AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25418

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25418.t1 MTR_8g468760 78.873 355 44 2 1 355 34 357 0.0 526
MS.gene25418.t1 MTR_8g062270 73.429 350 89 3 1 347 41 389 2.13e-176 499
MS.gene25418.t1 MTR_5g092960 66.949 354 103 6 3 347 47 395 2.63e-139 405
MS.gene25418.t1 MTR_8g468840 64.146 357 120 5 2 355 40 391 8.70e-137 398
MS.gene25418.t1 MTR_5g092960 66.564 326 96 5 3 319 47 368 1.12e-126 370
MS.gene25418.t1 MTR_4g032730 58.286 350 134 6 3 349 43 383 1.72e-116 347
MS.gene25418.t1 MTR_8g467800 58.757 354 125 9 2 347 46 386 1.72e-112 336
MS.gene25418.t1 MTR_2g083840 55.429 350 142 4 1 347 47 385 2.50e-108 326
MS.gene25418.t1 MTR_8g468810 51.175 383 159 11 1 374 51 414 1.49e-106 321
MS.gene25418.t1 MTR_8g468810 54.128 327 133 7 1 319 51 368 7.08e-101 304
MS.gene25418.t1 MTR_8g058970 50.267 374 146 10 1 347 45 405 3.27e-93 288
MS.gene25418.t1 MTR_8g468810 56.226 265 107 4 1 264 51 307 4.79e-87 266
MS.gene25418.t1 MTR_8g468810 56.226 265 107 4 1 264 51 307 7.89e-87 266
MS.gene25418.t1 MTR_8g468810 56.226 265 107 4 1 264 51 307 1.12e-86 267
MS.gene25418.t1 MTR_8g467800 60.145 276 93 7 2 272 46 309 6.86e-82 254
MS.gene25418.t1 MTR_8g445780 44.134 358 171 10 4 355 41 375 1.33e-73 234
MS.gene25418.t1 MTR_4g050250 40.404 396 200 10 1 377 47 425 2.01e-66 217
MS.gene25418.t1 MTR_8g014260 40.496 363 188 12 4 355 44 389 8.77e-60 200
MS.gene25418.t1 MTR_8g058965 40.431 371 186 10 2 354 40 393 3.00e-59 199
MS.gene25418.t1 MTR_8g469020 37.398 369 201 9 2 354 34 388 4.75e-57 193
MS.gene25418.t1 MTR_8g062080 37.867 375 192 11 1 365 49 392 4.88e-54 185
MS.gene25418.t1 MTR_8g070950 38.333 360 187 8 1 354 41 371 5.37e-53 182
MS.gene25418.t1 MTR_8g062310 38.352 352 176 11 4 354 54 365 3.17e-50 174
MS.gene25418.t1 MTR_8g014160 42.446 278 147 9 2 272 67 338 6.99e-45 160
MS.gene25418.t1 MTR_8g062010 36.111 360 197 10 1 354 35 367 3.53e-43 156
MS.gene25418.t1 MTR_8g467790 32.687 361 188 11 1 354 174 486 4.46e-37 140
MS.gene25418.t1 MTR_8g062300 32.300 387 195 12 1 349 52 409 1.16e-35 136
MS.gene25418.t1 MTR_4g024710 40.000 230 125 6 122 347 58 278 4.89e-33 127
MS.gene25418.t1 MTR_8g077460 42.211 199 102 6 4 196 38 229 5.03e-32 124
MS.gene25418.t1 MTR_8g014210 47.904 167 78 5 182 347 4 162 5.52e-31 118
MS.gene25418.t1 MTR_4g024745 40.086 232 126 6 120 347 10 232 2.34e-28 112
MS.gene25418.t1 MTR_8g014290 45.161 124 62 5 4 122 38 160 4.06e-22 92.4
MS.gene25418.t1 MTR_5g021550 45.902 122 56 5 4 121 47 162 4.06e-22 92.4
MS.gene25418.t1 MTR_4g113810 39.024 164 93 5 62 220 1 162 4.50e-17 78.6
MS.gene25418.t1 MTR_2g086020 39.474 152 72 4 1 147 1 137 1.53e-16 80.1
MS.gene25418.t1 MTR_8g014220 42.969 128 61 6 44 166 40 160 1.51e-13 68.6
MS.gene25418.t1 MTR_4g024720 39.130 138 58 6 4 121 45 176 4.41e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25418.t1 AT5G53840 26.287 369 239 14 2 364 44 385 4.60e-17 82.8
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 4.60e-17 82.0
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 4.60e-17 82.0
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 47 358 8.91e-17 81.6
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 1.15e-16 81.3
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 1.15e-16 81.3
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 1.15e-16 81.3
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 1.15e-16 81.3
MS.gene25418.t1 AT1G06630 28.483 323 212 9 2 316 38 349 1.51e-16 81.6
MS.gene25418.t1 AT1G06630 29.151 271 179 7 2 270 38 297 1.65e-15 77.0
MS.gene25418.t1 AT5G56410 27.132 387 231 16 2 365 29 387 9.50e-15 76.3
MS.gene25418.t1 AT5G38590 26.316 361 225 15 2 355 28 354 1.65e-13 72.0
MS.gene25418.t1 AT1G16930 31.222 221 126 11 2 215 41 242 1.71e-13 72.0
MS.gene25418.t1 AT1G16930 31.222 221 126 11 2 215 41 242 1.71e-13 72.0
MS.gene25418.t1 AT1G16930 31.222 221 126 11 2 215 41 242 1.71e-13 72.0
MS.gene25418.t1 AT1G69630 26.901 342 201 14 2 318 44 361 1.83e-12 68.9
MS.gene25418.t1 AT2G04230 27.901 362 215 15 2 347 39 370 5.14e-12 67.4
MS.gene25418.t1 AT5G38590 26.937 271 167 11 2 266 28 273 5.91e-12 66.2
MS.gene25418.t1 AT4G10400 28.329 353 194 19 2 323 28 352 7.98e-12 66.6
MS.gene25418.t1 AT4G10400 28.329 353 194 19 2 323 28 352 7.98e-12 66.6
MS.gene25418.t1 AT4G10400 28.329 353 194 19 2 323 28 352 7.98e-12 66.6
MS.gene25418.t1 AT4G10420 31.408 277 155 16 82 347 2 254 1.62e-11 65.5
MS.gene25418.t1 AT5G38590 28.634 227 141 9 46 266 27 238 1.84e-11 64.3
MS.gene25418.t1 AT3G26930 29.121 364 199 20 1 347 46 367 5.36e-11 64.3
MS.gene25418.t1 AT3G26930 28.846 364 200 20 1 347 1 322 5.83e-11 63.9
MS.gene25418.t1 AT5G56700 28.159 277 176 12 79 347 52 313 6.63e-11 63.5

Find 93 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATCTTTGGCCATAATT+TGG 0.135448 8.2:-40491606 MS.gene25418:CDS
GGTTCAACAGATTCACTTTC+AGG 0.185864 8.2:+40491406 None:intergenic
CAACAGGGTGTGGAGATTTA+TGG 0.226393 8.2:-40488878 MS.gene25418:CDS
TTCATTTAGTCCTGAATCTT+TGG 0.229251 8.2:-40491617 MS.gene25418:CDS
CAAATTATGGCCAAAGATTC+AGG 0.274036 8.2:+40491607 None:intergenic
TGAATCTTTGGCCATAATTT+GGG 0.283925 8.2:-40491605 MS.gene25418:CDS
TGAAGCAAATAACGAAATTC+TGG 0.290681 8.2:+40491191 None:intergenic
GGAAGATGGCACCCAAATTA+TGG 0.305140 8.2:+40491594 None:intergenic
AAATGGGATACGAGGCATTT+AGG 0.313493 8.2:+40490926 None:intergenic
GAGTATGCGGCGAAGGGGTC+GGG 0.317395 8.2:+40492694 None:intergenic
AAAGGTATATTTAGAGCAAC+AGG 0.317643 8.2:-40488894 MS.gene25418:CDS
TGGTCGGGTGCAGCGTAATA+TGG 0.324685 8.2:-40488928 MS.gene25418:intron
CTCGTAAATGCCGCAACCTT+TGG 0.334620 8.2:-40492891 MS.gene25418:CDS
CTGCTCCATTCTCGAAAATC+TGG 0.340927 8.2:-40491644 MS.gene25418:CDS
AATTCTGGAAAATCTAAAAC+AGG 0.355307 8.2:+40491206 None:intergenic
TTCATCACCTTCATATAGAT+TGG 0.357209 8.2:-40490969 MS.gene25418:CDS
CACAACATATCTGTTCATAA+AGG 0.387711 8.2:-40491090 MS.gene25418:intron
AAAAGACCTCACAGCTTAAT+CGG 0.400891 8.2:+40488820 None:intergenic
TTCTGCAATGCCGCTGCTGT+TGG 0.415216 8.2:-40491475 MS.gene25418:CDS
TGAGTATGCGGCGAAGGGGT+CGG 0.425649 8.2:+40492693 None:intergenic
CAGCAAGAGAAGAGTGTAAG+AGG 0.429448 8.2:+40492583 None:intergenic
TTTAACCTCTTCAAGGAAGA+TGG 0.437384 8.2:+40491580 None:intergenic
GAAAACTTCAGTCACCTTTG+TGG 0.437723 8.2:+40491324 None:intergenic
CTCTTCAAGGTGGGGTCCAA+TGG 0.453187 8.2:+40492648 None:intergenic
GCTGCAATTGCAAGAATCTT+CGG 0.454485 8.2:-40491749 MS.gene25418:CDS
ATGTGATACGTTTGAGGCTA+AGG 0.460092 8.2:+40491497 None:intergenic
TCTGCAATGCCGCTGCTGTT+GGG 0.469306 8.2:-40491474 MS.gene25418:CDS
TGCAGAATGTGATACGTTTG+AGG 0.473408 8.2:+40491491 None:intergenic
GTCAATTGAGTATGCGGCGA+AGG 0.473628 8.2:+40492687 None:intergenic
TGAATTCGTCGTCGGGACCT+TGG 0.480798 8.2:+40492818 None:intergenic
GTAATTTACCTCAGTCTCAA+TGG 0.489139 8.2:-40491781 MS.gene25418:intron
AGTATGCGGCGAAGGGGTCG+GGG 0.493635 8.2:+40492695 None:intergenic
GTTTAAGTCCGGAGAGAGCT+CGG 0.496233 8.2:+40491368 None:intergenic
TTGTTCGTTGAATTCGTCGT+CGG 0.498675 8.2:+40492810 None:intergenic
AATCTCCTCCGAGCTCTCTC+CGG 0.499349 8.2:-40491376 MS.gene25418:CDS
TAGCTCTAGATGTTTAAGTC+CGG 0.499569 8.2:+40491357 None:intergenic
TGTTCGTTGAATTCGTCGTC+GGG 0.501879 8.2:+40492811 None:intergenic
GCTCTAACCTTGTCTCCCTC+AGG 0.503869 8.2:-40492561 MS.gene25418:intron
CTCACTATCTTCTCTGCCGA+CGG 0.504488 8.2:-40492619 MS.gene25418:CDS
TAGTGAGATGAAACTCTTCA+AGG 0.509192 8.2:+40492635 None:intergenic
TTCGTCGTCGGGACCTTGGT+AGG 0.509204 8.2:+40492822 None:intergenic
ATATTTAGAGCAACAGGGTG+TGG 0.519404 8.2:-40488888 MS.gene25418:CDS
AACAGATTCACTTTCAGGAG+TGG 0.531982 8.2:+40491411 None:intergenic
GAGGACAGTGTTGACGAAAA+CGG 0.535324 8.2:+40492774 None:intergenic
GTACAAGCAGTGGCTATTTG+CGG 0.537276 8.2:-40491231 MS.gene25418:intron
ATCACCTTCATATAGATTGG+AGG 0.544393 8.2:-40490966 MS.gene25418:CDS
CGAGAGTCTTCCAAAGGTTG+CGG 0.554031 8.2:+40492881 None:intergenic
GTTGTGAGAGATTGTAGCAT+AGG 0.560170 8.2:+40491107 None:intergenic
TCAATTGAGTATGCGGCGAA+GGG 0.561719 8.2:+40492688 None:intergenic
TTTGCCTCCAATCTATATGA+AGG 0.562201 8.2:+40490962 None:intergenic
AGCAGTTGAGGACCTCCAAA+AGG 0.562235 8.2:+40488846 None:intergenic
AGATGTGATCGCAGGAGAGA+CGG 0.568337 8.2:+40492719 None:intergenic
TACGAATGACGCGTGAGCGA+CGG 0.569459 8.2:+40492746 None:intergenic
GGGTGCCATCTTCCTTGAAG+AGG 0.569713 8.2:-40491585 MS.gene25418:CDS
ATCACCGCTGAGGATGAGGT+TGG 0.573986 8.2:-40491556 MS.gene25418:CDS
TATTTGCTTCATCTACAGCT+CGG 0.576315 8.2:-40491179 MS.gene25418:CDS
GAGATGAAACTCTTCAAGGT+GGG 0.577504 8.2:+40492639 None:intergenic
GAATGGAGCAGCGAGAGAGA+AGG 0.584558 8.2:+40491656 None:intergenic
TTAAACATCTAGAGCTACAA+AGG 0.588204 8.2:-40491351 MS.gene25418:CDS
GCGAGAGAGAAGGATATTCA+CGG 0.590240 8.2:+40491666 None:intergenic
AGGCTAAGGTACTTGAGACC+AGG 0.591768 8.2:+40491511 None:intergenic
ACGTGGATCAGTACTGCCAT+TGG 0.595604 8.2:-40492664 MS.gene25418:CDS
GCTCGGAGGAGATTGAGTAA+AGG 0.595653 8.2:+40491385 None:intergenic
CGCGTGAGCGACGGAGAGCG+AGG 0.599569 8.2:+40492755 None:intergenic
CTTAATCGGACAAGCAGTTG+AGG 0.603050 8.2:+40488834 None:intergenic
AGTTGCAGCGCCTTCAGTGA+CGG 0.607429 8.2:+40491715 None:intergenic
AGATGAAACTCTTCAAGGTG+GGG 0.608241 8.2:+40492640 None:intergenic
ACCTTGGTAGGTGTACTCGT+TGG 0.609264 8.2:+40492834 None:intergenic
GTGCAAGTTCCCAACAGCAG+CGG 0.612349 8.2:+40491465 None:intergenic
ATTGTTACCTGAGGGAGACA+AGG 0.617581 8.2:+40492554 None:intergenic
GTCGGGGTAGATGTGATCGC+AGG 0.618469 8.2:+40492711 None:intergenic
TTCTGGAAAATCTAAAACAG+GGG 0.621912 8.2:+40491208 None:intergenic
TCGCTTGAAATAGATGCACC+TGG 0.623810 8.2:-40491529 MS.gene25418:CDS
GCAACTACTAGAGTACCGCT+TGG 0.626436 8.2:-40491698 MS.gene25418:CDS
CCACGTGTCAATTGAGTATG+CGG 0.630561 8.2:+40492681 None:intergenic
AGGCAGATTATTGAAACCGT+CGG 0.642854 8.2:+40492603 None:intergenic
TGTACTCGTTGGTGTTGTCG+TGG 0.645194 8.2:+40492845 None:intergenic
AATATGGTTAGAGCTATCAA+AGG 0.647976 8.2:-40488912 MS.gene25418:CDS
TGAGATGAAACTCTTCAAGG+TGG 0.648671 8.2:+40492638 None:intergenic
AGACGTCGAGAGTCTTCCAA+AGG 0.654356 8.2:+40492875 None:intergenic
CCGCATACTCAATTGACACG+TGG 0.661374 8.2:-40492681 MS.gene25418:CDS
CAATTGAGTATGCGGCGAAG+GGG 0.661752 8.2:+40492689 None:intergenic
ATTCTGGAAAATCTAAAACA+GGG 0.665662 8.2:+40491207 None:intergenic
AGCTCCAACCTCATCCTCAG+CGG 0.667702 8.2:+40491552 None:intergenic
GCTACAAAGGTTAACCACAA+AGG 0.672042 8.2:-40491338 MS.gene25418:intron
GAAGGTGATGAATCATACGA+TGG 0.676320 8.2:+40490980 None:intergenic
ACCAACGAGTACACCTACCA+AGG 0.690037 8.2:-40492835 MS.gene25418:CDS
TGCGGCATTTACGAGAGACG+AGG 0.707565 8.2:+40492899 None:intergenic
TAAGTCCGGAGAGAGCTCGG+AGG 0.709180 8.2:+40491371 None:intergenic
TGTTGGGAACTTGCACAGCG+TGG 0.717427 8.2:-40491458 MS.gene25418:CDS
TCACGGAATTCAAATCCAAG+CGG 0.723562 8.2:+40491683 None:intergenic
AAGGTATATTTAGAGCAACA+GGG 0.727952 8.2:-40488893 MS.gene25418:CDS
GCTTGTCCGATTAAGCTGTG+AGG 0.748023 8.2:-40488826 MS.gene25418:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGACAAAAAAAAAATTA+AGG - chr8.2:40492707-40492726 MS.gene25418:CDS 10.0%
!! TTTATGAATTGTAATAAATA+GGG + chr8.2:40492151-40492170 None:intergenic 10.0%
!!! AAACAATATAGTTTAAAATT+TGG + chr8.2:40491140-40491159 None:intergenic 10.0%
!!! AATATATCTCATATTTTAAT+TGG + chr8.2:40492413-40492432 None:intergenic 10.0%
!!! TGTAATTTTTTTTTCTTTTT+TGG - chr8.2:40489426-40489445 MS.gene25418:intron 10.0%
!!! TTTTATGAATTGTAATAAAT+AGG + chr8.2:40492152-40492171 None:intergenic 10.0%
!! AATTAAGTAATTGATAGAAA+TGG - chr8.2:40492066-40492085 MS.gene25418:intron 15.0%
!! ACAAAAAAATAAAACAAAAG+AGG + chr8.2:40489203-40489222 None:intergenic 15.0%
!! ATAAACAAATTTAGATACTT+CGG + chr8.2:40491190-40491209 None:intergenic 15.0%
!! CAATGATTATTTATGAATAT+TGG - chr8.2:40490902-40490921 MS.gene25418:intron 15.0%
!!! AATAAAATATTTTACACACT+AGG + chr8.2:40489608-40489627 None:intergenic 15.0%
!!! ATTTTAAACTATATTGTTTG+TGG - chr8.2:40491141-40491160 MS.gene25418:CDS 15.0%
!! AATTAAGGAATTATATGAGA+AGG + chr8.2:40492248-40492267 None:intergenic 20.0%
!! AGTACTAAACATACAAAATT+AGG + chr8.2:40489772-40489791 None:intergenic 20.0%
!! ATTAAGGAATTATATGAGAA+GGG + chr8.2:40492247-40492266 None:intergenic 20.0%
!! GAATTGATTATATATTTGCA+AGG - chr8.2:40489668-40489687 MS.gene25418:intron 20.0%
!! TAAACAAATTTAGATACTTC+GGG + chr8.2:40491189-40491208 None:intergenic 20.0%
!! TAAACTAAGCAAAATAATTG+TGG + chr8.2:40489865-40489884 None:intergenic 20.0%
!!! AAATTGATTCATATTGGATT+TGG - chr8.2:40489514-40489533 MS.gene25418:intron 20.0%
!!! AACATAGAATTTTTTGCTTT+TGG - chr8.2:40489463-40489482 MS.gene25418:intron 20.0%
!!! AACCAAAAAAGTATTTTTAC+AGG - chr8.2:40489696-40489715 MS.gene25418:intron 20.0%
!!! CTTACAAAATTGATTCATAT+TGG - chr8.2:40489508-40489527 MS.gene25418:intron 20.0%
!!! TGAAATTTTGTGTTGTTTTT+AGG - chr8.2:40489351-40489370 MS.gene25418:intron 20.0%
!!! TTCCTGTAAAAATACTTTTT+TGG + chr8.2:40489701-40489720 None:intergenic 20.0%
! AAAAAATTTCTGATCTACCA+AGG - chr8.2:40490965-40490984 MS.gene25418:CDS 25.0%
! AAAAATTTCTGATCTACCAA+GGG - chr8.2:40490966-40490985 MS.gene25418:CDS 25.0%
! AAACAAATTTAGATACTTCG+GGG + chr8.2:40491188-40491207 None:intergenic 25.0%
! AAAGCTAATAAATAGCTGAA+TGG + chr8.2:40492293-40492312 None:intergenic 25.0%
! AACTGTAAAAAAGTTTGTGT+AGG - chr8.2:40492652-40492671 MS.gene25418:CDS 25.0%
! ATAAAACAAAAGAGGATGAA+AGG + chr8.2:40489195-40489214 None:intergenic 25.0%
! ATAATTGGTTAAAGGTAAGA+AGG - chr8.2:40492509-40492528 MS.gene25418:intron 25.0%
! CAAAAAGCTTGATATTTGTA+TGG + chr8.2:40489395-40489414 None:intergenic 25.0%
! CAAAAGGTTTGATATTTACA+AGG - chr8.2:40489728-40489747 MS.gene25418:intron 25.0%
! GTTTCTATTGTCAAGTATTA+TGG + chr8.2:40492578-40492597 None:intergenic 25.0%
! TAAGCAACATAGAATAAAGA+CGG + chr8.2:40491053-40491072 None:intergenic 25.0%
! TAATAGCCAACTACAAAAAA+CGG + chr8.2:40491681-40491700 None:intergenic 25.0%
! TACAACAACAAATTGAGTTT+AGG + chr8.2:40491350-40491369 None:intergenic 25.0%
! TACTCAAAATTTGCATGAAT+TGG + chr8.2:40492336-40492355 None:intergenic 25.0%
! TGGAATTTGGTTAGAATTAT+GGG - chr8.2:40491462-40491481 MS.gene25418:CDS 25.0%
! TTAAACTATATTGTTTGTGG+TGG - chr8.2:40491144-40491163 MS.gene25418:CDS 25.0%
! TTAAGGAATTATATGAGAAG+GGG + chr8.2:40492246-40492265 None:intergenic 25.0%
! TTGGAATTTGGTTAGAATTA+TGG - chr8.2:40491461-40491480 MS.gene25418:CDS 25.0%
!! AATTCTGGAAAATCTAAAAC+AGG + chr8.2:40490519-40490538 None:intergenic 25.0%
!! ATTCTGGAAAATCTAAAACA+GGG + chr8.2:40490518-40490537 None:intergenic 25.0%
!! CATACAAATATCAAGCTTTT+TGG - chr8.2:40489393-40489412 MS.gene25418:intron 25.0%
!! CTTGTAAATATCAAACCTTT+TGG + chr8.2:40489730-40489749 None:intergenic 25.0%
!! TAATAAGAACTAAGAAGTGT+GGG + chr8.2:40491816-40491835 None:intergenic 25.0%
!!! TTATGGTTTTATCAACCTTT+TGG - chr8.2:40492861-40492880 MS.gene25418:CDS 25.0%
!!! TTGTTTGGTTTGATTCATAT+TGG - chr8.2:40489575-40489594 MS.gene25418:intron 25.0%
AAAATTTCTGATCTACCAAG+GGG - chr8.2:40490967-40490986 MS.gene25418:CDS 30.0%
AAAGCGAATAAAGGTCAAAT+GGG + chr8.2:40490815-40490834 None:intergenic 30.0%
AACAAATTTAGATACTTCGG+GGG + chr8.2:40491187-40491206 None:intergenic 30.0%
ACAATAGAAACGTATGTAGA+AGG - chr8.2:40492587-40492606 MS.gene25418:CDS 30.0%
AGACTAAGAGGGAATATAAT+TGG - chr8.2:40492494-40492513 MS.gene25418:intron 30.0%
AGCACTAAAACATAACAACA+AGG + chr8.2:40489490-40489509 None:intergenic 30.0%
ATATCCTTGAAAGCGAATAA+AGG + chr8.2:40490824-40490843 None:intergenic 30.0%
ATGTTTGTGACATTCTTATC+GGG - chr8.2:40492754-40492773 MS.gene25418:CDS 30.0%
ATTCGCTTTCAAGGATATAT+AGG - chr8.2:40490826-40490845 MS.gene25418:intron 30.0%
ATTGATCATGGATTCTCATT+AGG + chr8.2:40491843-40491862 None:intergenic 30.0%
CAATAGAAACGTATGTAGAA+GGG - chr8.2:40492588-40492607 MS.gene25418:CDS 30.0%
CACAACATATCTGTTCATAA+AGG - chr8.2:40490632-40490651 MS.gene25418:intron 30.0%
CATGTTTGTGACATTCTTAT+CGG - chr8.2:40492753-40492772 MS.gene25418:CDS 30.0%
CTTCCTAACATAGATTATCA+CGG - chr8.2:40491551-40491570 MS.gene25418:CDS 30.0%
GAAATGAGCTGGAATTTATT+GGG - chr8.2:40490848-40490867 MS.gene25418:intron 30.0%
GAGGGAATATAATTGGTTAA+AGG - chr8.2:40492501-40492520 MS.gene25418:intron 30.0%
GGTTTGATTCATATTGGATT+TGG - chr8.2:40489581-40489600 MS.gene25418:intron 30.0%
GTAATAAGAACTAAGAAGTG+TGG + chr8.2:40491817-40491836 None:intergenic 30.0%
GTTCAATATAGTCCTAACTA+GGG - chr8.2:40491246-40491265 MS.gene25418:intron 30.0%
GTTTAGGAATTACAAAGAGA+CGG + chr8.2:40491334-40491353 None:intergenic 30.0%
TACTGTTAGACGTCTAATTA+AGG + chr8.2:40492263-40492282 None:intergenic 30.0%
TATATTGAACATAACTCCTC+AGG + chr8.2:40491236-40491255 None:intergenic 30.0%
TCCTATAATACTCACTTTGA+AGG + chr8.2:40489636-40489655 None:intergenic 30.0%
TCCTTCAAAGTGAGTATTAT+AGG - chr8.2:40489632-40489651 MS.gene25418:intron 30.0%
TGAAGCAAATAACGAAATTC+TGG + chr8.2:40490534-40490553 None:intergenic 30.0%
TGAATCTTTGGCCATAATTT+GGG - chr8.2:40490117-40490136 MS.gene25418:intron 30.0%
TGTAATAAATAGGGAAGTTG+TGG + chr8.2:40492142-40492161 None:intergenic 30.0%
TGTTCAATATAGTCCTAACT+AGG - chr8.2:40491245-40491264 MS.gene25418:intron 30.0%
TTACAGGAACTAAAACCAAA+AGG - chr8.2:40489712-40489731 MS.gene25418:intron 30.0%
TTCATCACCTTCATATAGAT+TGG - chr8.2:40490753-40490772 MS.gene25418:intron 30.0%
TTCATTTAGTCCTGAATCTT+TGG - chr8.2:40490105-40490124 MS.gene25418:intron 30.0%
TTCCTAACATAGATTATCAC+GGG - chr8.2:40491552-40491571 MS.gene25418:CDS 30.0%
TTGATCATGGATTCTCATTA+GGG + chr8.2:40491842-40491861 None:intergenic 30.0%
! AAAGGTATATTTAGAGCAAC+AGG - chr8.2:40492828-40492847 MS.gene25418:CDS 30.0%
! AAGGTATATTTAGAGCAACA+GGG - chr8.2:40492829-40492848 MS.gene25418:CDS 30.0%
! AATTAAGGACGTTTTTCCTA+AGG - chr8.2:40492722-40492741 MS.gene25418:CDS 30.0%
! AGAAAATACAGGTTGGAATT+TGG - chr8.2:40491449-40491468 MS.gene25418:CDS 30.0%
! ATTGGGTATGTTTTGCAAAA+TGG - chr8.2:40490865-40490884 MS.gene25418:intron 30.0%
! CACTAAAGCTTTAGTTAAAC+TGG + chr8.2:40490663-40490682 None:intergenic 30.0%
! TATTCGGTTATTTGGGATAA+AGG + chr8.2:40492107-40492126 None:intergenic 30.0%
! TTAAACATCTAGAGCTACAA+AGG - chr8.2:40490371-40490390 MS.gene25418:intron 30.0%
! TTCATATTGGATTTGGTCTT+TGG - chr8.2:40489521-40489540 MS.gene25418:intron 30.0%
! TTCTGGAAAATCTAAAACAG+GGG + chr8.2:40490517-40490536 None:intergenic 30.0%
! TTTTCTGATAGATAAACCTG+AGG - chr8.2:40491217-40491236 MS.gene25418:CDS 30.0%
!! AATTTCCAGATTTTCGAGAA+TGG + chr8.2:40490086-40490105 None:intergenic 30.0%
!! TAAGCTTAACTGAGTTGATA+AGG - chr8.2:40489254-40489273 MS.gene25418:intron 30.0%
!!! CAATTTCCGTTTTTTGTAGT+TGG - chr8.2:40491672-40491691 MS.gene25418:CDS 30.0%
!!! CATACTTTGTTTTTCTCAAG+TGG + chr8.2:40489327-40489346 None:intergenic 30.0%
AAAAGACCTCACAGCTTAAT+CGG + chr8.2:40492905-40492924 None:intergenic 35.0%
AAGGAATGTCAACAAAGTGA+TGG + chr8.2:40491534-40491553 None:intergenic 35.0%
ACCAAACAATTAAGCTCAAG+TGG + chr8.2:40489564-40489583 None:intergenic 35.0%
ACCACTTGAGCTTAATTGTT+TGG - chr8.2:40489560-40489579 MS.gene25418:intron 35.0%
AGACTAAGGGGGAATATAAT+TGG - chr8.2:40492464-40492483 MS.gene25418:intron 35.0%
AGGAATGTCAACAAAGTGAT+GGG + chr8.2:40491533-40491552 None:intergenic 35.0%
AGGATATATAGGAAATGAGC+TGG - chr8.2:40490837-40490856 MS.gene25418:intron 35.0%
ATCACCTTCATATAGATTGG+AGG - chr8.2:40490756-40490775 MS.gene25418:intron 35.0%
ATGAAAGGAATTGTTACCTG+AGG + chr8.2:40489180-40489199 None:intergenic 35.0%
CAAACATGTATTGAGACCTT+AGG + chr8.2:40492741-40492760 None:intergenic 35.0%
CAAATTATGGCCAAAGATTC+AGG + chr8.2:40490118-40490137 None:intergenic 35.0%
CAGCTCACCAAAATTTAACT+TGG + chr8.2:40491005-40491024 None:intergenic 35.0%
CGTGATAATCTATGTTAGGA+AGG + chr8.2:40491553-40491572 None:intergenic 35.0%
CTGAATCTTTGGCCATAATT+TGG - chr8.2:40490116-40490135 MS.gene25418:intron 35.0%
GAAAGCGAATAAAGGTCAAA+TGG + chr8.2:40490816-40490835 None:intergenic 35.0%
GGAAATGAGCTGGAATTTAT+TGG - chr8.2:40490847-40490866 MS.gene25418:intron 35.0%
GTAATTTACCTCAGTCTCAA+TGG - chr8.2:40489941-40489960 MS.gene25418:intron 35.0%
GTTGTAAGTGATTTCCTTGT+TGG - chr8.2:40491364-40491383 MS.gene25418:CDS 35.0%
TAGACTCTCGAATTCCTAAT+GGG - chr8.2:40491290-40491309 MS.gene25418:intron 35.0%
TAGTGAGATGAAACTCTTCA+AGG + chr8.2:40489090-40489109 None:intergenic 35.0%
TATTTGCTTCATCTACAGCT+CGG - chr8.2:40490543-40490562 MS.gene25418:intron 35.0%
TCCTAACATAGATTATCACG+GGG - chr8.2:40491553-40491572 MS.gene25418:CDS 35.0%
TGAAAGGAATTGTTACCTGA+GGG + chr8.2:40489179-40489198 None:intergenic 35.0%
TGATCATGGATTCTCATTAG+GGG + chr8.2:40491841-40491860 None:intergenic 35.0%
TTGACCTTTATTCGCTTTCA+AGG - chr8.2:40490817-40490836 MS.gene25418:intron 35.0%
TTTAACCTCTTCAAGGAAGA+TGG + chr8.2:40490145-40490164 None:intergenic 35.0%
TTTGCCTCCAATCTATATGA+AGG + chr8.2:40490763-40490782 None:intergenic 35.0%
! AATCTGACCAAAGTCTGTTT+TGG - chr8.2:40492211-40492230 MS.gene25418:intron 35.0%
! AGGCATTTAGGAACACTTTT+AGG + chr8.2:40490787-40490806 None:intergenic 35.0%
! ATTTGGGATAAAGGATTGGT+AGG + chr8.2:40492098-40492117 None:intergenic 35.0%
! CCATGTGCCAAGTTAAATTT+TGG - chr8.2:40490995-40491014 MS.gene25418:intron 35.0%
! GGTGATTTTTAACCTCTTCA+AGG + chr8.2:40490152-40490171 None:intergenic 35.0%
! GGTTATTTGGGATAAAGGAT+TGG + chr8.2:40492102-40492121 None:intergenic 35.0%
! GTTGATAAGGACATTGTAGT+AGG - chr8.2:40489267-40489286 MS.gene25418:intron 35.0%
! TATTGGATTTGGTCTTTGGT+TGG - chr8.2:40489525-40489544 MS.gene25418:intron 35.0%
! TGCTTTTAATCCCTAGATGT+CGG - chr8.2:40489820-40489839 MS.gene25418:intron 35.0%
! TTTGGGATAAAGGATTGGTA+GGG + chr8.2:40492097-40492116 None:intergenic 35.0%
!! AATCATACGATGGATTTTCC+TGG + chr8.2:40490735-40490754 None:intergenic 35.0%
!! CCAAAATTTAACTTGGCACA+TGG + chr8.2:40490998-40491017 None:intergenic 35.0%
!! TAGCTCTAGATGTTTAAGTC+CGG + chr8.2:40490368-40490387 None:intergenic 35.0%
!! TATGTAGAAGGGTAGTTTTG+AGG - chr8.2:40492599-40492618 MS.gene25418:CDS 35.0%
!! TTTTTAGTCTCCGACATCTA+GGG + chr8.2:40489833-40489852 None:intergenic 35.0%
!!! TGGTTTTATCAACCTTTTGG+AGG - chr8.2:40492864-40492883 MS.gene25418:CDS 35.0%
AAATAGCCACTGCTTGTACA+TGG + chr8.2:40490490-40490509 None:intergenic 40.0%
AACAGATTCACTTTCAGGAG+TGG + chr8.2:40490314-40490333 None:intergenic 40.0%
AACTAGGGAGTTGCTAGATT+AGG - chr8.2:40491261-40491280 MS.gene25418:intron 40.0%
AATCTAGCAACTCCCTAGTT+AGG + chr8.2:40491261-40491280 None:intergenic 40.0%
ACTACAAGTAGATCCATTGC+AGG + chr8.2:40491506-40491525 None:intergenic 40.0%
ACTGTGATCATGACAGACTA+AGG - chr8.2:40492450-40492469 MS.gene25418:intron 40.0%
AGATATAGCCATTGAGACTG+AGG + chr8.2:40489952-40489971 None:intergenic 40.0%
AGATGAAACTCTTCAAGGTG+GGG + chr8.2:40489085-40489104 None:intergenic 40.0%
AGGCAGATTATTGAAACCGT+CGG + chr8.2:40489122-40489141 None:intergenic 40.0%
ATTGGTCATGACAGACTAAG+AGG - chr8.2:40492482-40492501 MS.gene25418:intron 40.0%
ATTTAGATACTTCGGGGGTA+TGG + chr8.2:40491182-40491201 None:intergenic 40.0%
CTACAAGTAGATCCATTGCA+GGG + chr8.2:40491505-40491524 None:intergenic 40.0%
CTAGACTCTCGAATTCCTAA+TGG - chr8.2:40491289-40491308 MS.gene25418:intron 40.0%
CTGCACAATTAGATTTCCCT+TGG - chr8.2:40491098-40491117 MS.gene25418:CDS 40.0%
CTGTGATCATGACAGACTAA+GGG - chr8.2:40492451-40492470 MS.gene25418:intron 40.0%
GAAAACTTCAGTCACCTTTG+TGG + chr8.2:40490401-40490420 None:intergenic 40.0%
GAAGGTGATGAATCATACGA+TGG + chr8.2:40490745-40490764 None:intergenic 40.0%
GAATCCATGATCAATTCTCG+TGG - chr8.2:40491848-40491867 MS.gene25418:intron 40.0%
GAGAAGACCAAAACAGACTT+TGG + chr8.2:40492221-40492240 None:intergenic 40.0%
GAGATGAAACTCTTCAAGGT+GGG + chr8.2:40489086-40489105 None:intergenic 40.0%
GAGTGAGAGAAAATACAGGT+TGG - chr8.2:40491442-40491461 MS.gene25418:CDS 40.0%
GCTACAAAGGTTAACCACAA+AGG - chr8.2:40490384-40490403 MS.gene25418:intron 40.0%
GCTGCAATTGCAAGAATCTT+CGG - chr8.2:40489973-40489992 MS.gene25418:intron 40.0%
GGATCGGTATTCGGTTATTT+GGG + chr8.2:40492114-40492133 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG + chr8.2:40490319-40490338 None:intergenic 40.0%
GTACTCCAATAGATGACCAT+CGG - chr8.2:40491730-40491749 MS.gene25418:CDS 40.0%
GTGTGAGTGAGAGAAAATAC+AGG - chr8.2:40491438-40491457 MS.gene25418:CDS 40.0%
GTTGTGAGAGATTGTAGCAT+AGG + chr8.2:40490618-40490637 None:intergenic 40.0%
TAAAGGTCAAATGGGATACG+AGG + chr8.2:40490807-40490826 None:intergenic 40.0%
TCACGGAATTCAAATCCAAG+CGG + chr8.2:40490042-40490061 None:intergenic 40.0%
TCCCCGTGATAATCTATGTT+AGG + chr8.2:40491557-40491576 None:intergenic 40.0%
TGAGATGAAACTCTTCAAGG+TGG + chr8.2:40489087-40489106 None:intergenic 40.0%
TGCAATGGATCTACTTGTAG+TGG - chr8.2:40491505-40491524 MS.gene25418:CDS 40.0%
TGCAGAATGTGATACGTTTG+AGG + chr8.2:40490234-40490253 None:intergenic 40.0%
TGTGATCATGACAGACTAAG+GGG - chr8.2:40492452-40492471 MS.gene25418:intron 40.0%
TTGGTCATGACAGACTAAGA+GGG - chr8.2:40492483-40492502 MS.gene25418:intron 40.0%
TTGTTCGTTGAATTCGTCGT+CGG + chr8.2:40488915-40488934 None:intergenic 40.0%
TTTAAAGATCAGCCCTGCAA+TGG - chr8.2:40491490-40491509 MS.gene25418:CDS 40.0%
TTTGTGACATTCTTATCGGG+CGG - chr8.2:40492757-40492776 MS.gene25418:CDS 40.0%
! AAATGGGATACGAGGCATTT+AGG + chr8.2:40490799-40490818 None:intergenic 40.0%
! AGCAAACTTTGTGCTACTGA+CGG + chr8.2:40492027-40492046 None:intergenic 40.0%
! ATATTTAGAGCAACAGGGTG+TGG - chr8.2:40492834-40492853 MS.gene25418:CDS 40.0%
! ATGGATTTTCCTGGCAACAA+TGG + chr8.2:40490726-40490745 None:intergenic 40.0%
! ATGTGATACGTTTGAGGCTA+AGG + chr8.2:40490228-40490247 None:intergenic 40.0%
! ATTTTGCTTACCGTCACTGA+AGG - chr8.2:40489997-40490016 MS.gene25418:intron 40.0%
! CAGCGTGCATTTAAAACCAA+GGG + chr8.2:40491117-40491136 None:intergenic 40.0%
! GATTTCCTTGTTGGCTGTAT+GGG - chr8.2:40491373-40491392 MS.gene25418:CDS 40.0%
! TGATTTCCTTGTTGGCTGTA+TGG - chr8.2:40491372-40491391 MS.gene25418:CDS 40.0%
!!! GTTTTTAGTCTCCGACATCT+AGG + chr8.2:40489834-40489853 None:intergenic 40.0%
AAAAATCACCGCTGAGGATG+AGG - chr8.2:40490162-40490181 MS.gene25418:intron 45.0%
AAATAGGGAAGTTGTGGCAG+AGG + chr8.2:40492136-40492155 None:intergenic 45.0%
AATAGGGAAGTTGTGGCAGA+GGG + chr8.2:40492135-40492154 None:intergenic 45.0%
ACATTGTCCTTGACCACACA+TGG + chr8.2:40491899-40491918 None:intergenic 45.0%
ACCTAACCCATCCCAAAAAG+AGG + chr8.2:40491985-40492004 None:intergenic 45.0%
AGAACTACCATGTGTGGTCA+AGG - chr8.2:40491889-40491908 MS.gene25418:intron 45.0%
AGAGAATACGAGTGCCCATT+AGG + chr8.2:40491307-40491326 None:intergenic 45.0%
AGAGTGCAAAATAGCTCCGA+TGG + chr8.2:40491749-40491768 None:intergenic 45.0%
ATTGTTACCTGAGGGAGACA+AGG + chr8.2:40489171-40489190 None:intergenic 45.0%
CAACAGGGTGTGGAGATTTA+TGG - chr8.2:40492844-40492863 MS.gene25418:CDS 45.0%
CATGGTAGTTCTCTCTGATC+AGG + chr8.2:40491881-40491900 None:intergenic 45.0%
CCACGTGTCAATTGAGTATG+CGG + chr8.2:40489044-40489063 None:intergenic 45.0%
CTGCTCCATTCTCGAAAATC+TGG - chr8.2:40490078-40490097 MS.gene25418:intron 45.0%
CTTAATCGGACAAGCAGTTG+AGG + chr8.2:40492891-40492910 None:intergenic 45.0%
GAGGTTAAAAATCACCGCTG+AGG - chr8.2:40490156-40490175 MS.gene25418:intron 45.0%
GCATCCACGAGAATTGATCA+TGG + chr8.2:40491855-40491874 None:intergenic 45.0%
GCGAGAGAGAAGGATATTCA+CGG + chr8.2:40490059-40490078 None:intergenic 45.0%
GGAAGATGGCACCCAAATTA+TGG + chr8.2:40490131-40490150 None:intergenic 45.0%
GGGATCGGTATTCGGTTATT+TGG + chr8.2:40492115-40492134 None:intergenic 45.0%
GTACAAGCAGTGGCTATTTG+CGG - chr8.2:40490491-40490510 MS.gene25418:intron 45.0%
GTGATCATGACAGACTAAGG+GGG - chr8.2:40492453-40492472 MS.gene25418:intron 45.0%
GTTAGTTGTCCATTGTTGCC+AGG - chr8.2:40490714-40490733 MS.gene25418:intron 45.0%
TAGCTCCGATGGTCATCTAT+TGG + chr8.2:40491738-40491757 None:intergenic 45.0%
TCAATTGAGTATGCGGCGAA+GGG + chr8.2:40489037-40489056 None:intergenic 45.0%
TCAGAGAGAACTACCATGTG+TGG - chr8.2:40491883-40491902 MS.gene25418:intron 45.0%
TCGCTTGAAATAGATGCACC+TGG - chr8.2:40490193-40490212 MS.gene25418:intron 45.0%
TGTTCGTTGAATTCGTCGTC+GGG + chr8.2:40488914-40488933 None:intergenic 45.0%
TTCAACCACTCCTTCCGTTT+CGG + chr8.2:40490946-40490965 None:intergenic 45.0%
TTGTGACATTCTTATCGGGC+GGG - chr8.2:40492758-40492777 MS.gene25418:CDS 45.0%
! CAGCAAGAGAAGAGTGTAAG+AGG + chr8.2:40489142-40489161 None:intergenic 45.0%
! CTACTGACGGATCTAAAGCA+TGG + chr8.2:40492014-40492033 None:intergenic 45.0%
! CTTTTGCCATGTACAAGCAG+TGG - chr8.2:40490481-40490500 MS.gene25418:intron 45.0%
! GCAGCGTGCATTTAAAACCA+AGG + chr8.2:40491118-40491137 None:intergenic 45.0%
!! GAGGACAGTGTTGACGAAAA+CGG + chr8.2:40488951-40488970 None:intergenic 45.0%
!!! GTGTGCGTGTGTTTTTTGCT+TGG - chr8.2:40490682-40490701 MS.gene25418:intron 45.0%
!!! TCCTCTTTTTGGGATGGGTT+AGG - chr8.2:40491981-40492000 MS.gene25418:intron 45.0%
AAAAGAGGACCAGCTGGTGT+AGG + chr8.2:40491970-40491989 None:intergenic 50.0%
ACCAACGAGTACACCTACCA+AGG - chr8.2:40488887-40488906 MS.gene25418:CDS 50.0%
ACCTTGGTAGGTGTACTCGT+TGG + chr8.2:40488891-40488910 None:intergenic 50.0%
ACGTGGATCAGTACTGCCAT+TGG - chr8.2:40489058-40489077 MS.gene25418:intron 50.0%
AGAAATTCACCCGAGTCGGT+GGG + chr8.2:40489302-40489321 None:intergenic 50.0%
AGACGTCGAGAGTCTTCCAA+AGG + chr8.2:40488850-40488869 None:intergenic 50.0%
AGATGTGATCGCAGGAGAGA+CGG + chr8.2:40489006-40489025 None:intergenic 50.0%
AGCAGTTGAGGACCTCCAAA+AGG + chr8.2:40492879-40492898 None:intergenic 50.0%
AGTCGCTAGACCAACCGAAA+CGG - chr8.2:40490929-40490948 MS.gene25418:intron 50.0%
ATCCCAAAAAGAGGACCAGC+TGG + chr8.2:40491976-40491995 None:intergenic 50.0%
CAATTGAGTATGCGGCGAAG+GGG + chr8.2:40489036-40489055 None:intergenic 50.0%
CCGCATACTCAATTGACACG+TGG - chr8.2:40489041-40489060 MS.gene25418:intron 50.0%
CGAGAGTCTTCCAAAGGTTG+CGG + chr8.2:40488844-40488863 None:intergenic 50.0%
CGGTGAGAGTTCACACCTTA+AGG + chr8.2:40491033-40491052 None:intergenic 50.0%
CTCACTATCTTCTCTGCCGA+CGG - chr8.2:40489103-40489122 MS.gene25418:intron 50.0%
CTCGTAAATGCCGCAACCTT+TGG - chr8.2:40488831-40488850 MS.gene25418:CDS 50.0%
GCTCGGAGGAGATTGAGTAA+AGG + chr8.2:40490340-40490359 None:intergenic 50.0%
GCTTGTCCGATTAAGCTGTG+AGG - chr8.2:40492896-40492915 MS.gene25418:CDS 50.0%
GGCTAGAAATTCACCCGAGT+CGG + chr8.2:40489306-40489325 None:intergenic 50.0%
GTCAATTGAGTATGCGGCGA+AGG + chr8.2:40489038-40489057 None:intergenic 50.0%
GTTTAAGTCCGGAGAGAGCT+CGG + chr8.2:40490357-40490376 None:intergenic 50.0%
TAGAAATTCACCCGAGTCGG+TGG + chr8.2:40489303-40489322 None:intergenic 50.0%
TGTGACATTCTTATCGGGCG+GGG - chr8.2:40492759-40492778 MS.gene25418:CDS 50.0%
TTCCTCCCATACAGCCAACA+AGG + chr8.2:40491381-40491400 None:intergenic 50.0%
! ACACCAGCTGGTCCTCTTTT+TGG - chr8.2:40491970-40491989 MS.gene25418:intron 50.0%
! ACTTCGGGGGTATGGACTTA+TGG + chr8.2:40491174-40491193 None:intergenic 50.0%
! AGGCTAAGGTACTTGAGACC+AGG + chr8.2:40490214-40490233 None:intergenic 50.0%
! CACCAGCTGGTCCTCTTTTT+GGG - chr8.2:40491971-40491990 MS.gene25418:intron 50.0%
! TTCCTTGTTGGCTGTATGGG+AGG - chr8.2:40491376-40491395 MS.gene25418:CDS 50.0%
!! AGCTGGTCCTCTTTTTGGGA+TGG - chr8.2:40491975-40491994 MS.gene25418:intron 50.0%
!! GCAACTACTAGAGTACCGCT+TGG - chr8.2:40490024-40490043 MS.gene25418:intron 50.0%
!! TGTACTCGTTGGTGTTGTCG+TGG + chr8.2:40488880-40488899 None:intergenic 50.0%
!!! GCTGGTCCTCTTTTTGGGAT+GGG - chr8.2:40491976-40491995 MS.gene25418:intron 50.0%
AATCTCCTCCGAGCTCTCTC+CGG - chr8.2:40490346-40490365 MS.gene25418:intron 55.0%
ACCAACCGAAACGGAAGGAG+TGG - chr8.2:40490938-40490957 MS.gene25418:CDS 55.0%
ACCACTCCTTCCGTTTCGGT+TGG + chr8.2:40490942-40490961 None:intergenic 55.0%
AGCTCCAACCTCATCCTCAG+CGG + chr8.2:40490173-40490192 None:intergenic 55.0%
AGTTGCAGCGCCTTCAGTGA+CGG + chr8.2:40490010-40490029 None:intergenic 55.0%
ATCACCGCTGAGGATGAGGT+TGG - chr8.2:40490166-40490185 MS.gene25418:intron 55.0%
CTCTTCAAGGTGGGGTCCAA+TGG + chr8.2:40489077-40489096 None:intergenic 55.0%
GAAATTCACCCGAGTCGGTG+GGG + chr8.2:40489301-40489320 None:intergenic 55.0%
GAATGGAGCAGCGAGAGAGA+AGG + chr8.2:40490069-40490088 None:intergenic 55.0%
GCTAGACCAACCGAAACGGA+AGG - chr8.2:40490933-40490952 MS.gene25418:intron 55.0%
GCTCTAACCTTGTCTCCCTC+AGG - chr8.2:40489161-40489180 MS.gene25418:intron 55.0%
GGAAGTTGTGGCAGAGGGAT+CGG + chr8.2:40492130-40492149 None:intergenic 55.0%
GTGACATTCTTATCGGGCGG+GGG - chr8.2:40492760-40492779 MS.gene25418:CDS 55.0%
GTGCAAGTTCCCAACAGCAG+CGG + chr8.2:40490260-40490279 None:intergenic 55.0%
GTGGCAGAGGGATCGGTATT+CGG + chr8.2:40492123-40492142 None:intergenic 55.0%
TACGAATGACGCGTGAGCGA+CGG + chr8.2:40488979-40488998 None:intergenic 55.0%
TCTGCAATGCCGCTGCTGTT+GGG - chr8.2:40490248-40490267 MS.gene25418:intron 55.0%
TGAATTCGTCGTCGGGACCT+TGG + chr8.2:40488907-40488926 None:intergenic 55.0%
TGCGGCATTTACGAGAGACG+AGG + chr8.2:40488826-40488845 None:intergenic 55.0%
TGGTCGGGTGCAGCGTAATA+TGG - chr8.2:40492794-40492813 MS.gene25418:CDS 55.0%
TGGTGAGCTGCATCGCCTTA+AGG - chr8.2:40491015-40491034 MS.gene25418:intron 55.0%
TGTTGGGAACTTGCACAGCG+TGG - chr8.2:40490264-40490283 MS.gene25418:intron 55.0%
TTCTGCAATGCCGCTGCTGT+TGG - chr8.2:40490247-40490266 MS.gene25418:intron 55.0%
! GGGTGCCATCTTCCTTGAAG+AGG - chr8.2:40490137-40490156 MS.gene25418:intron 55.0%
! GTAAGAGATCCCCACCGACT+CGG - chr8.2:40489289-40489308 MS.gene25418:intron 55.0%
!! TAAGAGATCCCCACCGACTC+GGG - chr8.2:40489290-40489309 MS.gene25418:intron 55.0%
CTTCACCAGCCTACACCAGC+TGG - chr8.2:40491958-40491977 MS.gene25418:intron 60.0%
GGGGGTCTCTTGCTACTGGT+CGG - chr8.2:40492778-40492797 MS.gene25418:CDS 60.0%
GGGGTCTCTTGCTACTGGTC+GGG - chr8.2:40492779-40492798 MS.gene25418:CDS 60.0%
GTCGGGGTAGATGTGATCGC+AGG + chr8.2:40489014-40489033 None:intergenic 60.0%
TAAGTCCGGAGAGAGCTCGG+AGG + chr8.2:40490354-40490373 None:intergenic 60.0%
TGAGTATGCGGCGAAGGGGT+CGG + chr8.2:40489032-40489051 None:intergenic 60.0%
TGGCACATGGCAGATCCCCT+TGG + chr8.2:40490985-40491004 None:intergenic 60.0%
TTCGTCGTCGGGACCTTGGT+AGG + chr8.2:40488903-40488922 None:intergenic 60.0%
AGTATGCGGCGAAGGGGTCG+GGG + chr8.2:40489030-40489049 None:intergenic 65.0%
GAGGACCAGCTGGTGTAGGC+TGG + chr8.2:40491966-40491985 None:intergenic 65.0%
GAGTATGCGGCGAAGGGGTC+GGG + chr8.2:40489031-40489050 None:intergenic 65.0%
GGGCGGGGGTCTCTTGCTAC+TGG - chr8.2:40492774-40492793 MS.gene25418:CDS 70.0%
CGCGTGAGCGACGGAGAGCG+AGG + chr8.2:40488970-40488989 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 40488818 40492926 40488818 ID=MS.gene25418
chr8.2 mRNA 40488818 40492926 40488818 ID=MS.gene25418.t1;Parent=MS.gene25418
chr8.2 exon 40492562 40492926 40492562 ID=MS.gene25418.t1.exon1;Parent=MS.gene25418.t1
chr8.2 CDS 40492562 40492926 40492562 ID=cds.MS.gene25418.t1;Parent=MS.gene25418.t1
chr8.2 exon 40491339 40491789 40491339 ID=MS.gene25418.t1.exon2;Parent=MS.gene25418.t1
chr8.2 CDS 40491339 40491789 40491339 ID=cds.MS.gene25418.t1;Parent=MS.gene25418.t1
chr8.2 exon 40491091 40491243 40491091 ID=MS.gene25418.t1.exon3;Parent=MS.gene25418.t1
chr8.2 CDS 40491091 40491243 40491091 ID=cds.MS.gene25418.t1;Parent=MS.gene25418.t1
chr8.2 exon 40490937 40491008 40490937 ID=MS.gene25418.t1.exon4;Parent=MS.gene25418.t1
chr8.2 CDS 40490937 40491008 40490937 ID=cds.MS.gene25418.t1;Parent=MS.gene25418.t1
chr8.2 exon 40488818 40488937 40488818 ID=MS.gene25418.t1.exon5;Parent=MS.gene25418.t1
chr8.2 CDS 40488818 40488937 40488818 ID=cds.MS.gene25418.t1;Parent=MS.gene25418.t1
Gene Sequence

>MS.gene25418

ATGAGCCTCGTCTCTCGTAAATGCCGCAACCTTTGGAAGACTCTCGACGTCTTCGATTTCCACGACAACACCAACGAGTACACCTACCAAGGTCCCGACGACGAATTCAACGAACAATTCATGTCGTTCACCGTTTTCGTCAACACTGTCCTCGCTCTCCGTCGCTCACGCGTCATTCGTAAGTTCCGTCTCTCCTGCGATCACATCTACCCCGACCCCTTCGCCGCATACTCAATTGACACGTGGATCAGTACTGCCATTGGACCCCACCTTGAAGAGTTTCATCTCACTATCTTCTCTGCCGACGGTTTCAATAATCTGCCTCTTACACTCTTCTCTTGCTGCTCTAACCTTGTCTCCCTCAGGTAACAATTCCTTTCATCCTCTTTTGTTTTATTTTTTTGTTTACTACATTTCATTTCAAAATTTGTTTCTGTAAGCTTAACTGAGTTGATAAGGACATTGTAGTAGGTAAGAGATCCCCACCGACTCGGGTGAATTTCTAGCCACTTGAGAAAAACAAAGTATGTTTGTGAAATTTTGTGTTGTTTTTAGGTTTAAATATGCAAATGATCCATACAAATATCAAGCTTTTTGGTTTTAGTAATTGTAATTTTTTTTTCTTTTTTGGTTTTAGTGTTTGCAAACATAGAATTTTTTGCTTTTGGTCCTTGTTGTTATGTTTTAGTGCTTACAAAATTGATTCATATTGGATTTGGTCTTTGGTTGGTAGAACTCACTAACCACTTGAGCTTAATTGTTTGGTTTGATTCATATTGGATTTGGTCCTAGTGTGTAAAATATTTTATTTTAGTCCTTCAAAGTGAGTATTATAGGACAATTTCAATATGAATTGATTATATATTTGCAAGGACTGAAACCAAAAAAGTATTTTTACAGGAACTAAAACCAAAAGGTTTGATATTTACAAGGATCATTTGCTTATTTAAGCCTAATTTTGTATGTTTAGTACTTTCATTTTCTACAAATTATGCAACTGTTTGCTTTTAATCCCTAGATGTCGGAGACTAAAAACATATTTAACCACAATTATTTTGCTTAGTTTAGCTATTCTGATTTAATATAGATGCGAAATGATATAAGATGATAACGTAACATTCATGTAATTTACCTCAGTCTCAATGGCTATATCTTGCTGCAATTGCAAGAATCTTCGGTATTTTGCTTACCGTCACTGAAGGCGCTGCAACTACTAGAGTACCGCTTGGATTTGAATTCCGTGAATATCCTTCTCTCTCGCTGCTCCATTCTCGAAAATCTGGAAATTTCATTTAGTCCTGAATCTTTGGCCATAATTTGGGTGCCATCTTCCTTGAAGAGGTTAAAAATCACCGCTGAGGATGAGGTTGGAGCTTCGCTTGAAATAGATGCACCTGGTCTCAAGTACCTTAGCCTCAAACGTATCACATTCTGCAATGCCGCTGCTGTTGGGAACTTGCACAGCGTGGAAGAAGCATATCTCGATGTATTTTCCACTCCTGAAAGTGAATCTGTTGAACCTTTACTCAATCTCCTCCGAGCTCTCTCCGGACTTAAACATCTAGAGCTACAAAGGTTAACCACAAAGGTGACTGAAGTTTTCATTATTTCTAATATATGTAATTTTGTATTAATAATTATTAAACAGTTAGTTAATCACTTGCTTTTGCCATGTACAAGCAGTGGCTATTTGCGGCCCCTGTTTTAGATTTTCCAGAATTTCGTTATTTGCTTCATCTACAGCTCGGACTTCTCTCTTTCAATGCAACTTTTCTGTTCGACATGCTTCAAAAATGTCCTATGCTACAATCTCTCACAACATATCTGTTCATAAAGGTTTGTCCAGTTTAACTAAAGCTTTAGTGTGTGCGTGTGTTTTTTGCTTGGAACTTATATGTTAGTTGTCCATTGTTGCCAGGAAAATCCATCGTATGATTCATCACCTTCATATAGATTGGAGGCAAAGCCTAAAAGTGTTCCTAAATGCCTCGTATCCCATTTGACCTTTATTCGCTTTCAAGGATATATAGGAAATGAGCTGGAATTTATTGGGTATGTTTTGCAAAATGGACTTGTTTTGAAGACAATGATTATTTATGAATATTGGCTAAAGTCGCTAGACCAACCGAAACGGAAGGAGTGGTTGAAAAAAATTTCTGATCTACCAAGGGGATCTGCCATGTGCCAAGTTAAATTTTGGTGAGCTGCATCGCCTTAAGGTGTGAACTCTCACCGTCTTTATTCTATGTTGCTTACTATATCAAAAATGATATTGTAAGTCTGCACAATTAGATTTCCCTTGGTTTTAAATGCACGCTGCCAAATTTTAAACTATATTGTTTGTGGTGGAGTTCCATAAGTCCATACCCCCGAAGTATCTAAATTTGTTTATCTATTTATTTTCTGATAGATAAACCTGAGGAGTTATGTTCAATATAGTCCTAACTAGGGAGTTGCTAGATTAGGTGAGACTAGACTCTCGAATTCCTAATGGGCACTCGTATTCTCTTCATCCGTCTCTTTGTAATTCCTAAACTCAATTTGTTGTTGTAAGTGATTTCCTTGTTGGCTGTATGGGAGGAAACAATGCATCATGCATATATAATAGAAGCATGAATTAGTGTGAGTGAGAGAAAATACAGGTTGGAATTTGGTTAGAATTATGGGAAATATTTAAAGATCAGCCCTGCAATGGATCTACTTGTAGTGGTGCCCATCACTTTGTTGACATTCCTTCCTAACATAGATTATCACGGGGATAGTGAGTAGCAGCTTATTGCTCAACACATATTATTTGATACATATATAATTTTGTTACTTTTCAATCGTTAGTGAGATGTTAGCTATTAAAATACAATTTCCGTTTTTTGTAGTTGGCTATTAGTAGCAATTCTTTATATAAGTAGTGTAATGTACTCCAATAGATGACCATCGGAGCTATTTTGCACTCTCACATCGTGTGATTTTTGTTCTTCTATTTAAGTCTAGCTTCTAGCCCACACTTCTTAGTTCTTATTACACCCCTAATGAGAATCCATGATCAATTCTCGTGGATGCTCTCCTGATCAGAGAGAACTACCATGTGTGGTCAAGGACAATGTAATTGACATTAGAACAAGATGCAGTTTATTGATAACAATCTTCACCAGCCTACACCAGCTGGTCCTCTTTTTGGGATGGGTTAGGTGTAATACCATGCTTTAGATCCGTCAGTAGCACAAAGTTTGCTTGCTTAGAATGTCATTTTTAATTAAGTAATTGATAGAAATGGTCGCTCCCTACCAATCCTTTATCCCAAATAACCGAATACCGATCCCTCTGCCACAACTTCCCTATTTATTACAATTCATAAAACACATAATAAAAACTGCACACATAAGCATAACTGCGACAAATCTGACCAAAGTCTGTTTTGGTCTTCTCTGCCCCTTCTCATATAATTCCTTAATTAGACGTCTAACAGTAGTCTATGCCATTCAGCTATTTATTAGCTTTTGTTGTAAGAGAGTAATCAACCAATTCATGCAAATTTTGAGTACAAAGTTCACTCAAATAGATGTTTCATTTAAAACTAGTATAGCTATTGTGCTTTCCAATTAAAATATGAGATATATTGTGACTTGTGAAATACAACTGTGATCATGACAGACTAAGGGGGAATATAATTGGTCATGACAGACTAAGAGGGAATATAATTGGTTAAAGGTAAGAAGGAATGAATGAATGTGAGACATATCAATCTCAAATTCTAACACTTCCATAATACTTGACAATAGAAACGTATGTAGAAGGGTAGTTTTGAGGCTTTTAATTACGAAATATTTTTCATATGTTAACTGTAAAAAAGTTTGTGTAGGATCTGTATATATATTAATTTAGAAGTCTTGTCATTTGACAAAAAAAAAATTAAGGACGTTTTTCCTAAGGTCTCAATACATGTTTGTGACATTCTTATCGGGCGGGGGTCTCTTGCTACTGGTCGGGTGCAGCGTAATATGGTTAGAGCTATCAAAGGTATATTTAGAGCAACAGGGTGTGGAGATTTATGGTTTTATCAACCTTTTGGAGGTCCTCAACTGCTTGTCCGATTAAGCTGTGAGGTCTTTTGA
Protein sequence

>MS.gene25418.t1

MSLVSRKCRNLWKTLDVFDFHDNTNEYTYQGPDDEFNEQFMSFTVFVNTVLALRRSRVIRKFRLSCDHIYPDPFAAYSIDTWISTAIGPHLEEFHLTIFSADGFNNLPLTLFSCCSNLVSLSLNGYILLQLQESSVFCLPSLKALQLLEYRLDLNSVNILLSRCSILENLEISFSPESLAIIWVPSSLKRLKITAEDEVGASLEIDAPGLKYLSLKRITFCNAAAVGNLHSVEEAYLDVFSTPESESVEPLLNLLRALSGLKHLELQRLTTKWLFAAPVLDFPEFRYLLHLQLGLLSFNATFLFDMLQKCPMLQSLTTYLFIKENPSYDSSPSYRLEAKPKSVPKCLRNMVRAIKGIFRATGCGDLWFYQPFGGPQLLVRLSCEVF