 MTR_3g095640 32.317 164 94 7 7 156 6 166 2.55e-12 65.5
MS.gene056517.t1 MTR_6g044572 33.180 217 105 13 15 197 2 212 2.79e-12 68.6
MS.gene056517.t1 MTR_3g036250 29.293 198 114 9 12 195 2 187 2.90e-12 68.2
MS.gene056517.t1 MTR_6g044560 33.180 217 105 13 15 197 178 388 4.46e-12 68.6
MS.gene056517.t1 MTR_1g066830 31.579 190 112 9 15 195 8 188 7.71e-12 67.0
MS.gene056517.t1 MTR_3g114200 33.758 157 92 6 1 150 1 152 3.03e-11 62.0
MS.gene056517.t1 MTR_7g032370 32.117 137 85 3 303 432 217 352 4.23e-11 64.7
MS.gene056517.t1 MTR_1g107385 33.333 201 110 9 14 193 31 228 4.53e-11 64.7
MS.gene056517.t1 MTR_3g463830 34.722 144 80 7 12 150 60 194 6.27e-11 63.9
MS.gene056517.t1 MTR_1g038710 33.981 206 110 10 13 203 17 211 6.46e-11 64.3
MS.gene056517.t1 MTR_3g108560 30.208 192 112 10 12 196 17 193 9.47e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056517.t1 AT5G56420 26.984 441 277 15 14 432 5 422 1.84e-26 110
MS.gene056517.t1 AT5G56420 26.984 441 277 15 14 432 5 422 1.84e-26 110
MS.gene056517.t1 AT5G56420 26.984 441 277 15 14 432 5 422 1.84e-26 110
MS.gene056517.t1 AT5G56560 28.474 439 274 17 12 432 2 418 6.43e-26 109
MS.gene056517.t1 AT1G78750 24.736 473 289 18 2 429 5 455 1.23e-23 103
MS.gene056517.t1 AT1G78750 24.736 473 289 18 2 429 5 455 1.23e-23 103
MS.gene056517.t1 AT5G53840 27.373 453 268 20 10 429 13 437 1.73e-22 99.8
MS.gene056517.t1 AT2G26030 27.948 458 269 21 15 429 4 443 2.38e-21 96.3
MS.gene056517.t1 AT1G16930 25.786 477 281 21 1 432 1 449 4.79e-21 95.5
MS.gene056517.t1 AT1G16930 25.786 477 281 21 1 432 1 449 4.79e-21 95.5
MS.gene056517.t1 AT1G16930 25.786 477 281 21 1 432 1 449 4.79e-21 95.5
MS.gene056517.t1 AT2G26030 27.948 458 264 21 15 429 4 438 1.22e-20 94.4
MS.gene056517.t1 AT2G26030 27.948 458 264 21 15 429 4 438 1.22e-20 94.4
MS.gene056517.t1 AT3G50710 27.111 450 272 20 15 432 2 427 2.22e-20 93.2
MS.gene056517.t1 AT1G69630 26.166 493 248 23 3 429 6 448 9.39e-20 91.7
MS.gene056517.t1 AT5G50270 28.469 418 241 18 15 399 2 394 1.07e-19 91.3
MS.gene056517.t1 AT4G10400 27.563 439 264 19 15 431 2 408 1.35e-19 90.9
MS.gene056517.t1 AT4G10400 27.563 439 264 19 15 431 2 408 1.35e-19 90.9
MS.gene056517.t1 AT4G10400 27.563 439 264 19 15 431 2 408 1.35e-19 90.9
MS.gene056517.t1 AT4G26340 26.471 442 277 16 15 432 2 419 1.92e-19 90.5
MS.gene056517.t1 AT4G13985 25.380 461 283 18 11 429 15 456 1.42e-18 88.2
MS.gene056517.t1 AT3G59200 32.308 195 114 7 15 197 7 195 2.77e-18 86.3
MS.gene056517.t1 AT3G58920 27.651 481 271 20 15 432 2 468 5.79e-18 86.3
MS.gene056517.t1 AT1G51370 25.670 448 270 20 11 427 15 430 8.58e-18 85.5
MS.gene056517.t1 AT3G59200 32.308 195 114 7 15 197 7 195 9.57e-18 85.9
MS.gene056517.t1 AT5G22730 24.946 465 296 18 2 429 15 463 1.73e-17 84.7
MS.gene056517.t1 AT5G22730 24.946 465 296 18 2 429 15 463 1.73e-17 84.7
MS.gene056517.t1 AT5G56820 27.373 453 264 21 8 429 5 423 1.90e-17 84.7
MS.gene056517.t1 AT1G32375 28.508 449 262 22 15 432 2 422 3.55e-17 83.6
MS.gene056517.t1 AT1G32375 28.508 449 262 22 15 432 2 422 3.55e-17 83.6
MS.gene056517.t1 AT4G00160 29.484 407 233 18 14 391 15 396 4.78e-17 83.6
MS.gene056517.t1 AT5G56400 26.256 438 288 15 15 432 33 455 8.09e-17 82.8
MS.gene056517.t1 AT5G38570 25.701 428 253 15 15 431 2 375 9.04e-17 82.0
MS.gene056517.t1 AT1G66290 26.681 461 261 24 11 429 25 450 4.96e-16 80.5
MS.gene056517.t1 AT3G49150 30.275 218 134 9 13 221 14 222 5.31e-16 80.5
MS.gene056517.t1 AT5G60610 25.980 408 250 18 15 396 2 383 7.06e-16 79.3
MS.gene056517.t1 AT5G60610 25.980 408 250 18 15 396 2 383 7.06e-16 79.3
MS.gene056517.t1 AT5G22610 24.123 456 298 17 1 430 1 434 8.95e-16 79.7
MS.gene056517.t1 AT5G44950 25.942 451 277 17 14 427 3 433 9.62e-16 79.3
MS.gene056517.t1 AT4G14103 28.716 296 171 13 11 282 4 283 1.19e-15 78.6
MS.gene056517.t1 AT4G14103 28.716 296 171 13 11 282 4 283 1.19e-15 78.6
MS.gene056517.t1 AT4G14103 28.716 296 171 13 11 282 4 283 1.44e-15 79.0
MS.gene056517.t1 AT4G09920 27.957 279 165 13 15 269 2 268 2.19e-15 76.6
MS.gene056517.t1 AT4G09920 27.957 279 165 13 15 269 2 268 2.19e-15 76.6
MS.gene056517.t1 AT4G09920 27.957 279 165 13 15 269 2 268 2.19e-15 76.6
MS.gene056517.t1 AT5G22700 25.490 408 254 16 15 409 43 413 2.24e-15 78.2
MS.gene056517.t1 AT5G56690 30.890 191 119 7 17 198 4 190 3.30e-15 77.4
MS.gene056517.t1 AT4G09920 27.211 294 174 14 15 280 2 283 3.61e-15 76.6
MS.gene056517.t1 AT4G09920 27.211 294 174 14 15 280 2 283 3.61e-15 76.6
MS.gene056517.t1 AT5G56370 25.280 447 278 16 15 432 2 421 4.43e-15 77.4
MS.gene056517.t1 AT5G56370 25.280 447 278 16 15 432 2 421 4.43e-15 77.4
MS.gene056517.t1 AT5G22660 25.108 462 270 20 14 429 12 443 5.91e-15 77.0
MS.gene056517.t1 AT1G06630 27.642 369 203 16 14 342 11 355 1.28e-14 75.5
MS.gene056517.t1 AT1G06630 27.642 369 203 16 14 342 11 355 1.28e-14 75.5
MS.gene056517.t1 AT2G29930 25.309 486 275 23 5 431 2 458 1.33e-14 75.9
MS.gene056517.t1 AT2G29930 25.309 486 275 23 5 431 2 458 1.33e-14 75.9
MS.gene056517.t1 AT3G42770 27.352 457 243 20 17 424 1 417 1.93e-14 75.9
MS.gene056517.t1 AT5G18780 25.108 462 279 16 8 429 4 438 2.97e-14 74.7
MS.gene056517.t1 AT5G18780 25.108 462 279 16 8 429 4 438 2.97e-14 74.7
MS.gene056517.t1 AT5G41840 30.693 202 118 10 15 197 14 212 2.98e-14 75.1
MS.gene056517.t1 AT1G06630 27.493 371 205 16 15 345 12 358 3.29e-14 74.3
MS.gene056517.t1 AT1G06630 27.493 371 205 16 15 345 12 358 3.29e-14 74.3
MS.gene056517.t1 AT1G06630 27.493 371 205 16 15 345 12 358 3.29e-14 74.3
MS.gene056517.t1 AT1G06630 27.493 371 205 16 15 345 12 358 3.29e-14 74.3
MS.gene056517.t1 AT1G06630 27.493 371 205 16 15 345 21 367 3.97e-14 74.3
MS.gene056517.t1 AT1G13780 25.346 434 254 18 15 399 10 422 4.89e-14 74.3
MS.gene056517.t1 AT5G50270 33.333 213 114 10 15 212 2 201 4.91e-14 73.2
MS.gene056517.t1 AT3G59190 29.469 207 123 8 5 195 2 201 5.75e-14 73.6
MS.gene056517.t1 AT3G59190 29.469 207 123 8 5 195 2 201 5.94e-14 74.3
MS.gene056517.t1 AT1G06630 27.671 365 200 16 15 339 12 352 8.13e-14 73.6
MS.gene056517.t1 AT5G22700 31.720 186 113 6 15 195 6 182 1.24e-13 72.8
MS.gene056517.t1 AT5G22700 31.720 186 113 6 15 195 6 182 1.24e-13 72.8
MS.gene056517.t1 AT5G22700 31.720 186 113 6 15 195 6 182 1.24e-13 72.8
MS.gene056517.t1 AT5G22700 31.720 186 113 6 15 195 6 182 1.24e-13 72.8
MS.gene056517.t1 AT1G66310 27.484 473 265 27 1 429 1 439 1.28e-13 72.8
MS.gene056517.t1 AT1G55660 32.474 194 115 9 15 198 53 240 1.30e-13 72.4
MS.gene056517.t1 AT5G22700 31.720 186 113 6 15 195 43 219 1.39e-13 72.8
MS.gene056517.t1 AT1G55660 32.474 194 115 9 15 198 53 240 1.65e-13 72.8
MS.gene056517.t1 AT4G15060 30.570 193 119 8 12 195 23 209 2.80e-13 71.6
MS.gene056517.t1 AT5G18780 29.825 228 142 7 8 228 4 220 2.83e-13 71.6
MS.gene056517.t1 AT5G18780 29.825 228 142 7 8 228 4 220 2.83e-13 71.6
MS.gene056517.t1 AT5G35995 30.472 233 141 11 14 239 4 222 4.11e-13 71.2
MS.gene056517.t1 AT5G35995 30.472 233 141 11 14 239 4 222 4.11e-13 71.2
MS.gene056517.t1 AT4G00315 33.508 191 111 9 15 195 2 186 4.97e-13 70.9
MS.gene056517.t1 AT5G56390 29.060 468 236 28 15 431 2 424 5.25e-13 70.9
MS.gene056517.t1 AT5G56560 29.688 256 150 11 12 255 2 239 8.11e-13 70.9
MS.gene056517.t1 AT4G15060 30.526 190 117 8 15 195 172 355 1.10e-12 70.1
MS.gene056517.t1 AT3G58860 29.412 238 145 10 11 235 3 230 1.69e-12 69.3
MS.gene056517.t1 AT3G58980 26.652 469 261 24 15 430 2 440 1.83e-12 69.7
MS.gene056517.t1 AT1G06630 27.541 305 169 13 15 286 12 297 1.98e-12 68.2
MS.gene056517.t1 AT4G13960 31.915 235 132 9 15 235 2 222 3.30e-12 68.6
MS.gene056517.t1 AT4G13960 31.915 235 132 9 15 235 2 222 3.30e-12 68.6
MS.gene056517.t1 AT3G59210 32.821 195 115 7 14 197 6 195 6.67e-12 67.8
MS.gene056517.t1 AT3G59210 32.821 195 115 7 14 197 6 195 6.67e-12 67.8
MS.gene056517.t1 AT3G59210 32.821 195 115 7 14 197 6 195 6.67e-12 67.8
MS.gene056517.t1 AT3G59210 32.821 195 115 7 14 197 6 195 6.67e-12 67.8
MS.gene056517.t1 AT3G59210 32.821 195 115 7 14 197 6 195 6.67e-12 67.8
MS.gene056517.t1 AT2G42720 30.928 194 122 4 15 198 2 193 1.02e-11 67.0
MS.gene056517.t1 AT4G00320 27.948 229 135 11 15 222 13 232 1.46e-11 66.6
MS.gene056517.t1 AT2G04230 24.515 412 278 16 7 395 3 404 2.33e-11 65.9
MS.gene056517.t1 AT3G59230 29.293 198 121 7 14 195 11 205 2.36e-11 65.9
MS.gene056517.t1 AT3G58880 25.225 444 248 19 15 401 3 419 2.51e-11 65.9
MS.gene056517.t1 AT5G62970 25.161 465 282 17 15 431 2 448 3.64e-11 65.5
MS.gene056517.t1 AT5G56410 26.291 426 257 16 22 407 10 418 5.27e-11 65.1
MS.gene056517.t1 AT1G58310 25.472 318 168 13 11 280 4 300 6.59e-11 64.7
MS.gene056517.t1 AT5G22660 30.481 187 116 6 14 195 12 189 8.19e-11 63.5
MS.gene056517.t1 AT5G41630 29.000 200 119 7 14 195 11 205 9.21e-11 63.9

Find 109 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCACAGCTCAAACATTT+TGG 0.159569 8.3:+31845296 None:intergenic
TGAGAGTTTGCACCTTAATT+TGG 0.205840 8.3:+31843521 None:intergenic
CGTTCTAAACGTCGATGATT+TGG 0.278671 8.3:-31845232 MS.gene056517:CDS
CGTTGGCAACTTTCATAGTA+TGG 0.291851 8.3:-31844326 MS.gene056517:CDS
CCAGCTCCGTCTCCAAATTA+AGG 0.329783 8.3:-31843533 None:intergenic
CTGCTTCAACTCGAATCTTC+TGG 0.334716 8.3:-31844009 MS.gene056517:CDS
CTCACAGGTGGCGACACCTC+TGG 0.355297 8.3:-31845470 MS.gene056517:CDS
GAGAATGTTGAACTTTGATA+TGG 0.365796 8.3:+31844590 None:intergenic
GGAAGAGGTTGTTGAGAATA+GGG 0.378113 8.3:+31844254 None:intergenic
AACCATCACCGTTGAGAACT+TGG 0.381357 8.3:-31843799 MS.gene056517:CDS
TTGGGAGGAAGGAGAGTATA+TGG 0.397738 8.3:+31845526 None:intergenic
AACTCTGGATAATTTAGAAC+AGG 0.400095 8.3:+31844065 None:intergenic
CCTTAATTTGGAGACGGAGC+TGG 0.403747 8.3:+31843533 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.413834 8.3:+31843967 None:intergenic
ATTCACATTGAAGGATATCA+AGG 0.416044 8.3:-31843725 MS.gene056517:CDS
TGGAAGAGGTTGTTGAGAAT+AGG 0.418982 8.3:+31844253 None:intergenic
CTGACTTATATTCACATTGA+AGG 0.419150 8.3:-31843734 MS.gene056517:CDS
ATTGGTGGATTTCAAGCTCT+TGG 0.419320 8.3:+31844405 None:intergenic
CTGTGGTTCCGTGCTGCCAC+TGG 0.421703 8.3:-31845282 MS.gene056517:CDS
GGACCGATTGAGTAGTTTAC+CGG 0.425932 8.3:-31845562 MS.gene056517:CDS
CAGTTGATGAAGAGGGAAGG+AGG 0.429220 8.3:+31845201 None:intergenic
TGAAATAAATTGCGAAACTC+TGG 0.431497 8.3:+31844050 None:intergenic
CGTTCAAAGATAAGTCTTCA+AGG 0.436000 8.3:+31844455 None:intergenic
ACACCTCTGGGAGCATCTCC+AGG 0.444775 8.3:-31845457 MS.gene056517:CDS
GGAGAGTATATGGCATAGAA+TGG 0.444991 8.3:+31845536 None:intergenic
ACGGAACTTACGAATGTTGC+GGG 0.449382 8.3:+31845341 None:intergenic
CCACCAATCACAATTTCACT+TGG 0.457987 8.3:-31844390 MS.gene056517:CDS
GCCAACGATGCCCATGGCAT+GGG 0.458840 8.3:+31844342 None:intergenic
TACGAATGTTGCGGGATCTA+CGG 0.459610 8.3:+31845349 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.459725 8.3:+31844010 None:intergenic
CTTAATTTGGAGACGGAGCT+GGG 0.467049 8.3:+31843534 None:intergenic
TCACAGGTGGCGACACCTCT+GGG 0.473183 8.3:-31845469 MS.gene056517:CDS
AGTTGATGAAGAGGGAAGGA+GGG 0.475091 8.3:+31845202 None:intergenic
CCCCATGCCATGGGCATCGT+TGG 0.477463 8.3:-31844343 MS.gene056517:CDS
AGATCCAGAGTTTCTAGCAC+TGG 0.481633 8.3:+31844487 None:intergenic
AGGTCTTCGACTTTGACGAC+TGG 0.482564 8.3:-31845437 MS.gene056517:CDS
TCGCATGACACAGAACCCTT+TGG 0.490917 8.3:+31843569 None:intergenic
CTTCAATGTGAATATAAGTC+AGG 0.492415 8.3:+31843735 None:intergenic
ATGTCAAATGACGCGAAAGT+AGG 0.492783 8.3:+31844206 None:intergenic
GAGCTGAAGGAAGGTGGAAT+GGG 0.492788 8.3:+31844427 None:intergenic
TGCCAACGATGCCCATGGCA+TGG 0.494789 8.3:+31844341 None:intergenic
TTTCAAGCTCTTGGAGCTGA+AGG 0.498482 8.3:+31844414 None:intergenic
CCAAGTGAAATTGTGATTGG+TGG 0.503707 8.3:+31844390 None:intergenic
GGAGCTGAAGGAAGGTGGAA+TGG 0.513985 8.3:+31844426 None:intergenic
TTGTGACGGAGGTTCGAGTT+GGG 0.515633 8.3:+31845508 None:intergenic
TTCTTGAAGGTGGGGACCAG+TGG 0.516341 8.3:+31845266 None:intergenic
GAGAGAGAGTTCTTGAAGGT+GGG 0.520309 8.3:+31845257 None:intergenic
CGGTGAGAGAGAGTTCTTGA+AGG 0.520852 8.3:+31845253 None:intergenic
ACCGTTGAGAACTTGGGAGC+CGG 0.521091 8.3:-31843792 MS.gene056517:CDS
CTGCCCAGTGCTAGAAACTC+TGG 0.527934 8.3:-31844491 MS.gene056517:CDS
TCCCAAGTTCTCAACGGTGA+TGG 0.531325 8.3:+31843797 None:intergenic
AGTTTGAGTCTCTTGAGTGA+TGG 0.537670 8.3:+31844556 None:intergenic
CAGAGTTTCTAGCACTGGGC+AGG 0.539705 8.3:+31844492 None:intergenic
TGTTAATACTGCAGTCTGCA+TGG 0.541343 8.3:-31844622 MS.gene056517:intron
GGAGGTTCGAGTTGGGAGGA+AGG 0.547871 8.3:+31845515 None:intergenic
TTCGCGTCATTTGACATCAA+AGG 0.548380 8.3:-31844200 MS.gene056517:intron
CCGTCTCAACTGTGATTACC+CGG 0.548978 8.3:-31845322 MS.gene056517:CDS
TTGCAGTTGATGAAGAGGGA+AGG 0.550454 8.3:+31845198 None:intergenic
AGATTGACTGACATACCAAA+GGG 0.555026 8.3:-31843584 MS.gene056517:CDS
ATTGTGACGGAGGTTCGAGT+TGG 0.555423 8.3:+31845507 None:intergenic
GCAACAACCTCGTTTCCCTC+CGG 0.555731 8.3:-31845179 MS.gene056517:intron
AAGCTCTTGGAGCTGAAGGA+AGG 0.556513 8.3:+31844418 None:intergenic
GATATATATCCCCATGCCAT+GGG 0.557465 8.3:-31844352 MS.gene056517:CDS
TGAGAGAGAGTTCTTGAAGG+TGG 0.559302 8.3:+31845256 None:intergenic
TGATATATATCCCCATGCCA+TGG 0.559722 8.3:-31844353 MS.gene056517:CDS
GGTCTTCGACTTTGACGACT+GGG 0.561876 8.3:-31845436 MS.gene056517:CDS
AGTCCGGTAAACTACTCAAT+CGG 0.563071 8.3:+31845559 None:intergenic
AGAGAGAGTTCTTGAAGGTG+GGG 0.563610 8.3:+31845258 None:intergenic
TCAGAAACTGTTGTTGACTC+CGG 0.563716 8.3:+31843773 None:intergenic
CGGAGTCAAGCTTGCAACGG+TGG 0.571262 8.3:-31845599 MS.gene056517:CDS
ACCATCACCGTTGAGAACTT+GGG 0.571797 8.3:-31843798 MS.gene056517:CDS
TCACTCAAGAGACTCAAACT+TGG 0.571944 8.3:-31844553 MS.gene056517:CDS
CTCTTGGAGCTGAAGGAAGG+TGG 0.572877 8.3:+31844421 None:intergenic
AGTCGTCAAAGTCGAAGACC+TGG 0.577295 8.3:+31845439 None:intergenic
GATCCAGAGTTTCTAGCACT+GGG 0.579142 8.3:+31844488 None:intergenic
GGTTGTTGCAGTTGATGAAG+AGG 0.580839 8.3:+31845193 None:intergenic
ATCCCAAAATGTTTGAGCTG+TGG 0.581048 8.3:-31845299 MS.gene056517:CDS
TTATGACTCTCGTCTCTCAC+AGG 0.582125 8.3:-31845485 MS.gene056517:CDS
TTTGCACCTTAATTTGGAGA+CGG 0.584664 8.3:+31843527 None:intergenic
AGTCCAAGTGAAATTGTGAT+TGG 0.586178 8.3:+31844387 None:intergenic
TTTAGAACAGGGGCGTGAAG+TGG 0.587745 8.3:+31844077 None:intergenic
CAAATCATCGACGTTTAGAA+CGG 0.588372 8.3:+31845233 None:intergenic
TTGAGTGATGGAAAATGAAG+TGG 0.593301 8.3:+31844568 None:intergenic
CAATGTGAATATAAGTCAGG+TGG 0.596431 8.3:+31843738 None:intergenic
ATATGGCATAGAATGGAGTC+CGG 0.596950 8.3:+31845543 None:intergenic
GTTGTTGCAGTTGATGAAGA+GGG 0.600653 8.3:+31845194 None:intergenic
GACAAATTCACTTTCACGTG+AGG 0.601494 8.3:+31844279 None:intergenic
GACGAGAGTCATAATTGTGA+CGG 0.601855 8.3:+31845494 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.608111 8.3:+31844011 None:intergenic
GACGGAACTTACGAATGTTG+CGG 0.610282 8.3:+31845340 None:intergenic
TCCGGCTCCCAAGTTCTCAA+CGG 0.611432 8.3:+31843791 None:intergenic
TGACGGAGGTTCGAGTTGGG+AGG 0.611461 8.3:+31845511 None:intergenic
AAGATTGACTGACATACCAA+AGG 0.615806 8.3:-31843585 MS.gene056517:CDS
CCGGGTAATCACAGTTGAGA+CGG 0.616919 8.3:+31845322 None:intergenic
AAAGTTGCCAACGATGCCCA+TGG 0.622590 8.3:+31844336 None:intergenic
GGTGGGGACCAGTGGCAGCA+CGG 0.627255 8.3:+31845274 None:intergenic
CCAACGATGCCCATGGCATG+GGG 0.628812 8.3:+31844343 None:intergenic
TCTCATAATTAAGAGCAGCA+AGG 0.629918 8.3:-31843952 MS.gene056517:intron
TGGCAACTTTCATAGTATGG+TGG 0.634902 8.3:-31844323 MS.gene056517:CDS
GTTAGTACCGGAGGGAAACG+AGG 0.636742 8.3:+31845172 None:intergenic
AATGTGAATATAAGTCAGGT+GGG 0.643217 8.3:+31843739 None:intergenic
ACGGTGGAAAGCAGAAGAAG+AGG 0.651600 8.3:-31845583 MS.gene056517:CDS
CAAACTTGGTGTAGAGACTG+TGG 0.652029 8.3:-31844539 MS.gene056517:CDS
TGGCGGAGTCAAGCTTGCAA+CGG 0.662737 8.3:-31845602 MS.gene056517:CDS
ACTCTGGATAATTTAGAACA+GGG 0.667989 8.3:+31844066 None:intergenic
TGACTCTCGTCTCTCACAGG+TGG 0.668779 8.3:-31845482 MS.gene056517:CDS
CTCTGGATAATTTAGAACAG+GGG 0.675675 8.3:+31844067 None:intergenic
GAGAGTCATAATTGTGACGG+AGG 0.689058 8.3:+31845497 None:intergenic
AGACCTGGAGATGCTCCCAG+AGG 0.734065 8.3:+31845454 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTTATATATGTAGT+TGG - chr8.3:31844995-31845014 MS.gene056517:intron 10.0%
!!! AGTTTAATTTAATCAATATT+TGG - chr8.3:31845224-31845243 MS.gene056517:CDS 10.0%
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.3:31845502-31845521 MS.gene056517:CDS 15.0%
!! ATAGTAACTGTATAAACTTA+GGG - chr8.3:31844042-31844061 MS.gene056517:CDS 20.0%
!! GAAAACAAAATCTAAAAATG+AGG + chr8.3:31844125-31844144 None:intergenic 20.0%
!!! ACAAATATATTTTTGAGTTG+TGG - chr8.3:31845288-31845307 MS.gene056517:CDS 20.0%
!!! CCATTTTTTTTATTCATAGT+CGG - chr8.3:31844004-31844023 MS.gene056517:CDS 20.0%
!!! TTTCATTGTTTTTGTTATCT+TGG + chr8.3:31844908-31844927 None:intergenic 20.0%
! AAAATGGAGAGATTGAAATT+AGG + chr8.3:31843991-31844010 None:intergenic 25.0%
! ATAGGTTTGTGAATGAAAAT+AGG + chr8.3:31844148-31844167 None:intergenic 25.0%
! CATAGTAACTGTATAAACTT+AGG - chr8.3:31844041-31844060 MS.gene056517:CDS 25.0%
! CCGACTATGAATAAAAAAAA+TGG + chr8.3:31844007-31844026 None:intergenic 25.0%
! TAGGTTTGTGAATGAAAATA+GGG + chr8.3:31844147-31844166 None:intergenic 25.0%
! TAGTAACTGTATAAACTTAG+GGG - chr8.3:31844043-31844062 MS.gene056517:CDS 25.0%
!! CATAGCACTACTTTATTTAT+AGG + chr8.3:31844166-31844185 None:intergenic 25.0%
!! TTAATGGTGGAAATGAAATT+TGG - chr8.3:31844382-31844401 MS.gene056517:CDS 25.0%
!! TTCTTTATTTGTTTCAGTGT+TGG + chr8.3:31844475-31844494 None:intergenic 25.0%
!!! AAATACACTTGTTTTAATGG+TGG - chr8.3:31844369-31844388 MS.gene056517:CDS 25.0%
!!! AAGGTGAAGTTGTATTTTTA+TGG - chr8.3:31844957-31844976 MS.gene056517:intron 25.0%
!!! CATTTGCTGAATATATTTTG+CGG - chr8.3:31845453-31845472 MS.gene056517:CDS 25.0%
!!! TCGAAATACACTTGTTTTAA+TGG - chr8.3:31844366-31844385 MS.gene056517:CDS 25.0%
AATGTGAATATAAGTCAGGT+GGG + chr8.3:31845402-31845421 None:intergenic 30.0%
ATTCACATTGAAGGATATCA+AGG - chr8.3:31845413-31845432 MS.gene056517:CDS 30.0%
CTGACTTATATTCACATTGA+AGG - chr8.3:31845404-31845423 MS.gene056517:CDS 30.0%
CTTCAATGTGAATATAAGTC+AGG + chr8.3:31845406-31845425 None:intergenic 30.0%
GAGAATGTTGAACTTTGATA+TGG + chr8.3:31844551-31844570 None:intergenic 30.0%
GATTGAAATTAGGTTAGTAC+CGG + chr8.3:31843981-31844000 None:intergenic 30.0%
TGAAATAAATTGCGAAACTC+TGG + chr8.3:31845091-31845110 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG + chr8.3:31845174-31845193 None:intergenic 30.0%
! AAACTTTTGTCGTAAAAGTG+AGG + chr8.3:31843730-31843749 None:intergenic 30.0%
! AACTCTGGATAATTTAGAAC+AGG + chr8.3:31845076-31845095 None:intergenic 30.0%
! ACTCTGGATAATTTAGAACA+GGG + chr8.3:31845075-31845094 None:intergenic 30.0%
! TTTTTATTCATAGTCGGACT+AGG - chr8.3:31844010-31844029 MS.gene056517:CDS 30.0%
!! AATGAGGAAAGTACCAAATT+AGG + chr8.3:31844109-31844128 None:intergenic 30.0%
!! ATGAGGAAAGTACCAAATTA+GGG + chr8.3:31844108-31844127 None:intergenic 30.0%
!! TGTTTTTGTTATCTTGGAAG+AGG + chr8.3:31844902-31844921 None:intergenic 30.0%
!!! TATATTTTTGAGTTGTGGCA+CGG - chr8.3:31845293-31845312 MS.gene056517:CDS 30.0%
AAGATTGACTGACATACCAA+AGG - chr8.3:31845553-31845572 MS.gene056517:CDS 35.0%
AGATTGACTGACATACCAAA+GGG - chr8.3:31845554-31845573 MS.gene056517:CDS 35.0%
AGTCCAAGTGAAATTGTGAT+TGG + chr8.3:31844754-31844773 None:intergenic 35.0%
ATGTACACGATAACAAGTGA+TGG + chr8.3:31845034-31845053 None:intergenic 35.0%
CAAATCATCGACGTTTAGAA+CGG + chr8.3:31843908-31843927 None:intergenic 35.0%
CAATGTGAATATAAGTCAGG+TGG + chr8.3:31845403-31845422 None:intergenic 35.0%
CGTTCAAAGATAAGTCTTCA+AGG + chr8.3:31844686-31844705 None:intergenic 35.0%
CTGCAGTATTAACAAAAGAC+AGG + chr8.3:31844510-31844529 None:intergenic 35.0%
GGGAACAAGAGATGAAATTA+TGG + chr8.3:31844443-31844462 None:intergenic 35.0%
TCTCATAATTAAGAGCAGCA+AGG - chr8.3:31845186-31845205 MS.gene056517:CDS 35.0%
TGTTAGACAAAGCCCTAATT+TGG - chr8.3:31844093-31844112 MS.gene056517:intron 35.0%
! AACCACAGCTCAAACATTTT+GGG + chr8.3:31843844-31843863 None:intergenic 35.0%
! CTCTGGATAATTTAGAACAG+GGG + chr8.3:31845074-31845093 None:intergenic 35.0%
! GCTGAATATATTTTGCGGAA+CGG - chr8.3:31845458-31845477 MS.gene056517:CDS 35.0%
! TTCAGTGTTGGAAGTAGAAA+GGG + chr8.3:31844463-31844482 None:intergenic 35.0%
! TTGAGTGATGGAAAATGAAG+TGG + chr8.3:31844573-31844592 None:intergenic 35.0%
! TTTCAGTGTTGGAAGTAGAA+AGG + chr8.3:31844464-31844483 None:intergenic 35.0%
AACTCTACCTCTATGAAGCA+CGG + chr8.3:31844302-31844321 None:intergenic 40.0%
ACATGCACAAGCAAGCAAAA+TGG + chr8.3:31844076-31844095 None:intergenic 40.0%
AGTCCGGTAAACTACTCAAT+CGG + chr8.3:31843582-31843601 None:intergenic 40.0%
AGTTTGAGTCTCTTGAGTGA+TGG + chr8.3:31844585-31844604 None:intergenic 40.0%
ATATGGCATAGAATGGAGTC+CGG + chr8.3:31843598-31843617 None:intergenic 40.0%
ATCCCAAAATGTTTGAGCTG+TGG - chr8.3:31843839-31843858 MS.gene056517:intron 40.0%
ATGTCAAATGACGCGAAAGT+AGG + chr8.3:31844935-31844954 None:intergenic 40.0%
CCAAGTGAAATTGTGATTGG+TGG + chr8.3:31844751-31844770 None:intergenic 40.0%
CCACCAATCACAATTTCACT+TGG - chr8.3:31844748-31844767 MS.gene056517:intron 40.0%
CGTTGGCAACTTTCATAGTA+TGG - chr8.3:31844812-31844831 MS.gene056517:intron 40.0%
GACAAATTCACTTTCACGTG+AGG + chr8.3:31844862-31844881 None:intergenic 40.0%
GACGAGAGTCATAATTGTGA+CGG + chr8.3:31843647-31843666 None:intergenic 40.0%
GATATATATCCCCATGCCAT+GGG - chr8.3:31844786-31844805 MS.gene056517:intron 40.0%
GGAAGAGGTTGTTGAGAATA+GGG + chr8.3:31844887-31844906 None:intergenic 40.0%
GTTCCTCCTACAAGTAACAA+TGG + chr8.3:31845322-31845341 None:intergenic 40.0%
TCACTCAAGAGACTCAAACT+TGG - chr8.3:31844585-31844604 MS.gene056517:CDS 40.0%
TGATATATATCCCCATGCCA+TGG - chr8.3:31844785-31844804 MS.gene056517:intron 40.0%
TGGAAGAGGTTGTTGAGAAT+AGG + chr8.3:31844888-31844907 None:intergenic 40.0%
TGGCAACTTTCATAGTATGG+TGG - chr8.3:31844815-31844834 MS.gene056517:intron 40.0%
TGTTAATACTGCAGTCTGCA+TGG - chr8.3:31844516-31844535 MS.gene056517:CDS 40.0%
TTCGCGTCATTTGACATCAA+AGG - chr8.3:31844938-31844957 MS.gene056517:intron 40.0%
! CGTTCTAAACGTCGATGATT+TGG - chr8.3:31843906-31843925 MS.gene056517:intron 40.0%
! GAAATTAGGTTAGTACCGGA+GGG + chr8.3:31843977-31843996 None:intergenic 40.0%
! GAACCACAGCTCAAACATTT+TGG + chr8.3:31843845-31843864 None:intergenic 40.0%
! GGAGAGTATATGGCATAGAA+TGG + chr8.3:31843605-31843624 None:intergenic 40.0%
! TGAAATTAGGTTAGTACCGG+AGG + chr8.3:31843978-31843997 None:intergenic 40.0%
! TGTCCATTGTTACTTGTAGG+AGG - chr8.3:31845316-31845335 MS.gene056517:CDS 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr8.3:31845130-31845149 None:intergenic 40.0%
!! ATGAAAGCACTTACACGACA+TGG - chr8.3:31844183-31844202 MS.gene056517:intron 40.0%
!! ATTGGTGGATTTCAAGCTCT+TGG + chr8.3:31844736-31844755 None:intergenic 40.0%
!! GTTGTTGCAGTTGATGAAGA+GGG + chr8.3:31843947-31843966 None:intergenic 40.0%
!! TCAGAAACTGTTGTTGACTC+CGG + chr8.3:31845368-31845387 None:intergenic 40.0%
!!! AGCTCAAACATTTTGGGATC+CGG + chr8.3:31843838-31843857 None:intergenic 40.0%
AACCATCACCGTTGAGAACT+TGG - chr8.3:31845339-31845358 MS.gene056517:CDS 45.0%
ACACAGACACTCTTCGGATT+AGG + chr8.3:31844220-31844239 None:intergenic 45.0%
ACCATCACCGTTGAGAACTT+GGG - chr8.3:31845340-31845359 MS.gene056517:CDS 45.0%
ACGGAACTTACGAATGTTGC+GGG + chr8.3:31843800-31843819 None:intergenic 45.0%
AGAGAGAGTTCTTGAAGGTG+GGG + chr8.3:31843883-31843902 None:intergenic 45.0%
CTGCTTCAACTCGAATCTTC+TGG - chr8.3:31845129-31845148 MS.gene056517:intron 45.0%
GACGGAACTTACGAATGTTG+CGG + chr8.3:31843801-31843820 None:intergenic 45.0%
GAGAGAGAGTTCTTGAAGGT+GGG + chr8.3:31843884-31843903 None:intergenic 45.0%
GAGAGTCATAATTGTGACGG+AGG + chr8.3:31843644-31843663 None:intergenic 45.0%
GATTAAGTGTGTCCTGGTGT+CGG + chr8.3:31844269-31844288 None:intergenic 45.0%
GGACCGATTGAGTAGTTTAC+CGG - chr8.3:31843576-31843595 MS.gene056517:CDS 45.0%
TACGAATGTTGCGGGATCTA+CGG + chr8.3:31843792-31843811 None:intergenic 45.0%
TATGAAGCACGGACACTCTT+CGG + chr8.3:31844291-31844310 None:intergenic 45.0%
TCTTCGGATTAAGTGTGTCC+TGG + chr8.3:31844275-31844294 None:intergenic 45.0%
TGAGAGAGAGTTCTTGAAGG+TGG + chr8.3:31843885-31843904 None:intergenic 45.0%
TTATGACTCTCGTCTCTCAC+AGG - chr8.3:31843653-31843672 MS.gene056517:CDS 45.0%
TTTCAAGCTCTTGGAGCTGA+AGG + chr8.3:31844727-31844746 None:intergenic 45.0%
! CGGTGTCCATTGTTACTTGT+AGG - chr8.3:31845313-31845332 MS.gene056517:CDS 45.0%
! TTGGGAGGAAGGAGAGTATA+TGG + chr8.3:31843615-31843634 None:intergenic 45.0%
!! AATCCGAAGAGTGTCTGTGT+CGG - chr8.3:31844220-31844239 MS.gene056517:CDS 45.0%
!! AGATCCAGAGTTTCTAGCAC+TGG + chr8.3:31844654-31844673 None:intergenic 45.0%
!! AGTTGATGAAGAGGGAAGGA+GGG + chr8.3:31843939-31843958 None:intergenic 45.0%
!! CAAACTTGGTGTAGAGACTG+TGG - chr8.3:31844599-31844618 MS.gene056517:CDS 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr8.3:31845131-31845150 None:intergenic 45.0%
!! GATCCAGAGTTTCTAGCACT+GGG + chr8.3:31844653-31844672 None:intergenic 45.0%
!! GGTTGTTGCAGTTGATGAAG+AGG + chr8.3:31843948-31843967 None:intergenic 45.0%
!! TTGCAGTTGATGAAGAGGGA+AGG + chr8.3:31843943-31843962 None:intergenic 45.0%
!!! GCTCAAACATTTTGGGATCC+GGG + chr8.3:31843837-31843856 None:intergenic 45.0%
AAAGTTGCCAACGATGCCCA+TGG + chr8.3:31844805-31844824 None:intergenic 50.0%
AAGCTCTTGGAGCTGAAGGA+AGG + chr8.3:31844723-31844742 None:intergenic 50.0%
ACACCGACACAGACACTCTT+CGG + chr8.3:31844226-31844245 None:intergenic 50.0%
ACGGTGGAAAGCAGAAGAAG+AGG - chr8.3:31843555-31843574 MS.gene056517:CDS 50.0%
AGGTCTTCGACTTTGACGAC+TGG - chr8.3:31843701-31843720 MS.gene056517:CDS 50.0%
AGTCGTCAAAGTCGAAGACC+TGG + chr8.3:31843702-31843721 None:intergenic 50.0%
CCGGGTAATCACAGTTGAGA+CGG + chr8.3:31843819-31843838 None:intergenic 50.0%
CCGTCTCAACTGTGATTACC+CGG - chr8.3:31843816-31843835 MS.gene056517:intron 50.0%
CGGTGAGAGAGAGTTCTTGA+AGG + chr8.3:31843888-31843907 None:intergenic 50.0%
GAGCTGAAGGAAGGTGGAAT+GGG + chr8.3:31844714-31844733 None:intergenic 50.0%
GGTCTTCGACTTTGACGACT+GGG - chr8.3:31843702-31843721 MS.gene056517:CDS 50.0%
TCCCAAGTTCTCAACGGTGA+TGG + chr8.3:31845344-31845363 None:intergenic 50.0%
TCGCATGACACAGAACCCTT+TGG + chr8.3:31845572-31845591 None:intergenic 50.0%
! AGAGTGTCCGTGCTTCATAG+AGG - chr8.3:31844292-31844311 MS.gene056517:CDS 50.0%
! ATTGTGACGGAGGTTCGAGT+TGG + chr8.3:31843634-31843653 None:intergenic 50.0%
! TTGTGACGGAGGTTCGAGTT+GGG + chr8.3:31843633-31843652 None:intergenic 50.0%
! TTTAGAACAGGGGCGTGAAG+TGG + chr8.3:31845064-31845083 None:intergenic 50.0%
!! AAGAGTGTCTGTGTCGGTGT+CGG - chr8.3:31844226-31844245 MS.gene056517:CDS 50.0%
!! CAGTTGATGAAGAGGGAAGG+AGG + chr8.3:31843940-31843959 None:intergenic 50.0%
ACCGTTGAGAACTTGGGAGC+CGG - chr8.3:31845346-31845365 MS.gene056517:CDS 55.0%
CTCTTGGAGCTGAAGGAAGG+TGG + chr8.3:31844720-31844739 None:intergenic 55.0%
CTGCCCAGTGCTAGAAACTC+TGG - chr8.3:31844647-31844666 MS.gene056517:intron 55.0%
GCAACAACCTCGTTTCCCTC+CGG - chr8.3:31843959-31843978 MS.gene056517:CDS 55.0%
GGAGCTGAAGGAAGGTGGAA+TGG + chr8.3:31844715-31844734 None:intergenic 55.0%
TCCGGCTCCCAAGTTCTCAA+CGG + chr8.3:31845350-31845369 None:intergenic 55.0%
TGACTCTCGTCTCTCACAGG+TGG - chr8.3:31843656-31843675 MS.gene056517:CDS 55.0%
TGGCGGAGTCAAGCTTGCAA+CGG - chr8.3:31843536-31843555 MS.gene056517:CDS 55.0%
TTCTTGAAGGTGGGGACCAG+TGG + chr8.3:31843875-31843894 None:intergenic 55.0%
! GTTAGTACCGGAGGGAAACG+AGG + chr8.3:31843969-31843988 None:intergenic 55.0%
! TCCTGGTGTCGGACATGTGT+CGG + chr8.3:31844258-31844277 None:intergenic 55.0%
!! CAGAGTTTCTAGCACTGGGC+AGG + chr8.3:31844649-31844668 None:intergenic 55.0%
ACCGACACATGTCCGACACC+AGG - chr8.3:31844254-31844273 MS.gene056517:CDS 60.0%
AGACCTGGAGATGCTCCCAG+AGG + chr8.3:31843687-31843706 None:intergenic 60.0%
CCAACGATGCCCATGGCATG+GGG + chr8.3:31844798-31844817 None:intergenic 60.0%
CGGAGTCAAGCTTGCAACGG+TGG - chr8.3:31843539-31843558 MS.gene056517:CDS 60.0%
GCCAACGATGCCCATGGCAT+GGG + chr8.3:31844799-31844818 None:intergenic 60.0%
TCACAGGTGGCGACACCTCT+GGG - chr8.3:31843669-31843688 MS.gene056517:CDS 60.0%
TGCCAACGATGCCCATGGCA+TGG + chr8.3:31844800-31844819 None:intergenic 60.0%
! TGGTGTCGGACATGTGTCGG+TGG + chr8.3:31844255-31844274 None:intergenic 60.0%
!! ACACCTCTGGGAGCATCTCC+AGG - chr8.3:31843681-31843700 MS.gene056517:CDS 60.0%
!! GGAGGTTCGAGTTGGGAGGA+AGG + chr8.3:31843626-31843645 None:intergenic 60.0%
!! TGACGGAGGTTCGAGTTGGG+AGG + chr8.3:31843630-31843649 None:intergenic 60.0%
CTCACAGGTGGCGACACCTC+TGG - chr8.3:31843668-31843687 MS.gene056517:CDS 65.0%
CTGTGGTTCCGTGCTGCCAC+TGG - chr8.3:31843856-31843875 MS.gene056517:intron 65.0%
! CCCCATGCCATGGGCATCGT+TGG - chr8.3:31844795-31844814 MS.gene056517:intron 65.0%
GGTGGGGACCAGTGGCAGCA+CGG + chr8.3:31843867-31843886 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 31843535 31845625 31843535 ID=MS.gene056517
chr8.3 mRNA 31843535 31845625 31843535 ID=MS.gene056517.t1;Parent=MS.gene056517
chr8.3 exon 31845180 31845625 31845180 ID=MS.gene056517.t1.exon1;Parent=MS.gene056517.t1
chr8.3 CDS 31845180 31845625 31845180 ID=cds.MS.gene056517.t1;Parent=MS.gene056517.t1
chr8.3 exon 31844201 31844630 31844201 ID=MS.gene056517.t1.exon2;Parent=MS.gene056517.t1
chr8.3 CDS 31844201 31844630 31844201 ID=cds.MS.gene056517.t1;Parent=MS.gene056517.t1
chr8.3 exon 31843953 31844102 31843953 ID=MS.gene056517.t1.exon3;Parent=MS.gene056517.t1
chr8.3 CDS 31843953 31844102 31843953 ID=cds.MS.gene056517.t1;Parent=MS.gene056517.t1
chr8.3 exon 31843535 31843825 31843535 ID=MS.gene056517.t1.exon4;Parent=MS.gene056517.t1
chr8.3 CDS 31843535 31843825 31843535 ID=cds.MS.gene056517.t1;Parent=MS.gene056517.t1
Gene Sequence

>MS.gene056517

ATGGCGGAGTCAAGCTTGCAACGGTGGAAAGCAGAAGAAGAGGACCGATTGAGTAGTTTACCGGACTCCATTCTATGCCATATACTCTCCTTCCTCCCAACTCGAACCTCCGTCACAATTATGACTCTCGTCTCTCACAGGTGGCGACACCTCTGGGAGCATCTCCAGGTCTTCGACTTTGACGACTGGGATCCTCACTTTTACGACAAAAGTTTCGAAAAGTTTGCATCATTCGTCAATGCTGTGCTCACTCTCCGTAGATCCCGCAACATTCGTAAGTTCCGTCTCAACTGTGATTACCCGGATCCCAAAATGTTTGAGCTGTGGTTCCGTGCTGCCACTGGTCCCCACCTTCAAGAACTCTCTCTCACCGTTCTAAACGTCGATGATTTGGTTAAACTCCCTCCTTCCCTCTTCATCAACTGCAACAACCTCGTTTCCCTCCGGTACTAACCTAATTTCAATCTCTCCATTTTTTTTATTCATAGTCGGACTAGGACTAAATTCATAGTAACTGTATAAACTTAGGGGTGCAACACCATTTTGCTTGCTTGTGCATGTTAGACAAAGCCCTAATTTGGTACTTTCCTCATTTTTAGATTTTGTTTTCCCTATTTTCATTCACAAACCTATAAATAAAGTAGTGCTATGAAAGCACTTACACGACATGGACATCGACACGCCTAATCCGAAGAGTGTCTGTGTCGGTGTCGGTATCCACCGACACATGTCCGACACCAGGACACACTTAATCCGAAGAGTGTCCGTGCTTCATAGAGGTAGAGTTAGTCTCACTTTTGTTTCAAATTTGTTTTTATTTCTATGAAACTGTCGAAATACACTTGTTTTAATGGTGGAAATGAAATTTGGAATCATTTTACATATTATTATATCGATGCTCACTTCCATAATTTCATCTCTTGTTCCCTTTCTACTTCCAACACTGAAACAAATAAAGAATGTTATATATAACCTGTCTTTTGTTAATACTGCAGTCTGCATGGTGTACAAGTCCATATCAAAGTTCAACATTCTCCACTTCATTTTCCATCACTCAAGAGACTCAAACTTGGTGTAGAGACTGTGGATTCGATAGTTGCTTTTCTCTCTGCCTGCCCAGTGCTAGAAACTCTGGATCTTGACTTTTTCCTTGAAGACTTATCTTTGAACGAAGTTCCCATTCCACCTTCCTTCAGCTCCAAGAGCTTGAAATCCACCAATCACAATTTCACTTGGACTCACTTTAAGTTTGATATATATCCCCATGCCATGGGCATCGTTGGCAACTTTCATAGTATGGTGGAAGCATTTCTCGATGTCTTTTCCTCACGTGAAAGTGAATTTGTCGACCCTATTCTCAACAACCTCTTCCAAGATAACAAAAACAATGAAATAAACCTACTTTCGCGTCATTTGACATCAAAGGTGAAGTTGTATTTTTATGGTTTGTATTTTTTTTATATATATTTATATATGTAGTTGGTACTAATACTGCGCCATCACTTGTTATCGTGTACATGCAGTTGCCACTTCACGCCCCTGTTCTAAATTATCCAGAGTTTCGCAATTTATTTCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGGTCGACGTGCTTGAAAAATGCCATATGCTTCAAGTTCTCATAATTAAGAGCAGCAAGGTTTGTTGACTTCTCAAGTTTAATTTAATCAATATTTGGTATGTCTATATGTGCATGAATGTATGAATCTATTTGTACATACAAATATATTTTTGAGTTGTGGCACGGTGTCCATTGTTACTTGTAGGAGGAACCATCACCGTTGAGAACTTGGGAGCCGGAGTCAACAACAGTTTCTGAATGTCTCAAATCCCACCTGACTTATATTCACATTGAAGGATATCAAGGATTTGAAGATGAGCTGACATTTGCTGAATATATTTTGCGGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACAAAACAAACAAGTATTGTTCTCTCAAAAGATTGACTGACATACCAAAGGGTTCTGTGTCATGCGAACTTAAATTTGACCCAGCTCCGTCTCCAAATTAA

Protein sequence

>MS.gene056517.t1

MAESSLQRWKAEEEDRLSSLPDSILCHILSFLPTRTSVTIMTLVSHRWRHLWEHLQVFDFDDWDPHFYDKSFEKFASFVNAVLTLRRSRNIRKFRLNCDYPDPKMFELWFRAATGPHLQELSLTVLNVDDLVKLPPSLFINCNNLVSLRLHGVQVHIKVQHSPLHFPSLKRLKLGVETVDSIVAFLSACPVLETLDLDFFLEDLSLNEVPIPPSFSSKSLKSTNHNFTWTHFKFDIYPHAMGIVGNFHSMVEAFLDVFSSRESEFVDPILNNLFQDNKNNEINLLSRHLTSKLPLHAPVLNYPEFRNLFHLKFILPCFNSNLLVDVLEKCHMLQVLIIKSSKEEPSPLRTWEPESTTVSECLKSHLTYIHIEGYQGFEDELTFAEYILRNGLVLKTMLIFVDISMDKTNKYCSLKRLTDIPKGSVSCELKFDPAPSPN