AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63223


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63223.t1 MTR_8g468760 80.952 357 37 2 1 357 1 326 0.0 543
MS.gene63223.t1 MTR_8g062270 74.571 350 87 2 6 354 13 361 0.0 517
MS.gene63223.t1 MTR_5g092960 66.574 359 106 6 4 352 14 368 2.65e-143 412
MS.gene63223.t1 MTR_5g092960 66.574 359 106 6 4 352 14 368 1.25e-142 412
MS.gene63223.t1 MTR_8g468840 64.722 360 115 5 1 352 1 356 3.54e-141 408
MS.gene63223.t1 MTR_4g032730 60.857 350 124 7 4 349 10 350 1.75e-128 376
MS.gene63223.t1 MTR_8g467800 60.784 357 122 8 2 352 12 356 2.48e-123 363
MS.gene63223.t1 MTR_2g083840 57.955 352 137 4 2 349 14 358 4.79e-118 349
MS.gene63223.t1 MTR_8g468810 54.918 366 141 9 2 352 12 368 1.83e-116 342
MS.gene63223.t1 MTR_8g468810 54.278 374 147 9 2 360 12 376 1.62e-115 343
MS.gene63223.t1 MTR_8g058970 53.316 377 139 11 2 349 11 379 5.45e-104 314
MS.gene63223.t1 MTR_8g468810 57.237 304 114 6 2 297 12 307 1.26e-102 305
MS.gene63223.t1 MTR_8g468810 56.908 304 115 6 2 297 12 307 1.95e-102 305
MS.gene63223.t1 MTR_8g468810 56.908 304 115 6 2 297 12 307 3.31e-102 305
MS.gene63223.t1 MTR_8g467800 60.645 310 104 8 2 305 12 309 3.88e-99 297
MS.gene63223.t1 MTR_8g445780 47.175 354 165 9 2 349 6 343 1.14e-85 265
MS.gene63223.t1 MTR_4g050250 44.054 370 181 10 2 349 12 377 2.88e-76 241
MS.gene63223.t1 MTR_8g058965 43.902 369 174 11 2 349 4 360 3.90e-71 229
MS.gene63223.t1 MTR_8g014260 43.056 360 180 12 1 349 12 357 2.99e-68 221
MS.gene63223.t1 MTR_8g070950 42.817 355 168 9 2 349 12 338 2.38e-66 216
MS.gene63223.t1 MTR_8g469020 40.223 358 188 8 9 349 7 355 1.18e-65 215
MS.gene63223.t1 MTR_8g062080 41.761 352 169 10 9 349 23 349 4.51e-63 208
MS.gene63223.t1 MTR_8g062310 41.246 337 163 9 8 343 24 326 3.04e-62 205
MS.gene63223.t1 MTR_8g014160 42.308 312 165 10 1 305 35 338 1.83e-55 187
MS.gene63223.t1 MTR_8g062010 39.888 356 185 10 1 349 1 334 2.42e-55 187
MS.gene63223.t1 MTR_8g467790 36.000 350 173 10 8 349 147 453 5.41e-49 172
MS.gene63223.t1 MTR_8g062300 35.677 384 184 12 5 349 22 381 1.78e-48 170
MS.gene63223.t1 MTR_8g077460 42.308 234 122 6 2 229 3 229 1.77e-42 152
MS.gene63223.t1 MTR_5g021550 49.045 157 68 6 2 154 14 162 7.49e-37 131
MS.gene63223.t1 MTR_8g014290 44.654 159 82 5 2 155 3 160 3.63e-32 119
MS.gene63223.t1 MTR_4g024710 40.952 210 118 5 155 360 58 265 1.94e-31 122
MS.gene63223.t1 MTR_8g014210 51.825 137 64 2 217 352 6 141 4.05e-31 118
MS.gene63223.t1 MTR_4g024745 42.289 201 110 5 153 349 10 208 9.85e-28 110
MS.gene63223.t1 MTR_5g084070 29.477 363 203 13 3 349 7 332 1.13e-24 104
MS.gene63223.t1 MTR_4g024720 41.860 172 72 7 3 154 13 176 1.54e-24 99.8
MS.gene63223.t1 MTR_5g080710 30.769 351 210 13 8 349 32 358 1.32e-22 99.0
MS.gene63223.t1 MTR_4g056070 28.607 402 220 15 1 351 1 386 2.46e-19 89.4
MS.gene63223.t1 MTR_4g056040 30.905 398 212 19 1 356 1 377 3.99e-19 89.0
MS.gene63223.t1 MTR_7g032380 33.831 201 111 6 8 204 10 192 4.30e-19 87.8
MS.gene63223.t1 MTR_6g022500 28.249 354 185 15 2 350 94 383 6.50e-18 85.1
MS.gene63223.t1 MTR_1089s0010 27.143 350 180 15 3 347 2 281 8.66e-18 84.3
MS.gene63223.t1 MTR_8g085430 29.151 271 149 8 2 261 4 242 9.99e-18 83.6
MS.gene63223.t1 MTR_4g113810 39.877 163 91 5 96 253 2 162 1.06e-17 80.1
MS.gene63223.t1 MTR_8g014220 35.644 202 71 7 3 199 13 160 1.27e-17 79.7
MS.gene63223.t1 MTR_1g041245 31.527 203 113 7 8 204 10 192 3.38e-17 82.4
MS.gene63223.t1 MTR_1g090900 33.516 182 97 5 3 180 5 166 3.62e-17 79.3
MS.gene63223.t1 MTR_4g093690 34.574 188 98 7 5 188 14 180 4.15e-17 80.9
MS.gene63223.t1 MTR_1g085120 29.316 307 154 17 9 299 179 438 9.76e-17 81.6
MS.gene63223.t1 MTR_1g085120 29.316 307 154 17 9 299 92 351 1.08e-16 81.6
MS.gene63223.t1 MTR_1g085120 29.316 307 154 17 9 299 167 426 1.22e-16 81.6
MS.gene63223.t1 MTR_6g045333 30.841 214 124 9 8 214 60 256 1.38e-16 80.9
MS.gene63223.t1 MTR_2g007450 27.596 366 192 15 8 352 15 328 1.93e-16 80.5
MS.gene63223.t1 MTR_4g056020 29.255 376 223 14 1 357 1 352 2.35e-16 80.5
MS.gene63223.t1 MTR_6g022360 32.843 204 105 6 4 204 38 212 2.40e-16 80.1
MS.gene63223.t1 MTR_5g058100 27.654 358 182 13 1 349 1 290 5.06e-16 79.0
MS.gene63223.t1 MTR_6g040270 29.189 370 209 18 11 356 10 350 1.84e-15 77.4
MS.gene63223.t1 MTR_2g086020 38.816 152 73 4 34 180 1 137 3.73e-15 75.9
MS.gene63223.t1 MTR_4g055990 26.866 402 234 15 1 356 1 388 3.80e-15 77.0
MS.gene63223.t1 MTR_4g055990 27.157 394 227 15 9 356 9 388 5.40e-15 76.3
MS.gene63223.t1 MTR_7g026500 33.014 209 108 8 9 204 14 203 5.58e-15 75.9
MS.gene63223.t1 MTR_6g011460 32.701 211 117 9 3 207 40 231 9.46e-15 75.5
MS.gene63223.t1 MTR_4g056030 29.268 328 195 13 1 314 1 305 9.94e-15 75.5
MS.gene63223.t1 MTR_3g107100 30.542 203 124 7 4 204 6 193 1.40e-14 74.7
MS.gene63223.t1 MTR_7g055943 29.557 203 124 5 4 203 35 221 1.85e-14 74.7
MS.gene63223.t1 MTR_2g036470 27.147 361 189 15 1 349 1 299 2.63e-14 73.9
MS.gene63223.t1 MTR_4g080787 27.824 363 233 14 6 349 18 370 3.63e-14 73.9
MS.gene63223.t1 MTR_3g108150 33.333 216 103 9 9 211 13 200 6.39e-14 72.8
MS.gene63223.t1 MTR_2g005990 28.571 210 128 8 8 206 5 203 6.80e-14 72.8
MS.gene63223.t1 MTR_5g073420 30.622 209 129 8 8 213 10 205 7.23e-14 72.4
MS.gene63223.t1 MTR_3g036250 29.146 199 123 7 9 204 5 188 8.03e-14 72.4
MS.gene63223.t1 MTR_4g080773 28.108 370 237 17 1 349 12 373 9.47e-14 72.8
MS.gene63223.t1 MTR_4g080773 28.108 370 237 17 1 349 12 373 1.04e-13 72.4
MS.gene63223.t1 MTR_1g013840 32.821 195 114 7 9 197 56 239 2.32e-13 71.2
MS.gene63223.t1 MTR_2g007500 31.401 207 103 8 8 206 13 188 4.94e-13 69.7
MS.gene63223.t1 MTR_1g090883 27.493 371 228 13 5 357 15 362 6.64e-13 69.7
MS.gene63223.t1 MTR_5g058000 32.547 212 116 9 3 208 2 192 8.98e-13 69.3
MS.gene63223.t1 MTR_7g056447 32.864 213 103 9 1 201 1 185 1.02e-12 68.2
MS.gene63223.t1 MTR_1g016340 31.658 199 128 6 9 205 15 207 1.12e-12 69.3
MS.gene63223.t1 MTR_1g016340 31.658 199 128 6 9 205 20 212 1.14e-12 69.3
MS.gene63223.t1 MTR_5g008920 28.346 254 139 9 6 255 9 223 1.78e-12 68.2
MS.gene63223.t1 MTR_7g034110 30.049 203 120 6 7 204 9 194 1.81e-12 68.2
MS.gene63223.t1 MTR_2g008320 26.629 353 184 17 8 352 51 336 2.04e-12 68.6
MS.gene63223.t1 MTR_3g040700 27.136 199 127 7 9 204 43 226 2.31e-12 68.2
MS.gene63223.t1 MTR_5g061680 32.500 200 117 8 8 204 10 194 3.53e-12 67.0
MS.gene63223.t1 MTR_7g115270 28.505 214 117 8 9 207 12 204 4.36e-12 67.4
MS.gene63223.t1 MTR_7g034115 29.808 208 124 7 8 211 10 199 1.13e-11 65.9
MS.gene63223.t1 MTR_3g114200 48.148 54 28 0 4 57 14 67 1.62e-11 62.4
MS.gene63223.t1 MTR_7g033945 30.769 182 99 7 7 180 9 171 2.03e-11 62.8
MS.gene63223.t1 MTR_1g021820 29.104 268 140 10 5 262 24 251 2.17e-11 65.1
MS.gene63223.t1 MTR_7g068570 29.605 152 91 5 7 157 3 139 2.78e-11 62.4
MS.gene63223.t1 MTR_5g045510 28.856 201 120 8 8 204 11 192 2.85e-11 64.7
MS.gene63223.t1 MTR_4g098590 31.401 207 118 9 11 206 1 194 4.41e-11 63.9
MS.gene63223.t1 MTR_7g075820 26.712 292 177 11 9 273 6 287 6.34e-11 63.5
MS.gene63223.t1 MTR_1g108820 31.373 204 116 10 3 203 2 184 7.05e-11 63.2
MS.gene63223.t1 MTR_7g033990 30.435 207 121 7 8 208 10 199 7.85e-11 63.5
MS.gene63223.t1 MTR_1g066830 29.577 213 110 11 8 207 7 192 7.96e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63223.t1 AT1G06630 29.609 358 229 10 9 358 12 354 7.87e-25 103
MS.gene63223.t1 AT1G06630 29.609 358 229 10 9 358 12 354 7.87e-25 103
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 12 349 3.36e-24 102
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 12 349 3.36e-24 102
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 12 349 3.36e-24 102
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 12 349 3.36e-24 102
MS.gene63223.t1 AT1G78750 28.962 366 226 14 7 351 16 368 3.39e-24 103
MS.gene63223.t1 AT1G78750 28.962 366 226 14 7 351 16 368 3.39e-24 103
MS.gene63223.t1 AT5G53840 29.167 360 214 13 4 350 13 344 3.69e-24 103
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 21 358 3.98e-24 102
MS.gene63223.t1 AT1G16930 33.725 255 143 11 1 248 7 242 1.60e-23 101
MS.gene63223.t1 AT1G16930 33.725 255 143 11 1 248 7 242 1.60e-23 101
MS.gene63223.t1 AT1G16930 33.725 255 143 11 1 248 7 242 1.60e-23 101
MS.gene63223.t1 AT1G06630 29.513 349 227 9 9 349 12 349 1.63e-23 101
MS.gene63223.t1 AT1G06630 30.303 297 194 7 9 303 12 297 3.78e-23 98.6
MS.gene63223.t1 AT1G69630 28.954 373 214 16 5 351 14 361 2.35e-22 98.2
MS.gene63223.t1 AT4G14096 33.824 272 155 12 9 272 8 262 2.61e-22 98.2
MS.gene63223.t1 AT4G14096 33.824 272 155 12 9 272 8 262 2.61e-22 98.2
MS.gene63223.t1 AT1G66310 28.729 362 229 12 2 351 12 356 4.58e-22 97.1
MS.gene63223.t1 AT4G10400 29.474 380 209 19 8 356 1 352 3.22e-20 91.7
MS.gene63223.t1 AT4G10400 29.474 380 209 19 8 356 1 352 3.22e-20 91.7
MS.gene63223.t1 AT4G10400 29.474 380 209 19 8 356 1 352 3.22e-20 91.7
MS.gene63223.t1 AT5G38590 29.097 299 179 13 8 299 1 273 3.61e-20 89.7
MS.gene63223.t1 AT5G56410 28.344 314 182 10 8 299 1 293 5.12e-20 91.7
MS.gene63223.t1 AT4G26340 29.345 351 208 15 8 349 1 320 5.24e-20 90.9
MS.gene63223.t1 AT4G14103 32.472 271 162 11 9 272 8 264 6.94e-20 90.5
MS.gene63223.t1 AT4G14103 32.472 271 162 11 9 272 8 264 6.94e-20 90.5
MS.gene63223.t1 AT5G41840 25.132 378 237 13 9 349 14 382 1.02e-19 90.9
MS.gene63223.t1 AT1G13780 28.421 380 224 15 9 360 10 369 1.10e-19 90.5
MS.gene63223.t1 AT4G14103 32.472 271 162 11 9 272 8 264 1.29e-19 90.1
MS.gene63223.t1 AT5G38590 29.097 299 179 13 8 299 1 273 1.40e-19 89.7
MS.gene63223.t1 AT3G59200 28.989 376 211 17 9 349 7 361 1.44e-19 89.4
MS.gene63223.t1 AT3G58860 31.429 245 157 7 4 246 2 237 1.62e-19 89.7
MS.gene63223.t1 AT1G13780 28.657 335 194 14 9 315 10 327 2.48e-19 88.2
MS.gene63223.t1 AT5G18780 28.011 357 221 16 9 350 11 346 3.22e-19 88.2
MS.gene63223.t1 AT5G18780 28.011 357 221 16 9 350 11 346 3.22e-19 88.2
MS.gene63223.t1 AT3G58920 29.049 389 203 18 8 349 1 363 3.68e-19 89.0
MS.gene63223.t1 AT3G59200 28.989 376 211 17 9 349 7 361 5.08e-19 88.6
MS.gene63223.t1 AT5G18780 28.011 357 221 16 9 350 11 346 7.04e-19 87.8
MS.gene63223.t1 AT5G18780 28.011 357 221 16 9 350 11 346 7.04e-19 87.8
MS.gene63223.t1 AT4G09920 29.508 305 173 15 8 299 1 276 7.85e-19 86.3
MS.gene63223.t1 AT4G09920 29.508 305 173 15 8 299 1 276 7.85e-19 86.3
MS.gene63223.t1 AT4G09920 30.345 290 167 14 8 284 1 268 1.24e-18 85.5
MS.gene63223.t1 AT4G09920 30.345 290 167 14 8 284 1 268 1.24e-18 85.5
MS.gene63223.t1 AT4G09920 30.345 290 167 14 8 284 1 268 1.24e-18 85.5
MS.gene63223.t1 AT5G53635 28.134 359 215 16 11 349 2 337 1.92e-18 86.7
MS.gene63223.t1 AT2G04230 30.844 308 189 12 9 305 13 307 2.93e-18 86.3
MS.gene63223.t1 AT5G22670 27.763 371 208 17 9 350 11 350 3.36e-18 85.9
MS.gene63223.t1 AT2G26030 28.763 372 207 20 9 349 4 348 3.74e-18 85.9
MS.gene63223.t1 AT2G26030 28.763 372 207 20 9 349 4 348 3.74e-18 85.9
MS.gene63223.t1 AT2G26030 28.763 372 207 20 9 349 4 348 3.86e-18 85.9
MS.gene63223.t1 AT1G60400 27.500 360 227 14 8 353 13 352 4.13e-18 85.5
MS.gene63223.t1 AT3G42770 28.571 350 227 10 11 349 1 338 4.74e-18 85.9
MS.gene63223.t1 AT1G78760 26.374 364 221 14 9 351 16 353 4.97e-18 85.5
MS.gene63223.t1 AT3G59190 29.474 285 181 11 1 277 6 278 1.58e-17 83.6
MS.gene63223.t1 AT3G26922 30.033 303 179 13 9 300 14 294 2.07e-17 82.4
MS.gene63223.t1 AT3G26922 30.033 303 179 13 9 300 14 294 2.07e-17 82.4
MS.gene63223.t1 AT4G00160 34.800 250 131 14 9 246 16 245 2.51e-17 83.2
MS.gene63223.t1 AT5G44950 29.428 367 208 19 9 349 4 345 2.96e-17 83.2
MS.gene63223.t1 AT3G59190 29.603 277 177 10 9 277 12 278 3.43e-17 83.2
MS.gene63223.t1 AT3G44810 30.675 326 199 12 11 322 9 321 4.14e-17 82.8
MS.gene63223.t1 AT5G41630 29.808 208 135 5 1 203 4 205 7.39e-17 82.0
MS.gene63223.t1 AT4G13960 33.889 180 107 5 8 185 1 170 1.25e-16 81.3
MS.gene63223.t1 AT4G13960 33.889 180 107 5 8 185 1 170 1.25e-16 81.3
MS.gene63223.t1 AT1G66300 25.886 367 227 17 7 351 27 370 1.70e-16 80.9
MS.gene63223.t1 AT3G58900 29.866 298 168 11 8 286 1 276 1.71e-16 79.7
MS.gene63223.t1 AT3G58900 29.866 298 168 11 8 286 1 276 1.71e-16 79.7
MS.gene63223.t1 AT3G58900 29.866 298 168 11 8 286 1 276 1.71e-16 79.7
MS.gene63223.t1 AT3G58980 29.268 369 215 16 8 349 1 350 1.74e-16 81.3
MS.gene63223.t1 AT3G58940 31.621 253 153 10 8 247 1 246 1.77e-16 81.3
MS.gene63223.t1 AT3G58940 31.621 253 153 10 8 247 1 246 1.77e-16 81.3
MS.gene63223.t1 AT3G59240 28.302 371 219 15 6 350 2 351 2.69e-16 80.5
MS.gene63223.t1 AT5G44980 29.474 380 195 21 7 349 2 345 2.72e-16 80.1
MS.gene63223.t1 AT5G44980 29.474 380 195 21 7 349 2 345 2.72e-16 80.1
MS.gene63223.t1 AT4G13985 26.374 364 238 13 5 350 15 366 2.72e-16 80.1
MS.gene63223.t1 AT5G56690 27.599 279 173 12 11 277 4 265 3.02e-16 79.7
MS.gene63223.t1 AT3G58900 29.866 298 168 11 8 286 1 276 3.33e-16 80.1
MS.gene63223.t1 AT3G60040 26.190 336 221 13 9 327 13 338 7.71e-16 79.3
MS.gene63223.t1 AT5G27750 27.957 372 223 16 9 349 5 362 7.90e-16 78.2
MS.gene63223.t1 AT1G80470 24.930 357 230 15 9 349 15 349 9.05e-16 78.6
MS.gene63223.t1 AT3G60040 26.190 336 221 13 9 327 230 555 9.58e-16 79.0
MS.gene63223.t1 AT3G60040 26.190 336 221 13 9 327 232 557 9.86e-16 79.0
MS.gene63223.t1 AT5G22700 26.575 365 222 12 9 350 6 347 9.89e-16 78.6
MS.gene63223.t1 AT5G22700 26.575 365 222 12 9 350 6 347 9.89e-16 78.6
MS.gene63223.t1 AT5G22700 26.575 365 222 12 9 350 6 347 9.89e-16 78.6
MS.gene63223.t1 AT5G22700 26.575 365 222 12 9 350 6 347 9.89e-16 78.6
MS.gene63223.t1 AT5G56440 31.076 251 144 10 8 248 1 232 1.14e-15 78.2
MS.gene63223.t1 AT5G27750 27.957 372 223 16 9 349 5 362 1.19e-15 78.2
MS.gene63223.t1 AT5G22700 26.575 365 222 12 9 350 43 384 1.25e-15 78.2
MS.gene63223.t1 AT5G56420 27.356 329 196 15 9 326 6 302 1.25e-15 78.2
MS.gene63223.t1 AT5G56420 27.356 329 196 15 9 326 6 302 1.25e-15 78.2
MS.gene63223.t1 AT5G56420 27.356 329 196 15 9 326 6 302 1.25e-15 78.2
MS.gene63223.t1 AT3G60040 26.190 336 221 13 9 327 233 558 1.42e-15 78.6
MS.gene63223.t1 AT3G60040 26.190 336 221 13 9 327 232 557 1.44e-15 78.6
MS.gene63223.t1 AT1G32375 26.000 350 199 15 8 321 1 326 4.08e-15 76.6
MS.gene63223.t1 AT1G32375 26.000 350 199 15 8 321 1 326 4.08e-15 76.6
MS.gene63223.t1 AT3G62440 25.330 379 225 15 8 349 1 358 4.37e-15 76.6
MS.gene63223.t1 AT3G44060 29.836 305 170 13 14 299 4 283 4.73e-15 76.3
MS.gene63223.t1 AT4G15060 31.395 258 139 14 6 248 23 257 4.89e-15 76.3
MS.gene63223.t1 AT2G42720 29.674 337 204 15 8 327 1 321 4.99e-15 76.3
MS.gene63223.t1 AT5G38390 34.413 247 130 11 8 247 1 222 7.68e-15 75.9
MS.gene63223.t1 AT4G15060 31.518 257 138 14 7 248 170 403 1.00e-14 75.9
MS.gene63223.t1 AT3G26930 32.781 302 163 14 9 300 21 292 1.03e-14 75.5
MS.gene63223.t1 AT3G49040 27.869 305 177 10 9 300 17 291 1.21e-14 74.3
MS.gene63223.t1 AT5G22660 26.330 376 215 14 9 353 13 357 1.25e-14 75.1
MS.gene63223.t1 AT3G59170 27.243 301 178 11 9 275 7 300 2.44e-14 74.3
MS.gene63223.t1 AT5G62970 28.571 273 168 10 16 268 10 275 2.45e-14 74.3
MS.gene63223.t1 AT3G52680 30.116 259 148 10 9 254 21 259 5.68e-14 72.8
MS.gene63223.t1 AT4G13965 29.248 359 197 18 7 349 8 325 6.30e-14 72.8
MS.gene63223.t1 AT3G49150 31.429 245 150 9 9 246 16 249 6.73e-14 73.2
MS.gene63223.t1 AT5G38392 35.200 125 74 3 8 131 1 119 7.65e-14 70.5
MS.gene63223.t1 AT3G52680 30.116 259 148 10 9 254 21 259 8.01e-14 72.8
MS.gene63223.t1 AT3G58820 33.758 157 93 4 8 160 1 150 8.77e-14 72.4
MS.gene63223.t1 AT5G22730 26.064 376 225 15 9 355 28 379 8.81e-14 72.4
MS.gene63223.t1 AT5G22730 26.005 373 225 14 9 353 28 377 1.05e-13 72.4
MS.gene63223.t1 AT5G22730 26.005 373 225 14 9 353 28 377 1.05e-13 72.4
MS.gene63223.t1 AT3G59230 30.556 252 149 10 9 245 12 252 1.08e-13 72.4
MS.gene63223.t1 AT4G00320 28.079 203 131 5 9 203 13 208 1.68e-13 72.0
MS.gene63223.t1 AT3G03040 30.738 244 150 9 8 243 1 233 2.22e-13 71.6
MS.gene63223.t1 AT3G49030 29.470 302 177 10 9 300 21 296 2.30e-13 71.2
MS.gene63223.t1 AT5G22700 28.854 253 149 8 9 249 43 276 2.90e-13 70.9
MS.gene63223.t1 AT1G22000 25.159 314 177 12 10 297 30 311 3.00e-13 71.2
MS.gene63223.t1 AT3G49030 29.470 302 177 10 9 300 21 296 3.03e-13 70.9
MS.gene63223.t1 AT3G59000 34.637 179 101 8 8 180 1 169 3.07e-13 71.2
MS.gene63223.t1 AT1G64540 27.839 273 158 7 11 272 7 251 3.33e-13 70.9
MS.gene63223.t1 AT1G64540 27.839 273 158 7 11 272 7 251 3.33e-13 70.9
MS.gene63223.t1 AT1G52650 30.726 179 115 6 8 185 1 171 3.83e-13 70.9
MS.gene63223.t1 AT5G38386 33.813 139 77 5 8 141 1 129 5.07e-13 70.1
MS.gene63223.t1 AT5G38386 33.813 139 77 5 8 141 1 129 5.07e-13 70.1
MS.gene63223.t1 AT1G58310 28.975 283 174 12 9 272 8 282 6.85e-13 70.1
MS.gene63223.t1 AT5G35995 28.297 364 212 17 9 350 5 341 6.94e-13 70.1
MS.gene63223.t1 AT5G35995 28.297 364 212 17 9 350 5 341 6.94e-13 70.1
MS.gene63223.t1 AT5G22610 26.471 374 222 15 9 350 18 370 7.33e-13 70.1
MS.gene63223.t1 AT3G03030 33.520 179 102 8 8 180 1 168 8.64e-13 68.9
MS.gene63223.t1 AT1G48400 30.256 195 127 6 9 203 10 195 1.03e-12 69.3
MS.gene63223.t1 AT1G48400 30.256 195 127 6 9 203 10 195 1.11e-12 69.3
MS.gene63223.t1 AT3G03030 32.961 179 103 7 8 180 1 168 1.40e-12 68.9
MS.gene63223.t1 AT5G41830 25.333 375 231 13 9 350 13 371 1.65e-12 68.9
MS.gene63223.t1 AT3G26922 28.904 301 160 14 9 300 14 269 1.82e-12 67.4
MS.gene63223.t1 AT1G55660 27.711 249 157 10 8 248 52 285 2.02e-12 68.2
MS.gene63223.t1 AT1G55660 27.711 249 157 10 8 248 52 285 2.09e-12 68.6
MS.gene63223.t1 AT5G22610 25.562 356 218 14 9 350 18 340 2.17e-12 68.6
MS.gene63223.t1 AT3G59000 37.097 124 73 3 8 131 1 119 2.50e-12 67.8
MS.gene63223.t1 AT3G59160 27.090 299 177 11 9 275 13 302 2.51e-12 68.2
MS.gene63223.t1 AT5G18770 27.451 357 223 18 9 347 24 362 2.73e-12 67.8
MS.gene63223.t1 AT5G56560 27.350 351 212 14 10 349 6 324 3.19e-12 67.8
MS.gene63223.t1 AT1G56610 28.378 370 211 16 11 349 12 358 3.50e-12 67.8
MS.gene63223.t1 AT1G56610 28.302 371 212 16 11 350 75 422 3.80e-12 67.8
MS.gene63223.t1 AT4G10410 24.242 330 170 11 23 350 1 252 4.40e-12 66.2
MS.gene63223.t1 AT5G44980 31.071 280 147 16 7 265 2 256 4.77e-12 66.6
MS.gene63223.t1 AT5G44980 31.071 280 147 16 7 265 2 256 4.77e-12 66.6
MS.gene63223.t1 AT5G22660 25.926 324 185 12 9 305 13 308 4.78e-12 66.6
MS.gene63223.t1 AT3G26922 28.223 287 173 13 25 300 1 265 5.91e-12 65.9
MS.gene63223.t1 AT3G26922 28.223 287 173 13 25 300 1 265 5.91e-12 65.9
MS.gene63223.t1 AT5G18770 27.451 357 223 18 9 347 24 362 6.00e-12 67.0
MS.gene63223.t1 AT5G38590 29.825 228 137 11 79 299 27 238 8.30e-12 65.1
MS.gene63223.t1 AT3G58930 29.762 252 158 10 8 247 1 245 8.94e-12 66.6
MS.gene63223.t1 AT3G58930 29.762 252 158 10 8 247 1 245 8.94e-12 66.6
MS.gene63223.t1 AT3G58930 29.762 252 158 10 8 247 1 245 8.94e-12 66.6
MS.gene63223.t1 AT5G44960 26.575 365 207 18 6 349 2 326 9.42e-12 66.2
MS.gene63223.t1 AT5G38396 30.270 185 105 6 8 180 1 173 1.39e-11 65.9
MS.gene63223.t1 AT5G56370 27.019 359 199 14 8 349 1 313 1.42e-11 65.1
MS.gene63223.t1 AT5G22720 29.249 253 147 12 9 249 23 255 1.50e-11 65.9
MS.gene63223.t1 AT3G44090 32.743 226 118 12 14 228 29 231 1.58e-11 65.9
MS.gene63223.t1 AT5G56390 28.994 338 187 16 8 326 1 304 1.75e-11 65.5
MS.gene63223.t1 AT4G00315 28.340 247 158 10 8 248 1 234 2.20e-11 65.1
MS.gene63223.t1 AT1G51370 26.761 355 209 14 9 349 19 336 2.44e-11 64.7
MS.gene63223.t1 AT4G27050 28.521 284 167 14 7 272 2 267 2.47e-11 65.1
MS.gene63223.t1 AT4G27050 28.521 284 167 14 7 272 2 267 2.47e-11 65.1
MS.gene63223.t1 AT4G27050 28.521 284 167 14 7 272 2 267 2.47e-11 65.1
MS.gene63223.t1 AT4G27050 28.521 284 167 14 7 272 2 267 2.47e-11 65.1
MS.gene63223.t1 AT4G27050 28.521 284 167 14 7 272 2 267 2.47e-11 65.1
MS.gene63223.t1 AT5G56370 27.298 359 198 14 8 349 1 313 2.70e-11 65.1
MS.gene63223.t1 AT5G56370 27.298 359 198 14 8 349 1 313 2.70e-11 65.1
MS.gene63223.t1 AT5G56810 31.641 256 135 11 9 248 15 246 3.05e-11 64.3
MS.gene63223.t1 AT3G51530 27.042 355 208 14 9 349 30 347 3.62e-11 64.7
MS.gene63223.t1 AT2G29930 26.266 316 176 15 9 299 12 295 3.85e-11 64.7
MS.gene63223.t1 AT2G29930 26.266 316 176 15 9 299 12 295 3.85e-11 64.7
MS.gene63223.t1 AT1G66320 25.326 383 215 17 3 351 26 371 4.43e-11 64.3
MS.gene63223.t1 AT5G56810 31.641 256 135 11 9 248 15 246 5.30e-11 63.9
MS.gene63223.t1 AT3G49020 30.028 353 201 15 9 349 22 340 5.39e-11 63.9
MS.gene63223.t1 AT1G51370 25.852 352 216 12 9 349 19 336 5.45e-11 63.9
MS.gene63223.t1 AT3G58950 35.238 105 59 2 8 111 1 97 6.13e-11 63.9
MS.gene63223.t1 AT1G21990 26.855 283 163 13 9 273 9 265 6.93e-11 63.9
MS.gene63223.t1 AT3G50710 26.389 360 218 15 8 352 1 328 7.13e-11 63.5
MS.gene63223.t1 AT1G51370 26.761 355 209 14 9 349 19 336 7.14e-11 63.5

Find 86 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCAACAGATTCACTTTC+AGG 0.185864 8.4:+41894831 None:intergenic
TTCATTTAGTCCTGAATCTT+TGG 0.229251 8.4:-41895042 MS.gene63223:CDS
CGAATTATGGCCAAAGATTC+AGG 0.271830 8.4:+41895032 None:intergenic
CACTAAAGCTTTAGTTAAAC+TGG 0.278148 8.4:+41894487 None:intergenic
TGAAGCAAATAACGAAATTC+TGG 0.290681 8.4:+41894616 None:intergenic
GAGTATGCGGCGAAGGGGTC+GGG 0.317395 8.4:+41895999 None:intergenic
GCTCATGCGGACGGAAGTTT+TGG 0.318529 8.4:+41896226 None:intergenic
GGAAGATGGCACCCGAATTA+TGG 0.320219 8.4:+41895019 None:intergenic
CTGAATCTTTGGCCATAATT+CGG 0.323351 8.4:-41895031 MS.gene63223:CDS
CTGCTCCATTCTCGAAAATC+TGG 0.340927 8.4:-41895069 MS.gene63223:CDS
TGAATCTTTGGCCATAATTC+GGG 0.346320 8.4:-41895030 MS.gene63223:CDS
AATTCTGGAAAATCTAAAAC+AGG 0.355307 8.4:+41894631 None:intergenic
ATGTGACATAGTAAGGAATT+AGG 0.361357 8.4:+41896266 None:intergenic
CACAACATATCTGTTCATAA+AGG 0.387711 8.4:-41894515 MS.gene63223:CDS
GGAGAGAATGTGACATAGTA+AGG 0.403982 8.4:+41896259 None:intergenic
TTCTGCAATGCCGCTGCTGT+TGG 0.415216 8.4:-41894900 MS.gene63223:CDS
TGAGTATGCGGCGAAGGGGT+CGG 0.425649 8.4:+41895998 None:intergenic
CAGCAAGAGAAGAGTGTAAG+AGG 0.429448 8.4:+41895888 None:intergenic
GGTGATTCTTAACCTCTTCA+AGG 0.436934 8.4:+41894998 None:intergenic
GAAAACTTCAGTCACCTTTG+TGG 0.437723 8.4:+41894749 None:intergenic
CTTAACCTCTTCAAGGAAGA+TGG 0.444897 8.4:+41895005 None:intergenic
TGAGCCTCGTCTCTCGCAAA+TGG 0.452100 8.4:-41896208 MS.gene63223:CDS
GCTGCAATTGCAAGAATCTT+CGG 0.454485 8.4:-41895174 MS.gene63223:CDS
ATGTGATACGTTTGAGGCTA+AGG 0.460092 8.4:+41894922 None:intergenic
CTCCTCAAGGTGGGGTCCAA+TGG 0.463429 8.4:+41895953 None:intergenic
TCTGCAATGCCGCTGCTGTT+GGG 0.469306 8.4:-41894899 MS.gene63223:CDS
TGCAGAATGTGATACGTTTG+AGG 0.473408 8.4:+41894916 None:intergenic
GTCAATTGAGTATGCGGCGA+AGG 0.473628 8.4:+41895992 None:intergenic
AAGAATCACCGTTGAGGATG+AGG 0.478369 8.4:-41894985 MS.gene63223:CDS
TGAATTCGTCGTCGGGACCT+TGG 0.480798 8.4:+41896123 None:intergenic
CAGCTCTAGATGTTTAAGTC+CGG 0.487708 8.4:+41894782 None:intergenic
GTAATTTACCTCAGTCTCAA+TGG 0.489139 8.4:-41895206 MS.gene63223:intron
AGTATGCGGCGAAGGGGTCG+GGG 0.493635 8.4:+41896000 None:intergenic
GTTTAAGTCCGGAGAGAGCT+CGG 0.496233 8.4:+41894793 None:intergenic
CTCACTATCTTCTCTGCTGA+CGG 0.498232 8.4:-41895924 MS.gene63223:CDS
TTGTTCGTTGAATTCGTCGT+CGG 0.498675 8.4:+41896115 None:intergenic
AATCTCCTCCGAGCTCTCTC+CGG 0.499349 8.4:-41894801 MS.gene63223:CDS
TGTTCGTTGAATTCGTCGTC+GGG 0.501879 8.4:+41896116 None:intergenic
GCTCTAACCTTGTCTCCCTC+AGG 0.503869 8.4:-41895866 MS.gene63223:intron
TTCGTCGTCGGGACCTTGGT+AGG 0.509204 8.4:+41896127 None:intergenic
AACAGATTCACTTTCAGGAG+TGG 0.531982 8.4:+41894836 None:intergenic
GAGGACAGTGTTGACGAAAA+CGG 0.535324 8.4:+41896079 None:intergenic
TAGTAAGGAATTAGGTAGAG+TGG 0.536359 8.4:+41896274 None:intergenic
GTACAAGCAGTGGCTATTTG+CGG 0.537276 8.4:-41894656 MS.gene63223:intron
ACGTGGATCAATACTGCCAT+TGG 0.548517 8.4:-41895969 MS.gene63223:CDS
GTTGTGAGAGATTGTAGCAT+AGG 0.560170 8.4:+41894532 None:intergenic
TTAAACATCTAGAGCTGCAA+AGG 0.560995 8.4:-41894776 MS.gene63223:CDS
TCAATTGAGTATGCGGCGAA+GGG 0.561719 8.4:+41895993 None:intergenic
AGATGTGATCGCAGGAGAGA+CGG 0.568337 8.4:+41896024 None:intergenic
GAGATGAAACTCCTCAAGGT+GGG 0.571599 8.4:+41895944 None:intergenic
TATTTGCTTCATCTACAGCT+CGG 0.576315 8.4:-41894604 MS.gene63223:CDS
TACGAATGACGCGTGAACGA+CGG 0.579028 8.4:+41896051 None:intergenic
GGGTGCCATCTTCCTTGAAG+AGG 0.580167 8.4:-41895010 MS.gene63223:CDS
AGCTCCAACCTCATCCTCAA+CGG 0.582808 8.4:+41894977 None:intergenic
ATCACCGTTGAGGATGAGGT+TGG 0.582915 8.4:-41894981 MS.gene63223:CDS
AGAGACGAGGCTCATGCGGA+CGG 0.582939 8.4:+41896217 None:intergenic
CGCGTGAACGACGGAGAGCG+AGG 0.583608 8.4:+41896060 None:intergenic
GAATGGAGCAGCGAGAGAGA+AGG 0.584558 8.4:+41895081 None:intergenic
GCGAGAGAGAAGGATATTCA+CGG 0.590240 8.4:+41895091 None:intergenic
AGGCTAAGGTACTTGAGACC+AGG 0.591768 8.4:+41894936 None:intergenic
TGCGAGAGACGAGGCTCATG+CGG 0.591916 8.4:+41896213 None:intergenic
GCTCGGAGGAGATTGAGTAA+AGG 0.595653 8.4:+41894810 None:intergenic
GTTGTTACCTGAGGGAGACA+AGG 0.606475 8.4:+41895859 None:intergenic
AGTTGCAGCGCCTTCAGTGA+CGG 0.607429 8.4:+41895140 None:intergenic
ACCTTGGTAGGTGTACTCGT+TGG 0.609264 8.4:+41896139 None:intergenic
GTGCAAGTTCCCAACAGCAG+CGG 0.612349 8.4:+41894890 None:intergenic
GTCGGGGTAGATGTGATCGC+AGG 0.618469 8.4:+41896016 None:intergenic
TTCTGGAAAATCTAAAACAG+GGG 0.621912 8.4:+41894633 None:intergenic
TCGCTTGAAATAGATGCACC+TGG 0.623810 8.4:-41894954 MS.gene63223:CDS
GCAACTACTAGAGTACCGCT+TGG 0.626436 8.4:-41895123 MS.gene63223:CDS
CCACGTGTCAATTGAGTATG+CGG 0.630561 8.4:+41895986 None:intergenic
TGCGCCATTTGCGAGAGACG+AGG 0.637473 8.4:+41896204 None:intergenic
AGATGAAACTCCTCAAGGTG+GGG 0.640751 8.4:+41895945 None:intergenic
TGCCATTGGACCCCACCTTG+AGG 0.645630 8.4:-41895955 MS.gene63223:CDS
TGAGATGAAACTCCTCAAGG+TGG 0.650967 8.4:+41895943 None:intergenic
CCGCATACTCAATTGACACG+TGG 0.661374 8.4:-41895986 MS.gene63223:CDS
CAATTGAGTATGCGGCGAAG+GGG 0.661752 8.4:+41895994 None:intergenic
TAGTGAGATGAAACTCCTCA+AGG 0.664605 8.4:+41895940 None:intergenic
ATTCTGGAAAATCTAAAACA+GGG 0.665662 8.4:+41894632 None:intergenic
GCTGCAAAGGTTAACCACAA+AGG 0.689371 8.4:-41894763 MS.gene63223:intron
ACCAACGAGTACACCTACCA+AGG 0.690037 8.4:-41896140 MS.gene63223:CDS
AGACGTCAAGAGTCTTACAA+AGG 0.691917 8.4:+41896180 None:intergenic
TAAGTCCGGAGAGAGCTCGG+AGG 0.709180 8.4:+41894796 None:intergenic
TGTTGGGAACTTGCACAGCG+TGG 0.717427 8.4:-41894883 MS.gene63223:CDS
TCACGGAATTCAAATCCAAG+CGG 0.723562 8.4:+41895108 None:intergenic
GAGGTTAAGAATCACCGTTG+AGG 0.730056 8.4:-41894991 MS.gene63223:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTAAAACATAAAAAATTT+AGG + chr8.4:41895448-41895467 None:intergenic 10.0%
!!! AAATATTTTTTTTTTGCTTT+TGG - chr8.4:41895243-41895262 MS.gene63223:intron 10.0%
!! ACAAAAAAATAAAACAAAAG+AGG + chr8.4:41894988-41895007 None:intergenic 15.0%
!! TGAACTAAGTAAAATAATTA+TGG + chr8.4:41895527-41895546 None:intergenic 15.0%
!!! ACCAAAAAAAATATTTTTAC+AGG - chr8.4:41895372-41895391 MS.gene63223:intron 15.0%
!!! CCAAAAAAAATATTTTTACA+GGG - chr8.4:41895373-41895392 MS.gene63223:intron 15.0%
!!! TTTCATTTCAAAATTTGTTT+CGG - chr8.4:41895016-41895035 MS.gene63223:CDS 15.0%
!!! AAATTGATTCATATTGGATT+TGG - chr8.4:41895294-41895313 MS.gene63223:intron 20.0%
!!! AAGTTTTGCTTTTTTGTTTT+AGG - chr8.4:41895131-41895150 MS.gene63223:CDS 20.0%
!!! CAATATGAATCAATTTTGTA+AGG + chr8.4:41895290-41895309 None:intergenic 20.0%
!!! CCCTGTAAAAATATTTTTTT+TGG + chr8.4:41895376-41895395 None:intergenic 20.0%
!!! CTTACAAAATTGATTCATAT+TGG - chr8.4:41895288-41895307 MS.gene63223:intron 20.0%
! ATAAAACAAAAGAGGATGAA+AGG + chr8.4:41894980-41894999 None:intergenic 25.0%
! CAAAACACTTTATGTTTGTA+TGG + chr8.4:41895175-41895194 None:intergenic 25.0%
!! AATTCTGGAAAATCTAAAAC+AGG + chr8.4:41896181-41896200 None:intergenic 25.0%
!! ATTCTGGAAAATCTAAAACA+GGG + chr8.4:41896180-41896199 None:intergenic 25.0%
!!! ACATAAAGTGTTTTGCTTTT+AGG - chr8.4:41895180-41895199 MS.gene63223:CDS 25.0%
!!! TACAAACATTTTGTTTCAAG+TGG + chr8.4:41895112-41895131 None:intergenic 25.0%
AATCACTTGAGTCAATTGTT+TGG - chr8.4:41895343-41895362 MS.gene63223:intron 30.0%
AGGACTAAAACATAACAAGA+AGG + chr8.4:41895270-41895289 None:intergenic 30.0%
ATGTGACATAGTAAGGAATT+AGG + chr8.4:41894546-41894565 None:intergenic 30.0%
CACAACATATCTGTTCATAA+AGG - chr8.4:41896294-41896313 MS.gene63223:CDS 30.0%
CAGAAGGTTTGATATTTACA+AGG - chr8.4:41895404-41895423 MS.gene63223:intron 30.0%
TGAAGCAAATAACGAAATTC+TGG + chr8.4:41896196-41896215 None:intergenic 30.0%
TTCATTTAGTCCTGAATCTT+TGG - chr8.4:41895767-41895786 MS.gene63223:intron 30.0%
! GTTGATAAGGACATTGTAAT+AGG - chr8.4:41895052-41895071 MS.gene63223:CDS 30.0%
! TTCTGGAAAATCTAAAACAG+GGG + chr8.4:41896179-41896198 None:intergenic 30.0%
!! AATTTCCAGATTTTCGAGAA+TGG + chr8.4:41895748-41895767 None:intergenic 30.0%
!! TAAGCTTAACTGAGTTGATA+AGG - chr8.4:41895039-41895058 MS.gene63223:CDS 30.0%
!! TGATTAACTAGCTCTACTAA+AGG + chr8.4:41895328-41895347 None:intergenic 30.0%
CTGAATCTTTGGCCATAATT+CGG - chr8.4:41895778-41895797 MS.gene63223:intron 35.0%
GTAATTTACCTCAGTCTCAA+TGG - chr8.4:41895603-41895622 MS.gene63223:intron 35.0%
TAGTAAGGAATTAGGTAGAG+TGG + chr8.4:41894538-41894557 None:intergenic 35.0%
TATTTGCTTCATCTACAGCT+CGG - chr8.4:41896205-41896224 MS.gene63223:CDS 35.0%
TGAATCTTTGGCCATAATTC+GGG - chr8.4:41895779-41895798 MS.gene63223:intron 35.0%
! AAAGGAATTGTTGTTACCTG+AGG + chr8.4:41894962-41894981 None:intergenic 35.0%
! AAGGAATTGTTGTTACCTGA+GGG + chr8.4:41894961-41894980 None:intergenic 35.0%
! TGCTTTTAATCCCTAAACGT+CGG - chr8.4:41895482-41895501 MS.gene63223:intron 35.0%
! TTAAACATCTAGAGCTGCAA+AGG - chr8.4:41896033-41896052 MS.gene63223:CDS 35.0%
!! TTTTTAGTCTCCGACGTTTA+GGG + chr8.4:41895495-41895514 None:intergenic 35.0%
AAAAATTCACCCGAGTGAGT+GGG + chr8.4:41895087-41895106 None:intergenic 40.0%
AAATAGCCACTGCTTGTACA+TGG + chr8.4:41896152-41896171 None:intergenic 40.0%
AACAGATTCACTTTCAGGAG+TGG + chr8.4:41895976-41895995 None:intergenic 40.0%
AGACGTCAAGAGTCTTACAA+AGG + chr8.4:41894632-41894651 None:intergenic 40.0%
AGATATAGCCATTGAGACTG+AGG + chr8.4:41895614-41895633 None:intergenic 40.0%
CGAATTATGGCCAAAGATTC+AGG + chr8.4:41895780-41895799 None:intergenic 40.0%
CTTAACCTCTTCAAGGAAGA+TGG + chr8.4:41895807-41895826 None:intergenic 40.0%
GAAAACTTCAGTCACCTTTG+TGG + chr8.4:41896063-41896082 None:intergenic 40.0%
GCTGCAATTGCAAGAATCTT+CGG - chr8.4:41895635-41895654 MS.gene63223:intron 40.0%
GGAGAGAATGTGACATAGTA+AGG + chr8.4:41894553-41894572 None:intergenic 40.0%
GGTGATTCTTAACCTCTTCA+AGG + chr8.4:41895814-41895833 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG + chr8.4:41895981-41896000 None:intergenic 40.0%
GTAATAGATTCCCACTCACT+CGG - chr8.4:41895074-41895093 MS.gene63223:CDS 40.0%
GTTGTGAGAGATTGTAGCAT+AGG + chr8.4:41896280-41896299 None:intergenic 40.0%
TAAAAATTCACCCGAGTGAG+TGG + chr8.4:41895088-41895107 None:intergenic 40.0%
TAATAGATTCCCACTCACTC+GGG - chr8.4:41895075-41895094 MS.gene63223:CDS 40.0%
TAGTGAGATGAAACTCCTCA+AGG + chr8.4:41894872-41894891 None:intergenic 40.0%
TCACGGAATTCAAATCCAAG+CGG + chr8.4:41895704-41895723 None:intergenic 40.0%
TGCAGAATGTGATACGTTTG+AGG + chr8.4:41895896-41895915 None:intergenic 40.0%
TTACAGGGACTAAAAGCAGA+AGG - chr8.4:41895388-41895407 MS.gene63223:intron 40.0%
TTGTTCGTTGAATTCGTCGT+CGG + chr8.4:41894697-41894716 None:intergenic 40.0%
! ATGTGATACGTTTGAGGCTA+AGG + chr8.4:41895890-41895909 None:intergenic 40.0%
! ATTTTGCTTACCGTCACTGA+AGG - chr8.4:41895659-41895678 MS.gene63223:intron 40.0%
!! CAGCTCTAGATGTTTAAGTC+CGG + chr8.4:41896030-41896049 None:intergenic 40.0%
!!! GTTTTTAGTCTCCGACGTTT+AGG + chr8.4:41895496-41895515 None:intergenic 40.0%
AAGAATCACCGTTGAGGATG+AGG - chr8.4:41895824-41895843 MS.gene63223:intron 45.0%
ACGTGGATCAATACTGCCAT+TGG - chr8.4:41894840-41894859 MS.gene63223:CDS 45.0%
AGATGAAACTCCTCAAGGTG+GGG + chr8.4:41894867-41894886 None:intergenic 45.0%
CCACGTGTCAATTGAGTATG+CGG + chr8.4:41894826-41894845 None:intergenic 45.0%
CTCACTATCTTCTCTGCTGA+CGG - chr8.4:41894885-41894904 MS.gene63223:CDS 45.0%
CTGCTCCATTCTCGAAAATC+TGG - chr8.4:41895740-41895759 MS.gene63223:intron 45.0%
GAGATGAAACTCCTCAAGGT+GGG + chr8.4:41894868-41894887 None:intergenic 45.0%
GAGGTTAAGAATCACCGTTG+AGG - chr8.4:41895818-41895837 MS.gene63223:intron 45.0%
GCGAGAGAGAAGGATATTCA+CGG + chr8.4:41895721-41895740 None:intergenic 45.0%
GCTGCAAAGGTTAACCACAA+AGG - chr8.4:41896046-41896065 MS.gene63223:CDS 45.0%
GTACAAGCAGTGGCTATTTG+CGG - chr8.4:41896153-41896172 MS.gene63223:CDS 45.0%
TCAATTGAGTATGCGGCGAA+GGG + chr8.4:41894819-41894838 None:intergenic 45.0%
TCGCTTGAAATAGATGCACC+TGG - chr8.4:41895855-41895874 MS.gene63223:intron 45.0%
TGAGATGAAACTCCTCAAGG+TGG + chr8.4:41894869-41894888 None:intergenic 45.0%
TGTTCGTTGAATTCGTCGTC+GGG + chr8.4:41894696-41894715 None:intergenic 45.0%
! CAGCAAGAGAAGAGTGTAAG+AGG + chr8.4:41894924-41894943 None:intergenic 45.0%
! CTTTTGCCATGTACAAGCAG+TGG - chr8.4:41896143-41896162 MS.gene63223:CDS 45.0%
!! GAGGACAGTGTTGACGAAAA+CGG + chr8.4:41894733-41894752 None:intergenic 45.0%
ACCAACGAGTACACCTACCA+AGG - chr8.4:41894669-41894688 MS.gene63223:intron 50.0%
ACCTTGGTAGGTGTACTCGT+TGG + chr8.4:41894673-41894692 None:intergenic 50.0%
AGATGTGATCGCAGGAGAGA+CGG + chr8.4:41894788-41894807 None:intergenic 50.0%
AGCTCCAACCTCATCCTCAA+CGG + chr8.4:41895835-41895854 None:intergenic 50.0%
ATCACCGTTGAGGATGAGGT+TGG - chr8.4:41895828-41895847 MS.gene63223:intron 50.0%
CAATTGAGTATGCGGCGAAG+GGG + chr8.4:41894818-41894837 None:intergenic 50.0%
CCGCATACTCAATTGACACG+TGG - chr8.4:41894823-41894842 MS.gene63223:CDS 50.0%
GCTCGGAGGAGATTGAGTAA+AGG + chr8.4:41896002-41896021 None:intergenic 50.0%
GGAAGATGGCACCCGAATTA+TGG + chr8.4:41895793-41895812 None:intergenic 50.0%
GTCAATTGAGTATGCGGCGA+AGG + chr8.4:41894820-41894839 None:intergenic 50.0%
GTTGTTACCTGAGGGAGACA+AGG + chr8.4:41894953-41894972 None:intergenic 50.0%
GTTTAAGTCCGGAGAGAGCT+CGG + chr8.4:41896019-41896038 None:intergenic 50.0%
TACGAATGACGCGTGAACGA+CGG + chr8.4:41894761-41894780 None:intergenic 50.0%
! AGGCTAAGGTACTTGAGACC+AGG + chr8.4:41895876-41895895 None:intergenic 50.0%
!! ATGCGGACGGAAGTTTTGGT+AGG + chr8.4:41894582-41894601 None:intergenic 50.0%
!! GCAACTACTAGAGTACCGCT+TGG - chr8.4:41895686-41895705 MS.gene63223:intron 50.0%
!! GGAAGTTTTGGTAGGGAGGA+AGG + chr8.4:41894574-41894593 None:intergenic 50.0%
!! TGCGGACGGAAGTTTTGGTA+GGG + chr8.4:41894581-41894600 None:intergenic 50.0%
AATCTCCTCCGAGCTCTCTC+CGG - chr8.4:41896008-41896027 MS.gene63223:CDS 55.0%
AGTTGCAGCGCCTTCAGTGA+CGG + chr8.4:41895672-41895691 None:intergenic 55.0%
GAATGGAGCAGCGAGAGAGA+AGG + chr8.4:41895731-41895750 None:intergenic 55.0%
GCTCTAACCTTGTCTCCCTC+AGG - chr8.4:41894943-41894962 MS.gene63223:CDS 55.0%
GTGCAAGTTCCCAACAGCAG+CGG + chr8.4:41895922-41895941 None:intergenic 55.0%
TCTGCAATGCCGCTGCTGTT+GGG - chr8.4:41895910-41895929 MS.gene63223:CDS 55.0%
TGAATTCGTCGTCGGGACCT+TGG + chr8.4:41894689-41894708 None:intergenic 55.0%
TGAGCCTCGTCTCTCGCAAA+TGG - chr8.4:41894601-41894620 MS.gene63223:CDS 55.0%
TGTTGGGAACTTGCACAGCG+TGG - chr8.4:41895926-41895945 MS.gene63223:CDS 55.0%
TTCTGCAATGCCGCTGCTGT+TGG - chr8.4:41895909-41895928 MS.gene63223:CDS 55.0%
! GCTCATGCGGACGGAAGTTT+TGG + chr8.4:41894586-41894605 None:intergenic 55.0%
! GGGTGCCATCTTCCTTGAAG+AGG - chr8.4:41895799-41895818 MS.gene63223:intron 55.0%
!! GGACGGAAGTTTTGGTAGGG+AGG + chr8.4:41894578-41894597 None:intergenic 55.0%
AGAGACGAGGCTCATGCGGA+CGG + chr8.4:41894595-41894614 None:intergenic 60.0%
CTCCTCAAGGTGGGGTCCAA+TGG + chr8.4:41894859-41894878 None:intergenic 60.0%
GTCGGGGTAGATGTGATCGC+AGG + chr8.4:41894796-41894815 None:intergenic 60.0%
TAAGTCCGGAGAGAGCTCGG+AGG + chr8.4:41896016-41896035 None:intergenic 60.0%
TGAGTATGCGGCGAAGGGGT+CGG + chr8.4:41894814-41894833 None:intergenic 60.0%
TGCCATTGGACCCCACCTTG+AGG - chr8.4:41894854-41894873 MS.gene63223:CDS 60.0%
TGCGAGAGACGAGGCTCATG+CGG + chr8.4:41894599-41894618 None:intergenic 60.0%
TGCGCCATTTGCGAGAGACG+AGG + chr8.4:41894608-41894627 None:intergenic 60.0%
TTCGTCGTCGGGACCTTGGT+AGG + chr8.4:41894685-41894704 None:intergenic 60.0%
AGTATGCGGCGAAGGGGTCG+GGG + chr8.4:41894812-41894831 None:intergenic 65.0%
GAGTATGCGGCGAAGGGGTC+GGG + chr8.4:41894813-41894832 None:intergenic 65.0%
CGCGTGAACGACGGAGAGCG+AGG + chr8.4:41894752-41894771 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 41894501 41896330 41894501 ID=MS.gene63223
chr8.4 mRNA 41894501 41896330 41894501 ID=MS.gene63223.t1;Parent=MS.gene63223
chr8.4 exon 41895867 41896330 41895867 ID=MS.gene63223.t1.exon1;Parent=MS.gene63223.t1
chr8.4 CDS 41895867 41896330 41895867 ID=cds.MS.gene63223.t1;Parent=MS.gene63223.t1
chr8.4 exon 41894764 41895214 41894764 ID=MS.gene63223.t1.exon2;Parent=MS.gene63223.t1
chr8.4 CDS 41894764 41895214 41894764 ID=cds.MS.gene63223.t1;Parent=MS.gene63223.t1
chr8.4 exon 41894501 41894668 41894501 ID=MS.gene63223.t1.exon3;Parent=MS.gene63223.t1
chr8.4 CDS 41894501 41894668 41894501 ID=cds.MS.gene63223.t1;Parent=MS.gene63223.t1
Gene Sequence

>MS.gene63223

ATGGAGGAAGAGAACGATGACATTGACAGACTTACCACTCTACCTAATTCCTTACTATGTCACATTCTCTCCTTCCTCCCTACCAAAACTTCCGTCCGCATGAGCCTCGTCTCTCGCAAATGGCGCAACCTTTGTAAGACTCTTGACGTCTTCGATTTCAACGACAACACCAACGAGTACACCTACCAAGGTCCCGACGACGAATTCAACGAACAATTCATGTCATTCACCGTTTTCGTCAACACTGTCCTCGCTCTCCGTCGTTCACGCGTCATTCGTAAGTTCCGTCTCTCCTGCGATCACATCTACCCCGACCCCTTCGCCGCATACTCAATTGACACGTGGATCAATACTGCCATTGGACCCCACCTTGAGGAGTTTCATCTCACTATCTTCTCTGCTGACGGTTTCAGTAATCTGCCTCTTACACTCTTCTCTTGCTGCTCTAACCTTGTCTCCCTCAGGTAACAACAATTCCTTTCATCCTCTTTTGTTTTATTTTTTTGTTTACTACATTTCATTTCAAAATTTGTTTCGGTAAGCTTAACTGAGTTGATAAGGACATTGTAATAGGTAATAGATTCCCACTCACTCGGGTGAATTTTTAGCCACTTGAAACAAAATGTTTGTAAGTTTTGCTTTTTTGTTTTAGGCTTAAATATGCAAATGATCCATACAAACATAAAGTGTTTTGCTTTTAGGTCATTGTAATTTTTTGTTTTTGTTTTGTTTTAGTACTTGCAAATATTTTTTTTTTGCTTTTGGTCCTTCTTGTTATGTTTTAGTCCTTACAAAATTGATTCATATTGGATTTGGTACTTGATCCTTTAGTAGAGCTAGTTAATCACTTGAGTCAATTGTTTGGACTGAAACCAAAAAAAATATTTTTACAGGGACTAAAAGCAGAAGGTTTGATATTTACAAGGATCATTTGCTTATTTAAGCCTAAATTTTTTATGTTTTACAAATTATATAACTGTTTGCTTTTAATCCCTAAACGTCGGAGACTAAAAACATGTTTAACCATAATTATTTTACTTAGTTCAGCTATTCTGATTTGATATAGATGCGAAATGATATAAGATGATAACGTAACATTCATGTAATTTACCTCAGTCTCAATGGCTATATCTTGCTGCAATTGCAAGAATCTTCGGTATTTTGCTTACCGTCACTGAAGGCGCTGCAACTACTAGAGTACCGCTTGGATTTGAATTCCGTGAATATCCTTCTCTCTCGCTGCTCCATTCTCGAAAATCTGGAAATTTCATTTAGTCCTGAATCTTTGGCCATAATTCGGGTGCCATCTTCCTTGAAGAGGTTAAGAATCACCGTTGAGGATGAGGTTGGAGCTTCGCTTGAAATAGATGCACCTGGTCTCAAGTACCTTAGCCTCAAACGTATCACATTCTGCAATGCCGCTGCTGTTGGGAACTTGCACAGCGTGGAAGAAGCATATCTCGATGTATTTTCCACTCCTGAAAGTGAATCTGTTGAACCTTTACTCAATCTCCTCCGAGCTCTCTCCGGACTTAAACATCTAGAGCTGCAAAGGTTAACCACAAAGGTGACTGAAGTTTTCATTATTTCTAATATATGTAATTTTGTATTAATAATTATTAAACAGTTAGTTAATCACTTGCTTTTGCCATGTACAAGCAGTGGCTATTTGCGGCCCCTGTTTTAGATTTTCCAGAATTTCGTTATTTGCTTCATCTACAGCTCGGACTTCTCTCTTTCAATGCAACTTTTCTGTTCGACATGCTTCAAAAATGTCCTATGCTACAATCTCTCACAACATATCTGTTCATAAAGGTTTGTCCAGTTTAA

Protein sequence

>MS.gene63223.t1

MEEENDDIDRLTTLPNSLLCHILSFLPTKTSVRMSLVSRKWRNLCKTLDVFDFNDNTNEYTYQGPDDEFNEQFMSFTVFVNTVLALRRSRVIRKFRLSCDHIYPDPFAAYSIDTWINTAIGPHLEEFHLTIFSADGFSNLPLTLFSCCSNLVSLSLNGYILLQLQESSVFCLPSLKALQLLEYRLDLNSVNILLSRCSILENLEISFSPESLAIIRVPSSLKRLRITVEDEVGASLEIDAPGLKYLSLKRITFCNAAAVGNLHSVEEAYLDVFSTPESESVEPLLNLLRALSGLKHLELQRLTTKWLFAAPVLDFPEFRYLLHLQLGLLSFNATFLFDMLQKCPMLQSLTTYLFIKVCPV