AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25396


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25396.t1 MTR_8g469020 93.421 456 30 0 1 456 1 456 0.0 868
MS.gene25396.t1 MTR_8g058965 66.444 450 148 2 7 455 13 460 0.0 585
MS.gene25396.t1 MTR_4g050250 64.356 404 131 7 5 397 19 420 2.14e-170 485
MS.gene25396.t1 MTR_8g070950 56.103 467 146 10 7 456 15 439 5.20e-161 462
MS.gene25396.t1 MTR_8g062010 53.712 458 171 7 7 455 9 434 1.45e-152 441
MS.gene25396.t1 MTR_8g062080 51.812 469 174 13 2 455 18 449 1.51e-142 416
MS.gene25396.t1 MTR_8g062310 52.643 454 166 11 7 456 25 433 1.64e-140 410
MS.gene25396.t1 MTR_8g062300 47.746 488 184 11 7 455 26 481 4.28e-128 380
MS.gene25396.t1 MTR_2g083840 43.805 452 234 7 6 451 20 457 3.42e-99 305
MS.gene25396.t1 MTR_8g467790 46.269 402 147 13 7 395 148 493 2.64e-98 304
MS.gene25396.t1 MTR_4g032730 40.506 474 230 12 7 450 15 466 2.39e-95 295
MS.gene25396.t1 MTR_8g468810 41.739 460 232 14 7 451 25 463 9.10e-95 294
MS.gene25396.t1 MTR_8g058970 41.719 477 228 17 7 451 19 477 6.66e-93 289
MS.gene25396.t1 MTR_8g062270 39.651 459 241 11 7 450 16 453 3.09e-86 271
MS.gene25396.t1 MTR_8g468840 40.708 452 242 9 7 449 14 448 7.24e-86 270
MS.gene25396.t1 MTR_8g467800 41.631 466 229 12 7 456 20 458 4.29e-84 266
MS.gene25396.t1 MTR_5g092960 38.478 460 250 8 7 450 19 461 6.20e-81 258
MS.gene25396.t1 MTR_8g014260 38.987 454 250 14 7 451 16 451 7.01e-77 247
MS.gene25396.t1 MTR_8g468810 41.779 371 176 13 7 361 25 371 7.71e-70 226
MS.gene25396.t1 MTR_8g468760 38.126 459 220 13 7 450 9 418 5.15e-69 226
MS.gene25396.t1 MTR_8g014160 38.395 461 204 20 1 451 35 425 2.51e-64 213
MS.gene25396.t1 MTR_8g445780 39.163 406 211 13 7 404 13 390 6.58e-62 206
MS.gene25396.t1 MTR_2g086020 70.139 144 43 0 313 456 177 320 7.12e-62 204
MS.gene25396.t1 MTR_2g086020 47.020 151 64 4 34 178 2 142 4.49e-31 122
MS.gene25396.t1 MTR_8g468810 42.038 314 150 10 7 311 25 315 5.24e-59 196
MS.gene25396.t1 MTR_8g468810 42.038 314 150 10 7 311 25 315 7.36e-59 196
MS.gene25396.t1 MTR_8g468810 42.038 314 150 10 7 311 25 315 1.06e-58 197
MS.gene25396.t1 MTR_5g092960 37.875 367 202 6 7 361 19 371 5.37e-55 188
MS.gene25396.t1 MTR_8g467800 41.158 311 156 8 7 311 20 309 1.64e-43 156
MS.gene25396.t1 MTR_4g024710 38.835 309 164 12 149 451 58 347 2.16e-41 150
MS.gene25396.t1 MTR_8g014210 39.496 238 132 8 219 451 1 231 9.21e-35 129
MS.gene25396.t1 MTR_5g021550 51.370 146 65 6 7 148 19 162 1.24e-33 124
MS.gene25396.t1 MTR_1g041245 28.788 462 232 18 4 451 8 386 4.41e-33 129
MS.gene25396.t1 MTR_4g024745 36.806 288 159 11 147 429 10 279 3.63e-32 124
MS.gene25396.t1 MTR_8g077460 38.462 234 122 7 7 234 10 227 6.73e-31 122
MS.gene25396.t1 MTR_8g077460 46.617 133 68 3 319 451 246 375 1.93e-28 115
MS.gene25396.t1 MTR_5g080710 28.764 445 278 16 7 443 33 446 1.56e-28 117
MS.gene25396.t1 MTR_5g084070 26.398 447 281 15 6 443 12 419 4.21e-28 116
MS.gene25396.t1 MTR_3g099800 57.471 87 36 1 363 448 19 105 6.30e-27 104
MS.gene25396.t1 MTR_7g056433 26.432 454 253 15 5 451 10 389 6.36e-25 106
MS.gene25396.t1 MTR_4g024720 48.246 114 53 4 7 116 17 128 2.07e-24 100
MS.gene25396.t1 MTR_6g022500 27.983 461 231 17 7 451 101 476 9.42e-24 103
MS.gene25396.t1 MTR_8g014290 42.208 154 75 5 7 149 10 160 3.95e-23 95.9
MS.gene25396.t1 MTR_5g008950 25.219 456 237 17 9 451 1 365 4.56e-22 97.8
MS.gene25396.t1 MTR_7g026500 26.623 462 252 17 3 452 10 396 1.48e-21 96.7
MS.gene25396.t1 MTR_2g036470 26.840 462 244 20 5 450 12 395 8.03e-21 94.4
MS.gene25396.t1 MTR_7g034115 26.608 451 237 19 4 443 8 375 1.27e-20 93.6
MS.gene25396.t1 MTR_3g023630 26.106 452 238 18 6 448 7 371 3.85e-20 92.0
MS.gene25396.t1 MTR_5g045170 27.273 451 239 20 9 448 16 388 5.45e-20 92.0
MS.gene25396.t1 MTR_7g033915 25.591 465 220 18 4 450 8 364 1.94e-19 90.1
MS.gene25396.t1 MTR_3g105060 24.612 451 249 15 4 451 11 373 4.95e-19 89.0
MS.gene25396.t1 MTR_3g087260 26.572 493 265 15 7 450 12 456 8.98e-18 85.9
MS.gene25396.t1 MTR_3g108150 31.481 216 116 9 1 213 7 193 1.70e-17 84.3
MS.gene25396.t1 MTR_7g056447 31.429 210 111 8 4 209 6 186 3.59e-17 82.0
MS.gene25396.t1 MTR_2g007500 29.577 213 112 6 2 211 9 186 1.19e-16 81.3
MS.gene25396.t1 MTR_1g038710 26.606 436 271 15 7 419 19 428 2.91e-16 81.3
MS.gene25396.t1 MTR_7g032380 31.429 210 117 8 4 211 8 192 3.10e-16 80.1
MS.gene25396.t1 MTR_7g032380 33.582 134 82 3 324 451 224 356 1.77e-12 68.9
MS.gene25396.t1 MTR_5g007410 26.000 450 259 17 12 455 31 412 8.57e-16 79.7
MS.gene25396.t1 MTR_4g056020 25.446 448 263 13 7 423 9 416 1.74e-15 79.0
MS.gene25396.t1 MTR_5g073420 30.952 210 122 8 3 210 7 195 2.54e-15 77.8
MS.gene25396.t1 MTR_6g011460 32.444 225 122 9 7 227 46 244 2.65e-15 78.2
MS.gene25396.t1 MTR_1g108820 27.840 449 250 21 4 448 5 383 3.99e-15 77.4
MS.gene25396.t1 MTR_4g056040 26.452 465 259 19 7 419 9 442 4.88e-15 77.8
MS.gene25396.t1 MTR_8g014230 42.857 84 46 2 361 444 17 98 1.02e-14 70.5
MS.gene25396.t1 MTR_8g085430 29.358 218 118 9 4 211 8 199 1.38e-14 75.1
MS.gene25396.t1 MTR_7g088260 24.944 449 256 18 7 451 91 462 1.44e-14 75.9
MS.gene25396.t1 MTR_3g107160 33.962 212 113 8 7 214 10 198 1.54e-14 75.5
MS.gene25396.t1 MTR_4g098590 25.768 423 232 15 9 418 1 354 1.58e-14 75.5
MS.gene25396.t1 MTR_5g008920 32.227 211 112 8 5 211 7 190 2.26e-14 75.1
MS.gene25396.t1 MTR_7g115270 29.545 220 122 8 4 214 9 204 3.04e-14 74.7
MS.gene25396.t1 MTR_7g115270 30.986 142 93 3 311 448 259 399 5.39e-11 64.7
MS.gene25396.t1 MTR_4g056030 32.039 206 119 7 7 211 9 194 3.13e-14 75.1
MS.gene25396.t1 MTR_3g099830 25.751 466 220 21 5 448 10 371 3.47e-14 74.3
MS.gene25396.t1 MTR_7g034110 29.224 219 116 9 4 213 8 196 4.08e-14 73.9
MS.gene25396.t1 MTR_2g007400 23.950 476 265 16 1 454 6 406 4.82e-14 73.9
MS.gene25396.t1 MTR_4g055990 28.270 474 251 22 7 419 9 454 5.97e-14 74.3
MS.gene25396.t1 MTR_7g055943 32.857 210 111 10 5 210 38 221 7.58e-14 73.6
MS.gene25396.t1 MTR_4g080773 24.370 476 283 17 7 447 19 452 1.10e-13 73.2
MS.gene25396.t1 MTR_4g055990 28.270 474 251 22 7 419 9 454 1.23e-13 73.2
MS.gene25396.t1 MTR_4g080773 24.370 476 283 17 7 447 19 452 1.31e-13 73.2
MS.gene25396.t1 MTR_4g080590 24.590 427 279 14 7 419 23 420 1.81e-13 72.4
MS.gene25396.t1 MTR_1g053025 25.764 458 251 21 7 448 2 386 2.01e-13 72.0
MS.gene25396.t1 MTR_7g098570 29.911 224 120 9 7 222 20 214 2.26e-13 72.4
MS.gene25396.t1 MTR_2g082880 24.645 422 268 14 7 413 10 396 5.48e-13 70.9
MS.gene25396.t1 MTR_5g087940 33.484 221 115 10 7 220 26 221 5.88e-13 70.9
MS.gene25396.t1 MTR_7g021630 27.304 293 170 10 7 289 17 276 7.18e-13 70.1
MS.gene25396.t1 MTR_5g058100 29.954 217 121 7 2 214 4 193 8.47e-13 70.1
MS.gene25396.t1 MTR_7g021630 27.304 293 170 10 7 289 17 276 8.54e-13 70.1
MS.gene25396.t1 MTR_4g039440 26.170 470 233 20 6 451 33 412 1.56e-12 69.3
MS.gene25396.t1 MTR_2g100590 24.416 385 228 13 5 378 40 372 4.06e-12 68.2
MS.gene25396.t1 MTR_2g007450 29.493 217 124 7 7 210 16 216 4.33e-12 68.2
MS.gene25396.t1 MTR_2g100590 24.416 385 228 13 5 378 40 372 4.44e-12 68.2
MS.gene25396.t1 MTR_0543s0010 30.660 212 114 10 1 211 80 259 5.83e-12 67.8
MS.gene25396.t1 MTR_7g075820 28.440 218 129 6 4 208 3 206 6.40e-12 67.4
MS.gene25396.t1 MTR_3g107100 32.524 206 115 8 7 211 11 193 6.42e-12 67.4
MS.gene25396.t1 MTR_7g032370 29.221 154 96 4 305 451 205 352 6.49e-12 67.0
MS.gene25396.t1 MTR_6g022360 31.707 205 103 8 7 210 43 211 6.53e-12 67.4
MS.gene25396.t1 MTR_2g100590 24.416 385 228 13 5 378 40 372 6.60e-12 68.2
MS.gene25396.t1 MTR_0492s0020 30.660 212 114 10 1 211 80 259 7.08e-12 67.4
MS.gene25396.t1 MTR_7g007340 28.507 221 94 9 3 211 4 172 7.59e-12 67.0
MS.gene25396.t1 MTR_5g058000 31.220 205 109 9 7 207 8 184 8.12e-12 67.0
MS.gene25396.t1 MTR_2g005990 28.899 218 122 9 5 210 4 200 1.06e-11 66.6
MS.gene25396.t1 MTR_3g115430 36.937 111 64 3 342 451 20 125 1.14e-11 62.4
MS.gene25396.t1 MTR_6g022390 34.752 141 79 5 7 141 5 138 1.70e-11 62.4
MS.gene25396.t1 MTR_7g098510 35.455 110 71 0 342 451 282 391 1.77e-11 66.2
MS.gene25396.t1 MTR_7g033990 28.346 254 140 8 5 242 9 236 2.37e-11 65.9
MS.gene25396.t1 MTR_3g110010 33.495 206 108 10 7 211 13 190 3.15e-11 66.2
MS.gene25396.t1 MTR_6g044572 31.858 226 115 9 7 210 2 210 3.32e-11 65.1
MS.gene25396.t1 MTR_6g044560 30.242 248 132 10 7 230 178 408 4.49e-11 65.5
MS.gene25396.t1 MTR_3g109982 33.333 207 109 10 7 212 13 191 5.24e-11 65.5
MS.gene25396.t1 MTR_1g095750 42.353 85 41 3 2 85 41 118 8.51e-11 60.5
MS.gene25396.t1 MTR_2g082850 26.852 216 142 7 1 214 16 217 8.56e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25396.t1 AT4G10400 29.605 456 260 20 7 450 2 408 7.63e-27 112
MS.gene25396.t1 AT4G10400 29.605 456 260 20 7 450 2 408 7.63e-27 112
MS.gene25396.t1 AT4G10400 29.605 456 260 20 7 450 2 408 7.63e-27 112
MS.gene25396.t1 AT4G26340 27.848 474 257 18 7 451 2 419 5.98e-25 107
MS.gene25396.t1 AT1G16930 27.235 481 272 18 5 451 13 449 1.26e-23 103
MS.gene25396.t1 AT1G16930 27.235 481 272 18 5 451 13 449 1.26e-23 103
MS.gene25396.t1 AT1G16930 27.235 481 272 18 5 451 13 449 1.26e-23 103
MS.gene25396.t1 AT5G53840 28.233 464 275 18 7 452 18 441 3.40e-23 102
MS.gene25396.t1 AT5G56420 27.273 462 274 17 7 451 6 422 3.42e-23 101
MS.gene25396.t1 AT5G56420 27.273 462 274 17 7 451 6 422 3.42e-23 101
MS.gene25396.t1 AT5G56420 27.273 462 274 17 7 451 6 422 3.42e-23 101
MS.gene25396.t1 AT4G09920 34.348 230 124 9 7 233 2 207 2.73e-22 97.1
MS.gene25396.t1 AT4G09920 34.348 230 124 9 7 233 2 207 2.73e-22 97.1
MS.gene25396.t1 AT4G09920 34.348 230 124 9 7 233 2 207 2.73e-22 97.1
MS.gene25396.t1 AT4G09920 34.348 230 124 9 7 233 2 207 3.67e-22 97.1
MS.gene25396.t1 AT4G09920 34.348 230 124 9 7 233 2 207 3.67e-22 97.1
MS.gene25396.t1 AT4G26350 26.907 472 273 20 7 451 2 428 1.54e-20 94.0
MS.gene25396.t1 AT3G42770 27.840 449 278 13 9 443 1 417 6.04e-20 92.8
MS.gene25396.t1 AT5G22730 24.788 472 289 17 7 448 28 463 2.55e-19 90.5
MS.gene25396.t1 AT5G22730 24.788 472 289 17 7 448 28 463 2.55e-19 90.5
MS.gene25396.t1 AT5G22720 24.583 480 288 14 7 450 23 464 6.46e-19 89.4
MS.gene25396.t1 AT2G26860 29.040 427 240 16 7 410 2 388 7.60e-19 88.6
MS.gene25396.t1 AT2G26860 29.040 427 240 16 7 410 2 388 7.60e-19 88.6
MS.gene25396.t1 AT1G69630 25.690 471 283 18 6 448 17 448 8.55e-19 89.0
MS.gene25396.t1 AT1G06630 30.000 230 142 6 7 233 12 225 1.90e-18 86.3
MS.gene25396.t1 AT1G06630 30.000 230 142 6 7 233 12 225 2.81e-18 86.3
MS.gene25396.t1 AT1G06630 30.000 230 142 6 7 233 12 225 2.81e-18 86.3
MS.gene25396.t1 AT3G59200 32.864 213 112 8 5 210 5 193 3.13e-18 86.3
MS.gene25396.t1 AT4G13985 24.842 475 289 18 6 448 18 456 3.28e-18 87.0
MS.gene25396.t1 AT1G06630 28.369 282 170 9 7 279 12 270 4.05e-18 86.7
MS.gene25396.t1 AT1G06630 28.369 282 170 9 7 279 12 270 4.05e-18 86.7
MS.gene25396.t1 AT1G06630 28.369 282 170 9 7 279 12 270 4.05e-18 86.7
MS.gene25396.t1 AT1G06630 28.369 282 170 9 7 279 12 270 4.05e-18 86.7
MS.gene25396.t1 AT1G06630 28.369 282 170 9 7 279 21 279 4.31e-18 86.7
MS.gene25396.t1 AT3G59200 32.075 212 115 7 5 210 5 193 7.07e-18 86.7
MS.gene25396.t1 AT1G06630 30.000 230 142 6 7 233 12 225 9.10e-18 85.9
MS.gene25396.t1 AT4G00315 27.234 470 285 19 7 450 2 440 1.33e-17 85.1
MS.gene25396.t1 AT3G44060 25.272 459 291 14 9 450 1 424 1.50e-17 85.1
MS.gene25396.t1 AT2G26030 24.532 481 283 21 7 448 4 443 3.77e-17 84.0
MS.gene25396.t1 AT5G44950 25.974 462 281 22 7 442 4 430 4.91e-17 83.6
MS.gene25396.t1 AT5G60610 26.353 425 254 16 7 415 2 383 5.27e-17 83.2
MS.gene25396.t1 AT5G60610 26.353 425 254 16 7 415 2 383 5.27e-17 83.2
MS.gene25396.t1 AT5G56400 24.946 465 291 17 5 451 31 455 1.64e-16 82.0
MS.gene25396.t1 AT5G56560 26.419 458 278 17 8 451 6 418 2.25e-16 81.3
MS.gene25396.t1 AT3G50710 24.947 469 285 16 7 451 2 427 3.24e-16 80.9
MS.gene25396.t1 AT1G32375 26.250 480 260 23 7 451 2 422 4.22e-16 80.5
MS.gene25396.t1 AT1G32375 26.250 480 260 23 7 451 2 422 4.22e-16 80.5
MS.gene25396.t1 AT3G44810 32.800 250 138 12 1 240 1 230 4.39e-16 80.5
MS.gene25396.t1 AT1G05080 26.180 466 282 17 7 450 13 438 5.95e-16 80.1
MS.gene25396.t1 AT3G60040 26.995 426 236 17 7 400 230 612 6.46e-16 80.9
MS.gene25396.t1 AT5G22610 23.467 473 288 16 7 455 18 440 6.48e-16 80.1
MS.gene25396.t1 AT3G60040 26.995 426 236 17 7 400 232 614 7.53e-16 80.5
MS.gene25396.t1 AT3G60040 26.869 428 238 17 5 400 11 395 8.02e-16 80.5
MS.gene25396.t1 AT3G60040 26.869 428 238 17 5 400 231 615 9.08e-16 80.5
MS.gene25396.t1 AT3G60040 26.869 428 238 17 5 400 230 614 1.19e-15 80.1
MS.gene25396.t1 AT5G56440 33.333 204 113 7 7 210 2 182 1.99e-15 78.6
MS.gene25396.t1 AT5G22610 22.887 485 306 16 7 455 18 470 2.35e-15 78.6
MS.gene25396.t1 AT1G13780 24.370 476 299 19 4 448 7 452 4.26e-15 77.8
MS.gene25396.t1 AT5G53635 25.053 471 277 19 9 450 2 425 4.28e-15 77.4
MS.gene25396.t1 AT5G50270 27.273 429 259 15 7 418 2 394 5.78e-15 77.0
MS.gene25396.t1 AT4G00160 27.004 474 276 20 7 453 16 446 9.20e-15 76.6
MS.gene25396.t1 AT4G13965 27.273 462 267 23 6 448 9 420 1.06e-14 76.3
MS.gene25396.t1 AT3G59190 33.333 180 107 5 1 175 6 177 1.78e-14 75.5
MS.gene25396.t1 AT3G59190 33.333 180 107 5 1 175 6 177 1.82e-14 75.9
MS.gene25396.t1 AT5G56370 24.733 469 278 17 7 450 2 420 2.06e-14 75.5
MS.gene25396.t1 AT5G56370 24.733 469 278 17 7 450 2 420 2.06e-14 75.5
MS.gene25396.t1 AT3G52680 27.893 484 257 19 7 453 21 449 2.58e-14 75.1
MS.gene25396.t1 AT5G22670 26.009 446 244 19 5 413 9 405 3.44e-14 74.7
MS.gene25396.t1 AT5G56410 27.356 435 252 16 14 418 10 410 6.93e-14 73.9
MS.gene25396.t1 AT1G66310 26.383 470 271 20 6 448 18 439 1.50e-13 72.8
MS.gene25396.t1 AT4G14103 29.707 239 136 9 7 240 8 219 2.81e-13 72.0
MS.gene25396.t1 AT5G22660 24.481 482 273 19 7 448 13 443 3.66e-13 71.6
MS.gene25396.t1 AT5G38590 24.672 458 259 19 7 436 2 401 3.72e-13 71.2
MS.gene25396.t1 AT4G14103 29.707 239 136 9 7 240 8 219 4.24e-13 70.9
MS.gene25396.t1 AT4G14103 29.707 239 136 9 7 240 8 219 4.24e-13 70.9
MS.gene25396.t1 AT4G15060 32.039 206 116 8 7 210 26 209 7.03e-13 70.5
MS.gene25396.t1 AT4G15060 32.524 206 115 8 7 210 172 355 9.24e-13 70.5
MS.gene25396.t1 AT3G58920 26.515 396 218 16 7 359 2 367 1.02e-12 70.5
MS.gene25396.t1 AT4G14096 28.326 233 138 10 7 234 8 216 3.09e-12 68.9
MS.gene25396.t1 AT4G14096 28.326 233 138 10 7 234 8 216 3.09e-12 68.9
MS.gene25396.t1 AT2G42720 32.547 212 112 8 7 210 2 190 3.21e-12 68.6
MS.gene25396.t1 AT3G52680 33.981 206 109 9 7 210 21 201 6.35e-12 67.4
MS.gene25396.t1 AT5G38392 32.743 226 117 11 7 219 2 205 7.15e-12 65.1
MS.gene25396.t1 AT5G62970 24.635 479 279 18 14 450 10 448 1.29e-11 66.6
MS.gene25396.t1 AT5G18780 24.353 464 293 15 7 448 11 438 1.78e-11 66.2
MS.gene25396.t1 AT5G18780 24.353 464 293 15 7 448 11 438 1.78e-11 66.2
MS.gene25396.t1 AT3G14710 24.362 431 264 17 7 418 26 413 1.97e-11 66.2
MS.gene25396.t1 AT5G41840 27.778 216 129 8 5 210 12 210 2.07e-11 66.2
MS.gene25396.t1 AT3G26922 26.667 270 133 10 7 243 14 251 2.53e-11 65.1
MS.gene25396.t1 AT3G26922 26.667 270 133 10 7 243 14 251 2.53e-11 65.1
MS.gene25396.t1 AT1G80470 24.520 469 280 21 6 448 14 434 2.81e-11 65.9
MS.gene25396.t1 AT5G22730 25.066 379 225 15 7 357 28 375 3.97e-11 65.1
MS.gene25396.t1 AT5G41630 28.241 216 121 9 7 210 12 205 5.35e-11 65.1
MS.gene25396.t1 AT5G38590 27.211 294 151 13 7 279 2 253 6.28e-11 63.5
MS.gene25396.t1 AT3G26930 28.270 474 266 22 7 454 21 446 7.67e-11 64.3

Find 110 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTCCCATGTTCTTAA+AGG 0.198525 8.2:-40095173 None:intergenic
TGATGTAAATTGCAAAATTC+TGG 0.267891 8.2:-40094931 None:intergenic
TTCAAGAGGTTGAAATTAAC+TGG 0.271024 8.2:+40094559 MS.gene25396:CDS
AAACGAGATGGGTGCAATTA+AGG 0.284744 8.2:-40093473 None:intergenic
GCAAACCTTCTGAACATTCT+TGG 0.285980 8.2:-40093243 None:intergenic
AGTTGGGATTTGAAACATTT+AGG 0.292395 8.2:-40095209 None:intergenic
TAGAACAGTTCTTGTTAGTT+AGG 0.297797 8.2:-40095352 None:intergenic
TTGGAAGGAAGGAGAGTATA+TGG 0.300204 8.2:-40093110 None:intergenic
TGATCAAGATTGGCAAGTTC+TGG 0.347551 8.2:+40093437 MS.gene25396:CDS
TCATTACTTGTCTTTCTCTC+TGG 0.347561 8.2:+40094463 MS.gene25396:CDS
CTCAGCTACCTCCGAAATAA+TGG 0.349487 8.2:+40094751 MS.gene25396:CDS
CGTCGTCGCCACGGAAGTTC+TGG 0.350205 8.2:-40093133 None:intergenic
CTGACCTTTATTCACATAGA+AGG 0.373907 8.2:+40095230 MS.gene25396:CDS
GATGTATATCACCATTATTT+CGG 0.382996 8.2:-40094762 None:intergenic
AATTCTGGATAATTTAGAAC+AGG 0.399159 8.2:-40094916 None:intergenic
TAACTGGCGTAAATTTCTCT+TGG 0.403021 8.2:+40094575 MS.gene25396:CDS
ATATCCTTCTATGTGAATAA+AGG 0.410094 8.2:-40095234 None:intergenic
GTAGCGATTGCTTTGAGGTA+TGG 0.412346 8.2:+40093358 MS.gene25396:CDS
CCTCCGTGAAAGTGAATTTG+TGG 0.417614 8.2:+40094720 MS.gene25396:CDS
TAGCGATTGCTTTGAGGTAT+GGG 0.422668 8.2:+40093359 MS.gene25396:CDS
TTAGGAACTGTTGTTGACTT+TGG 0.424286 8.2:-40095191 None:intergenic
AAAACCACATTGGGCATCAT+TGG 0.426834 8.2:+40094655 MS.gene25396:CDS
TATGGGTCCGTGCTGCCATT+GGG 0.427675 8.2:+40093376 MS.gene25396:CDS
TTGAATACTGTGATCAAGAT+TGG 0.431394 8.2:+40093427 MS.gene25396:CDS
GATTCAGCTGTGTCTCCATA+AGG 0.432456 8.2:+40095428 MS.gene25396:CDS
GTATGGGTCCGTGCTGCCAT+TGG 0.438183 8.2:+40093375 MS.gene25396:CDS
GTTTCGTAGCGATTGCTTTG+AGG 0.439746 8.2:+40093353 MS.gene25396:CDS
GGAAGGAGAGTATATGGAAG+AGG 0.441906 8.2:-40093104 None:intergenic
CAGTGTCACCTTTCTTCAAG+AGG 0.445176 8.2:+40094545 MS.gene25396:CDS
ATTCACATAGAAGGATATCA+AGG 0.454447 8.2:+40095239 MS.gene25396:CDS
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8.2:-40095167 None:intergenic
ACTCACACGAAGACGGTAAA+CGG 0.459020 8.2:+40093220 MS.gene25396:CDS
CAGCTGAATCAAATTTAAGT+TGG 0.465585 8.2:-40095415 None:intergenic
AATTTCAACCTCTTGAAGAA+AGG 0.468007 8.2:-40094553 None:intergenic
CTCGCAGGTGGCGAAATCTC+TGG 0.470853 8.2:+40093166 MS.gene25396:CDS
AGTTTCAACATCTTCAATGA+TGG 0.471452 8.2:-40094373 None:intergenic
CAGAAGACTCATGTTGAAGC+AGG 0.473912 8.2:-40094971 None:intergenic
AGCACGGGCAAAACCACATT+GGG 0.482216 8.2:+40094646 MS.gene25396:CDS
GAAAGGTGACACTGGAACAT+TGG 0.484453 8.2:-40094536 None:intergenic
GAAACCAGTCATCATTCAAC+AGG 0.490993 8.2:-40093335 None:intergenic
ATCTTGATCACAGTATTCAA+TGG 0.506654 8.2:-40093424 None:intergenic
GCACCCATCTCGTTTCCCTC+AGG 0.507292 8.2:+40093481 MS.gene25396:CDS
ACCGTCTTCGTGTGAGTCGT+CGG 0.507464 8.2:-40093214 None:intergenic
TTTCGGAGGTAGCTGAGCAC+AGG 0.510489 8.2:-40094745 None:intergenic
GTCTTCAAATAGATTCTGAC+TGG 0.517364 8.2:+40094602 MS.gene25396:CDS
TATGTGAATAAAGGTCAGTT+GGG 0.518104 8.2:-40095225 None:intergenic
GGTCCACAAATTCACTTTCA+CGG 0.521103 8.2:-40094723 None:intergenic
GGAAGTTCTGGTTGGAAGGA+AGG 0.524129 8.2:-40093121 None:intergenic
ATATGGAAGAGGAGTGGATC+CGG 0.532379 8.2:-40093093 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8.2:+40095256 MS.gene25396:CDS
CAATCTAGAGTTTCGAGTAC+GGG 0.535175 8.2:-40094490 None:intergenic
GAGAGTATATGGAAGAGGAG+TGG 0.539108 8.2:-40093099 None:intergenic
CTATGTGAATAAAGGTCAGT+TGG 0.541124 8.2:-40095226 None:intergenic
CTCTTGAAGAAAGGTGACAC+TGG 0.543764 8.2:-40094544 None:intergenic
ACAATCTAGAGTTTCGAGTA+CGG 0.545191 8.2:-40094491 None:intergenic
TTCTTCAAGTTGAGGCCCAA+TGG 0.546289 8.2:-40093391 None:intergenic
GTCATCATTCAACAGGCCGC+TGG 0.548538 8.2:-40093328 None:intergenic
AACCATCACCTTTAAGAACA+TGG 0.553947 8.2:+40095165 MS.gene25396:CDS
CGGTAGAGTGCTTAATCTGT+CGG 0.557544 8.2:-40093073 None:intergenic
CACAAATTCACTTTCACGGA+GGG 0.558062 8.2:-40094719 None:intergenic
CCACGGAAGTTCTGGTTGGA+AGG 0.559296 8.2:-40093125 None:intergenic
CGACAGATTAAGCACTCTAC+CGG 0.560939 8.2:+40093074 MS.gene25396:CDS
TATGCGTCATTTCACATCAA+AGG 0.563852 8.2:+40094789 MS.gene25396:CDS
CATTGGAAACTTGCAGAGTG+TGG 0.571216 8.2:+40094672 MS.gene25396:CDS
GTTACCTGAGGGAAACGAGA+TGG 0.571676 8.2:-40093485 None:intergenic
GTCGCCACGGAAGTTCTGGT+TGG 0.573437 8.2:-40093129 None:intergenic
GATGGAAGATGAATTGAAGA+AGG 0.577459 8.2:-40094355 None:intergenic
CTTAATCTGTCGGTGGTCGG+CGG 0.577807 8.2:-40093063 None:intergenic
GAAACTCGGCGCAGGTGTTG+TGG 0.579352 8.2:+40094390 MS.gene25396:CDS
GTGCTTAATCTGTCGGTGGT+CGG 0.579525 8.2:-40093066 None:intergenic
TTACCTGAGGGAAACGAGAT+GGG 0.580084 8.2:-40093484 None:intergenic
TAATGTCGCGGGATCGACGG+AGG 0.582154 8.2:-40093290 None:intergenic
CGACGAGTCTCATCTCTCGC+AGG 0.586679 8.2:+40093151 MS.gene25396:CDS
ACAAACAGTTCTTCAAGTTG+AGG 0.586776 8.2:-40093399 None:intergenic
GCGGCCTGTTGAATGATGAC+TGG 0.596567 8.2:+40093331 MS.gene25396:CDS
AAGATGTTGAAACTCGGCGC+AGG 0.597067 8.2:+40094382 MS.gene25396:CDS
ACCATCACCTTTAAGAACAT+GGG 0.597069 8.2:+40095166 MS.gene25396:CDS
GATGAGACTCGTCGTCGCCA+CGG 0.598805 8.2:-40093142 None:intergenic
CCTTCCAACCAGAACTTCCG+TGG 0.599187 8.2:+40093125 MS.gene25396:CDS
AACGGCCAAGAATGTTCAGA+AGG 0.599711 8.2:+40093238 MS.gene25396:CDS
TCTCTTAATTCAGAGTAGCA+AGG 0.599848 8.2:+40095029 MS.gene25396:CDS
GGTGTTGTGGAATTCGACAT+AGG 0.601089 8.2:+40094403 MS.gene25396:CDS
AAGATTAACTGATATACCAA+GGG 0.602286 8.2:+40095379 MS.gene25396:CDS
GTGCAATTAAGGAGAGAAGA+AGG 0.603494 8.2:-40093462 None:intergenic
GTAGACGACAGTCGTAGCAC+GGG 0.604782 8.2:+40094631 MS.gene25396:CDS
TGTAGACGACAGTCGTAGCA+CGG 0.604863 8.2:+40094630 MS.gene25396:CDS
TAGCACGGGCAAAACCACAT+TGG 0.607098 8.2:+40094645 MS.gene25396:CDS
TGGCATGTGACAGAGCCCCT+TGG 0.611510 8.2:-40095395 None:intergenic
GAAGATTAACTGATATACCA+AGG 0.613068 8.2:+40095378 MS.gene25396:CDS
AATGTCGCGGGATCGACGGA+GGG 0.613106 8.2:-40093289 None:intergenic
TTCGGAGGTAGCTGAGCACA+GGG 0.616465 8.2:-40094744 None:intergenic
GGATCGACGGAGGGAGAGCA+CGG 0.617495 8.2:-40093280 None:intergenic
AGAAGACTCATGTTGAAGCA+GGG 0.620873 8.2:-40094970 None:intergenic
GTATATCACCATTATTTCGG+AGG 0.623940 8.2:-40094759 None:intergenic
TTCTGGATAATTTAGAACAG+GGG 0.624941 8.2:-40094914 None:intergenic
GTTGAGGCCCAATGGCAGCA+CGG 0.625930 8.2:-40093383 None:intergenic
ATTCTGGATAATTTAGAACA+GGG 0.628560 8.2:-40094915 None:intergenic
TCCGACGACTCACACGAAGA+CGG 0.629290 8.2:+40093213 MS.gene25396:CDS
TCATTGAAGATGTTGAAACT+CGG 0.641916 8.2:+40094376 MS.gene25396:CDS
TTTAGAACAGGGGTGCGAAG+TGG 0.642724 8.2:-40094904 None:intergenic
TGAGTCGTCGGAGAATTCGA+AGG 0.644607 8.2:-40093202 None:intergenic
TGGAAACTTGCAGAGTGTGG+AGG 0.645099 8.2:+40094675 MS.gene25396:CDS
GTTTCCAATGATGCCCAATG+TGG 0.653602 8.2:-40094659 None:intergenic
AATCTAGAGTTTCGAGTACG+GGG 0.656709 8.2:-40094489 None:intergenic
TAGAGTGCTTAATCTGTCGG+TGG 0.661153 8.2:-40093070 None:intergenic
CGAGTCTCATCTCTCGCAGG+TGG 0.671427 8.2:+40093154 MS.gene25396:CDS
CCACAAATTCACTTTCACGG+AGG 0.721101 8.2:-40094720 None:intergenic
AGATTAACTGATATACCAAG+GGG 0.721766 8.2:+40095380 MS.gene25396:CDS
ATTCGACAACATAGACACTG+TGG 0.735102 8.2:+40094438 MS.gene25396:CDS
ATTCGACATAGGCAACACTG+TGG 0.759166 8.2:+40094414 MS.gene25396:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATATGCAAAATT+AGG + chr8.2:40093687-40093706 MS.gene25396:intron 10.0%
!!! GCTTTATTTAAATTAATTTT+TGG + chr8.2:40095055-40095074 MS.gene25396:intron 10.0%
!! TTGAAACTAAAAAAACTAAA+AGG + chr8.2:40093917-40093936 MS.gene25396:intron 15.0%
!! TTTATAGTTTATAATGTTGT+AGG + chr8.2:40093662-40093681 MS.gene25396:intron 15.0%
!!! TAGTTTTTTTAGTTTCAAAT+TGG - chr8.2:40093915-40093934 None:intergenic 15.0%
!!! TTTTAACAATATCCAAAATT+TGG + chr8.2:40094211-40094230 MS.gene25396:intron 15.0%
!! GTTACAAAAAAGAAAATTAG+AGG + chr8.2:40093857-40093876 MS.gene25396:intron 20.0%
!!! AAGGTGAAGTTTTATTATTA+TGG + chr8.2:40094808-40094827 MS.gene25396:intron 20.0%
!!! ATTTCGCTTATTTTTTATGT+TGG + chr8.2:40093982-40094001 MS.gene25396:intron 20.0%
!!! ATTTGATTTGCTAAAATACA+GGG - chr8.2:40094161-40094180 None:intergenic 20.0%
!!! TTTTATGTTGGCAAATAAAA+TGG + chr8.2:40093994-40094013 MS.gene25396:intron 20.0%
! AAAAACTAAAAGGACTAATC+TGG + chr8.2:40093927-40093946 MS.gene25396:intron 25.0%
! AAGATTAACTGATATACCAA+GGG + chr8.2:40095379-40095398 MS.gene25396:CDS 25.0%
! ATATCCTTCTATGTGAATAA+AGG - chr8.2:40095237-40095256 None:intergenic 25.0%
! GAAAATGTATGTAAGTAATC+AGG + chr8.2:40093733-40093752 MS.gene25396:intron 25.0%
! GATGTATATCACCATTATTT+CGG - chr8.2:40094765-40094784 None:intergenic 25.0%
! TGATGTAAATTGCAAAATTC+TGG - chr8.2:40094934-40094953 None:intergenic 25.0%
! TTGATTTAGAAACTGATCAT+GGG - chr8.2:40094107-40094126 None:intergenic 25.0%
!! AATTCTGGATAATTTAGAAC+AGG - chr8.2:40094919-40094938 None:intergenic 25.0%
!! ATTCTGGATAATTTAGAACA+GGG - chr8.2:40094918-40094937 None:intergenic 25.0%
!! ATTTTCGAAAATATGTACTC+TGG + chr8.2:40094026-40094045 MS.gene25396:intron 25.0%
!! TTGTAGGTTTGAAATAAACT+CGG + chr8.2:40093519-40093538 MS.gene25396:intron 25.0%
!!! CATTTGATTTGCTAAAATAC+AGG - chr8.2:40094162-40094181 None:intergenic 25.0%
AATTTCAACCTCTTGAAGAA+AGG - chr8.2:40094556-40094575 None:intergenic 30.0%
AGAGAGAGATATACATACAT+AGG - chr8.2:40095089-40095108 None:intergenic 30.0%
AGATTAACTGATATACCAAG+GGG + chr8.2:40095380-40095399 MS.gene25396:CDS 30.0%
AGTTTCAACATCTTCAATGA+TGG - chr8.2:40094376-40094395 None:intergenic 30.0%
ATCTTGATCACAGTATTCAA+TGG - chr8.2:40093427-40093446 None:intergenic 30.0%
ATTCACATAGAAGGATATCA+AGG + chr8.2:40095239-40095258 MS.gene25396:CDS 30.0%
CAGCTGAATCAAATTTAAGT+TGG - chr8.2:40095418-40095437 None:intergenic 30.0%
GAAGATTAACTGATATACCA+AGG + chr8.2:40095378-40095397 MS.gene25396:CDS 30.0%
GATCAGTTTCTAAATCAACA+GGG + chr8.2:40094109-40094128 MS.gene25396:intron 30.0%
TAAAATCCTGAGATGCATTT+GGG + chr8.2:40093959-40093978 MS.gene25396:intron 30.0%
TAGAACAGTTCTTGTTAGTT+AGG - chr8.2:40095355-40095374 None:intergenic 30.0%
TATGTGAATAAAGGTCAGTT+GGG - chr8.2:40095228-40095247 None:intergenic 30.0%
TCATTGAAGATGTTGAAACT+CGG + chr8.2:40094376-40094395 MS.gene25396:CDS 30.0%
TGATCAGTTTCTAAATCAAC+AGG + chr8.2:40094108-40094127 MS.gene25396:intron 30.0%
TGTATGTAAGTAATCAGGTT+TGG + chr8.2:40093738-40093757 MS.gene25396:intron 30.0%
TTAAAATCCTGAGATGCATT+TGG + chr8.2:40093958-40093977 MS.gene25396:intron 30.0%
TTCAAGAGGTTGAAATTAAC+TGG + chr8.2:40094559-40094578 MS.gene25396:CDS 30.0%
TTGAATACTGTGATCAAGAT+TGG + chr8.2:40093427-40093446 MS.gene25396:CDS 30.0%
! AGTTGGGATTTGAAACATTT+AGG - chr8.2:40095212-40095231 None:intergenic 30.0%
! GTTCAATTTTACTGACAGTA+AGG + chr8.2:40093888-40093907 MS.gene25396:intron 30.0%
! GTTGATTTAGAAACTGATCA+TGG - chr8.2:40094108-40094127 None:intergenic 30.0%
! TCATGAAAGCAACCAAATTT+TGG - chr8.2:40094226-40094245 None:intergenic 30.0%
! TTCTGGATAATTTAGAACAG+GGG - chr8.2:40094917-40094936 None:intergenic 30.0%
!! CATCCAACTTTGTTGTTAAA+GGG - chr8.2:40093818-40093837 None:intergenic 30.0%
!! CATTTGCTGAATATGTTTTG+CGG + chr8.2:40095279-40095298 MS.gene25396:CDS 30.0%
!! CGGTTAAAAAGTGTTTATGT+GGG + chr8.2:40093539-40093558 MS.gene25396:intron 30.0%
!! TCATCCAACTTTGTTGTTAA+AGG - chr8.2:40093819-40093838 None:intergenic 30.0%
!! TCGGTTAAAAAGTGTTTATG+TGG + chr8.2:40093538-40093557 MS.gene25396:intron 30.0%
!!! CGTTTTTTTCGATACATCAA+TGG + chr8.2:40095328-40095347 MS.gene25396:CDS 30.0%
!!! TTGGTGTCATAAACACTTTT+TGG + chr8.2:40093757-40093776 MS.gene25396:intron 30.0%
AATTCACCGCTCTCAATAAT+AGG + chr8.2:40093588-40093607 MS.gene25396:intron 35.0%
AGAATCTTGCCAAATTCATG+AGG - chr8.2:40094187-40094206 None:intergenic 35.0%
ATCAACCCTATTATTGAGAG+CGG - chr8.2:40093597-40093616 None:intergenic 35.0%
ATTCACCGCTCTCAATAATA+GGG + chr8.2:40093589-40093608 MS.gene25396:intron 35.0%
CTATGTGAATAAAGGTCAGT+TGG - chr8.2:40095229-40095248 None:intergenic 35.0%
CTGACCTTTATTCACATAGA+AGG + chr8.2:40095230-40095249 MS.gene25396:CDS 35.0%
GATGGAAGATGAATTGAAGA+AGG - chr8.2:40094358-40094377 None:intergenic 35.0%
GTATATCACCATTATTTCGG+AGG - chr8.2:40094762-40094781 None:intergenic 35.0%
GTCTTCAAATAGATTCTGAC+TGG + chr8.2:40094602-40094621 MS.gene25396:CDS 35.0%
TAACTGGCGTAAATTTCTCT+TGG + chr8.2:40094575-40094594 MS.gene25396:CDS 35.0%
TATGCGTCATTTCACATCAA+AGG + chr8.2:40094789-40094808 MS.gene25396:CDS 35.0%
TCAAATGCACCTCATGAATT+TGG + chr8.2:40094175-40094194 MS.gene25396:intron 35.0%
TCATTACTTGTCTTTCTCTC+TGG + chr8.2:40094463-40094482 MS.gene25396:CDS 35.0%
TCTCTTAATTCAGAGTAGCA+AGG + chr8.2:40095029-40095048 MS.gene25396:CDS 35.0%
TTTGCTAAAATACAGGGAAC+TGG - chr8.2:40094155-40094174 None:intergenic 35.0%
! AACCATCACCTTTAAGAACA+TGG + chr8.2:40095165-40095184 MS.gene25396:CDS 35.0%
! ACAATCTAGAGTTTCGAGTA+CGG - chr8.2:40094494-40094513 None:intergenic 35.0%
! ACCATCACCTTTAAGAACAT+GGG + chr8.2:40095166-40095185 MS.gene25396:CDS 35.0%
! ACGAAACTTTTTAATGTCGC+GGG - chr8.2:40093304-40093323 None:intergenic 35.0%
! CTCTCAATAATAGGGTTGAT+AGG + chr8.2:40093597-40093616 MS.gene25396:intron 35.0%
! GACGAAACTTTTTAATGTCG+CGG - chr8.2:40093305-40093324 None:intergenic 35.0%
! TGAAAAAACTGCAGTCTTGT+TGG + chr8.2:40094310-40094329 MS.gene25396:intron 35.0%
!! AAACACTTTTTGGACGTTGT+AGG + chr8.2:40093767-40093786 MS.gene25396:intron 35.0%
!! ACAAACAGTTCTTCAAGTTG+AGG - chr8.2:40093402-40093421 None:intergenic 35.0%
!! CGTTGTAGGTAAGCTTTAAA+CGG + chr8.2:40093781-40093800 MS.gene25396:intron 35.0%
!! TGTCTTTTGTGCTAGTTTCT+TGG + chr8.2:40094513-40094532 MS.gene25396:CDS 35.0%
!! TTAGGAACTGTTGTTGACTT+TGG - chr8.2:40095194-40095213 None:intergenic 35.0%
AAAAAGTTTCGTCTCACCAG+CGG + chr8.2:40093312-40093331 MS.gene25396:CDS 40.0%
AAAACCACATTGGGCATCAT+TGG + chr8.2:40094655-40094674 MS.gene25396:CDS 40.0%
AAACGAGATGGGTGCAATTA+AGG - chr8.2:40093476-40093495 None:intergenic 40.0%
AGAAGACTCATGTTGAAGCA+GGG - chr8.2:40094973-40094992 None:intergenic 40.0%
ATTCGACAACATAGACACTG+TGG + chr8.2:40094438-40094457 MS.gene25396:CDS 40.0%
CAAACCTACAACAACGAGTA+GGG - chr8.2:40093510-40093529 None:intergenic 40.0%
CACAAATTCACTTTCACGGA+GGG - chr8.2:40094722-40094741 None:intergenic 40.0%
CTGGTCAAAATGTTGTCACA+TGG + chr8.2:40094045-40094064 MS.gene25396:intron 40.0%
GAAACCAGTCATCATTCAAC+AGG - chr8.2:40093338-40093357 None:intergenic 40.0%
GCAAACCTTCTGAACATTCT+TGG - chr8.2:40093246-40093265 None:intergenic 40.0%
GCACCCTTTAACAACAAAGT+TGG + chr8.2:40093812-40093831 MS.gene25396:intron 40.0%
GCGCTTATCGATAAGTTTGT+AGG + chr8.2:40093561-40093580 MS.gene25396:intron 40.0%
GGTCCACAAATTCACTTTCA+CGG - chr8.2:40094726-40094745 None:intergenic 40.0%
GTACGCATAATCACAAGTGA+TGG - chr8.2:40094875-40094894 None:intergenic 40.0%
GTGCAATTAAGGAGAGAAGA+AGG - chr8.2:40093465-40093484 None:intergenic 40.0%
TCAAACCTACAACAACGAGT+AGG - chr8.2:40093511-40093530 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG + chr8.2:40095256-40095275 MS.gene25396:CDS 40.0%
TCCCATGTTCTTAAAGGTGA+TGG - chr8.2:40095170-40095189 None:intergenic 40.0%
TGATCAAGATTGGCAAGTTC+TGG + chr8.2:40093437-40093456 MS.gene25396:CDS 40.0%
! AATCTAGAGTTTCGAGTACG+GGG - chr8.2:40094492-40094511 None:intergenic 40.0%
! CAATCTAGAGTTTCGAGTAC+GGG - chr8.2:40094493-40094512 None:intergenic 40.0%
! GCTGAATATGTTTTGCGGAA+CGG + chr8.2:40095284-40095303 MS.gene25396:CDS 40.0%
! TTGGAAGGAAGGAGAGTATA+TGG - chr8.2:40093113-40093132 None:intergenic 40.0%
! TTTGGCTCCCATGTTCTTAA+AGG - chr8.2:40095176-40095195 None:intergenic 40.0%
!! TAGCGATTGCTTTGAGGTAT+GGG + chr8.2:40093359-40093378 MS.gene25396:CDS 40.0%
AACGGCCAAGAATGTTCAGA+AGG + chr8.2:40093238-40093257 MS.gene25396:CDS 45.0%
ACTCACACGAAGACGGTAAA+CGG + chr8.2:40093220-40093239 MS.gene25396:CDS 45.0%
ATATGGAAGAGGAGTGGATC+CGG - chr8.2:40093096-40093115 None:intergenic 45.0%
ATTCGACATAGGCAACACTG+TGG + chr8.2:40094414-40094433 MS.gene25396:CDS 45.0%
CAGAAGACTCATGTTGAAGC+AGG - chr8.2:40094974-40094993 None:intergenic 45.0%
CAGTGTCACCTTTCTTCAAG+AGG + chr8.2:40094545-40094564 MS.gene25396:CDS 45.0%
CATTGGAAACTTGCAGAGTG+TGG + chr8.2:40094672-40094691 MS.gene25396:CDS 45.0%
CCACAAATTCACTTTCACGG+AGG - chr8.2:40094723-40094742 None:intergenic 45.0%
CCTCCGTGAAAGTGAATTTG+TGG + chr8.2:40094720-40094739 MS.gene25396:CDS 45.0%
CGAAATCCCAAATGCATCTC+AGG - chr8.2:40093968-40093987 None:intergenic 45.0%
CGACAGATTAAGCACTCTAC+CGG + chr8.2:40093074-40093093 MS.gene25396:CDS 45.0%
CTCAGCTACCTCCGAAATAA+TGG + chr8.2:40094751-40094770 MS.gene25396:CDS 45.0%
CTCTTGAAGAAAGGTGACAC+TGG - chr8.2:40094547-40094566 None:intergenic 45.0%
GAAAGGTGACACTGGAACAT+TGG - chr8.2:40094539-40094558 None:intergenic 45.0%
GTAACCCTACTCGTTGTTGT+AGG + chr8.2:40093503-40093522 MS.gene25396:intron 45.0%
GTGATTATGCGTACAAGCAG+CGG + chr8.2:40094881-40094900 MS.gene25396:intron 45.0%
GTTTCCAATGATGCCCAATG+TGG - chr8.2:40094662-40094681 None:intergenic 45.0%
GTTTCGTAGCGATTGCTTTG+AGG + chr8.2:40093353-40093372 MS.gene25396:CDS 45.0%
TCATGGGACTCGACAAAAAC+AGG - chr8.2:40094091-40094110 None:intergenic 45.0%
TTACCTGAGGGAAACGAGAT+GGG - chr8.2:40093487-40093506 None:intergenic 45.0%
! CGGTAGAGTGCTTAATCTGT+CGG - chr8.2:40093076-40093095 None:intergenic 45.0%
! GAGAGTATATGGAAGAGGAG+TGG - chr8.2:40093102-40093121 None:intergenic 45.0%
! GGAAGGAGAGTATATGGAAG+AGG - chr8.2:40093107-40093126 None:intergenic 45.0%
! GGTGTTGTGGAATTCGACAT+AGG + chr8.2:40094403-40094422 MS.gene25396:CDS 45.0%
! TAGAGTGCTTAATCTGTCGG+TGG - chr8.2:40093073-40093092 None:intergenic 45.0%
! TTTTAATGTCGCGGGATCGA+CGG - chr8.2:40093296-40093315 None:intergenic 45.0%
!! GGGTTGATAGGTGTATCAGT+CGG + chr8.2:40093609-40093628 MS.gene25396:intron 45.0%
!! GTAGCGATTGCTTTGAGGTA+TGG + chr8.2:40093358-40093377 MS.gene25396:CDS 45.0%
!! TTCTTCAAGTTGAGGCCCAA+TGG - chr8.2:40093394-40093413 None:intergenic 45.0%
AAGATGTTGAAACTCGGCGC+AGG + chr8.2:40094382-40094401 MS.gene25396:CDS 50.0%
ACAACGAGTAGGGTTACCTG+AGG - chr8.2:40093500-40093519 None:intergenic 50.0%
AGCACGGGCAAAACCACATT+GGG + chr8.2:40094646-40094665 MS.gene25396:CDS 50.0%
CAACGAGTAGGGTTACCTGA+GGG - chr8.2:40093499-40093518 None:intergenic 50.0%
GTGCTTAATCTGTCGGTGGT+CGG - chr8.2:40093069-40093088 None:intergenic 50.0%
GTTACCTGAGGGAAACGAGA+TGG - chr8.2:40093488-40093507 None:intergenic 50.0%
GTTCCTCCTAGCAGCAACAA+GGG - chr8.2:40095148-40095167 None:intergenic 50.0%
TAGCACGGGCAAAACCACAT+TGG + chr8.2:40094645-40094664 MS.gene25396:CDS 50.0%
TGAGTCGTCGGAGAATTCGA+AGG - chr8.2:40093205-40093224 None:intergenic 50.0%
TGGAAACTTGCAGAGTGTGG+AGG + chr8.2:40094675-40094694 MS.gene25396:CDS 50.0%
TGTAGACGACAGTCGTAGCA+CGG + chr8.2:40094630-40094649 MS.gene25396:CDS 50.0%
! GGAAGTTCTGGTTGGAAGGA+AGG - chr8.2:40093124-40093143 None:intergenic 50.0%
! TTTAGAACAGGGGTGCGAAG+TGG - chr8.2:40094907-40094926 None:intergenic 50.0%
ACCGTCTTCGTGTGAGTCGT+CGG - chr8.2:40093217-40093236 None:intergenic 55.0%
CCTTCCAACCAGAACTTCCG+TGG + chr8.2:40093125-40093144 MS.gene25396:CDS 55.0%
CTTAATCTGTCGGTGGTCGG+CGG - chr8.2:40093066-40093085 None:intergenic 55.0%
GCGGCCTGTTGAATGATGAC+TGG + chr8.2:40093331-40093350 MS.gene25396:CDS 55.0%
GGTTCCTCCTAGCAGCAACA+AGG - chr8.2:40095149-40095168 None:intergenic 55.0%
GTAGACGACAGTCGTAGCAC+GGG + chr8.2:40094631-40094650 MS.gene25396:CDS 55.0%
GTCATCATTCAACAGGCCGC+TGG - chr8.2:40093331-40093350 None:intergenic 55.0%
TATGGGTCCGTGCTGCCATT+GGG + chr8.2:40093376-40093395 MS.gene25396:CDS 55.0%
TCCGACGACTCACACGAAGA+CGG + chr8.2:40093213-40093232 MS.gene25396:CDS 55.0%
TCGTGTCCCTTGTTGCTGCT+AGG + chr8.2:40095139-40095158 MS.gene25396:intron 55.0%
TGTCCCTTGTTGCTGCTAGG+AGG + chr8.2:40095142-40095161 MS.gene25396:intron 55.0%
TTCGGAGGTAGCTGAGCACA+GGG - chr8.2:40094747-40094766 None:intergenic 55.0%
TTTCGGAGGTAGCTGAGCAC+AGG - chr8.2:40094748-40094767 None:intergenic 55.0%
! CCACGGAAGTTCTGGTTGGA+AGG - chr8.2:40093128-40093147 None:intergenic 55.0%
AATGTCGCGGGATCGACGGA+GGG - chr8.2:40093292-40093311 None:intergenic 60.0%
CGACGAGTCTCATCTCTCGC+AGG + chr8.2:40093151-40093170 MS.gene25396:CDS 60.0%
CGAGTCTCATCTCTCGCAGG+TGG + chr8.2:40093154-40093173 MS.gene25396:CDS 60.0%
CTCGCAGGTGGCGAAATCTC+TGG + chr8.2:40093166-40093185 MS.gene25396:CDS 60.0%
GATGAGACTCGTCGTCGCCA+CGG - chr8.2:40093145-40093164 None:intergenic 60.0%
GCACCCATCTCGTTTCCCTC+AGG + chr8.2:40093481-40093500 MS.gene25396:CDS 60.0%
GTATGGGTCCGTGCTGCCAT+TGG + chr8.2:40093375-40093394 MS.gene25396:CDS 60.0%
GTTGAGGCCCAATGGCAGCA+CGG - chr8.2:40093386-40093405 None:intergenic 60.0%
TAATGTCGCGGGATCGACGG+AGG - chr8.2:40093293-40093312 None:intergenic 60.0%
TGGCATGTGACAGAGCCCCT+TGG - chr8.2:40095398-40095417 None:intergenic 60.0%
! GAAACTCGGCGCAGGTGTTG+TGG + chr8.2:40094390-40094409 MS.gene25396:CDS 60.0%
! GTCGCCACGGAAGTTCTGGT+TGG - chr8.2:40093132-40093151 None:intergenic 60.0%
CGTCGTCGCCACGGAAGTTC+TGG - chr8.2:40093136-40093155 None:intergenic 65.0%
GGATCGACGGAGGGAGAGCA+CGG - chr8.2:40093283-40093302 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 40093057 40095448 40093057 ID=MS.gene25396
chr8.2 mRNA 40093057 40095448 40093057 ID=MS.gene25396.t1;Parent=MS.gene25396
chr8.2 exon 40093057 40093502 40093057 ID=MS.gene25396.t1.exon1;Parent=MS.gene25396.t1
chr8.2 CDS 40093057 40093502 40093057 ID=cds.MS.gene25396.t1;Parent=MS.gene25396.t1
chr8.2 exon 40094324 40094810 40094324 ID=MS.gene25396.t1.exon2;Parent=MS.gene25396.t1
chr8.2 CDS 40094324 40094810 40094324 ID=cds.MS.gene25396.t1;Parent=MS.gene25396.t1
chr8.2 exon 40094901 40095050 40094901 ID=MS.gene25396.t1.exon3;Parent=MS.gene25396.t1
chr8.2 CDS 40094901 40095050 40094901 ID=cds.MS.gene25396.t1;Parent=MS.gene25396.t1
chr8.2 exon 40095161 40095448 40095161 ID=MS.gene25396.t1.exon4;Parent=MS.gene25396.t1
chr8.2 CDS 40095161 40095448 40095161 ID=cds.MS.gene25396.t1;Parent=MS.gene25396.t1
Gene Sequence

>MS.gene25396

ATGGCGCCGCCGACCACCGACAGATTAAGCACTCTACCGGATCCACTCCTCTTCCATATACTCTCCTTCCTTCCAACCAGAACTTCCGTGGCGACGACGAGTCTCATCTCTCGCAGGTGGCGAAATCTCTGGCAGAATCTACAAGCCTTCGAATTCTCCGACGACTCACACGAAGACGGTAAACGGCCAAGAATGTTCAGAAGGTTTGCATTCTTCGTCAACGCCGTGCTCTCCCTCCGTCGATCCCGCGACATTAAAAAGTTTCGTCTCACCAGCGGCCTGTTGAATGATGACTGGTTTCGTAGCGATTGCTTTGAGGTATGGGTCCGTGCTGCCATTGGGCCTCAACTTGAAGAACTGTTTGTTTCCATTGAATACTGTGATCAAGATTGGCAAGTTCTGGTTCCTTCTTCTCTCCTTAATTGCACCCATCTCGTTTCCCTCAGGTAACCCTACTCGTTGTTGTAGGTTTGAAATAAACTCGGTTAAAAAGTGTTTATGTGGGCGCTTATCGATAAGTTTGTAGGTCTAAATTCACCGCTCTCAATAATAGGGTTGATAGGTGTATCAGTCGGTTTTAGTTTGAAACAAAATTGATTACTTGATTTATAGTTTATAATGTTGTAGGTGAAATATTTATATGCAAAATTAGGATTGAATTGAGAAACAATGAGAAGAAAATGTATGTAAGTAATCAGGTTTGGTGTCATAAACACTTTTTGGACGTTGTAGGTAAGCTTTAAACGGTCATGTAAGCACCCTTTAACAACAAAGTTGGATGAAAAAAAAATGATCAATATGTTACAAAAAAGAAAATTAGAGGTCTAAGTTGTTCAATTTTACTGACAGTAAGGACCAATTTGAAACTAAAAAAACTAAAAGGACTAATCTGGTACAAACGTTAAAATCCTGAGATGCATTTGGGATTTCGCTTATTTTTTATGTTGGCAAATAAAATGGCATTTTGCTATTTTCGAAAATATGTACTCTGGTCAAAATGTTGTCACATGGTTTAGCGAGTGACAAGAATTCCTGTTTTTGTCGAGTCCCATGATCAGTTTCTAAATCAACAGGGTACAAAAAAAGTTGTGCAGTCCAGTTCCCTGTATTTTAGCAAATCAAATGCACCTCATGAATTTGGCAAGATTCTCACGTTTTAACAATATCCAAAATTTGGTTGCTTTCATGATTTCATCTCTTGTTCTCTCTCTGTTTTTAACATGTATATATAGAATGTTATGTAACATGTGTTTTGAAAAAACTGCAGTCTTGTTGGTGCAATTCATATAATGTTTCAACCTTCTTCAATTCATCTTCCATCATTGAAGATGTTGAAACTCGGCGCAGGTGTTGTGGAATTCGACATAGGCAACACTGTGGAATTCGACAACATAGACACTGTGGATTCATTACTTGTCTTTCTCTCTGGCTGCCCCGTACTCGAAACTCTAGATTGTGTCTTTTGTGCTAGTTTCTTGGCCAATGTTCCAGTGTCACCTTTCTTCAAGAGGTTGAAATTAACTGGCGTAAATTTCTCTTGGACTTGTCTTCAAATAGATTCTGACTGGCTCTGTGTAGACGACAGTCGTAGCACGGGCAAAACCACATTGGGCATCATTGGAAACTTGCAGAGTGTGGAGGAAGCATATTTTGATGTCTTTTCCCTCCGTGAAAGTGAATTTGTGGACCCTGTGCTCAGCTACCTCCGAAATAATGGTGATATACATCTACTTATGCGTCATTTCACATCAAAGGTGAAGTTTTATTATTATGGTTTATATGTATTTATATATGTACTTCTGTACTAATGTTGTGCCATCACTTGTGATTATGCGTACAAGCAGCGGCCACTTCGCACCCCTGTTCTAAATTATCCAGAATTTTGCAATTTACATCATCTAAAGTTCATTCTTCCCTGCTTCAACATGAGTCTTCTGCTCAACGTGCTTGAGAAATGTCATGTGCTTCAAGTTCTCTTAATTCAGAGTAGCAAGGTTTGCTTTATTTAAATTAATTTTTGGTCTATCTACCTATGTATGTATATCTCTCTCTCTCTATATACACACAAATATAATTGAGTCATCGTGTCCCTTGTTGCTGCTAGGAGGAACCATCACCTTTAAGAACATGGGAGCCAAAGTCAACAACAGTTCCTAAATGTTTCAAATCCCAACTGACCTTTATTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGCTGAATATGTTTTGCGGAACGGACTTGTTTTACACACAATGCTCGTTTTTTTCGATACATCAATGGACCTAACTAACAAGAACTGTTCTATCAGAAGATTAACTGATATACCAAGGGGCTCTGTCACATGCCAACTTAAATTTGATTCAGCTGTGTCTCCATAA

Protein sequence

>MS.gene25396.t1

MAPPTTDRLSTLPDPLLFHILSFLPTRTSVATTSLISRRWRNLWQNLQAFEFSDDSHEDGKRPRMFRRFAFFVNAVLSLRRSRDIKKFRLTSGLLNDDWFRSDCFEVWVRAAIGPQLEELFVSIEYCDQDWQVLVPSSLLNCTHLVSLSLVGAIHIMFQPSSIHLPSLKMLKLGAGVVEFDIGNTVEFDNIDTVDSLLVFLSGCPVLETLDCVFCASFLANVPVSPFFKRLKLTGVNFSWTCLQIDSDWLCVDDSRSTGKTTLGIIGNLQSVEEAYFDVFSLRESEFVDPVLSYLRNNGDIHLLMRHFTSKRPLRTPVLNYPEFCNLHHLKFILPCFNMSLLLNVLEKCHVLQVLLIQSSKEEPSPLRTWEPKSTTVPKCFKSQLTFIHIEGYQGFEDELAFAEYVLRNGLVLHTMLVFFDTSMDLTNKNCSIRRLTDIPRGSVTCQLKFDSAVSP