AlfalfaGEDB | MS.gene072885

M. sativa cultivar XinJiangDaYe / MS.gene072885

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072885.t1	AES73648.2	98.1	264	5	0	1	264	126	389	3.90E-149	537.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072885.t1	Q8H1R7	28.5	309	165	8	3	258	114	419	3.9e-17	90.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072885.t1	G7JB20	98.1	264	5	0	1	264	126	389	2.8e-149	537.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene98324	MS.gene072885	PPI
MS.gene39749	MS.gene072885	PPI
MS.gene053313	MS.gene072885	PPI
MS.gene72962	MS.gene072885	PPI
MS.gene36807	MS.gene072885	PPI
MS.gene25396	MS.gene072885	PPI
MS.gene23706	MS.gene072885	PPI
MS.gene30260	MS.gene072885	PPI
MS.gene072885	MS.gene014841	PPI
MS.gene073176	MS.gene072885	PPI
MS.gene49018	MS.gene072885	PPI
MS.gene36743	MS.gene072885	PPI
MS.gene072885	MS.gene43257	PPI
MS.gene007794	MS.gene072885	PPI
MS.gene046838	MS.gene072885	PPI
MS.gene072885	MS.gene21682	PPI
MS.gene072885	MS.gene95710	PPI
MS.gene072244	MS.gene072885	PPI
MS.gene062526	MS.gene072885	PPI
MS.gene26069	MS.gene072885	PPI
MS.gene072885	MS.gene022921	PPI
MS.gene072885	MS.gene056133	PPI
MS.gene72963	MS.gene072885	PPI
MS.gene056517	MS.gene072885	PPI
MS.gene34735	MS.gene072885	PPI
MS.gene072885	MS.gene36809	PPI
MS.gene36809	MS.gene072885	PPI
MS.gene022916	MS.gene072885	PPI
MS.gene32305	MS.gene072885	PPI
MS.gene63095	MS.gene072885	PPI
MS.gene072885	MS.gene36943	PPI
MS.gene63104	MS.gene072885	PPI
MS.gene06476	MS.gene072885	PPI
MS.gene055880	MS.gene072885	PPI
MS.gene043123	MS.gene072885	PPI
MS.gene49011	MS.gene072885	PPI
MS.gene63218	MS.gene072885	PPI
MS.gene072885	MS.gene54958	PPI
MS.gene93027	MS.gene072885	PPI
MS.gene49017	MS.gene072885	PPI
MS.gene32641	MS.gene072885	PPI
MS.gene34215	MS.gene072885	PPI
MS.gene072885	MS.gene98324	PPI
MS.gene022905	MS.gene072885	PPI
MS.gene072885	MS.gene34737	PPI
MS.gene36810	MS.gene072885	PPI
MS.gene072885	MS.gene36065	PPI
MS.gene072885	MS.gene47772	PPI
MS.gene39744	MS.gene072885	PPI
MS.gene033696	MS.gene072885	PPI
MS.gene48656	MS.gene072885	PPI
MS.gene072885	MS.gene017193	PPI
MS.gene63223	MS.gene072885	PPI
MS.gene39754	MS.gene072885	PPI
MS.gene072885	MS.gene49015	PPI
MS.gene072885	MS.gene69407	PPI
MS.gene72959	MS.gene072885	PPI
MS.gene34731	MS.gene072885	PPI
MS.gene062282	MS.gene072885	PPI
MS.gene072885	MS.gene022920	PPI
MS.gene072885	MS.gene046838	PPI
MS.gene97355	MS.gene072885	PPI
MS.gene072885	MS.gene47781	PPI
MS.gene065516	MS.gene072885	PPI
MS.gene072885	MS.gene34733	PPI
MS.gene48654	MS.gene072885	PPI
MS.gene067702	MS.gene072885	PPI
MS.gene63212	MS.gene072885	PPI
MS.gene64984	MS.gene072885	PPI
MS.gene25412	MS.gene072885	PPI
MS.gene39745	MS.gene072885	PPI
MS.gene072885	MS.gene043122	PPI
MS.gene055754	MS.gene072885	PPI
MS.gene25410	MS.gene072885	PPI
MS.gene63185	MS.gene072885	PPI
MS.gene038427	MS.gene072885	PPI
MS.gene30045	MS.gene072885	PPI
MS.gene072885	MS.gene98323	PPI
MS.gene072885	MS.gene92095	PPI
MS.gene36752	MS.gene072885	PPI
MS.gene39747	MS.gene072885	PPI
MS.gene072885	MS.gene022912	PPI
MS.gene32300	MS.gene072885	PPI
MS.gene072885	MS.gene007875	PPI
MS.gene002108	MS.gene072885	PPI
MS.gene63210	MS.gene072885	PPI
MS.gene72960	MS.gene072885	PPI
MS.gene47783	MS.gene072885	PPI
MS.gene059405	MS.gene072885	PPI
MS.gene30067	MS.gene072885	PPI
MS.gene010866	MS.gene072885	PPI
MS.gene25411	MS.gene072885	PPI
MS.gene014842	MS.gene072885	PPI
MS.gene25414	MS.gene072885	PPI
MS.gene34739	MS.gene072885	PPI
MS.gene022915	MS.gene072885	PPI
MS.gene072885	MS.gene34736	PPI
MS.gene36764	MS.gene072885	PPI
MS.gene36942	MS.gene072885	PPI
MS.gene072885	MS.gene34730	PPI
MS.gene072885	MS.gene065374	PPI
MS.gene014840	MS.gene072885	PPI
MS.gene065234	MS.gene072885	PPI
MS.gene072885	MS.gene25418	PPI
MS.gene47780	MS.gene072885	PPI
MS.gene34753	MS.gene072885	PPI
MS.gene61631	MS.gene072885	PPI
MS.gene065374	MS.gene072885	PPI
MS.gene060770	MS.gene072885	PPI
MS.gene39752	MS.gene072885	PPI
MS.gene022909	MS.gene072885	PPI
MS.gene36763	MS.gene072885	PPI
MS.gene36804	MS.gene072885	PPI
MS.gene47782	MS.gene072885	PPI
MS.gene63224	MS.gene072885	PPI
MS.gene024263	MS.gene072885	PPI
MS.gene99983	MS.gene072885	PPI
MS.gene47775	MS.gene072885	PPI
MS.gene49513	MS.gene072885	PPI
MS.gene69850	MS.gene072885	PPI
MS.gene72957	MS.gene072885	PPI
MS.gene032379	MS.gene072885	PPI
MS.gene060769	MS.gene072885	PPI
MS.gene63214	MS.gene072885	PPI
MS.gene25296	MS.gene072885	PPI
MS.gene072885	MS.gene39747	PPI
MS.gene072885	MS.gene022919	PPI
MS.gene63217	MS.gene072885	PPI
MS.gene072885	MS.gene72956	PPI
MS.gene050239	MS.gene072885	PPI
MS.gene032296	MS.gene072885	PPI
MS.gene072885	MS.gene49012	PPI
MS.gene26058	MS.gene072885	PPI
MS.gene072885	MS.gene47771	PPI
MS.gene47777	MS.gene072885	PPI
MS.gene072885	MS.gene72961	PPI
MS.gene32643	MS.gene072885	PPI
MS.gene36067	MS.gene072885	PPI
MS.gene072885	MS.gene072231	PPI
MS.gene072885	MS.gene39753	PPI
MS.gene86337	MS.gene072885	PPI
MS.gene046839	MS.gene072885	PPI
MS.gene49013	MS.gene072885	PPI
MS.gene32638	MS.gene072885	PPI
MS.gene72952	MS.gene072885	PPI
MS.gene060771	MS.gene072885	PPI
MS.gene89076	MS.gene072885	PPI
MS.gene49015	MS.gene072885	PPI
MS.gene72955	MS.gene072885	PPI
MS.gene072885	MS.gene022917	PPI
MS.gene47781	MS.gene072885	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072885.t1	MTR_3g107160	98.106	264	5	0	1	264	126	389	0.0	533
MS.gene072885.t1	MTR_3g107120	60.938	256	100	0	8	263	141	396	1.05e-102	305
MS.gene072885.t1	MTR_3g107100	54.478	268	105	3	8	258	131	398	1.16e-82	253
MS.gene072885.t1	MTR_3g106960	67.526	194	59	3	66	255	2	195	5.06e-82	246
MS.gene072885.t1	MTR_1g053025	42.857	273	135	8	1	257	121	388	1.54e-53	178
MS.gene072885.t1	MTR_2g007450	43.015	272	130	7	8	257	151	419	3.81e-52	175
MS.gene072885.t1	MTR_1g107385	44.030	268	130	11	4	257	161	422	5.95e-52	175
MS.gene072885.t1	MTR_2g007400	40.824	267	138	9	8	259	143	404	7.44e-50	169
MS.gene072885.t1	MTR_2g008320	39.615	260	142	6	10	259	174	428	4.96e-47	162
MS.gene072885.t1	MTR_7g083740	42.798	243	122	6	31	262	135	371	1.13e-46	160
MS.gene072885.t1	MTR_7g075820	41.313	259	137	7	8	257	141	393	1.45e-46	160
MS.gene072885.t1	MTR_2g008310	40.154	259	140	7	10	259	120	372	4.26e-46	159
MS.gene072885.t1	MTR_3g099830	40.152	264	137	8	8	257	117	373	1.29e-45	157
MS.gene072885.t1	MTR_4g098590	43.033	244	127	6	8	242	126	366	5.10e-45	155
MS.gene072885.t1	MTR_2g007360	37.993	279	136	11	8	259	107	375	1.61e-42	149
MS.gene072885.t1	MTR_7g007080	39.921	253	143	6	10	257	130	378	6.12e-42	148
MS.gene072885.t1	MTR_5g083890	41.393	244	123	8	8	236	141	379	1.38e-41	149
MS.gene072885.t1	MTR_2g005990	40.909	264	140	9	6	257	135	394	1.74e-41	147
MS.gene072885.t1	MTR_2g007500	41.096	219	111	5	8	211	120	335	2.80e-38	137
MS.gene072885.t1	MTR_7g056280	40.777	206	115	3	59	257	367	572	2.05e-37	139
MS.gene072885.t1	MTR_7g007340	40.239	251	126	10	12	250	111	349	3.02e-37	135
MS.gene072885.t1	MTR_6g029350	43.062	209	98	9	58	257	1	197	3.87e-37	131
MS.gene072885.t1	MTR_3g026920	36.567	268	128	10	8	258	163	405	9.65e-37	134
MS.gene072885.t1	MTR_3g094980	60.000	110	38	2	143	248	27	134	7.53e-35	123
MS.gene072885.t1	MTR_2g007550	40.000	200	99	6	74	258	142	335	2.55e-34	127
MS.gene072885.t1	MTR_1g041245	32.963	270	163	7	2	258	122	386	3.35e-33	124
MS.gene072885.t1	MTR_6g045333	33.208	265	149	8	12	255	186	443	2.38e-31	120
MS.gene072885.t1	MTR_5g008950	33.077	260	159	6	8	258	112	365	4.60e-31	119
MS.gene072885.t1	MTR_7g075800	34.109	258	132	9	8	230	140	394	6.66e-31	121
MS.gene072885.t1	MTR_3g071850	34.221	263	141	9	12	251	149	402	7.24e-31	121
MS.gene072885.t1	MTR_3g108150	34.483	261	153	6	10	256	129	385	1.15e-30	117
MS.gene072885.t1	MTR_7g098570	34.800	250	150	6	8	250	136	379	2.84e-30	118
MS.gene072885.t1	MTR_7g098510	32.576	264	159	7	8	258	134	391	1.09e-29	115
MS.gene072885.t1	MTR_7g032370	31.343	268	153	10	4	258	103	352	3.62e-29	113
MS.gene072885.t1	MTR_6g022500	33.206	262	154	9	10	258	223	476	3.94e-29	115
MS.gene072885.t1	MTR_1g108800	35.361	263	139	8	12	257	93	341	8.28e-29	112
MS.gene072885.t1	MTR_7g098480	32.143	252	152	7	8	250	134	375	9.89e-29	114
MS.gene072885.t1	MTR_5g058100	31.698	265	158	8	11	260	130	386	3.57e-28	111
MS.gene072885.t1	MTR_5g007410	34.177	237	132	7	12	232	148	376	1.10e-27	110
MS.gene072885.t1	MTR_7g034090	41.954	174	91	4	97	263	147	317	1.87e-27	109
MS.gene072885.t1	MTR_2g007090	35.000	260	130	11	4	255	63	291	1.89e-27	107
MS.gene072885.t1	MTR_4g039440	34.749	259	142	11	1	245	143	388	3.47e-27	108
MS.gene072885.t1	MTR_3g036250	31.907	257	150	5	8	255	123	363	3.55e-27	108
MS.gene072885.t1	MTR_7g032380	32.197	264	132	10	7	258	128	356	4.24e-27	107
MS.gene072885.t1	MTR_7g115270	31.985	272	158	7	8	260	135	398	1.00e-26	107
MS.gene072885.t1	MTR_7g034120	30.980	255	158	8	12	258	64	308	1.02e-26	105
MS.gene072885.t1	MTR_1089s0010	34.211	266	144	10	12	260	130	381	1.07e-26	107
MS.gene072885.t1	MTR_5g058000	32.941	255	149	8	12	255	129	372	1.27e-26	107
MS.gene072885.t1	MTR_6g040270	32.308	260	149	10	12	255	130	378	1.34e-26	107
MS.gene072885.t1	MTR_5g073420	32.157	255	151	8	12	263	137	372	2.61e-26	106
MS.gene072885.t1	MTR_7g033990	35.498	231	125	11	31	250	158	375	3.08e-26	106
MS.gene072885.t1	MTR_1g066830	31.321	265	151	9	12	255	130	384	2.18e-25	103
MS.gene072885.t1	MTR_5g008920	31.008	258	163	7	10	258	130	381	3.02e-25	103
MS.gene072885.t1	MTR_7g034115	33.206	262	152	10	7	254	127	379	7.20e-25	102
MS.gene072885.t1	MTR_7g056020	34.082	267	143	9	3	250	114	366	9.57e-25	103
MS.gene072885.t1	MTR_5g045170	30.037	273	159	9	12	263	136	397	2.13e-24	100
MS.gene072885.t1	MTR_7g026500	31.535	241	132	10	34	256	168	393	3.28e-24	100
MS.gene072885.t1	MTR_2g007610	42.143	140	75	3	121	257	14	150	9.15e-24	94.7
MS.gene072885.t1	MTR_2g036470	32.609	276	150	11	5	255	129	393	1.39e-23	99.0
MS.gene072885.t1	MTR_1g108820	33.871	248	124	12	7	234	128	355	4.92e-23	97.1
MS.gene072885.t1	MTR_3g107140	62.338	77	29	0	8	84	121	197	5.22e-23	93.6
MS.gene072885.t1	MTR_0543s0010	33.209	268	143	10	8	256	198	448	1.11e-22	96.7
MS.gene072885.t1	MTR_6g022360	32.759	232	143	7	13	236	154	380	1.37e-22	96.3
MS.gene072885.t1	MTR_7g007370	37.826	230	128	8	8	229	93	315	2.14e-22	94.7
MS.gene072885.t1	MTR_3g109982	30.078	256	155	6	10	253	221	464	2.66e-22	96.3
MS.gene072885.t1	MTR_7g056433	29.104	268	160	9	10	258	133	389	9.58e-22	93.6
MS.gene072885.t1	MTR_5g039470	31.489	235	131	9	12	227	104	327	1.83e-21	92.0
MS.gene072885.t1	MTR_5g045510	30.916	262	139	9	12	255	132	369	2.19e-21	92.4
MS.gene072885.t1	MTR_7g088260	31.518	257	150	10	10	250	209	455	2.43e-21	93.2
MS.gene072885.t1	MTR_3g105060	27.626	257	161	7	10	258	134	373	3.78e-21	91.7
MS.gene072885.t1	MTR_1g085120	32.328	232	140	7	10	231	214	438	9.02e-21	91.3
MS.gene072885.t1	MTR_5g039450	29.583	240	138	7	34	256	131	356	9.11e-21	90.5
MS.gene072885.t1	MTR_0492s0020	33.333	249	136	9	8	243	198	429	9.97e-21	91.3
MS.gene072885.t1	MTR_1g085120	32.328	232	140	7	10	231	289	513	1.67e-20	90.9
MS.gene072885.t1	MTR_6g011460	31.298	262	160	6	12	260	169	423	1.82e-20	90.1
MS.gene072885.t1	MTR_5g012840	30.962	239	114	8	12	244	109	302	8.04e-20	87.4
MS.gene072885.t1	MTR_7g055943	29.084	251	155	6	27	260	179	423	1.44e-19	87.8
MS.gene072885.t1	MTR_5g054920	30.052	193	110	6	55	235	2	181	1.45e-19	84.3
MS.gene072885.t1	MTR_3g082890	28.800	250	152	6	7	233	210	456	1.54e-19	87.8
MS.gene072885.t1	MTR_0009s0080	31.197	234	140	7	12	231	141	367	1.97e-19	87.4
MS.gene072885.t1	MTR_3g040700	31.278	227	126	7	8	224	161	367	2.36e-19	87.0
MS.gene072885.t1	MTR_5g073370	28.996	269	157	10	7	260	133	382	5.22e-19	85.9
MS.gene072885.t1	MTR_6g022520	30.303	231	133	8	49	260	94	315	6.23e-19	84.7
MS.gene072885.t1	MTR_7g033915	31.651	218	117	9	54	255	161	362	7.14e-19	85.1
MS.gene072885.t1	MTR_5g013500	30.738	244	147	8	35	258	124	365	7.28e-19	85.1
MS.gene072885.t1	MTR_3g108560	35.160	219	124	7	35	243	158	368	4.03e-18	83.2
MS.gene072885.t1	MTR_3g450920	52.475	101	37	3	2	100	126	217	1.04e-17	80.1
MS.gene072885.t1	MTR_5g031970	29.911	224	128	6	12	231	125	323	1.11e-17	81.6
MS.gene072885.t1	MTR_5g073340	31.658	199	124	3	9	200	107	300	2.86e-17	80.1
MS.gene072885.t1	MTR_3g087260	31.538	260	159	7	10	256	202	455	3.63e-17	80.9
MS.gene072885.t1	MTR_5g024060	37.500	136	73	4	121	250	71	200	4.19e-17	79.0
MS.gene072885.t1	MTR_3g023630	29.956	227	144	6	10	231	129	345	4.28e-17	80.1
MS.gene072885.t1	MTR_3g071790	29.189	185	111	6	54	225	25	202	9.19e-17	77.0
MS.gene072885.t1	MTR_5g063950	29.278	263	161	9	12	257	107	361	1.57e-16	78.6
MS.gene072885.t1	MTR_4g080610	31.304	230	141	6	35	253	124	347	6.00e-16	77.0
MS.gene072885.t1	MTR_7g081290	34.921	126	68	3	129	244	120	241	6.49e-16	75.5
MS.gene072885.t1	MTR_6g044572	29.317	249	141	6	28	264	169	394	1.38e-15	76.3
MS.gene072885.t1	MTR_7g021990	30.196	255	158	9	10	248	165	415	1.43e-15	76.3
MS.gene072885.t1	MTR_7g021950	30.196	255	158	9	10	248	165	415	2.04e-15	75.9
MS.gene072885.t1	MTR_7g056430	30.224	268	127	10	9	250	124	357	2.32e-15	76.3
MS.gene072885.t1	MTR_7g056420	30.224	268	127	10	9	250	124	357	2.69e-15	75.9
MS.gene072885.t1	MTR_6g044560	29.317	249	141	6	28	264	345	570	2.74e-15	75.5
MS.gene072885.t1	MTR_3g095630	32.237	152	87	6	85	231	11	151	4.15e-15	72.0
MS.gene072885.t1	MTR_2g020180	30.345	145	75	4	126	258	85	215	6.08e-15	72.0
MS.gene072885.t1	MTR_1377s0010	35.433	127	75	3	108	232	7	128	8.17e-15	70.1
MS.gene072885.t1	MTR_7g056277	28.077	260	161	8	8	255	380	625	1.19e-14	73.9
MS.gene072885.t1	MTR_3g467400	28.340	247	131	11	12	245	137	350	1.44e-14	72.8
MS.gene072885.t1	MTR_7g114710	27.376	263	131	9	17	258	141	364	1.63e-14	72.8
MS.gene072885.t1	MTR_2g007530	34.337	166	80	5	102	258	192	337	1.71e-14	72.4
MS.gene072885.t1	MTR_3g115430	35.043	117	70	3	145	258	12	125	2.37e-14	68.6
MS.gene072885.t1	MTR_1g053050	48.718	78	39	1	181	257	37	114	3.64e-14	67.8
MS.gene072885.t1	MTR_7g060470	28.745	247	138	11	10	231	126	359	9.45e-14	70.9
MS.gene072885.t1	MTR_1g043170	39.286	84	42	3	181	258	8	88	1.80e-13	65.1
MS.gene072885.t1	MTR_5g084070	28.520	277	140	8	10	234	127	397	2.76e-13	69.3
MS.gene072885.t1	MTR_7g056287	27.907	258	164	7	8	255	124	369	2.94e-13	69.3
MS.gene072885.t1	MTR_8g085430	37.324	142	70	8	106	234	164	299	3.48e-13	68.6
MS.gene072885.t1	MTR_5g076150	30.332	211	109	8	13	195	26	226	1.05e-12	66.2
MS.gene072885.t1	MTR_7g022105	30.400	250	156	9	10	244	166	412	7.53e-12	65.1
MS.gene072885.t1	MTR_7g023310	32.432	111	72	2	132	242	331	438	2.25e-11	63.9
MS.gene072885.t1	MTR_5g039490	27.027	259	144	8	12	255	145	373	5.51e-11	62.4
MS.gene072885.t1	MTR_7g034110	33.077	130	71	4	109	231	190	310	8.40e-11	62.0
MS.gene072885.t1	MTR_3g108140	40.000	85	45	1	181	259	65	149	8.62e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072885.t1	AT4G26340	27.832	309	167	7	3	258	114	419	9.75e-20	88.2
MS.gene072885.t1	AT3G26920	31.365	271	157	10	7	256	37	299	1.27e-19	86.7
MS.gene072885.t1	AT3G26920	29.276	304	159	13	7	256	37	338	1.95e-16	78.2
MS.gene072885.t1	AT3G26920	29.276	304	159	13	7	256	37	338	1.95e-16	78.2
MS.gene072885.t1	AT5G56452	34.783	115	69	1	150	258	112	226	7.98e-15	72.0
MS.gene072885.t1	AT5G56452	34.783	115	69	1	150	258	113	227	8.52e-15	72.0
MS.gene072885.t1	AT1G32375	25.000	308	178	8	3	258	116	422	8.75e-15	73.9
MS.gene072885.t1	AT1G32375	25.000	308	178	8	3	258	116	422	8.75e-15	73.9
MS.gene072885.t1	AT5G56380	27.358	318	157	11	9	258	128	439	2.72e-14	72.4
MS.gene072885.t1	AT5G56380	27.358	318	157	11	9	258	128	439	2.72e-14	72.4
MS.gene072885.t1	AT5G56440	25.392	319	163	12	6	259	117	425	2.44e-13	69.7
MS.gene072885.t1	AT4G10420	28.477	302	165	9	2	255	21	319	2.64e-13	68.9
MS.gene072885.t1	AT3G54910	28.477	302	169	10	2	258	74	373	3.77e-13	68.9
MS.gene072885.t1	AT3G54910	28.477	302	169	10	2	258	74	373	3.77e-13	68.9
MS.gene072885.t1	AT3G54910	28.477	302	169	10	2	258	74	373	3.77e-13	68.9
MS.gene072885.t1	AT3G50710	27.124	306	167	12	8	258	123	427	9.42e-12	65.1
MS.gene072885.t1	AT5G22610	25.253	297	169	10	9	255	140	433	3.86e-11	63.2

Find 46 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAATAAAAGCTCACTTTCT+TGG	0.176566	3.2:-87306570	None:intergenic
TAGAAGGAATCGAAGAAAAT+TGG	0.191161	3.2:+87306476	MS.gene072885:CDS
AGACAATGAGGAACAGATAT+TGG	0.286231	3.2:-87306505	None:intergenic
CGATCACAACTTCACATATA+GGG	0.312073	3.2:-87306696	None:intergenic
TTGCAAGTGAGGATGCTAAT+AGG	0.327137	3.2:-87305786	None:intergenic
TAAGCTTTGTAGCTCTTGAT+AGG	0.357478	3.2:-87306006	None:intergenic
TCGATCACAACTTCACATAT+AGG	0.369694	3.2:-87306697	None:intergenic
TTTGTTCATAGAAATAAATA+AGG	0.381043	3.2:+87306109	MS.gene072885:CDS
TCAAAATATTGAACTCAGTC+AGG	0.393649	3.2:+87306353	MS.gene072885:CDS
TCCTTCTATTATCTCATTGT+GGG	0.399087	3.2:-87306461	None:intergenic
AGAAGGAATCGAAGAAAATT+GGG	0.408150	3.2:+87306477	MS.gene072885:CDS
AGTTAGTTTCTTCAAAATGA+AGG	0.434643	3.2:-87305884	None:intergenic
GACAATGAGGAACAGATATT+GGG	0.437543	3.2:-87306504	None:intergenic
TTCCTTCTATTATCTCATTG+TGG	0.439702	3.2:-87306462	None:intergenic
TGCAAGTGAGGATGCTAATA+GGG	0.443953	3.2:-87305785	None:intergenic
GCACGTAAATTCTCAAGATT+CGG	0.444469	3.2:-87305948	None:intergenic
AAACTCGAACTGGCATTTGT+TGG	0.455332	3.2:+87306302	MS.gene072885:CDS
TTCAAAATGAAGGATCTTGA+GGG	0.457781	3.2:-87305874	None:intergenic
CTTGAGGGAGGGGAGTGTAA+TGG	0.463433	3.2:-87305859	None:intergenic
TTTACTCTATAAACTCGAAC+TGG	0.468317	3.2:+87306292	MS.gene072885:CDS
CTTCAAAATGAAGGATCTTG+AGG	0.470897	3.2:-87305875	None:intergenic
GTTGTCAAATTGTGAAAGGT+AGG	0.479754	3.2:-87306261	None:intergenic
ACCCACAATGAGATAATAGA+AGG	0.480526	3.2:+87306460	MS.gene072885:CDS
GATTTAATATTACTTCTAGC+AGG	0.499995	3.2:+87305921	MS.gene072885:CDS
TTTCTATAAGTTCGTTGTGA+AGG	0.501551	3.2:+87305827	MS.gene072885:CDS
AATGAAGGATCTTGAGGGAG+GGG	0.517549	3.2:-87305869	None:intergenic
GAGAGTTATTATTATGCGCA+AGG	0.530407	3.2:+87306668	MS.gene072885:CDS
ACATTATGAAGTGCTTTCAG+TGG	0.554780	3.2:-87306080	None:intergenic
GAACAAGGGTCTTGCAAGTG+AGG	0.558852	3.2:-87305797	None:intergenic
GTTGTGATCGATTGCAAGCG+AGG	0.567231	3.2:+87306709	MS.gene072885:CDS
GAAGTGCTTTCAGTGGAAAG+TGG	0.575993	3.2:-87306073	None:intergenic
AAATGAAGGATCTTGAGGGA+GGG	0.584441	3.2:-87305870	None:intergenic
TTATTTGTTTAGGTGTATCG+AGG	0.588335	3.2:+87306225	MS.gene072885:intron
ATGCTAATAGGGAATTTGAA+AGG	0.596817	3.2:-87305774	None:intergenic
GATCACAACTTCACATATAG+GGG	0.597898	3.2:-87306695	None:intergenic
AGAGTTATTATTATGCGCAA+GGG	0.608669	3.2:+87306669	MS.gene072885:CDS
AGTTTATAGAGTAAAGTGCA+AGG	0.613124	3.2:-87306284	None:intergenic
GTTTATAGAGTAAAGTGCAA+GGG	0.614792	3.2:-87306283	None:intergenic
AAAATGAAGGATCTTGAGGG+AGG	0.631237	3.2:-87305871	None:intergenic
TATAGAAATCTAGATGAACA+AGG	0.632393	3.2:-87305812	None:intergenic
AAGGGTTGTCAAATTGTGAA+AGG	0.643954	3.2:-87306265	None:intergenic
CAAACCATGAAAATCAATTG+CGG	0.646623	3.2:+87306625	MS.gene072885:CDS
AGGAATCGAAGAAAATTGGG+AGG	0.653281	3.2:+87306480	MS.gene072885:CDS
ATAGAAATCTAGATGAACAA+GGG	0.662564	3.2:-87305811	None:intergenic
CACAACTTCACATATAGGGG+AGG	0.667240	3.2:-87306692	None:intergenic
AGGTAAGAGAGTCTTCAGAG+TGG	0.706824	3.2:-87305986	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGTTCATAGAAATAAATA+AGG	+	chr3.2:87306109-87306128	MS.gene072885:CDS	15.0%
!	AAGATATACCGTGAAAAATA+AGG	-	chr3.2:87306195-87306214	None:intergenic	25.0%
!	ACCTAAACAAATAAACAACA+GGG	-	chr3.2:87306219-87306238	None:intergenic	25.0%
!	ATAGAAATCTAGATGAACAA+GGG	-	chr3.2:87305814-87305833	None:intergenic	25.0%
!	GATTTAATATTACTTCTAGC+AGG	+	chr3.2:87305921-87305940	MS.gene072885:CDS	25.0%
!	TATAGAAATCTAGATGAACA+AGG	-	chr3.2:87305815-87305834	None:intergenic	25.0%
!!	AGTTAGTTTCTTCAAAATGA+AGG	-	chr3.2:87305887-87305906	None:intergenic	25.0%
!!!	AATTTTGGCCTTATTTTTCA+CGG	+	chr3.2:87306184-87306203	MS.gene072885:intron	25.0%
!!!	AGTTCAATATTTTGAAGGTT+AGG	-	chr3.2:87306348-87306367	None:intergenic	25.0%
!!!	AGTTTTAATGAAAGACAATG+AGG	-	chr3.2:87306520-87306539	None:intergenic	25.0%
!!!	ATAAATCAAAAAGGCATTCT+AGG	-	chr3.2:87306416-87306435	None:intergenic	25.0%
!!!	GTTCAATATTTTGAAGGTTA+GGG	-	chr3.2:87306347-87306366	None:intergenic	25.0%
!!!	TGCTCAATTTTGAAATTCTT+GGG	+	chr3.2:87306547-87306566	MS.gene072885:CDS	25.0%
!!!	TTGATTTGCAGTTTTGTTTT+GGG	+	chr3.2:87306161-87306180	MS.gene072885:intron	25.0%
!!!	TTGCTCAATTTTGAAATTCT+TGG	+	chr3.2:87306546-87306565	MS.gene072885:CDS	25.0%
	AGAAGGAATCGAAGAAAATT+GGG	+	chr3.2:87306477-87306496	MS.gene072885:CDS	30.0%
	AGAGTTATTATTATGCGCAA+GGG	+	chr3.2:87306669-87306688	MS.gene072885:CDS	30.0%
	AGTTTATAGAGTAAAGTGCA+AGG	-	chr3.2:87306287-87306306	None:intergenic	30.0%
	ATGCTAATAGGGAATTTGAA+AGG	-	chr3.2:87305777-87305796	None:intergenic	30.0%
	CAAACCATGAAAATCAATTG+CGG	+	chr3.2:87306625-87306644	MS.gene072885:CDS	30.0%
	CACCTAAACAAATAAACAAC+AGG	-	chr3.2:87306220-87306239	None:intergenic	30.0%
	GTTTATAGAGTAAAGTGCAA+GGG	-	chr3.2:87306286-87306305	None:intergenic	30.0%
	TAGAAGGAATCGAAGAAAAT+TGG	+	chr3.2:87306476-87306495	MS.gene072885:CDS	30.0%
	TCAAAATATTGAACTCAGTC+AGG	+	chr3.2:87306353-87306372	MS.gene072885:CDS	30.0%
	TCCTTCTATTATCTCATTGT+GGG	-	chr3.2:87306464-87306483	None:intergenic	30.0%
	TTATTTGTTTAGGTGTATCG+AGG	+	chr3.2:87306225-87306244	MS.gene072885:intron	30.0%
	TTCAAAATGAAGGATCTTGA+GGG	-	chr3.2:87305877-87305896	None:intergenic	30.0%
	TTCCTTCTATTATCTCATTG+TGG	-	chr3.2:87306465-87306484	None:intergenic	30.0%
	TTTACTCTATAAACTCGAAC+TGG	+	chr3.2:87306292-87306311	MS.gene072885:CDS	30.0%
	TTTCTATAAGTTCGTTGTGA+AGG	+	chr3.2:87305827-87305846	MS.gene072885:CDS	30.0%
!	TCCCTGTTGTTTATTTGTTT+AGG	+	chr3.2:87306215-87306234	MS.gene072885:intron	30.0%
!!	GACTGAGTTCAATATTTTGA+AGG	-	chr3.2:87306353-87306372	None:intergenic	30.0%
!!	TTTACCGCAATTGATTTTCA+TGG	-	chr3.2:87306632-87306651	None:intergenic	30.0%
!!!	CAGTTTTGTTTTGGGAATTT+TGG	+	chr3.2:87306169-87306188	MS.gene072885:intron	30.0%
!!!	CTTGATTTGCAGTTTTGTTT+TGG	+	chr3.2:87306160-87306179	MS.gene072885:intron	30.0%
	AAGGGTTGTCAAATTGTGAA+AGG	-	chr3.2:87306268-87306287	None:intergenic	35.0%
	ACCCACAATGAGATAATAGA+AGG	+	chr3.2:87306460-87306479	MS.gene072885:CDS	35.0%
	AGACAATGAGGAACAGATAT+TGG	-	chr3.2:87306508-87306527	None:intergenic	35.0%
	AGTTGACGAAAGCAAAAATG+TGG	+	chr3.2:87306039-87306058	MS.gene072885:CDS	35.0%
	CCAATAAAAGCTCACTTTCT+TGG	-	chr3.2:87306573-87306592	None:intergenic	35.0%
	CGATCACAACTTCACATATA+GGG	-	chr3.2:87306699-87306718	None:intergenic	35.0%
	CTTCAAAATGAAGGATCTTG+AGG	-	chr3.2:87305878-87305897	None:intergenic	35.0%
	GACAATGAGGAACAGATATT+GGG	-	chr3.2:87306507-87306526	None:intergenic	35.0%
	GAGAGTTATTATTATGCGCA+AGG	+	chr3.2:87306668-87306687	MS.gene072885:CDS	35.0%
	GATCACAACTTCACATATAG+GGG	-	chr3.2:87306698-87306717	None:intergenic	35.0%
	GCACGTAAATTCTCAAGATT+CGG	-	chr3.2:87305951-87305970	None:intergenic	35.0%
	GTTGACGAAAGCAAAAATGT+GGG	+	chr3.2:87306040-87306059	MS.gene072885:CDS	35.0%
	GTTGTCAAATTGTGAAAGGT+AGG	-	chr3.2:87306264-87306283	None:intergenic	35.0%
	TCGATCACAACTTCACATAT+AGG	-	chr3.2:87306700-87306719	None:intergenic	35.0%
	TTGACGAAAGCAAAAATGTG+GGG	+	chr3.2:87306041-87306060	MS.gene072885:CDS	35.0%
!	ACATTATGAAGTGCTTTCAG+TGG	-	chr3.2:87306083-87306102	None:intergenic	35.0%
!	AGTCAGGTTTGTTTGGTATA+GGG	+	chr3.2:87306369-87306388	MS.gene072885:intron	35.0%
!	CCAAGAAAGTGAGCTTTTAT+TGG	+	chr3.2:87306570-87306589	MS.gene072885:CDS	35.0%
!	TAAGCTTTGTAGCTCTTGAT+AGG	-	chr3.2:87306009-87306028	None:intergenic	35.0%
	AAAATGAAGGATCTTGAGGG+AGG	-	chr3.2:87305874-87305893	None:intergenic	40.0%
	AAACTCGAACTGGCATTTGT+TGG	+	chr3.2:87306302-87306321	MS.gene072885:CDS	40.0%
	AAATGAAGGATCTTGAGGGA+GGG	-	chr3.2:87305873-87305892	None:intergenic	40.0%
	AGGAATCGAAGAAAATTGGG+AGG	+	chr3.2:87306480-87306499	MS.gene072885:CDS	40.0%
	TGCAAGTGAGGATGCTAATA+GGG	-	chr3.2:87305788-87305807	None:intergenic	40.0%
	TTGCAAGTGAGGATGCTAAT+AGG	-	chr3.2:87305789-87305808	None:intergenic	40.0%
!	CAGTCAGGTTTGTTTGGTAT+AGG	+	chr3.2:87306368-87306387	MS.gene072885:intron	40.0%
!	TGAACTCAGTCAGGTTTGTT+TGG	+	chr3.2:87306362-87306381	MS.gene072885:intron	40.0%
	AATGAAGGATCTTGAGGGAG+GGG	-	chr3.2:87305872-87305891	None:intergenic	45.0%
	AGGTAAGAGAGTCTTCAGAG+TGG	-	chr3.2:87305989-87306008	None:intergenic	45.0%
	CACAACTTCACATATAGGGG+AGG	-	chr3.2:87306695-87306714	None:intergenic	45.0%
!	GAAGTGCTTTCAGTGGAAAG+TGG	-	chr3.2:87306076-87306095	None:intergenic	45.0%
!!	AAAAATTAAATAAATCAAAA+AGG	-	chr3.2:87306425-87306444	None:intergenic	5.0%
!!!	TTAATTTTTCTATATTATTA+GGG	+	chr3.2:87306436-87306455	MS.gene072885:intron	5.0%
!!!	TTTAATTTTTCTATATTATT+AGG	+	chr3.2:87306435-87306454	MS.gene072885:intron	5.0%
	GAACAAGGGTCTTGCAAGTG+AGG	-	chr3.2:87305800-87305819	None:intergenic	50.0%
	GTTGTGATCGATTGCAAGCG+AGG	+	chr3.2:87306709-87306728	MS.gene072885:CDS	50.0%
!	CTTGAGGGAGGGGAGTGTAA+TGG	-	chr3.2:87305862-87305881	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	87305759	87306741	87305759	ID=MS.gene072885
chr3.2	mRNA	87305759	87306741	87305759	ID=MS.gene072885.t1;Parent=MS.gene072885
chr3.2	exon	87305759	87306130	87305759	ID=MS.gene072885.t1.exon1;Parent=MS.gene072885.t1
chr3.2	CDS	87305759	87306130	87305759	ID=cds.MS.gene072885.t1;Parent=MS.gene072885.t1
chr3.2	exon	87306237	87306374	87306237	ID=MS.gene072885.t1.exon2;Parent=MS.gene072885.t1
chr3.2	CDS	87306237	87306374	87306237	ID=cds.MS.gene072885.t1;Parent=MS.gene072885.t1
chr3.2	exon	87306457	87306741	87306457	ID=MS.gene072885.t1.exon3;Parent=MS.gene072885.t1
chr3.2	CDS	87306457	87306741	87306457	ID=cds.MS.gene072885.t1;Parent=MS.gene072885.t1

Gene Sequence

>MS.gene072885

ATGCACGATGATCATCCTTTCAAATTCCCTATTAGCATCCTCACTTGCAAGACCCTTGTTCATCTAGATTTCTATAAGTTCGTTGTGAAGGATTTTTCTTCCATTACACTCCCCTCCCTCAAGATCCTTCATTTTGAAGAAACTAACTTCTTAAATTATCAAGATTTAATATTACTTCTAGCAGGATGTCCGAATCTTGAGAATTTACGTGCAACTTTTCTAGAGTTCCACTCTGAAGACTCTCTTACCTATCAAGAGCTACAAAGCTTAAGCTTAAACAAGTTGACGAAAGCAAAAATGTGGGGCACTTATTGCCACTTTCCACTGAAAGCACTTCATAATGTGAAGCTTTTGTTCATAGAAATAAATAAGGTTTGAATTTTATTATGAACATGATGCTACTTGATTTGCAGTTTTGTTTTGGGAATTTTGGCCTTATTTTTCACGGTATATCTTTCCCTGTTGTTTATTTGTTTAGGTGTATCGAGGTTGTGATGAGATTCCTACCTTTCACAATTTGACAACCCTTGCACTTTACTCTATAAACTCGAACTGGCATTTGTTGGCGCAAGTGCTCAATCACTGCCCTAACCTTCAAAATATTGAACTCAGTCAGGTTTGTTTGGTATAGGGATCATATCTGATTTATCATTTCCTAGAATGCCTTTTTGATTTATTTAATTTTTCTATATTATTAGGGAACCCACAATGAGATAATAGAAGGAATCGAAGAAAATTGGGAGGACCCAATATCTGTTCCTCATTGTCTTTCATTAAAACTTCAAACTTGCTCAATTTTGAAATTCTTGGGCCAAGAAAGTGAGCTTTTATTGGCAAAATATATTCTAAAGAATGCAAGAGTTTTGCAAACCATGAAAATCAATTGCGGTAAAGAGCTCAAAACACATAGAGAGTTATTATTATGCGCAAGGGCCTCCCCTATATGTGAAGTTGTGATCGATTGCAAGCGAGGTTCTATGTAA

Protein sequence

>MS.gene072885.t1

MHDDHPFKFPISILTCKTLVHLDFYKFVVKDFSSITLPSLKILHFEETNFLNYQDLILLLAGCPNLENLRATFLEFHSEDSLTYQELQSLSLNKLTKAKMWGTYCHFPLKALHNVKLLFIEINKVYRGCDEIPTFHNLTTLALYSINSNWHLLAQVLNHCPNLQNIELSQGTHNEIIEGIEENWEDPISVPHCLSLKLQTCSILKFLGQESELLLAKYILKNARVLQTMKINCGKELKTHRELLLCARASPICEVVIDCKRGSM