AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63210.t1 MTR_8g468840 86.253 451 60 2 2 451 1 450 0.0 759
MS.gene63210.t1 MTR_5g092960 64.653 447 145 6 15 451 19 462 0.0 520
MS.gene63210.t1 MTR_8g062270 62.528 443 154 6 15 450 16 453 0.0 520
MS.gene63210.t1 MTR_8g467800 57.079 445 174 6 13 450 18 452 2.87e-159 458
MS.gene63210.t1 MTR_4g032730 52.854 473 195 7 1 451 1 467 6.98e-153 442
MS.gene63210.t1 MTR_8g468760 56.114 458 152 11 2 450 1 418 6.36e-152 438
MS.gene63210.t1 MTR_8g468810 51.220 451 194 11 14 450 24 462 1.55e-141 413
MS.gene63210.t1 MTR_2g083840 52.477 444 195 8 15 450 21 456 2.47e-136 400
MS.gene63210.t1 MTR_5g092960 64.045 356 116 5 15 360 19 372 1.69e-133 390
MS.gene63210.t1 MTR_8g058970 47.010 485 208 14 5 450 2 476 1.25e-123 368
MS.gene63210.t1 MTR_8g468810 51.831 355 157 7 14 360 24 372 4.72e-110 330
MS.gene63210.t1 MTR_8g014260 41.866 461 245 12 2 450 1 450 1.39e-98 303
MS.gene63210.t1 MTR_8g445780 44.743 409 201 11 2 405 1 389 7.04e-95 291
MS.gene63210.t1 MTR_8g467800 57.143 301 116 4 13 309 18 309 4.98e-94 288
MS.gene63210.t1 MTR_8g468810 53.287 289 129 4 14 301 24 307 1.51e-93 285
MS.gene63210.t1 MTR_8g468810 53.287 289 129 4 14 301 24 307 1.86e-93 286
MS.gene63210.t1 MTR_8g468810 53.287 289 129 4 14 301 24 307 5.16e-93 285
MS.gene63210.t1 MTR_8g469020 39.207 454 248 10 15 450 7 450 5.28e-86 271
MS.gene63210.t1 MTR_8g058965 40.659 455 239 12 15 450 13 455 3.16e-83 264
MS.gene63210.t1 MTR_8g062080 38.496 452 232 15 15 450 23 444 1.73e-74 241
MS.gene63210.t1 MTR_8g062010 37.500 448 251 11 10 450 4 429 1.62e-73 238
MS.gene63210.t1 MTR_8g070950 37.838 444 245 12 14 450 14 433 5.40e-72 234
MS.gene63210.t1 MTR_8g062310 37.273 440 235 12 15 450 25 427 1.58e-71 232
MS.gene63210.t1 MTR_4g050250 39.100 422 227 11 2 397 1 418 6.10e-70 228
MS.gene63210.t1 MTR_8g077460 34.382 445 205 15 14 450 9 374 1.31e-64 213
MS.gene63210.t1 MTR_8g062300 34.100 478 246 16 15 450 26 476 1.51e-60 205
MS.gene63210.t1 MTR_8g014210 49.569 232 108 5 221 450 6 230 7.24e-60 196
MS.gene63210.t1 MTR_4g024710 42.466 292 156 8 163 450 63 346 3.47e-57 192
MS.gene63210.t1 MTR_8g014160 42.244 303 164 7 14 309 40 338 2.17e-50 177
MS.gene63210.t1 MTR_4g024745 43.985 266 138 7 158 420 12 269 1.88e-49 170
MS.gene63210.t1 MTR_8g467790 32.737 391 206 13 15 395 148 491 5.09e-45 164
MS.gene63210.t1 MTR_8g014290 46.405 153 73 5 14 158 9 160 2.86e-35 129
MS.gene63210.t1 MTR_5g021550 48.299 147 71 4 14 157 18 162 3.51e-34 125
MS.gene63210.t1 MTR_5g084070 31.390 446 263 18 10 443 5 419 3.67e-32 127
MS.gene63210.t1 MTR_5g080710 31.081 444 269 15 12 444 30 447 1.09e-28 118
MS.gene63210.t1 MTR_2g086020 29.808 416 183 14 41 450 2 314 2.92e-27 111
MS.gene63210.t1 MTR_2g008320 27.130 446 240 15 15 448 52 424 8.91e-27 112
MS.gene63210.t1 MTR_4g056020 29.330 433 249 18 15 420 9 411 1.73e-23 102
MS.gene63210.t1 MTR_3g087260 28.454 485 275 18 8 450 2 456 4.12e-23 101
MS.gene63210.t1 MTR_5g008950 25.901 444 239 13 17 450 1 364 6.26e-23 100
MS.gene63210.t1 MTR_4g056030 28.406 433 253 18 15 420 9 411 1.21e-22 100
MS.gene63210.t1 MTR_7g075820 25.439 456 256 17 14 451 5 394 1.50e-22 99.4
MS.gene63210.t1 MTR_2g008310 25.455 440 249 13 15 448 2 368 1.56e-22 99.4
MS.gene63210.t1 MTR_3g108560 25.503 447 246 14 14 450 19 388 1.65e-22 99.4
MS.gene63210.t1 MTR_3g036250 26.185 443 234 13 15 448 5 363 2.63e-22 98.2
MS.gene63210.t1 MTR_4g024720 38.202 178 81 6 5 157 3 176 3.46e-22 94.7
MS.gene63210.t1 MTR_1089s0010 26.164 451 240 17 15 451 8 379 1.26e-21 96.7
MS.gene63210.t1 MTR_6g022500 26.398 447 246 16 13 448 99 473 4.26e-21 95.9
MS.gene63210.t1 MTR_0543s0010 26.477 457 244 15 5 450 74 449 1.45e-20 94.0
MS.gene63210.t1 MTR_1g108820 27.803 446 242 19 15 449 8 384 1.71e-20 93.2
MS.gene63210.t1 MTR_4g056040 26.872 454 263 19 15 420 9 441 2.06e-20 94.0
MS.gene63210.t1 MTR_4g113810 37.647 170 98 5 99 263 2 168 2.47e-20 88.2
MS.gene63210.t1 MTR_3g108150 25.223 448 251 14 14 450 12 386 2.52e-20 92.8
MS.gene63210.t1 MTR_3g071850 26.126 444 261 19 8 443 17 401 4.88e-20 93.6
MS.gene63210.t1 MTR_2g072720 26.186 485 264 20 14 450 38 476 1.03e-19 91.7
MS.gene63210.t1 MTR_4g098590 27.317 410 230 13 20 420 4 354 1.07e-19 90.9
MS.gene63210.t1 MTR_3g107100 24.944 449 260 15 14 448 10 395 1.50e-19 90.9
MS.gene63210.t1 MTR_5g039950 25.223 448 262 13 13 442 21 413 2.28e-19 90.1
MS.gene63210.t1 MTR_4g039440 25.821 457 247 16 11 450 30 411 2.82e-19 90.1
MS.gene63210.t1 MTR_3g107120 25.778 450 262 18 8 448 2 388 4.01e-19 89.4
MS.gene63210.t1 MTR_6g045333 25.551 454 265 16 8 450 54 445 5.02e-19 89.4
MS.gene63210.t1 MTR_5g058100 25.556 450 246 17 15 450 9 383 5.04e-19 89.0
MS.gene63210.t1 MTR_6g011460 24.890 454 250 14 13 451 44 421 6.99e-19 89.0
MS.gene63210.t1 MTR_1g038710 26.824 425 276 13 15 420 19 427 7.78e-19 89.0
MS.gene63210.t1 MTR_4g080787 26.316 437 273 16 12 420 16 431 1.38e-18 88.6
MS.gene63210.t1 MTR_0492s0020 26.230 427 225 14 5 422 74 419 1.80e-18 87.8
MS.gene63210.t1 MTR_5g073420 24.000 450 249 20 15 451 11 380 1.84e-18 87.4
MS.gene63210.t1 MTR_3g107160 24.062 453 245 15 14 448 9 380 2.18e-18 87.0
MS.gene63210.t1 MTR_7g026500 26.444 450 248 19 15 450 14 394 7.43e-18 85.5
MS.gene63210.t1 MTR_1g085120 24.385 447 263 14 13 450 90 470 1.47e-17 85.1
MS.gene63210.t1 MTR_7g055943 25.219 456 248 19 15 451 40 421 1.60e-17 84.7
MS.gene63210.t1 MTR_4g055990 25.000 484 297 16 15 448 9 476 2.03e-17 84.7
MS.gene63210.t1 MTR_4g055990 25.219 456 280 14 15 420 9 453 2.40e-17 84.7
MS.gene63210.t1 MTR_1g085120 24.834 451 258 16 13 451 165 546 2.46e-17 84.7
MS.gene63210.t1 MTR_3g040700 24.764 424 217 13 3 412 31 366 2.55e-17 84.3
MS.gene63210.t1 MTR_2g082880 26.267 434 268 15 14 428 9 409 7.54e-17 82.8
MS.gene63210.t1 MTR_6g040270 26.770 452 228 20 17 448 10 378 9.59e-17 82.0
MS.gene63210.t1 MTR_6g022360 26.386 451 235 17 13 450 41 407 1.34e-16 82.0
MS.gene63210.t1 MTR_4g055580 26.201 458 267 19 15 420 100 538 4.11e-16 81.3
MS.gene63210.t1 MTR_2g007450 31.429 210 124 6 15 210 16 219 4.63e-16 80.5
MS.gene63210.t1 MTR_2g007450 32.593 135 83 4 315 448 290 417 8.80e-12 67.0
MS.gene63210.t1 MTR_7g032380 31.472 197 117 6 15 208 11 192 6.60e-16 79.3
MS.gene63210.t1 MTR_7g056277 23.725 451 259 15 9 450 253 627 7.09e-16 80.5
MS.gene63210.t1 MTR_2g007500 31.429 210 121 4 2 210 1 188 9.89e-16 78.6
MS.gene63210.t1 MTR_7g056287 23.476 443 262 12 13 450 1 371 1.75e-15 78.2
MS.gene63210.t1 MTR_7g056433 31.000 200 128 4 14 213 11 200 1.91e-15 78.2
MS.gene63210.t1 MTR_3g109982 28.298 470 249 18 9 422 7 444 2.58e-15 79.0
MS.gene63210.t1 MTR_8g014230 57.895 57 23 1 365 421 19 74 4.44e-15 71.2
MS.gene63210.t1 MTR_5g083890 25.176 425 245 14 14 420 5 374 6.10e-15 77.4
MS.gene63210.t1 MTR_0009s0080 25.635 433 249 13 17 441 20 387 9.06e-15 76.3
MS.gene63210.t1 MTR_7g056420 27.119 413 207 16 14 420 8 332 1.16e-14 77.0
MS.gene63210.t1 MTR_7g056430 27.119 413 207 16 14 420 8 332 1.33e-14 77.0
MS.gene63210.t1 MTR_3g048290 26.682 431 270 17 15 420 23 432 3.04e-14 75.1
MS.gene63210.t1 MTR_5g073370 24.757 412 219 15 15 412 5 339 3.08e-14 74.3
MS.gene63210.t1 MTR_7g115270 27.317 205 131 5 14 211 11 204 9.69e-14 73.2
MS.gene63210.t1 MTR_2g100570 29.954 217 136 8 1 209 56 264 1.49e-13 72.8
MS.gene63210.t1 MTR_8g085430 31.553 206 112 8 15 208 11 199 1.54e-13 72.0
MS.gene63210.t1 MTR_2g100570 29.536 237 151 8 2 230 57 285 1.90e-13 72.8
MS.gene63210.t1 MTR_1g041245 30.964 197 118 6 15 208 11 192 1.95e-13 72.0
MS.gene63210.t1 MTR_2g100570 29.954 217 136 8 1 209 56 264 2.80e-13 72.4
MS.gene63210.t1 MTR_7g034115 25.176 425 233 14 6 420 2 351 2.91e-13 71.6
MS.gene63210.t1 MTR_5g045510 23.516 438 251 12 15 448 12 369 4.31e-13 70.9
MS.gene63210.t1 MTR_2g005990 29.756 205 128 6 15 210 6 203 4.32e-13 70.9
MS.gene63210.t1 MTR_7g056447 29.268 205 121 7 14 213 8 193 2.24e-12 67.8
MS.gene63210.t1 MTR_1g108820 34.536 194 109 8 15 207 8 184 5.25e-12 67.4
MS.gene63210.t1 MTR_7g023310 23.583 441 265 15 14 420 25 427 7.18e-12 67.4
MS.gene63210.t1 MTR_4g024770 46.875 64 31 1 2 62 8 71 1.06e-11 60.8
MS.gene63210.t1 MTR_5g008920 27.511 229 140 6 17 239 14 222 1.48e-11 66.2
MS.gene63210.t1 MTR_7g032370 30.978 184 110 6 27 208 2 170 1.69e-11 65.9
MS.gene63210.t1 MTR_3g467400 28.095 210 126 6 13 208 1 199 2.04e-11 65.9
MS.gene63210.t1 MTR_2g007400 29.469 207 129 6 15 211 12 211 2.36e-11 65.9
MS.gene63210.t1 MTR_3g099830 30.457 197 112 5 15 210 12 184 2.91e-11 65.1
MS.gene63210.t1 MTR_2g007610 32.836 134 84 2 315 448 21 148 2.95e-11 62.4
MS.gene63210.t1 MTR_2g007090 25.108 231 139 7 237 451 82 294 3.68e-11 64.3
MS.gene63210.t1 MTR_1g108800 25.874 286 157 14 199 448 73 339 4.30e-11 64.7
MS.gene63210.t1 MTR_4g092430 30.556 180 111 5 14 192 42 208 4.71e-11 65.1
MS.gene63210.t1 MTR_4g092430 30.556 180 111 5 14 192 42 208 5.21e-11 64.7
MS.gene63210.t1 MTR_6g044560 29.817 218 123 7 15 209 178 388 5.45e-11 65.1
MS.gene63210.t1 MTR_1g115245 32.768 177 107 7 14 188 25 191 5.69e-11 63.9
MS.gene63210.t1 MTR_6g044572 29.817 218 123 7 15 209 2 212 7.39e-11 64.3
MS.gene63210.t1 MTR_7g034110 37.719 114 54 4 15 122 11 113 9.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63210.t1 AT4G26340 27.981 411 262 15 15 418 2 385 2.96e-31 124
MS.gene63210.t1 AT5G56420 27.594 453 276 19 14 450 5 421 9.80e-27 112
MS.gene63210.t1 AT5G56420 27.594 453 276 19 14 450 5 421 9.80e-27 112
MS.gene63210.t1 AT5G56420 27.594 453 276 19 14 450 5 421 9.80e-27 112
MS.gene63210.t1 AT5G60610 27.561 410 262 13 15 417 2 383 2.47e-26 110
MS.gene63210.t1 AT5G60610 27.561 410 262 13 15 417 2 383 2.47e-26 110
MS.gene63210.t1 AT4G10400 26.531 441 285 14 15 450 2 408 1.52e-25 108
MS.gene63210.t1 AT4G10400 26.531 441 285 14 15 450 2 408 1.52e-25 108
MS.gene63210.t1 AT4G10400 26.531 441 285 14 15 450 2 408 1.52e-25 108
MS.gene63210.t1 AT1G78750 27.155 464 288 18 12 448 15 455 1.78e-25 108
MS.gene63210.t1 AT1G78750 27.155 464 288 18 12 448 15 455 1.78e-25 108
MS.gene63210.t1 AT1G69630 27.146 431 256 14 15 418 18 417 2.38e-25 108
MS.gene63210.t1 AT5G56440 27.778 468 266 19 15 450 2 429 5.50e-25 107
MS.gene63210.t1 AT1G06630 28.977 352 227 10 14 354 11 350 8.25e-25 105
MS.gene63210.t1 AT1G06630 28.977 352 227 10 14 354 11 350 8.25e-25 105
MS.gene63210.t1 AT5G53840 25.942 451 294 17 14 451 17 440 1.09e-24 106
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 12 350 1.15e-24 105
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 12 350 1.15e-24 105
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 12 350 1.15e-24 105
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 12 350 1.15e-24 105
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 21 359 1.48e-24 105
MS.gene63210.t1 AT1G06630 28.775 351 227 9 15 354 12 350 1.66e-24 106
MS.gene63210.t1 AT4G10420 28.024 339 219 10 118 450 2 321 2.22e-24 103
MS.gene63210.t1 AT5G22730 25.212 472 281 18 14 448 27 463 3.15e-24 105
MS.gene63210.t1 AT5G22730 25.212 472 281 18 14 448 27 463 3.15e-24 105
MS.gene63210.t1 AT4G00160 27.350 468 295 17 3 451 1 442 3.21e-24 105
MS.gene63210.t1 AT5G22610 26.316 475 292 19 10 449 13 464 3.98e-24 105
MS.gene63210.t1 AT1G06630 30.034 293 196 7 14 305 11 295 4.72e-24 102
MS.gene63210.t1 AT5G38590 27.635 427 247 18 15 421 2 386 1.51e-23 102
MS.gene63210.t1 AT5G22610 25.597 461 283 18 10 449 13 434 1.82e-23 103
MS.gene63210.t1 AT2G26860 28.095 420 257 17 15 417 2 393 2.49e-23 102
MS.gene63210.t1 AT2G26860 28.095 420 257 17 15 417 2 393 2.49e-23 102
MS.gene63210.t1 AT2G04230 28.087 413 271 13 14 418 12 406 3.34e-23 102
MS.gene63210.t1 AT5G44950 26.535 456 284 21 14 444 3 432 5.17e-23 101
MS.gene63210.t1 AT1G78760 25.161 465 287 17 10 448 11 440 8.97e-23 100
MS.gene63210.t1 AT4G00315 24.945 453 311 12 15 451 2 441 1.29e-22 100
MS.gene63210.t1 AT1G55660 24.283 453 318 12 13 451 51 492 1.71e-22 100
MS.gene63210.t1 AT5G56820 27.594 453 265 17 15 448 15 423 1.81e-22 99.8
MS.gene63210.t1 AT5G53635 25.877 456 284 17 17 450 2 425 1.99e-22 99.4
MS.gene63210.t1 AT3G44060 26.126 444 298 13 17 449 1 425 2.14e-22 99.4
MS.gene63210.t1 AT5G56370 27.212 452 280 14 15 450 2 420 2.17e-22 99.4
MS.gene63210.t1 AT5G56370 27.212 452 280 14 15 450 2 420 2.17e-22 99.4
MS.gene63210.t1 AT5G38570 25.277 451 245 13 15 450 2 375 5.48e-22 97.8
MS.gene63210.t1 AT5G41840 26.190 378 233 13 15 354 14 383 7.61e-22 98.6
MS.gene63210.t1 AT5G56810 27.155 464 261 17 15 448 15 431 1.19e-21 97.4
MS.gene63210.t1 AT3G59190 26.818 440 259 18 14 403 11 437 9.90e-21 95.1
MS.gene63210.t1 AT3G49020 28.708 418 256 15 14 420 21 407 1.87e-20 94.0
MS.gene63210.t1 AT3G59190 28.571 371 222 15 14 354 11 368 2.23e-20 93.2
MS.gene63210.t1 AT5G22700 27.045 440 269 14 15 430 6 417 2.66e-20 93.2
MS.gene63210.t1 AT5G22700 27.045 440 269 14 15 430 6 417 2.66e-20 93.2
MS.gene63210.t1 AT5G22700 27.045 440 269 14 15 430 6 417 2.66e-20 93.2
MS.gene63210.t1 AT5G22700 27.045 440 269 14 15 430 6 417 2.66e-20 93.2
MS.gene63210.t1 AT3G50710 25.386 453 289 16 15 448 2 424 3.25e-20 92.8
MS.gene63210.t1 AT3G44810 29.721 323 208 10 17 328 9 323 4.17e-20 92.8
MS.gene63210.t1 AT5G22700 26.915 457 277 16 15 442 43 471 4.60e-20 92.8
MS.gene63210.t1 AT3G52680 26.501 483 278 19 3 451 6 445 4.66e-20 92.8
MS.gene63210.t1 AT5G56400 25.870 460 279 15 15 450 33 454 4.76e-20 92.8
MS.gene63210.t1 AT1G22000 26.033 484 269 19 3 448 17 449 4.90e-20 92.8
MS.gene63210.t1 AT1G16930 24.895 478 297 16 1 448 1 446 5.84e-20 92.4
MS.gene63210.t1 AT1G16930 24.895 478 297 16 1 448 1 446 5.84e-20 92.4
MS.gene63210.t1 AT1G16930 24.895 478 297 16 1 448 1 446 5.84e-20 92.4
MS.gene63210.t1 AT1G66320 26.490 453 276 18 20 448 35 454 6.83e-20 92.4
MS.gene63210.t1 AT5G44980 25.055 455 299 16 14 450 3 433 7.00e-20 92.0
MS.gene63210.t1 AT5G44980 25.055 455 299 16 14 450 3 433 7.00e-20 92.0
MS.gene63210.t1 AT3G26930 29.258 458 270 22 14 451 20 443 1.04e-19 91.7
MS.gene63210.t1 AT3G42770 25.835 449 291 17 17 449 1 423 1.33e-19 91.7
MS.gene63210.t1 AT1G66300 24.454 458 289 17 15 448 29 453 1.55e-19 91.3
MS.gene63210.t1 AT5G56700 26.829 328 208 10 115 432 52 357 1.56e-19 90.1
MS.gene63210.t1 AT1G66310 25.277 451 290 14 15 448 19 439 2.23e-19 90.5
MS.gene63210.t1 AT1G05080 26.039 457 290 17 14 451 12 439 2.23e-19 90.5
MS.gene63210.t1 AT4G13965 28.640 419 241 18 15 416 10 387 5.65e-19 89.4
MS.gene63210.t1 AT2G26030 24.359 468 292 19 15 448 4 443 8.76e-19 89.0
MS.gene63210.t1 AT4G09920 28.333 300 187 10 15 307 2 280 9.28e-19 86.7
MS.gene63210.t1 AT4G09920 28.333 300 187 10 15 307 2 280 9.28e-19 86.7
MS.gene63210.t1 AT4G09920 28.333 300 187 10 15 307 2 280 9.28e-19 86.7
MS.gene63210.t1 AT5G56410 25.287 435 279 11 24 434 12 424 9.33e-19 89.0
MS.gene63210.t1 AT4G09920 28.523 298 185 10 15 305 2 278 9.73e-19 87.0
MS.gene63210.t1 AT4G09920 28.523 298 185 10 15 305 2 278 9.73e-19 87.0
MS.gene63210.t1 AT5G22670 26.030 461 284 17 14 448 10 439 1.06e-18 88.6
MS.gene63210.t1 AT1G13780 25.855 468 288 20 15 448 10 452 1.31e-18 88.2
MS.gene63210.t1 AT2G26030 24.359 468 287 20 15 448 4 438 1.40e-18 88.2
MS.gene63210.t1 AT2G26030 24.359 468 287 20 15 448 4 438 1.40e-18 88.2
MS.gene63210.t1 AT1G32375 24.945 453 290 16 15 450 2 421 2.58e-18 87.0
MS.gene63210.t1 AT1G32375 24.945 453 290 16 15 450 2 421 2.58e-18 87.0
MS.gene63210.t1 AT5G62970 23.605 466 290 14 24 451 12 449 2.65e-18 87.4
MS.gene63210.t1 AT3G49030 27.056 462 273 21 14 451 20 441 2.97e-18 87.0
MS.gene63210.t1 AT5G18770 25.268 467 293 15 12 449 21 460 4.91e-18 86.7
MS.gene63210.t1 AT5G44960 26.782 463 260 20 15 450 5 415 5.28e-18 86.3
MS.gene63210.t1 AT1G51370 24.605 443 294 17 14 446 18 430 6.84e-18 85.9
MS.gene63210.t1 AT3G58920 24.900 498 282 20 15 451 2 468 8.94e-18 85.9
MS.gene63210.t1 AT5G22660 26.471 442 257 18 7 416 5 410 1.28e-17 85.5
MS.gene63210.t1 AT5G22720 24.167 480 284 18 14 450 22 464 2.75e-17 84.3
MS.gene63210.t1 AT3G49480 25.740 439 256 18 14 420 11 411 6.51e-17 83.2
MS.gene63210.t1 AT3G59200 24.000 375 252 11 15 382 7 355 8.53e-17 82.0
MS.gene63210.t1 AT3G58980 24.364 472 291 16 15 451 2 442 8.61e-17 83.2
MS.gene63210.t1 AT4G13985 24.945 457 301 18 15 448 19 456 9.33e-17 82.8
MS.gene63210.t1 AT4G14096 26.810 373 225 12 15 381 8 338 9.75e-17 82.8
MS.gene63210.t1 AT4G14096 26.810 373 225 12 15 381 8 338 9.75e-17 82.8
MS.gene63210.t1 AT4G27050 25.636 472 292 16 15 450 4 452 1.46e-16 82.0
MS.gene63210.t1 AT4G27050 25.636 472 292 16 15 450 4 452 1.46e-16 82.0
MS.gene63210.t1 AT4G27050 25.636 472 292 16 15 450 4 452 1.46e-16 82.0
MS.gene63210.t1 AT4G27050 25.636 472 292 16 15 450 4 452 1.46e-16 82.0
MS.gene63210.t1 AT4G27050 25.636 472 292 16 15 450 4 452 1.46e-16 82.0
MS.gene63210.t1 AT3G49030 26.304 460 253 20 14 451 20 415 2.60e-16 81.3
MS.gene63210.t1 AT3G59200 25.341 367 236 12 15 354 7 362 2.74e-16 81.6
MS.gene63210.t1 AT5G22700 25.561 446 256 15 15 442 43 430 3.45e-16 80.9
MS.gene63210.t1 AT1G80470 23.516 455 302 16 10 448 10 434 6.32e-16 80.1
MS.gene63210.t1 AT3G60040 26.184 359 241 12 14 355 12 363 6.54e-16 80.5
MS.gene63210.t1 AT5G38390 28.469 418 241 18 15 400 2 393 7.90e-16 79.7
MS.gene63210.t1 AT4G26350 23.516 455 300 13 15 450 2 427 8.37e-16 79.7
MS.gene63210.t1 AT3G60040 26.257 358 240 12 14 354 231 581 1.01e-15 80.5
MS.gene63210.t1 AT3G60040 26.257 358 240 12 14 354 232 582 1.03e-15 80.1
MS.gene63210.t1 AT5G38590 27.393 303 179 11 15 305 2 275 1.22e-15 77.8
MS.gene63210.t1 AT1G48400 30.837 227 145 5 9 230 4 223 1.49e-15 79.3
MS.gene63210.t1 AT3G60040 26.257 358 240 12 14 354 229 579 1.50e-15 79.7
MS.gene63210.t1 AT3G60040 26.257 358 240 12 14 354 231 581 1.56e-15 79.3
MS.gene63210.t1 AT4G14103 27.978 361 226 14 14 354 7 353 1.75e-15 78.2
MS.gene63210.t1 AT4G14103 27.978 361 226 14 14 354 7 353 1.75e-15 78.2
MS.gene63210.t1 AT1G48400 30.837 227 145 5 9 230 4 223 2.29e-15 78.6
MS.gene63210.t1 AT5G56370 27.697 343 213 10 15 353 2 313 2.96e-15 77.0
MS.gene63210.t1 AT3G56780 22.967 492 289 20 17 448 9 470 3.50e-15 77.8
MS.gene63210.t1 AT4G14103 27.978 361 226 14 14 354 7 353 3.83e-15 77.8
MS.gene63210.t1 AT5G56560 26.000 450 284 18 14 450 4 417 8.48e-15 76.6
MS.gene63210.t1 AT1G55030 26.588 425 267 18 5 419 9 398 1.20e-14 76.3
MS.gene63210.t1 AT3G59230 25.223 448 274 18 6 410 3 432 1.21e-14 76.3
MS.gene63210.t1 AT5G18780 23.414 457 310 16 9 448 5 438 1.94e-14 75.5
MS.gene63210.t1 AT5G18780 23.414 457 310 16 9 448 5 438 1.94e-14 75.5
MS.gene63210.t1 AT3G26922 27.852 298 183 11 14 303 13 286 1.99e-14 74.3
MS.gene63210.t1 AT3G26922 27.852 298 183 11 14 303 13 286 1.99e-14 74.3
MS.gene63210.t1 AT1G13780 26.730 318 199 13 15 309 10 316 2.57e-14 74.3
MS.gene63210.t1 AT3G58900 26.107 429 267 16 15 410 2 413 2.88e-14 75.1
MS.gene63210.t1 AT5G27750 24.429 438 277 16 15 418 5 422 3.00e-14 75.1
MS.gene63210.t1 AT5G22730 25.135 370 226 15 14 354 27 374 3.38e-14 74.3
MS.gene63210.t1 AT1G55660 26.596 282 194 7 13 290 51 323 3.44e-14 74.3
MS.gene63210.t1 AT1G55030 26.429 420 264 18 10 419 4 388 4.83e-14 74.3
MS.gene63210.t1 AT5G44980 28.731 268 165 11 14 269 3 256 4.93e-14 73.2
MS.gene63210.t1 AT5G44980 28.731 268 165 11 14 269 3 256 4.93e-14 73.2
MS.gene63210.t1 AT5G56390 24.424 434 280 18 34 450 22 424 6.65e-14 73.9
MS.gene63210.t1 AT2G29930 24.686 478 289 18 14 450 11 458 8.11e-14 73.6
MS.gene63210.t1 AT2G29930 24.686 478 289 18 14 450 11 458 8.11e-14 73.6
MS.gene63210.t1 AT4G13960 25.000 408 235 15 15 401 2 359 9.33e-14 73.6
MS.gene63210.t1 AT4G13960 25.000 408 235 15 15 401 2 359 9.33e-14 73.6
MS.gene63210.t1 AT1G66290 23.871 465 280 19 15 448 29 450 1.69e-13 72.8
MS.gene63210.t1 AT3G58940 24.590 427 279 13 15 422 2 404 1.69e-13 73.2
MS.gene63210.t1 AT3G58940 24.590 427 279 13 15 422 2 404 1.69e-13 73.2
MS.gene63210.t1 AT3G51530 25.899 417 265 14 14 418 29 413 1.77e-13 72.4
MS.gene63210.t1 AT4G15060 26.303 403 226 18 15 390 26 384 2.05e-13 72.4
MS.gene63210.t1 AT1G56610 27.500 360 221 12 20 354 15 359 2.55e-13 72.0
MS.gene63210.t1 AT3G52680 29.119 261 154 10 3 250 6 248 3.28e-13 71.2
MS.gene63210.t1 AT5G35995 24.895 474 296 18 14 450 4 454 3.89e-13 71.6
MS.gene63210.t1 AT5G35995 24.895 474 296 18 14 450 4 454 3.89e-13 71.6
MS.gene63210.t1 AT1G56610 27.500 360 221 12 20 354 78 422 4.06e-13 71.6
MS.gene63210.t1 AT3G58860 24.079 407 277 15 15 407 7 395 4.85e-13 71.2
MS.gene63210.t1 AT1G58310 28.028 289 173 12 12 276 5 282 5.46e-13 71.2
MS.gene63210.t1 AT5G56800 27.018 285 180 11 177 451 78 344 6.12e-13 70.1
MS.gene63210.t1 AT3G59240 24.733 469 302 21 14 450 7 456 8.88e-13 70.5
MS.gene63210.t1 AT4G22280 27.507 349 223 13 15 354 2 329 1.38e-12 68.9
MS.gene63210.t1 AT4G22280 27.507 349 223 13 15 354 2 329 1.83e-12 69.3
MS.gene63210.t1 AT5G18770 25.278 360 231 9 12 351 21 362 1.99e-12 68.9
MS.gene63210.t1 AT1G52650 22.906 406 247 13 15 401 2 360 2.19e-12 69.3
MS.gene63210.t1 AT4G00320 25.330 379 224 16 15 354 13 371 2.45e-12 69.3
MS.gene63210.t1 AT5G56325 27.341 267 169 11 195 450 11 263 3.53e-12 67.0
MS.gene63210.t1 AT5G56690 24.292 424 273 20 17 420 4 399 4.17e-12 68.2
MS.gene63210.t1 AT4G15060 28.296 311 175 14 15 303 172 456 4.58e-12 68.6
MS.gene63210.t1 AT3G58930 22.300 426 280 12 15 400 2 416 4.95e-12 68.2
MS.gene63210.t1 AT3G58930 22.300 426 280 12 15 400 2 416 4.95e-12 68.2
MS.gene63210.t1 AT3G58930 22.300 426 280 12 15 400 2 416 4.95e-12 68.2
MS.gene63210.t1 AT1G51370 24.495 396 260 16 14 400 18 383 5.07e-12 67.8
MS.gene63210.t1 AT5G41630 26.733 202 137 4 14 209 11 207 7.09e-12 67.8
MS.gene63210.t1 AT2G42730 23.516 455 320 15 14 449 4 449 9.73e-12 67.0
MS.gene63210.t1 AT5G38396 25.472 424 256 17 15 399 2 404 1.03e-11 67.0
MS.gene63210.t1 AT5G18780 27.668 253 160 8 9 254 5 241 1.13e-11 66.6
MS.gene63210.t1 AT5G18780 27.668 253 160 8 9 254 5 241 1.13e-11 66.6
MS.gene63210.t1 AT3G58900 29.066 289 178 12 15 290 2 276 1.31e-11 65.9
MS.gene63210.t1 AT3G54910 24.121 398 254 11 68 450 8 372 1.50e-11 66.2
MS.gene63210.t1 AT3G54910 24.121 398 254 11 68 450 8 372 1.50e-11 66.2
MS.gene63210.t1 AT3G54910 24.121 398 254 11 68 450 8 372 1.50e-11 66.2
MS.gene63210.t1 AT3G58900 29.066 289 178 12 15 290 2 276 1.59e-11 65.9
MS.gene63210.t1 AT3G58900 29.066 289 178 12 15 290 2 276 1.59e-11 65.9
MS.gene63210.t1 AT3G44090 25.278 360 220 13 17 351 26 361 1.67e-11 66.2
MS.gene63210.t1 AT5G38392 30.622 209 119 10 15 210 2 197 2.29e-11 63.9
MS.gene63210.t1 AT3G58880 26.218 431 277 16 15 420 3 417 2.39e-11 65.9
MS.gene63210.t1 AT5G50270 25.298 419 274 18 15 420 2 394 3.82e-11 65.1
MS.gene63210.t1 AT5G56810 28.063 253 146 8 15 252 15 246 4.48e-11 64.3
MS.gene63210.t1 AT5G22660 27.660 329 185 13 8 309 6 308 4.56e-11 64.3
MS.gene63210.t1 AT5G41830 24.932 369 240 13 14 354 12 371 4.64e-11 65.1
MS.gene63210.t1 AT3G62440 21.429 476 310 14 15 449 2 454 4.80e-11 65.1
MS.gene63210.t1 AT3G59170 25.249 301 178 10 14 276 6 297 7.76e-11 64.3

Find 103 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCAACAGATTCACTTTC+AGG 0.185864 8.4:+41472749 None:intergenic
TGAAGTAAATAACGAAATTC+TGG 0.291092 8.4:+41472532 None:intergenic
GACCTTTGCTTCTGAACCTT+TGG 0.306970 8.4:-41472960 MS.gene63210:CDS
GCTGGTACGGACGCAGGTTT+TGG 0.314404 8.4:+41473918 None:intergenic
ATTAAATTTGCAGCATATCT+AGG 0.323413 8.4:-41472238 MS.gene63210:CDS
TGAACCTTTGGCCATACTTC+GGG 0.331951 8.4:-41472948 MS.gene63210:CDS
TCACTCTCCATTGTCTGGAT+TGG 0.340516 8.4:-41473624 MS.gene63210:CDS
TGCTCCAACCTTGTCTCCGT+TGG 0.360161 8.4:-41473568 MS.gene63210:CDS
GTCGCAGATGGCGCAACCTT+TGG 0.363184 8.4:-41473888 MS.gene63210:CDS
ATCAGCCATGCAGCAACTAT+TGG 0.363992 8.4:-41472818 MS.gene63210:CDS
TCATCTCACTCTCCATTGTC+TGG 0.365039 8.4:-41473629 MS.gene63210:CDS
CACTCTCCATTGTCTGGATT+GGG 0.372409 8.4:-41473623 MS.gene63210:CDS
GGAAGTTGGCACCCGAAGTA+TGG 0.375232 8.4:+41472937 None:intergenic
TTTCAATTACAAGACTCTTC+GGG 0.379284 8.4:-41473094 MS.gene63210:CDS
TTCAACCTCTTTAAGGAAGT+TGG 0.391442 8.4:+41472923 None:intergenic
GTTTCAATTACAAGACTCTT+CGG 0.396791 8.4:-41473095 MS.gene63210:CDS
GAGCAAGAGAGAAGAGGTTG+AGG 0.398894 8.4:+41473586 None:intergenic
TTTGATTCATCACCTGCATA+TGG 0.404288 8.4:-41472316 MS.gene63210:CDS
ATTATCGTTGACACTAAAGT+TGG 0.418001 8.4:-41472899 MS.gene63210:CDS
CTGAACCTTTGGCCATACTT+CGG 0.418794 8.4:-41472949 MS.gene63210:CDS
CAGCTCGAGATGTTTAATTC+CGG 0.420771 8.4:+41472700 None:intergenic
ATTCTGGAAAATCTGAAGTT+GGG 0.421868 8.4:+41472548 None:intergenic
CTGCCACGCTCTCGAAGATC+TGG 0.421884 8.4:-41472987 MS.gene63210:CDS
CAAATGTGATACGAGACAAT+TGG 0.423331 8.4:+41472267 None:intergenic
TTGAAGACAGTGCTTATTGA+TGG 0.425113 8.4:-41472163 MS.gene63210:CDS
TTATCGTTGACACTAAAGTT+GGG 0.428962 8.4:-41472898 MS.gene63210:CDS
AATTCTGGAAAATCTGAAGT+TGG 0.433100 8.4:+41472547 None:intergenic
TGATAAGATGTGATGCAGTA+TGG 0.438018 8.4:+41473951 None:intergenic
CAGATCTTCGAGAGCGTGGC+AGG 0.439573 8.4:+41472988 None:intergenic
TGAATGTACCTCAGTCTCTC+TGG 0.452843 8.4:-41473127 MS.gene63210:intron
GTTATCAGAGTTTGCAGGAT+AGG 0.455635 8.4:+41472448 None:intergenic
GCTCCAACCTTGTCTCCGTT+GGG 0.456205 8.4:-41473567 MS.gene63210:intron
CATCTCAATGAAATTGAAGT+TGG 0.458438 8.4:+41472068 None:intergenic
ATATGCTGCAAATTTAATAA+AGG 0.461660 8.4:+41472243 None:intergenic
AAATGTGATACGAGACAATT+GGG 0.471708 8.4:+41472268 None:intergenic
TCTAGGACATTTAAATGAGC+TGG 0.471859 8.4:-41472221 MS.gene63210:CDS
GATCAGGCGTGTCTATTTCA+AGG 0.473258 8.4:+41472870 None:intergenic
AGCAAGAGAGAAGAGGTTGA+GGG 0.498536 8.4:+41473587 None:intergenic
AGAGCAAAGAATGGATCGGA+TGG 0.498894 8.4:+41473703 None:intergenic
AGGCTAAGGTACTTGAGATC+AGG 0.500946 8.4:+41472854 None:intergenic
ATTCATCACCTGCATATGGA+TGG 0.505571 8.4:-41472312 MS.gene63210:CDS
GTTTAATTCCGGAGAGAGCT+CGG 0.505622 8.4:+41472711 None:intergenic
AATCTCCTCCGAGCTCTCTC+CGG 0.506677 8.4:-41472719 MS.gene63210:CDS
AAGAGAGAAGAAAGAGCTCT+AGG 0.509079 8.4:+41472509 None:intergenic
TGAATGTTATCAGAGTTTGC+AGG 0.511880 8.4:+41472443 None:intergenic
AGACAATTGGGAATACTTTG+AGG 0.512627 8.4:+41472280 None:intergenic
AAGAGGTTGAGGGATATTGA+AGG 0.513533 8.4:+41473597 None:intergenic
TCGATTGAGAGAGCAAAGAA+TGG 0.519431 8.4:+41473694 None:intergenic
GGGTGCCAACTTCCTTAAAG+AGG 0.520722 8.4:-41472928 MS.gene63210:CDS
TTGTAACATTGGTGAGGCTA+AGG 0.522260 8.4:+41472840 None:intergenic
TTCGTCTCCCATCCATATGC+AGG 0.525517 8.4:+41472304 None:intergenic
CCAGCTTCGTCTGTCGCAGA+TGG 0.529158 8.4:-41473900 MS.gene63210:CDS
ATTCTACATGATGAACGAAC+CGG 0.533683 8.4:-41472140 MS.gene63210:CDS
ATGTTGTGCTTTCTCTTCGT+AGG 0.535644 8.4:-41473768 MS.gene63210:CDS
GCAGAAAGAAAGATATTCAC+AGG 0.538214 8.4:+41473010 None:intergenic
TGGAAGAGTCAAGCTCCATT+CGG 0.541152 8.4:-41474011 MS.gene63210:CDS
ACAGATTCACTTTCAGGAGT+GGG 0.541743 8.4:+41472755 None:intergenic
GTCCTCTAGTCTCAGCCGAA+TGG 0.544816 8.4:+41473996 None:intergenic
AGCAAAGAATGGATCGGATG+GGG 0.545093 8.4:+41473705 None:intergenic
GAACGAACCGGAGGAGTGGA+AGG 0.548955 8.4:-41472128 MS.gene63210:CDS
TGCGACAGACGAAGCTGGTA+CGG 0.550003 8.4:+41473905 None:intergenic
TTCGGCTGAGACTAGAGGAC+AGG 0.554220 8.4:-41473993 MS.gene63210:CDS
TATCGTTGACACTAAAGTTG+GGG 0.556368 8.4:-41472897 MS.gene63210:CDS
AACAGATTCACTTTCAGGAG+TGG 0.562125 8.4:+41472754 None:intergenic
GGCCAAAGGTTCAGAAGCAA+AGG 0.565137 8.4:+41472958 None:intergenic
GAGCAAAGAATGGATCGGAT+GGG 0.574872 8.4:+41473704 None:intergenic
TTCTGGAAAATCTGAAGTTG+GGG 0.575072 8.4:+41472549 None:intergenic
TGCATGGCTGATTGTAACAT+TGG 0.576313 8.4:+41472829 None:intergenic
CCATCTGCGACAGACGAAGC+TGG 0.576803 8.4:+41473900 None:intergenic
TTTCCAGATCTTCGAGAGCG+TGG 0.581879 8.4:+41472984 None:intergenic
TTGCTCTCTCAATCGAGACA+TGG 0.583955 8.4:-41473687 MS.gene63210:CDS
TGGCACATCGCTGATCCCCT+TGG 0.584306 8.4:+41472088 None:intergenic
ATGTGATGCAGTATGGAGAT+TGG 0.586129 8.4:+41473958 None:intergenic
TTACCCAACGGAGACAAGGT+TGG 0.587600 8.4:+41473564 None:intergenic
CTCCATTCGGCTGAGACTAG+AGG 0.590817 8.4:-41473998 MS.gene63210:CDS
TTCATCACCTGCATATGGAT+GGG 0.591126 8.4:-41472311 MS.gene63210:CDS
GCTCGGAGGAGATTGAGTAA+AGG 0.595653 8.4:+41472728 None:intergenic
AGTTGTAGCACTTTCAATGA+CGG 0.603115 8.4:+41473061 None:intergenic
GCTGTTTAGTTCAACAACAA+AGG 0.604630 8.4:-41472681 MS.gene63210:intron
CGAAACGGCGACGATGATGG+TGG 0.607012 8.4:-41474031 None:intergenic
TGATGAACGAACCGGAGGAG+TGG 0.611046 8.4:-41472132 MS.gene63210:CDS
TGAGAGAGCAAAGAATGGAT+CGG 0.612618 8.4:+41473699 None:intergenic
ATTATTACCCAACGGAGACA+AGG 0.617294 8.4:+41473560 None:intergenic
GTAGCACTTTCAATGACGGT+AGG 0.626464 8.4:+41473065 None:intergenic
AGGCGACCCAATCCAGACAA+TGG 0.627316 8.4:+41473617 None:intergenic
GACGAAGCTGGTACGGACGC+AGG 0.630273 8.4:+41473912 None:intergenic
ACTACTAGACATGTATCTCG+TGG 0.630303 8.4:-41473041 MS.gene63210:CDS
ACATGGATCAGTACCATCGT+TGG 0.631181 8.4:-41473670 MS.gene63210:CDS
GGCACCCGAAGTATGGCCAA+AGG 0.649858 8.4:+41472944 None:intergenic
AGATGAAATTCCTCGAGGTG+AGG 0.654061 8.4:+41473646 None:intergenic
AGTTTCCAATAGTTGCTGCA+TGG 0.666899 8.4:+41472813 None:intergenic
AGGTTGGAGCAAGAGAGAAG+AGG 0.669440 8.4:+41473580 None:intergenic
GGCTGATTGTAACATTGGTG+AGG 0.682471 8.4:+41472834 None:intergenic
TATTGGAAACTTGCACAGCG+TGG 0.684954 8.4:-41472801 MS.gene63210:CDS
CTTCGTCGTAGATCATGCAG+TGG 0.691100 8.4:+41473830 None:intergenic
CTACATGATGAACGAACCGG+AGG 0.693872 8.4:-41472137 MS.gene63210:CDS
AAAATTTCTGATCTGCCAAG+GGG 0.695820 8.4:-41472103 MS.gene63210:CDS
GCAGGTGATGAATCAAACGA+TGG 0.696653 8.4:+41472322 None:intergenic
CATCGTTGGACCTCACCTCG+AGG 0.697844 8.4:-41473656 MS.gene63210:CDS
TCTGATAACATTCAATGACA+AGG 0.699133 8.4:-41472434 MS.gene63210:intron
CTCGAGGTGAGGTCCAACGA+TGG 0.702219 8.4:+41473657 None:intergenic
GAGTGAGATGAAATTCCTCG+AGG 0.744479 8.4:+41473641 None:intergenic
TAATTCCGGAGAGAGCTCGG+AGG 0.748060 8.4:+41472714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTAATTTTTGTTTATATTA+GGG - chr8.4:41472878-41472897 MS.gene63210:CDS 10.0%
!!! TTCTAATTTTTGTTTATATT+AGG - chr8.4:41472877-41472896 MS.gene63210:CDS 10.0%
!!! TTTTTTTTTTTAATGTGATT+TGG - chr8.4:41472935-41472954 MS.gene63210:CDS 10.0%
!!! AATTTTTCTTATAATAGTAG+TGG + chr8.4:41472584-41472603 None:intergenic 15.0%
!! ATATGCTGCAAATTTAATAA+AGG + chr8.4:41473850-41473869 None:intergenic 20.0%
!! CTTTAATTACACTGAATTAT+CGG + chr8.4:41472753-41472772 None:intergenic 20.0%
! ATTAAATTTGCAGCATATCT+AGG - chr8.4:41473852-41473871 MS.gene63210:CDS 25.0%
! TGAAGTAAATAACGAAATTC+TGG + chr8.4:41473561-41473580 None:intergenic 25.0%
! TGCTTAGTAAATACATTAGT+TGG + chr8.4:41472626-41472645 None:intergenic 25.0%
!! GATAATTTTCAACCTCTTTA+AGG + chr8.4:41473177-41473196 None:intergenic 25.0%
!!! GCTAGATATGTTTTTCAAAA+TGG - chr8.4:41473897-41473916 MS.gene63210:CDS 25.0%
AAAAAATTTCTGATCTGCCA+AGG - chr8.4:41473985-41474004 MS.gene63210:CDS 30.0%
AAAAATTTCTGATCTGCCAA+GGG - chr8.4:41473986-41474005 MS.gene63210:CDS 30.0%
AAATGTGATACGAGACAATT+GGG + chr8.4:41473825-41473844 None:intergenic 30.0%
ATTATCGTTGACACTAAAGT+TGG - chr8.4:41473191-41473210 MS.gene63210:intron 30.0%
GTTTCAATTACAAGACTCTT+CGG - chr8.4:41472995-41473014 MS.gene63210:CDS 30.0%
TCTGATAACATTCAATGACA+AGG - chr8.4:41473656-41473675 MS.gene63210:CDS 30.0%
TTATCGTTGACACTAAAGTT+GGG - chr8.4:41473192-41473211 MS.gene63210:intron 30.0%
TTCAGTGTAATTACATGTGT+CGG - chr8.4:41472722-41472741 MS.gene63210:CDS 30.0%
TTTCAATTACAAGACTCTTC+GGG - chr8.4:41472996-41473015 MS.gene63210:CDS 30.0%
! AATTCTGGAAAATCTGAAGT+TGG + chr8.4:41473546-41473565 None:intergenic 30.0%
! ATTCTGGAAAATCTGAAGTT+GGG + chr8.4:41473545-41473564 None:intergenic 30.0%
! TGTAATTAAAGTGTCAGTGT+CGG - chr8.4:41472762-41472781 MS.gene63210:CDS 30.0%
!!! ATGTTTTGAGATTCTTCCAA+AGG + chr8.4:41472221-41472240 None:intergenic 30.0%
AAAATTTCTGATCTGCCAAG+GGG - chr8.4:41473987-41474006 MS.gene63210:CDS 35.0%
AGACAATTGGGAATACTTTG+AGG + chr8.4:41473813-41473832 None:intergenic 35.0%
AGTTGTAGCACTTTCAATGA+CGG + chr8.4:41473032-41473051 None:intergenic 35.0%
ATAGAGAGAGAGAGAATGAA+AGG + chr8.4:41472557-41472576 None:intergenic 35.0%
ATTCTACATGATGAACGAAC+CGG - chr8.4:41473950-41473969 MS.gene63210:CDS 35.0%
CAAATGTGATACGAGACAAT+TGG + chr8.4:41473826-41473845 None:intergenic 35.0%
GCAGAAAGAAAGATATTCAC+AGG + chr8.4:41473083-41473102 None:intergenic 35.0%
TAGAGAGAGAGAGAATGAAA+GGG + chr8.4:41472556-41472575 None:intergenic 35.0%
TATCGTTGACACTAAAGTTG+GGG - chr8.4:41473193-41473212 MS.gene63210:intron 35.0%
TGAAAGGGATTATTACCCAA+CGG + chr8.4:41472541-41472560 None:intergenic 35.0%
TGAATGTTATCAGAGTTTGC+AGG + chr8.4:41473650-41473669 None:intergenic 35.0%
TGATAAGATGTGATGCAGTA+TGG + chr8.4:41472142-41472161 None:intergenic 35.0%
TTGAAGACAGTGCTTATTGA+TGG - chr8.4:41473927-41473946 MS.gene63210:CDS 35.0%
TTTGATTCATCACCTGCATA+TGG - chr8.4:41473774-41473793 MS.gene63210:CDS 35.0%
! GCTGTTTAGTTCAACAACAA+AGG - chr8.4:41473409-41473428 MS.gene63210:intron 35.0%
! TCTAGGACATTTAAATGAGC+TGG - chr8.4:41473869-41473888 MS.gene63210:CDS 35.0%
! TTCAACCTCTTTAAGGAAGT+TGG + chr8.4:41473170-41473189 None:intergenic 35.0%
! TTCTGGAAAATCTGAAGTTG+GGG + chr8.4:41473544-41473563 None:intergenic 35.0%
!! TCCTTAGATTAGGAGTATCT+CGG + chr8.4:41472807-41472826 None:intergenic 35.0%
AACAGATTCACTTTCAGGAG+TGG + chr8.4:41473339-41473358 None:intergenic 40.0%
AAGAGAGAAGAAAGAGCTCT+AGG + chr8.4:41473584-41473603 None:intergenic 40.0%
AAGAGGTTGAGGGATATTGA+AGG + chr8.4:41472496-41472515 None:intergenic 40.0%
AATCAAACGATGGATCCATC+TGG + chr8.4:41473761-41473780 None:intergenic 40.0%
ACAGATTCACTTTCAGGAGT+GGG + chr8.4:41473338-41473357 None:intergenic 40.0%
ACCAAGACACTCCTTAGATT+AGG + chr8.4:41472817-41472836 None:intergenic 40.0%
ACCGAGATACTCCTAATCTA+AGG - chr8.4:41472803-41472822 MS.gene63210:CDS 40.0%
ACTACTAGACATGTATCTCG+TGG - chr8.4:41473049-41473068 MS.gene63210:CDS 40.0%
AGATATAACCAGAGAGACTG+AGG + chr8.4:41472974-41472993 None:intergenic 40.0%
AGTTTCCAATAGTTGCTGCA+TGG + chr8.4:41473280-41473299 None:intergenic 40.0%
ATGTGATGCAGTATGGAGAT+TGG + chr8.4:41472135-41472154 None:intergenic 40.0%
ATGTTGTGCTTTCTCTTCGT+AGG - chr8.4:41472322-41472341 MS.gene63210:CDS 40.0%
ATTATTACCCAACGGAGACA+AGG + chr8.4:41472533-41472552 None:intergenic 40.0%
ATTCATCACCTGCATATGGA+TGG - chr8.4:41473778-41473797 MS.gene63210:CDS 40.0%
CAGCTCGAGATGTTTAATTC+CGG + chr8.4:41473393-41473412 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG + chr8.4:41473344-41473363 None:intergenic 40.0%
GTTATCAGAGTTTGCAGGAT+AGG + chr8.4:41473645-41473664 None:intergenic 40.0%
TCATTCTCTCTCTCTCTATC+AGG - chr8.4:41472558-41472577 MS.gene63210:CDS 40.0%
TCGATTGAGAGAGCAAAGAA+TGG + chr8.4:41472399-41472418 None:intergenic 40.0%
TGAGAGAGCAAAGAATGGAT+CGG + chr8.4:41472394-41472413 None:intergenic 40.0%
TGCATGGCTGATTGTAACAT+TGG + chr8.4:41473264-41473283 None:intergenic 40.0%
TTCATCACCTGCATATGGAT+GGG - chr8.4:41473779-41473798 MS.gene63210:CDS 40.0%
TTGTAACATTGGTGAGGCTA+AGG + chr8.4:41473253-41473272 None:intergenic 40.0%
!! TCCTAATCTAAGGAGTGTCT+TGG - chr8.4:41472813-41472832 MS.gene63210:CDS 40.0%
!!! ATTTTTTCCTTCCACTCCTC+CGG + chr8.4:41473972-41473991 None:intergenic 40.0%
ACATGGATCAGTACCATCGT+TGG - chr8.4:41472420-41472439 MS.gene63210:intron 45.0%
AGAGCAAAGAATGGATCGGA+TGG + chr8.4:41472390-41472409 None:intergenic 45.0%
AGATGAAATTCCTCGAGGTG+AGG + chr8.4:41472447-41472466 None:intergenic 45.0%
AGCAAAGAATGGATCGGATG+GGG + chr8.4:41472388-41472407 None:intergenic 45.0%
AGCAAGAGAGAAGAGGTTGA+GGG + chr8.4:41472506-41472525 None:intergenic 45.0%
ATCAGCCATGCAGCAACTAT+TGG - chr8.4:41473272-41473291 MS.gene63210:intron 45.0%
ATGGATCCATCTGGCAACAA+GGG + chr8.4:41473752-41473771 None:intergenic 45.0%
CACTCTCCATTGTCTGGATT+GGG - chr8.4:41472467-41472486 MS.gene63210:CDS 45.0%
CTGAACCTTTGGCCATACTT+CGG - chr8.4:41473141-41473160 MS.gene63210:intron 45.0%
GACCTTTGCTTCTGAACCTT+TGG - chr8.4:41473130-41473149 MS.gene63210:intron 45.0%
GAGCAAAGAATGGATCGGAT+GGG + chr8.4:41472389-41472408 None:intergenic 45.0%
GAGTGAGATGAAATTCCTCG+AGG + chr8.4:41472452-41472471 None:intergenic 45.0%
GATCAGGCGTGTCTATTTCA+AGG + chr8.4:41473223-41473242 None:intergenic 45.0%
GCAGGTGATGAATCAAACGA+TGG + chr8.4:41473771-41473790 None:intergenic 45.0%
GGCTGATTGTAACATTGGTG+AGG + chr8.4:41473259-41473278 None:intergenic 45.0%
GTAGCACTTTCAATGACGGT+AGG + chr8.4:41473028-41473047 None:intergenic 45.0%
GTTTAATTCCGGAGAGAGCT+CGG + chr8.4:41473382-41473401 None:intergenic 45.0%
TATTGGAAACTTGCACAGCG+TGG - chr8.4:41473289-41473308 MS.gene63210:intron 45.0%
TCACTCTCCATTGTCTGGAT+TGG - chr8.4:41472466-41472485 MS.gene63210:CDS 45.0%
TCATCTCACTCTCCATTGTC+TGG - chr8.4:41472461-41472480 MS.gene63210:CDS 45.0%
TGAACCTTTGGCCATACTTC+GGG - chr8.4:41473142-41473161 MS.gene63210:intron 45.0%
TGAATGTACCTCAGTCTCTC+TGG - chr8.4:41472963-41472982 MS.gene63210:CDS 45.0%
TGGAAGAGTCAAGCTCCATT+CGG - chr8.4:41472079-41472098 MS.gene63210:CDS 45.0%
TTGCTCTCTCAATCGAGACA+TGG - chr8.4:41472403-41472422 MS.gene63210:intron 45.0%
! AGGCTAAGGTACTTGAGATC+AGG + chr8.4:41473239-41473258 None:intergenic 45.0%
!! GATTAGGAGTATCTCGGTGT+CGG + chr8.4:41472801-41472820 None:intergenic 45.0%
AGGTTGGAGCAAGAGAGAAG+AGG + chr8.4:41472513-41472532 None:intergenic 50.0%
CTACATGATGAACGAACCGG+AGG - chr8.4:41473953-41473972 MS.gene63210:CDS 50.0%
CTGTTGTCGTGTACTTGCAG+TGG - chr8.4:41473508-41473527 MS.gene63210:intron 50.0%
CTTCGTCGTAGATCATGCAG+TGG + chr8.4:41472263-41472282 None:intergenic 50.0%
GAGCAAGAGAGAAGAGGTTG+AGG + chr8.4:41472507-41472526 None:intergenic 50.0%
GATGGATCCATCTGGCAACA+AGG + chr8.4:41473753-41473772 None:intergenic 50.0%
GCTCGGAGGAGATTGAGTAA+AGG + chr8.4:41473365-41473384 None:intergenic 50.0%
GGCCAAAGGTTCAGAAGCAA+AGG + chr8.4:41473135-41473154 None:intergenic 50.0%
GGGTGCCAACTTCCTTAAAG+AGG - chr8.4:41473162-41473181 MS.gene63210:intron 50.0%
TGGATCCATCTGGCAACAAG+GGG + chr8.4:41473751-41473770 None:intergenic 50.0%
TTACCCAACGGAGACAAGGT+TGG + chr8.4:41472529-41472548 None:intergenic 50.0%
TTCGTCTCCCATCCATATGC+AGG + chr8.4:41473789-41473808 None:intergenic 50.0%
TTTCCAGATCTTCGAGAGCG+TGG + chr8.4:41473109-41473128 None:intergenic 50.0%
AATCTCCTCCGAGCTCTCTC+CGG - chr8.4:41473371-41473390 MS.gene63210:intron 55.0%
AGGCGACCCAATCCAGACAA+TGG + chr8.4:41472476-41472495 None:intergenic 55.0%
AGTTGCCCCTTGTTGCCAGA+TGG - chr8.4:41473743-41473762 MS.gene63210:CDS 55.0%
CTCCATTCGGCTGAGACTAG+AGG - chr8.4:41472092-41472111 MS.gene63210:CDS 55.0%
GCTCCAACCTTGTCTCCGTT+GGG - chr8.4:41472523-41472542 MS.gene63210:CDS 55.0%
GGAAGTTGGCACCCGAAGTA+TGG + chr8.4:41473156-41473175 None:intergenic 55.0%
GTCCTCTAGTCTCAGCCGAA+TGG + chr8.4:41472097-41472116 None:intergenic 55.0%
TAATTCCGGAGAGAGCTCGG+AGG + chr8.4:41473379-41473398 None:intergenic 55.0%
TGATGAACGAACCGGAGGAG+TGG - chr8.4:41473958-41473977 MS.gene63210:CDS 55.0%
TGCGACAGACGAAGCTGGTA+CGG + chr8.4:41472188-41472207 None:intergenic 55.0%
TGCTCCAACCTTGTCTCCGT+TGG - chr8.4:41472522-41472541 MS.gene63210:CDS 55.0%
TTCGGCTGAGACTAGAGGAC+AGG - chr8.4:41472097-41472116 MS.gene63210:CDS 55.0%
!! GTACGGACGCAGGTTTTGGT+GGG + chr8.4:41472171-41472190 None:intergenic 55.0%
!! TACGGACGCAGGTTTTGGTG+GGG + chr8.4:41472170-41472189 None:intergenic 55.0%
CATCGTTGGACCTCACCTCG+AGG - chr8.4:41472434-41472453 MS.gene63210:intron 60.0%
CCAGCTTCGTCTGTCGCAGA+TGG - chr8.4:41472190-41472209 MS.gene63210:CDS 60.0%
CCATCTGCGACAGACGAAGC+TGG + chr8.4:41472193-41472212 None:intergenic 60.0%
CTCGAGGTGAGGTCCAACGA+TGG + chr8.4:41472436-41472455 None:intergenic 60.0%
CTGCCACGCTCTCGAAGATC+TGG - chr8.4:41473103-41473122 MS.gene63210:CDS 60.0%
GAACGAACCGGAGGAGTGGA+AGG - chr8.4:41473962-41473981 MS.gene63210:CDS 60.0%
GGCACCCGAAGTATGGCCAA+AGG + chr8.4:41473149-41473168 None:intergenic 60.0%
GTCGCAGATGGCGCAACCTT+TGG - chr8.4:41472202-41472221 MS.gene63210:CDS 60.0%
TGGCACATCGCTGATCCCCT+TGG + chr8.4:41474005-41474024 None:intergenic 60.0%
! CAGATCTTCGAGAGCGTGGC+AGG + chr8.4:41473105-41473124 None:intergenic 60.0%
! GCTGGTACGGACGCAGGTTT+TGG + chr8.4:41472175-41472194 None:intergenic 60.0%
!! GGTACGGACGCAGGTTTTGG+TGG + chr8.4:41472172-41472191 None:intergenic 60.0%
GACGAAGCTGGTACGGACGC+AGG + chr8.4:41472181-41472200 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 41472072 41474040 41472072 ID=MS.gene63210
chr8.4 mRNA 41472072 41474040 41472072 ID=MS.gene63210.t1;Parent=MS.gene63210
chr8.4 exon 41473568 41474040 41473568 ID=MS.gene63210.t1.exon1;Parent=MS.gene63210.t1
chr8.4 CDS 41473568 41474040 41473568 ID=cds.MS.gene63210.t1;Parent=MS.gene63210.t1
chr8.4 exon 41472682 41473135 41472682 ID=MS.gene63210.t1.exon2;Parent=MS.gene63210.t1
chr8.4 CDS 41472682 41473135 41472682 ID=cds.MS.gene63210.t1;Parent=MS.gene63210.t1
chr8.4 exon 41472435 41472584 41472435 ID=MS.gene63210.t1.exon3;Parent=MS.gene63210.t1
chr8.4 CDS 41472435 41472584 41472435 ID=cds.MS.gene63210.t1;Parent=MS.gene63210.t1
chr8.4 exon 41472072 41472350 41472072 ID=MS.gene63210.t1.exon4;Parent=MS.gene63210.t1
chr8.4 CDS 41472072 41472350 41472072 ID=cds.MS.gene63210.t1;Parent=MS.gene63210.t1
Gene Sequence

>MS.gene63210

ATGATGGTGGAAGAGTCAAGCTCCATTCGGCTGAGACTAGAGGACAGGATCAACACACTACCAATCTCCATACTGCATCACATCTTATCATTTCTCCCCACCAAAACCTGCGTCCGTACCAGCTTCGTCTGTCGCAGATGGCGCAACCTTTGGAAGAATCTCAAAACATTCAACTTCTGCGATAACTTCCACTGCATGATCTACGACGAAGACAACATCGAACAGTTCTTTCGTTTCACAGTTTTCGTCAATGTTGTGCTTTCTCTTCGTAGGTCACGCGACACTCGCAAGTTTCATCTCTCTTGCGCTCATTCCCCATCCGATCCATTCTTTGCTCTCTCAATCGAGACATGGATCAGTACCATCGTTGGACCTCACCTCGAGGAATTTCATCTCACTCTCCATTGTCTGGATTGGGTCGCCTTCAATATCCCTCAACCTCTTCTCTCTTGCTCCAACCTTGTCTCCGTTGGGTAATAATCCCTTTCATTCTCTCTCTCTCTATCAGGCCACTACTATTATAAGAAAAATTCACTTTTCTGATTCATTGACCAACTAATGTATTTACTAAGCACATATACGAGCACGAGACACGACACAGCACAAACACAGACATGTCGACATAACTAATAATTTGAAAAGTCATATAATTCAGTGTAATTACATGTGTCGGACACACCGATAATTCAGTGTAATTAAAGTGTCAGTGTCGGACACGAAACATGTCCGACACCGAGATACTCCTAATCTAAGGAGTGTCTTGGTCTCAGATAATTATTCAATGAATATGAAAATCAATTTTTGTTTCTAATTTTTGTTTATATTAGGGATCACTTATTTTTATTGTCTATAGTGTTCTGATTTTTTTTTTTTTAATGTGATTTGGTGATTTGAATGTACCTCAGTCTCTCTGGTTATATCTTGTTTCAATTACAAGACTCTTCGGGTATTTGCCTACCGTCATTGAAAGTGCTACAACTACTAGACATGTATCTCGTGGATTTGAATCCTGTGAATATCTTTCTTTCTGCCTGCCACGCTCTCGAAGATCTGGAAATGACCTTTGCTTCTGAACCTTTGGCCATACTTCGGGTGCCAACTTCCTTAAAGAGGTTGAAAATTATCGTTGACACTAAAGTTGGGGCTTGCCTTGAAATAGACACGCCTGATCTCAAGTACCTTAGCCTCACCAATGTTACAATCAGCCATGCAGCAACTATTGGAAACTTGCACAGCGTGGAAGAAGCATTTCTTGATGTACTTCCCACTCCTGAAAGTGAATCTGTTGAACCTTTACTCAATCTCCTCCGAGCTCTCTCCGGAATTAAACATCTCGAGCTGTTTAGTTCAACAACAAAGGTGTCGTAAGTCTTGATTATTTGTATTGTATGTAGTTTTTTTTACTAGTAACTATAAAATAATCAGTTAATCACTTGCTGTTGTCGTGTACTTGCAGTGGCTATCTGCTGCCCCAACTTCAGATTTTCCAGAATTTCGTTATTTACTTCACCTAGAGCTCTTTCTTCTCTCTTTCAACTTTAATTTTATATTCGACATGCTTCATAAATGTCCTATCCTGCAAACTCTGATAACATTCAATGACAAGGTATGTTCAGTTTAACTAAAGCTTTGATGTGTGTGTGTGTGTGTTTTGTTTGAATATTTTATGTGAGTTGCCCCTTGTTGCCAGATGGATCCATCGTTTGATTCATCACCTGCATATGGATGGGAGACGAAGCCTCAAAGTATTCCCAATTGTCTCGTATCACATTTGACCTTTATTAAATTTGCAGCATATCTAGGACATTTAAATGAGCTGGAATTTGCTAGATATGTTTTTCAAAATGGACTTGTTTTGAAGACAGTGCTTATTGATGGATTCTACATGATGAACGAACCGGAGGAGTGGAAGGAAAAAATTTCTGATCTGCCAAGGGGATCAGCGATGTGCCAACTTCAATTTCATTGA

Protein sequence

>MS.gene63210.t1

MMVEESSSIRLRLEDRINTLPISILHHILSFLPTKTCVRTSFVCRRWRNLWKNLKTFNFCDNFHCMIYDEDNIEQFFRFTVFVNVVLSLRRSRDTRKFHLSCAHSPSDPFFALSIETWISTIVGPHLEEFHLTLHCLDWVAFNIPQPLLSCSNLVSVGLSGYILFQLQDSSGICLPSLKVLQLLDMYLVDLNPVNIFLSACHALEDLEMTFASEPLAILRVPTSLKRLKIIVDTKVGACLEIDTPDLKYLSLTNVTISHAATIGNLHSVEEAFLDVLPTPESESVEPLLNLLRALSGIKHLELFSSTTKWLSAAPTSDFPEFRYLLHLELFLLSFNFNFIFDMLHKCPILQTLITFNDKMDPSFDSSPAYGWETKPQSIPNCLVSHLTFIKFAAYLGHLNELEFARYVFQNGLVLKTVLIDGFYMMNEPEEWKEKISDLPRGSAMCQLQFH