AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95710.t1 MTR_8g070950 91.176 442 37 1 1 442 1 440 0.0 799
MS.gene95710.t1 MTR_8g062010 62.723 448 135 11 9 440 3 434 1.50e-180 511
MS.gene95710.t1 MTR_8g062080 57.019 463 162 9 1 440 1 449 2.14e-169 483
MS.gene95710.t1 MTR_8g062310 59.535 430 150 8 15 441 25 433 7.35e-166 474
MS.gene95710.t1 MTR_8g058965 55.603 473 164 13 1 440 1 460 4.29e-158 455
MS.gene95710.t1 MTR_8g469020 55.435 460 162 9 15 441 7 456 4.16e-157 452
MS.gene95710.t1 MTR_8g062300 52.535 493 169 14 1 440 1 481 8.59e-151 437
MS.gene95710.t1 MTR_8g467790 57.368 380 114 8 15 380 148 493 3.38e-133 393
MS.gene95710.t1 MTR_4g050250 52.459 427 151 13 1 382 1 420 3.38e-127 375
MS.gene95710.t1 MTR_2g083840 42.405 474 218 19 1 436 1 457 3.52e-93 289
MS.gene95710.t1 MTR_8g468810 42.589 479 216 22 1 436 1 463 5.25e-93 288
MS.gene95710.t1 MTR_8g058970 40.246 487 230 16 1 436 1 477 6.95e-87 273
MS.gene95710.t1 MTR_8g062270 41.394 459 210 18 15 435 16 453 2.55e-86 271
MS.gene95710.t1 MTR_8g014260 42.737 475 209 23 1 436 1 451 2.64e-86 271
MS.gene95710.t1 MTR_4g032730 36.402 478 249 12 1 435 1 466 7.59e-78 249
MS.gene95710.t1 MTR_8g468760 39.738 458 197 15 12 435 6 418 1.30e-76 245
MS.gene95710.t1 MTR_5g092960 38.298 470 242 14 1 435 5 461 4.22e-75 242
MS.gene95710.t1 MTR_2g086020 81.250 144 27 0 298 441 177 320 6.93e-73 232
MS.gene95710.t1 MTR_2g086020 47.712 153 59 5 41 183 1 142 6.35e-30 119
MS.gene95710.t1 MTR_8g467800 39.149 470 235 16 7 441 5 458 8.05e-73 236
MS.gene95710.t1 MTR_8g468840 38.667 450 233 12 14 434 13 448 2.25e-72 235
MS.gene95710.t1 MTR_8g468810 41.927 384 172 18 1 346 1 371 8.32e-67 218
MS.gene95710.t1 MTR_8g445780 38.942 416 201 20 1 389 1 390 2.31e-65 215
MS.gene95710.t1 MTR_8g468810 42.810 306 134 13 1 275 1 296 1.48e-56 190
MS.gene95710.t1 MTR_8g468810 42.810 306 134 13 1 275 1 296 2.53e-56 189
MS.gene95710.t1 MTR_8g468810 42.857 308 135 13 1 277 1 298 3.51e-56 189
MS.gene95710.t1 MTR_8g014160 34.521 449 207 22 13 436 39 425 1.39e-54 187
MS.gene95710.t1 MTR_5g092960 37.931 377 193 11 1 346 5 371 1.77e-50 176
MS.gene95710.t1 MTR_4g024710 38.435 294 158 12 158 436 62 347 6.65e-43 154
MS.gene95710.t1 MTR_8g014210 40.586 239 122 9 210 436 1 231 5.93e-37 135
MS.gene95710.t1 MTR_1g041245 30.022 453 221 18 9 436 5 386 7.44e-37 139
MS.gene95710.t1 MTR_8g467800 39.130 299 143 12 7 277 5 292 1.40e-36 137
MS.gene95710.t1 MTR_8g077460 48.120 133 66 3 304 436 246 375 2.78e-32 126
MS.gene95710.t1 MTR_8g077460 36.800 250 127 13 1 231 1 238 1.46e-25 107
MS.gene95710.t1 MTR_7g056433 27.626 438 247 17 12 436 9 389 3.69e-31 123
MS.gene95710.t1 MTR_3g099800 66.667 87 28 1 348 433 19 105 2.66e-30 113
MS.gene95710.t1 MTR_4g024745 36.071 280 148 12 159 419 17 284 3.26e-30 118
MS.gene95710.t1 MTR_5g021550 49.102 167 58 10 5 152 4 162 4.33e-29 112
MS.gene95710.t1 MTR_5g008950 27.765 443 219 20 17 436 1 365 2.14e-28 115
MS.gene95710.t1 MTR_3g108150 28.472 432 242 17 14 435 12 386 1.19e-26 110
MS.gene95710.t1 MTR_7g098510 27.212 452 252 16 1 436 1 391 1.36e-26 110
MS.gene95710.t1 MTR_7g033915 27.578 446 218 20 9 435 5 364 1.95e-25 107
MS.gene95710.t1 MTR_5g080710 28.539 445 269 20 9 428 26 446 1.01e-24 106
MS.gene95710.t1 MTR_6g022500 27.964 447 226 21 15 436 101 476 9.35e-24 103
MS.gene95710.t1 MTR_2g007450 27.815 453 242 18 15 433 16 417 1.31e-23 102
MS.gene95710.t1 MTR_5g084070 27.626 438 283 16 6 428 1 419 2.23e-23 102
MS.gene95710.t1 MTR_4g024720 42.541 181 72 8 1 153 1 177 3.80e-23 97.1
MS.gene95710.t1 MTR_8g014290 40.909 154 75 8 13 152 8 159 8.20e-23 94.7
MS.gene95710.t1 MTR_1g108820 29.274 427 243 19 15 433 8 383 9.95e-23 99.8
MS.gene95710.t1 MTR_1g085120 27.664 441 241 21 14 436 91 471 1.19e-22 100
MS.gene95710.t1 MTR_1g085120 27.664 441 241 21 14 436 166 546 1.27e-22 100
MS.gene95710.t1 MTR_3g109982 28.870 478 237 23 8 415 10 454 7.52e-21 95.9
MS.gene95710.t1 MTR_7g098480 26.386 451 253 12 1 435 1 388 1.00e-20 94.7
MS.gene95710.t1 MTR_7g056287 27.955 440 229 21 14 435 2 371 2.44e-20 92.4
MS.gene95710.t1 MTR_7g056277 27.803 446 230 21 10 435 254 627 5.12e-20 93.2
MS.gene95710.t1 MTR_7g026500 26.856 458 245 23 3 435 2 394 8.23e-20 91.3
MS.gene95710.t1 MTR_7g007080 28.322 459 219 20 13 439 2 382 9.19e-20 91.3
MS.gene95710.t1 MTR_7g115270 32.579 221 109 11 5 203 2 204 1.29e-19 90.9
MS.gene95710.t1 MTR_2g008310 27.727 440 230 20 15 436 2 371 3.99e-19 89.4
MS.gene95710.t1 MTR_7g056447 35.000 200 104 9 9 198 3 186 4.40e-19 87.8
MS.gene95710.t1 MTR_7g098570 26.829 451 246 19 1 431 2 388 5.33e-19 89.7
MS.gene95710.t1 MTR_3g108560 26.712 438 241 18 12 435 17 388 7.62e-18 85.5
MS.gene95710.t1 MTR_2g008320 28.442 443 229 23 15 436 52 427 1.00e-17 85.5
MS.gene95710.t1 MTR_4g056040 28.322 459 241 21 12 404 6 442 1.25e-17 85.5
MS.gene95710.t1 MTR_1g053025 27.640 445 236 22 15 433 2 386 2.70e-17 83.6
MS.gene95710.t1 MTR_4g056030 35.644 202 106 9 12 201 6 195 3.04e-17 84.0
MS.gene95710.t1 MTR_4g056020 27.828 442 237 19 12 405 6 413 4.82e-17 83.6
MS.gene95710.t1 MTR_8g085430 32.367 207 101 9 15 200 11 199 9.11e-17 81.6
MS.gene95710.t1 MTR_7g032380 32.828 198 105 8 15 200 11 192 1.20e-16 81.3
MS.gene95710.t1 MTR_8g014230 46.429 84 43 2 346 429 17 98 1.94e-16 75.1
MS.gene95710.t1 MTR_5g008920 32.850 207 107 9 8 200 2 190 4.32e-16 80.1
MS.gene95710.t1 MTR_2g007500 34.314 204 106 10 9 203 8 192 4.75e-16 79.3
MS.gene95710.t1 MTR_5g073420 31.795 195 113 10 15 199 11 195 7.58e-16 79.3
MS.gene95710.t1 MTR_3g107160 25.682 440 249 17 12 436 7 383 7.90e-16 79.3
MS.gene95710.t1 MTR_7g033945 32.967 182 95 8 9 178 5 171 9.89e-16 75.5
MS.gene95710.t1 MTR_4g098590 26.988 415 214 20 17 403 1 354 1.29e-15 78.6
MS.gene95710.t1 MTR_3g087260 26.458 480 279 18 5 435 2 456 1.50e-15 79.0
MS.gene95710.t1 MTR_4g093690 33.333 276 141 17 12 271 15 263 2.32e-15 76.6
MS.gene95710.t1 MTR_5g073370 26.887 424 236 17 12 423 2 363 4.90e-15 77.0
MS.gene95710.t1 MTR_4g024770 58.065 62 23 2 1 60 8 68 7.81e-15 69.7
MS.gene95710.t1 MTR_3g107120 25.298 419 230 15 10 403 4 364 1.14e-14 75.9
MS.gene95710.t1 MTR_3g082890 29.963 267 133 11 11 236 93 346 1.27e-14 76.3
MS.gene95710.t1 MTR_3g082890 29.749 279 140 12 1 236 1 266 1.60e-14 75.5
MS.gene95710.t1 MTR_6g011460 33.333 201 107 10 15 203 46 231 3.20e-14 74.7
MS.gene95710.t1 MTR_4g080590 27.009 448 281 17 11 431 19 447 3.25e-14 74.7
MS.gene95710.t1 MTR_5g083890 25.571 438 240 18 14 418 5 389 5.81e-14 74.3
MS.gene95710.t1 MTR_1g090900 35.714 168 98 5 12 178 8 166 6.35e-14 70.9
MS.gene95710.t1 MTR_7g034110 33.005 203 109 9 15 203 11 200 6.60e-14 73.2
MS.gene95710.t1 MTR_6g022360 31.959 194 98 10 15 199 43 211 8.41e-14 73.2
MS.gene95710.t1 MTR_5g061680 33.503 197 105 10 15 199 11 193 9.47e-14 72.4
MS.gene95710.t1 MTR_7g033990 30.000 210 112 9 9 201 5 196 9.57e-14 73.2
MS.gene95710.t1 MTR_3g036250 30.198 202 111 10 12 199 2 187 2.04e-13 71.6
MS.gene95710.t1 MTR_1g038710 34.286 210 108 10 13 207 17 211 6.81e-13 70.5
MS.gene95710.t1 MTR_3g095640 32.903 155 89 6 15 160 18 166 9.91e-13 66.6
MS.gene95710.t1 MTR_1089s0010 32.374 139 82 5 305 436 246 379 1.80e-12 68.9
MS.gene95710.t1 MTR_1089s0010 30.460 174 102 7 11 178 4 164 7.03e-12 67.0
MS.gene95710.t1 MTR_3g095600 29.412 204 112 6 15 213 4 180 2.72e-12 67.8
MS.gene95710.t1 MTR_3g105060 29.902 204 124 9 9 205 8 199 3.06e-12 68.2
MS.gene95710.t1 MTR_7g034115 32.039 206 98 9 15 201 11 193 3.15e-12 68.2
MS.gene95710.t1 MTR_8g014180 59.322 59 21 2 1 57 1 58 3.33e-12 61.6
MS.gene95710.t1 MTR_4g080787 26.250 480 288 22 1 435 5 463 4.54e-12 68.2
MS.gene95710.t1 MTR_3g023470 35.172 145 78 7 12 153 12 143 9.25e-12 66.6
MS.gene95710.t1 MTR_3g040700 28.922 204 119 8 8 199 36 225 9.84e-12 67.0
MS.gene95710.t1 MTR_4g080773 26.549 452 261 23 1 403 5 434 1.14e-11 67.0
MS.gene95710.t1 MTR_4g080773 26.549 452 261 23 1 403 5 434 1.29e-11 66.6
MS.gene95710.t1 MTR_1g085120 31.980 197 105 11 14 197 178 358 1.52e-11 66.6
MS.gene95710.t1 MTR_5g082930 40.426 94 43 4 17 104 17 103 1.65e-11 63.9
MS.gene95710.t1 MTR_2g101950 31.720 186 107 8 1 178 63 236 1.74e-11 65.9
MS.gene95710.t1 MTR_2g101950 31.720 186 107 8 1 178 21 194 1.89e-11 65.9
MS.gene95710.t1 MTR_3g107100 27.751 209 125 10 12 207 8 203 1.99e-11 65.9
MS.gene95710.t1 MTR_5g058100 30.542 203 121 8 11 205 5 195 2.11e-11 65.9
MS.gene95710.t1 MTR_1g492880 40.000 95 49 3 11 104 2 89 2.45e-11 60.8
MS.gene95710.t1 MTR_7g114710 27.092 251 149 9 15 246 13 248 2.59e-11 65.5
MS.gene95710.t1 MTR_2g101950 31.720 186 107 8 1 178 62 235 2.62e-11 65.5
MS.gene95710.t1 MTR_2g101950 31.720 186 107 8 1 178 63 236 2.73e-11 65.5
MS.gene95710.t1 MTR_1g492880 40.000 95 49 3 11 104 2 89 2.78e-11 60.5
MS.gene95710.t1 MTR_1g115245 26.991 226 120 9 7 202 17 227 3.20e-11 64.7
MS.gene95710.t1 MTR_5g058000 31.414 191 108 10 15 196 8 184 3.95e-11 64.7
MS.gene95710.t1 MTR_7g032370 32.117 137 85 3 307 436 217 352 4.15e-11 64.7
MS.gene95710.t1 MTR_4g092430 36.420 162 73 8 7 154 29 174 4.39e-11 65.1
MS.gene95710.t1 MTR_5g045510 30.729 192 114 9 15 199 12 191 5.03e-11 64.3
MS.gene95710.t1 MTR_4g092430 36.420 162 73 8 7 154 29 174 5.40e-11 64.7
MS.gene95710.t1 MTR_3g108560 30.256 195 116 9 12 202 17 195 6.39e-11 63.5
MS.gene95710.t1 MTR_7g088260 28.774 212 124 8 14 215 90 284 7.56e-11 64.3
MS.gene95710.t1 MTR_7g034090 29.694 229 115 10 14 202 3 225 8.52e-11 63.9
MS.gene95710.t1 MTR_5g087940 33.333 177 103 7 2 178 13 174 8.66e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95710.t1 AT1G78750 25.000 480 283 20 2 433 5 455 1.91e-24 105
MS.gene95710.t1 AT1G78750 25.000 480 283 20 2 433 5 455 1.91e-24 105
MS.gene95710.t1 AT5G53840 27.632 456 267 20 10 433 13 437 4.86e-24 104
MS.gene95710.t1 AT5G56420 25.951 447 278 16 14 436 5 422 4.90e-24 103
MS.gene95710.t1 AT5G56420 25.951 447 278 16 14 436 5 422 4.90e-24 103
MS.gene95710.t1 AT5G56420 25.951 447 278 16 14 436 5 422 4.90e-24 103
MS.gene95710.t1 AT5G56560 27.314 443 278 19 12 436 2 418 1.18e-22 100
MS.gene95710.t1 AT1G78760 25.325 462 290 19 7 437 8 445 3.50e-22 99.0
MS.gene95710.t1 AT1G16930 25.102 490 272 20 1 436 1 449 6.76e-21 95.1
MS.gene95710.t1 AT1G16930 25.102 490 272 20 1 436 1 449 6.76e-21 95.1
MS.gene95710.t1 AT1G16930 25.102 490 272 20 1 436 1 449 6.76e-21 95.1
MS.gene95710.t1 AT1G51370 26.374 455 262 20 11 431 15 430 5.93e-20 92.0
MS.gene95710.t1 AT3G59200 33.161 193 115 7 15 199 7 193 1.61e-19 90.1
MS.gene95710.t1 AT2G26030 26.039 457 283 17 15 433 4 443 3.74e-19 89.7
MS.gene95710.t1 AT3G50710 26.386 451 278 20 15 436 2 427 3.85e-19 89.7
MS.gene95710.t1 AT3G59200 33.161 193 115 7 15 199 7 193 5.77e-19 89.7
MS.gene95710.t1 AT3G58920 26.955 486 272 20 15 436 2 468 1.09e-18 88.6
MS.gene95710.t1 AT2G26030 26.039 457 278 17 15 433 4 438 1.70e-18 87.8
MS.gene95710.t1 AT2G26030 26.039 457 278 17 15 433 4 438 1.70e-18 87.8
MS.gene95710.t1 AT4G10400 26.651 439 272 17 15 435 2 408 1.88e-18 87.4
MS.gene95710.t1 AT4G10400 26.651 439 272 17 15 435 2 408 1.88e-18 87.4
MS.gene95710.t1 AT4G10400 26.651 439 272 17 15 435 2 408 1.88e-18 87.4
MS.gene95710.t1 AT5G38392 34.000 200 110 8 15 199 2 194 2.88e-18 83.6
MS.gene95710.t1 AT1G32375 26.726 449 274 18 15 436 2 422 4.48e-18 86.3
MS.gene95710.t1 AT1G32375 26.726 449 274 18 15 436 2 422 4.48e-18 86.3
MS.gene95710.t1 AT1G69630 25.963 493 253 23 3 433 6 448 4.92e-18 86.7
MS.gene95710.t1 AT5G53635 27.074 458 261 16 17 435 2 425 8.33e-18 85.5
MS.gene95710.t1 AT4G00160 28.538 424 237 19 5 395 6 396 1.44e-17 85.1
MS.gene95710.t1 AT5G44950 25.934 455 276 18 14 431 3 433 1.61e-17 84.7
MS.gene95710.t1 AT5G56820 27.119 472 256 22 1 433 1 423 1.74e-17 84.7
MS.gene95710.t1 AT4G13985 25.380 461 287 17 11 433 15 456 4.96e-17 83.6
MS.gene95710.t1 AT3G59240 28.443 334 191 16 14 315 7 324 1.26e-16 82.4
MS.gene95710.t1 AT5G44980 27.802 464 262 18 13 435 2 433 1.36e-16 82.0
MS.gene95710.t1 AT5G44980 27.802 464 262 18 13 435 2 433 1.36e-16 82.0
MS.gene95710.t1 AT5G22700 25.653 421 263 18 4 413 32 413 3.56e-16 80.9
MS.gene95710.t1 AT5G22610 24.625 467 286 19 1 434 1 434 5.92e-16 80.1
MS.gene95710.t1 AT4G26340 26.126 444 280 17 15 436 2 419 5.95e-16 80.1
MS.gene95710.t1 AT3G59190 31.220 205 126 8 5 199 2 201 9.18e-16 79.0
MS.gene95710.t1 AT3G59190 31.220 205 126 8 5 199 2 201 1.06e-15 79.7
MS.gene95710.t1 AT5G60610 26.521 411 248 18 15 400 2 383 1.28e-15 78.6
MS.gene95710.t1 AT5G60610 26.521 411 248 18 15 400 2 383 1.28e-15 78.6
MS.gene95710.t1 AT1G66290 26.078 464 264 24 11 433 25 450 2.04e-15 78.6
MS.gene95710.t1 AT1G06630 27.513 378 210 18 7 346 4 355 2.67e-15 77.4
MS.gene95710.t1 AT1G06630 27.513 378 210 18 7 346 4 355 2.67e-15 77.4
MS.gene95710.t1 AT4G14096 29.368 269 154 13 15 261 8 262 5.01e-15 77.4
MS.gene95710.t1 AT4G14096 29.368 269 154 13 15 261 8 262 5.01e-15 77.4
MS.gene95710.t1 AT5G22610 25.105 478 300 20 1 434 1 464 5.27e-15 77.4
MS.gene95710.t1 AT1G06630 27.297 381 213 18 7 349 4 358 6.48e-15 76.6
MS.gene95710.t1 AT1G06630 27.297 381 213 18 7 349 4 358 6.48e-15 76.6
MS.gene95710.t1 AT1G06630 27.297 381 213 18 7 349 4 358 6.48e-15 76.6
MS.gene95710.t1 AT1G06630 27.297 381 213 18 7 349 4 358 6.48e-15 76.6
MS.gene95710.t1 AT1G06630 27.297 381 213 18 7 349 13 367 6.78e-15 76.6
MS.gene95710.t1 AT5G56690 30.890 191 121 7 17 201 4 189 1.55e-14 75.5
MS.gene95710.t1 AT1G06630 27.467 375 208 18 7 343 4 352 2.28e-14 75.5
MS.gene95710.t1 AT5G38570 24.771 436 251 15 15 435 2 375 3.45e-14 74.3
MS.gene95710.t1 AT5G22660 24.948 485 270 21 1 433 1 443 3.96e-14 74.3
MS.gene95710.t1 AT5G53640 32.850 207 117 10 13 213 20 210 4.10e-14 72.0
MS.gene95710.t1 AT1G66310 26.160 474 269 26 2 433 5 439 5.37e-14 73.9
MS.gene95710.t1 AT5G44940 25.000 444 246 16 12 436 2 377 5.42e-14 73.6
MS.gene95710.t1 AT5G22700 29.185 233 144 8 4 230 32 249 6.85e-14 73.9
MS.gene95710.t1 AT5G22700 30.570 193 114 7 15 201 6 184 8.89e-14 73.6
MS.gene95710.t1 AT5G22700 30.570 193 114 7 15 201 6 184 8.89e-14 73.6
MS.gene95710.t1 AT5G22700 30.570 193 114 7 15 201 6 184 8.89e-14 73.6
MS.gene95710.t1 AT5G22700 30.570 193 114 7 15 201 6 184 8.89e-14 73.6
MS.gene95710.t1 AT3G60040 25.952 420 227 21 14 385 12 395 9.72e-14 73.9
MS.gene95710.t1 AT3G60040 25.952 420 227 21 14 385 229 612 1.54e-13 73.2
MS.gene95710.t1 AT3G60040 25.952 420 227 21 14 385 232 615 1.79e-13 73.2
MS.gene95710.t1 AT3G60040 25.952 420 227 21 14 385 231 614 1.85e-13 73.2
MS.gene95710.t1 AT3G60040 25.952 420 227 21 14 385 231 614 1.87e-13 72.8
MS.gene95710.t1 AT1G06630 27.358 318 173 15 7 290 4 297 4.86e-13 70.1
MS.gene95710.t1 AT3G58980 26.809 470 263 24 15 434 2 440 8.85e-13 70.9
MS.gene95710.t1 AT3G49150 30.180 222 133 10 13 225 14 222 9.35e-13 70.5
MS.gene95710.t1 AT4G22280 27.438 441 270 19 15 435 2 412 1.60e-12 69.3
MS.gene95710.t1 AT5G18780 25.322 466 277 18 8 433 4 438 1.62e-12 69.3
MS.gene95710.t1 AT5G18780 25.322 466 277 18 8 433 4 438 1.62e-12 69.3
MS.gene95710.t1 AT2G42720 32.323 198 112 8 15 199 2 190 2.17e-12 68.9
MS.gene95710.t1 AT5G35995 26.793 474 272 23 14 435 4 454 3.45e-12 68.6
MS.gene95710.t1 AT5G35995 26.793 474 272 23 14 435 4 454 3.45e-12 68.6
MS.gene95710.t1 AT3G03030 30.808 198 117 8 15 199 2 192 3.52e-12 67.8
MS.gene95710.t1 AT4G00315 32.308 195 112 9 15 199 2 186 4.14e-12 68.2
MS.gene95710.t1 AT5G41840 28.704 216 133 11 15 213 14 225 5.69e-12 68.2
MS.gene95710.t1 AT3G03030 30.808 198 117 8 15 199 2 192 5.79e-12 67.8
MS.gene95710.t1 AT2G29930 24.385 488 281 22 5 435 2 458 7.48e-12 67.4
MS.gene95710.t1 AT2G29930 24.385 488 281 22 5 435 2 458 7.48e-12 67.4
MS.gene95710.t1 AT5G38590 25.173 433 261 21 15 421 2 397 8.82e-12 67.0
MS.gene95710.t1 AT1G58310 25.786 318 171 13 11 284 4 300 1.47e-11 66.6
MS.gene95710.t1 AT5G18780 30.342 234 137 10 8 232 4 220 1.59e-11 66.2
MS.gene95710.t1 AT5G18780 30.342 234 137 10 8 232 4 220 1.59e-11 66.2
MS.gene95710.t1 AT2G04230 25.659 417 255 17 14 399 12 404 2.02e-11 66.2
MS.gene95710.t1 AT1G66300 25.000 464 278 22 8 433 22 453 2.67e-11 65.9
MS.gene95710.t1 AT1G80470 24.947 473 287 23 1 439 1 439 2.67e-11 65.9
MS.gene95710.t1 AT4G22280 28.940 349 209 15 15 343 2 331 3.02e-11 65.1
MS.gene95710.t1 AT3G26922 29.000 200 124 8 6 199 5 192 4.93e-11 63.9
MS.gene95710.t1 AT3G26922 29.000 200 124 8 6 199 5 192 4.93e-11 63.9
MS.gene95710.t1 AT1G66320 31.250 208 114 10 3 199 18 207 5.21e-11 64.7
MS.gene95710.t1 AT5G56810 26.444 450 267 18 15 433 15 431 5.53e-11 64.7
MS.gene95710.t1 AT1G05080 32.195 205 117 9 1 197 1 191 6.73e-11 64.3
MS.gene95710.t1 AT5G22720 23.154 501 282 21 1 435 1 464 7.22e-11 64.3
MS.gene95710.t1 AT5G41630 30.857 175 108 6 14 178 11 182 8.59e-11 64.3

Find 115 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAGTTTGCACCTTAATT+TGG 0.204820 8.4:+32483775 None:intergenic
TGAAACAAATTGCGAAATTC+TGG 0.250149 8.4:+32484304 None:intergenic
CTGTGGTTCCGTGCTGCCAC+TGG 0.273427 8.4:-32485425 MS.gene95710:CDS
CGTTGGCAACTTTCATAGTA+TGG 0.280390 8.4:-32484577 MS.gene95710:CDS
TTGAGAGGAAGGAGAGTATA+TGG 0.321533 8.4:+32485681 None:intergenic
GAGAATGTTGAACTTTGATA+TGG 0.322360 8.4:+32484841 None:intergenic
CCAGCCCCGTCTCCAAATTA+AGG 0.332265 8.4:-32483787 None:intergenic
CTGCTTCAACTCGAATCTTC+TGG 0.334716 8.4:-32484263 MS.gene95710:CDS
CCTTAATTTGGAGACGGGGC+TGG 0.343517 8.4:+32483787 None:intergenic
TCTCTCTGCCTGCCCGGTGC+TGG 0.348391 8.4:-32484751 MS.gene95710:CDS
AGCTCAAACTTGTCTGGATC+CGG 0.375571 8.4:+32485446 None:intergenic
GGAAGAGGTTGTTGAGAATA+GGG 0.378113 8.4:+32484505 None:intergenic
AACCATCACCGTTGAGAACT+TGG 0.381357 8.4:-32484053 MS.gene95710:CDS
CTCACAAGTGGCGCCACCTA+TGG 0.388026 8.4:-32485625 MS.gene95710:CDS
ACTGGTGGATTTCAAGCTCT+TGG 0.397305 8.4:+32484656 None:intergenic
AATTCTGGATAATTTAGAAC+AGG 0.398748 8.4:+32484319 None:intergenic
CTTAATTTGGAGACGGGGCT+GGG 0.399371 8.4:+32483788 None:intergenic
CTGCCCGGTGCTGGAAACTA+TGG 0.407907 8.4:-32484742 MS.gene95710:CDS
ACGGAACTTCCGAATGTTGC+GGG 0.412266 8.4:+32485484 None:intergenic
ATTCACATTGAAGGATATCA+AGG 0.416044 8.4:-32483979 MS.gene95710:CDS
TGGAAGAGGTTGTTGAGAAT+AGG 0.418982 8.4:+32484504 None:intergenic
CTGACTTATATTCACATTGA+AGG 0.419150 8.4:-32483988 MS.gene95710:CDS
GGACCGATTGAGTAGTTTAC+CGG 0.425932 8.4:-32485717 MS.gene95710:CDS
CAGTTGATGAAGAGGGAAGG+AGG 0.429220 8.4:+32485344 None:intergenic
TCCGTAGATCCCGCAACATT+CGG 0.431134 8.4:-32485493 MS.gene95710:CDS
CGTTCAAAGATATGTCTTCA+AGG 0.436000 8.4:+32484706 None:intergenic
GGAGAGTATATGGCATAGAA+TGG 0.444991 8.4:+32485691 None:intergenic
AACCACAGCTCAAACTTGTC+TGG 0.446760 8.4:+32485440 None:intergenic
TCCGAATGTTGCGGGATCTA+CGG 0.447191 8.4:+32485492 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.459725 8.4:+32484264 None:intergenic
TGTGGTTCCGTGCTGCCACT+GGG 0.472104 8.4:-32485424 MS.gene95710:CDS
AGTTGATGAAGAGGGAAGGA+GGG 0.475091 8.4:+32485345 None:intergenic
TTGCACCTTAATTTGGAGAC+GGG 0.482235 8.4:+32483782 None:intergenic
TGGTGTAGAGACTGTGTATC+CGG 0.484617 8.4:-32484784 MS.gene95710:CDS
CGAAGTCGAAGTCAAAGATC+TGG 0.487653 8.4:+32485594 None:intergenic
TCGCATGACACAGAACCCTT+TGG 0.490917 8.4:+32483823 None:intergenic
CTTCAATGTGAATATAAGTC+AGG 0.492415 8.4:+32483989 None:intergenic
ATGTCAAATGACGCGAAAGT+AGG 0.492783 8.4:+32484457 None:intergenic
GAGCTGAAGGAAGGTGGAAT+GGG 0.492788 8.4:+32484678 None:intergenic
TTTCAAGCTCTTGGAGCTGA+AGG 0.498482 8.4:+32484665 None:intergenic
TCACAAGTGGCGCCACCTAT+GGG 0.499278 8.4:-32485624 MS.gene95710:CDS
CCCCATGCCATGGGAATCGT+TGG 0.505498 8.4:-32484594 MS.gene95710:CDS
CCACCAGTGACAATTTCACT+TGG 0.513037 8.4:-32484641 MS.gene95710:CDS
GGAGCTGAAGGAAGGTGGAA+TGG 0.513985 8.4:+32484677 None:intergenic
CGGTGAGAGAGAGTTCTTGA+AGG 0.520852 8.4:+32485396 None:intergenic
ACCGTTGAGAACTTGGGAGC+CGG 0.521091 8.4:-32484046 MS.gene95710:CDS
TGCCAACGATTCCCATGGCA+TGG 0.525866 8.4:+32484592 None:intergenic
CATAGTTTCCAGCACCGGGC+AGG 0.527459 8.4:+32484743 None:intergenic
TCCCAAGTTCTCAACGGTGA+TGG 0.531325 8.4:+32484051 None:intergenic
TATCCATAGTTTCCAGCACC+GGG 0.531894 8.4:+32484739 None:intergenic
AGTTTGAGTCTCTTGAGTGA+TGG 0.537670 8.4:+32484807 None:intergenic
GCCAACGATTCCCATGGCAT+GGG 0.537712 8.4:+32484593 None:intergenic
GAGAGAGAGTTCTTGAAGGT+GGG 0.539975 8.4:+32485400 None:intergenic
TGTTAATACTGCAGTCTGCA+TGG 0.541343 8.4:-32484873 MS.gene95710:intron
GGAGGTTCGAGTTGAGAGGA+AGG 0.542164 8.4:+32485670 None:intergenic
GCTCAAACTTGTCTGGATCC+GGG 0.545166 8.4:+32485447 None:intergenic
TTCGCGTCATTTGACATCAA+AGG 0.548380 8.4:-32484451 MS.gene95710:intron
CCGTCTCAACTGTGATTACC+CGG 0.548978 8.4:-32485465 MS.gene95710:CDS
TTGCAGTTGATGAAGAGGGA+AGG 0.550454 8.4:+32485341 None:intergenic
GAAATCATCGGCGTTTAGAA+CGG 0.551223 8.4:+32485376 None:intergenic
AGATTGACTGACATACCAAA+GGG 0.555026 8.4:-32483838 MS.gene95710:CDS
GCAACAACCTCGTTTCCCTC+CGG 0.555731 8.4:-32485322 MS.gene95710:intron
AAGCTCTTGGAGCTGAAGGA+AGG 0.556513 8.4:+32484669 None:intergenic
TGATATATATCCCCATGCCA+TGG 0.557958 8.4:-32484604 MS.gene95710:CDS
AGTCCGGTAAACTACTCAAT+CGG 0.563071 8.4:+32485714 None:intergenic
TCAGAAACTGTTGTTGACTC+CGG 0.563716 8.4:+32484027 None:intergenic
ATATCCATAGTTTCCAGCAC+CGG 0.564580 8.4:+32484738 None:intergenic
AGAGAGAGTTCTTGAAGGTG+GGG 0.565805 8.4:+32485401 None:intergenic
TTCTTGAAGGTGGGGCCCAG+TGG 0.568174 8.4:+32485409 None:intergenic
TGAGAGAGAGTTCTTGAAGG+TGG 0.568933 8.4:+32485399 None:intergenic
ACCATCACCGTTGAGAACTT+GGG 0.571797 8.4:-32484052 MS.gene95710:CDS
TCACTCAAGAGACTCAAACT+TGG 0.571944 8.4:-32484804 MS.gene95710:CDS
CTCTTGGAGCTGAAGGAAGG+TGG 0.572877 8.4:+32484672 None:intergenic
GATATATATCCCCATGCCAT+GGG 0.573052 8.4:-32484603 MS.gene95710:CDS
TTTGCACCTTAATTTGGAGA+CGG 0.573742 8.4:+32483781 None:intergenic
CCAAGTGAAATTGTCACTGG+TGG 0.576402 8.4:+32484641 None:intergenic
GGTGGGGCCCAGTGGCAGCA+CGG 0.576656 8.4:+32485417 None:intergenic
GGTTGTTGCAGTTGATGAAG+AGG 0.580839 8.4:+32485336 None:intergenic
AGATCTGGAGTTGCTCCCAT+AGG 0.583695 8.4:+32485609 None:intergenic
ACGGCGGAAAGCAGAAGAAG+AGG 0.584769 8.4:-32485738 MS.gene95710:CDS
AAACTTTCGTCGTAAAAGTG+AGG 0.592993 8.4:+32485554 None:intergenic
GACGGAACTTCCGAATGTTG+CGG 0.593125 8.4:+32485483 None:intergenic
TTGAGTGATGGAAAATGAAG+TGG 0.593301 8.4:+32484819 None:intergenic
TGGCGGAGTCAAGTTTGAAA+CGG 0.594179 8.4:-32485757 MS.gene95710:CDS
CGACGGAGGTTCGAGTTGAG+AGG 0.594916 8.4:+32485666 None:intergenic
CAATGTGAATATAAGTCAGG+TGG 0.596431 8.4:+32483992 None:intergenic
ATATGGCATAGAATGGAGTC+CGG 0.596950 8.4:+32485698 None:intergenic
GCAGAGAGAAAAGCAACTAC+CGG 0.598878 8.4:+32484765 None:intergenic
GTTGTTGCAGTTGATGAAGA+GGG 0.600653 8.4:+32485337 None:intergenic
GACAAATTCACTTTCACGTG+AGG 0.601494 8.4:+32484530 None:intergenic
TGACTCTTGTCTCTCACAAG+TGG 0.601566 8.4:-32485637 MS.gene95710:CDS
GAATGTTGCGGGATCTACGG+AGG 0.602468 8.4:+32485495 None:intergenic
TCTGGAGTTGCTCCCATAGG+TGG 0.602614 8.4:+32485612 None:intergenic
GACAAGAGTCATCGTCGCGA+CGG 0.603469 8.4:+32485649 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.608111 8.4:+32484265 None:intergenic
TCCGGCTCCCAAGTTCTCAA+CGG 0.611432 8.4:+32484045 None:intergenic
AAGATTGACTGACATACCAA+AGG 0.615806 8.4:-32483839 MS.gene95710:CDS
CCGGGTAATCACAGTTGAGA+CGG 0.616919 8.4:+32485465 None:intergenic
ATCCAGACAAGTTTGAGCTG+TGG 0.618644 8.4:-32485442 MS.gene95710:CDS
TTCTGGATAATTTAGAACAG+GGG 0.619433 8.4:+32484321 None:intergenic
AGGGAGTTTAACGAAATCAT+CGG 0.620326 8.4:+32485364 None:intergenic
TTTAGAACAGGGGCATGAAG+TGG 0.625835 8.4:+32484331 None:intergenic
AGTCCAAGTGAAATTGTCAC+TGG 0.626020 8.4:+32484638 None:intergenic
TCTCATAATTAAGAGCAGCA+AGG 0.629918 8.4:-32484206 MS.gene95710:intron
TGGCAACTTTCATAGTATGG+TGG 0.634902 8.4:-32484574 MS.gene95710:CDS
ATTCTGGATAATTTAGAACA+GGG 0.634970 8.4:+32484320 None:intergenic
GTTAGTACCGGAGGGAAACG+AGG 0.636742 8.4:+32485315 None:intergenic
AATGTGAATATAAGTCAGGT+GGG 0.643217 8.4:+32483993 None:intergenic
AAAGTTGCCAACGATTCCCA+TGG 0.645198 8.4:+32484587 None:intergenic
TGCACCTTAATTTGGAGACG+GGG 0.646458 8.4:+32483783 None:intergenic
CCAACGATTCCCATGGCATG+GGG 0.654317 8.4:+32484594 None:intergenic
AAGAGTCATCGTCGCGACGG+AGG 0.657628 8.4:+32485652 None:intergenic
AATGTTGCGGGATCTACGGA+GGG 0.658201 8.4:+32485496 None:intergenic
CGGAGTCAAGTTTGAAACGG+CGG 0.679832 8.4:-32485754 MS.gene95710:CDS
GGTGAGCACAGCATTGACGA+AGG 0.700671 8.4:+32485517 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTTATATATGTAGT+TGG - chr8.4:32485150-32485169 MS.gene95710:intron 10.0%
!!! AGTTTAATTTAATCAATATA+TGG - chr8.4:32485379-32485398 MS.gene95710:CDS 10.0%
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.4:32485657-32485676 MS.gene95710:CDS 15.0%
!! AGGACTAAGAATAAAAAAAA+TGG + chr8.4:32484273-32484292 None:intergenic 20.0%
!! ATAGTAACTGTATAAACTTA+GGG - chr8.4:32484333-32484352 MS.gene95710:CDS 20.0%
!! GAAAACAAAATCTAAAAATG+AGG + chr8.4:32484416-32484435 None:intergenic 20.0%
!!! AAGGTGAAGTTTTATTTTTA+TGG - chr8.4:32485115-32485134 MS.gene95710:intron 20.0%
!!! ACAAATATATTTTTGAGTTG+TGG - chr8.4:32485443-32485462 MS.gene95710:CDS 20.0%
!!! TATTTGTTTTGTTTCAATGA+TGG + chr8.4:32484628-32484647 None:intergenic 20.0%
!!! TCAAAATACTCTTGTTTTAA+TGG - chr8.4:32484518-32484537 MS.gene95710:CDS 20.0%
!!! TTTCATTGTTTTTGTTATCT+TGG + chr8.4:32485066-32485085 None:intergenic 20.0%
! AAAATGGAGAGATTGAAATT+AGG + chr8.4:32484257-32484276 None:intergenic 25.0%
! ATAGGTTTGTGAATGAAAAT+AGG + chr8.4:32484439-32484458 None:intergenic 25.0%
! CATAGTAACTGTATAAACTT+AGG - chr8.4:32484332-32484351 MS.gene95710:CDS 25.0%
! CATTCACAAACCTATAAATA+AGG - chr8.4:32484444-32484463 MS.gene95710:intron 25.0%
! TAGGTTTGTGAATGAAAATA+GGG + chr8.4:32484438-32484457 None:intergenic 25.0%
! TAGTAACTGTATAAACTTAG+GGG - chr8.4:32484334-32484353 MS.gene95710:CDS 25.0%
!! AATTCTGGATAATTTAGAAC+AGG + chr8.4:32485231-32485250 None:intergenic 25.0%
!! ACAAATTTGAAACAAATGTG+AGG + chr8.4:32484479-32484498 None:intergenic 25.0%
!! ATTCTGGATAATTTAGAACA+GGG + chr8.4:32485230-32485249 None:intergenic 25.0%
!! TTAATGGTGGAAATGAAATT+TGG - chr8.4:32484534-32484553 MS.gene95710:CDS 25.0%
!!! AAATACTCTTGTTTTAATGG+TGG - chr8.4:32484521-32484540 MS.gene95710:CDS 25.0%
!!! CATTTGCTGAATATATTTTG+CGG - chr8.4:32485608-32485627 MS.gene95710:CDS 25.0%
!!! GAGTATTTTGACAATTTCAT+AGG + chr8.4:32484509-32484528 None:intergenic 25.0%
AATGAGGAAACTACCAAATT+AGG + chr8.4:32484400-32484419 None:intergenic 30.0%
AATGTGAATATAAGTCAGGT+GGG + chr8.4:32485557-32485576 None:intergenic 30.0%
ATGAGGAAACTACCAAATTA+GGG + chr8.4:32484399-32484418 None:intergenic 30.0%
ATTCACATTGAAGGATATCA+AGG - chr8.4:32485568-32485587 MS.gene95710:CDS 30.0%
CTGACTTATATTCACATTGA+AGG - chr8.4:32485559-32485578 MS.gene95710:CDS 30.0%
CTTCAATGTGAATATAAGTC+AGG + chr8.4:32485561-32485580 None:intergenic 30.0%
GAGAACAAGAGATGAAATTA+TGG + chr8.4:32484596-32484615 None:intergenic 30.0%
GAGAATGTTGAACTTTGATA+TGG + chr8.4:32484709-32484728 None:intergenic 30.0%
GATTGAAATTAGGTTAGTAC+CGG + chr8.4:32484247-32484266 None:intergenic 30.0%
TGAAACAAATTGCGAAATTC+TGG + chr8.4:32485246-32485265 None:intergenic 30.0%
TGTTAGACAAAACCCTAATT+TGG - chr8.4:32484384-32484403 MS.gene95710:intron 30.0%
! GCTAACTCTACCTTATTTAT+AGG + chr8.4:32484457-32484476 None:intergenic 30.0%
! TTCTGGATAATTTAGAACAG+GGG + chr8.4:32485229-32485248 None:intergenic 30.0%
!! TGTTTTTGTTATCTTGGAAG+AGG + chr8.4:32485060-32485079 None:intergenic 30.0%
!!! TATATTTTTGAGTTGTGGCA+CGG - chr8.4:32485448-32485467 MS.gene95710:CDS 30.0%
AAACTTTCGTCGTAAAAGTG+AGG + chr8.4:32483996-32484015 None:intergenic 35.0%
AAGATTGACTGACATACCAA+AGG - chr8.4:32485708-32485727 MS.gene95710:CDS 35.0%
AGATTGACTGACATACCAAA+GGG - chr8.4:32485709-32485728 MS.gene95710:CDS 35.0%
AGGGAGTTTAACGAAATCAT+CGG + chr8.4:32484186-32484205 None:intergenic 35.0%
ATGTACACGATAACAAGTGA+TGG + chr8.4:32485189-32485208 None:intergenic 35.0%
CAATGTGAATATAAGTCAGG+TGG + chr8.4:32485558-32485577 None:intergenic 35.0%
CGTTCAAAGATATGTCTTCA+AGG + chr8.4:32484844-32484863 None:intergenic 35.0%
CTGCAGTATTAACAAAAGAC+AGG + chr8.4:32484668-32484687 None:intergenic 35.0%
TCTCATAATTAAGAGCAGCA+AGG - chr8.4:32485341-32485360 MS.gene95710:CDS 35.0%
! GCTGAATATATTTTGCGGAA+CGG - chr8.4:32485613-32485632 MS.gene95710:CDS 35.0%
! TTGAGTGATGGAAAATGAAG+TGG + chr8.4:32484731-32484750 None:intergenic 35.0%
ACATGCAGAAGCAAGCAAAA+TGG + chr8.4:32484367-32484386 None:intergenic 40.0%
AGATAGTGTATGCTAGGACT+AGG - chr8.4:32484295-32484314 MS.gene95710:CDS 40.0%
AGTCCAAGTGAAATTGTCAC+TGG + chr8.4:32484912-32484931 None:intergenic 40.0%
AGTCCGGTAAACTACTCAAT+CGG + chr8.4:32483836-32483855 None:intergenic 40.0%
AGTTTGAGTCTCTTGAGTGA+TGG + chr8.4:32484743-32484762 None:intergenic 40.0%
ATATCCATAGTTTCCAGCAC+CGG + chr8.4:32484812-32484831 None:intergenic 40.0%
ATATGGCATAGAATGGAGTC+CGG + chr8.4:32483852-32483871 None:intergenic 40.0%
ATGTCAAATGACGCGAAAGT+AGG + chr8.4:32485093-32485112 None:intergenic 40.0%
CGTTGGCAACTTTCATAGTA+TGG - chr8.4:32484970-32484989 MS.gene95710:intron 40.0%
GAAATCATCGGCGTTTAGAA+CGG + chr8.4:32484174-32484193 None:intergenic 40.0%
GACAAATTCACTTTCACGTG+AGG + chr8.4:32485020-32485039 None:intergenic 40.0%
GATATATATCCCCATGCCAT+GGG - chr8.4:32484944-32484963 MS.gene95710:intron 40.0%
GGAAGAGGTTGTTGAGAATA+GGG + chr8.4:32485045-32485064 None:intergenic 40.0%
TCACTCAAGAGACTCAAACT+TGG - chr8.4:32484743-32484762 MS.gene95710:CDS 40.0%
TCCTAGCATACACTATCTGA+AGG + chr8.4:32484293-32484312 None:intergenic 40.0%
TCCTTCAGATAGTGTATGCT+AGG - chr8.4:32484289-32484308 MS.gene95710:CDS 40.0%
TGATATATATCCCCATGCCA+TGG - chr8.4:32484943-32484962 MS.gene95710:intron 40.0%
TGGAAGAGGTTGTTGAGAAT+AGG + chr8.4:32485046-32485065 None:intergenic 40.0%
TGGCAACTTTCATAGTATGG+TGG - chr8.4:32484973-32484992 MS.gene95710:intron 40.0%
TGTTAATACTGCAGTCTGCA+TGG - chr8.4:32484674-32484693 MS.gene95710:CDS 40.0%
TTCGCGTCATTTGACATCAA+AGG - chr8.4:32485096-32485115 MS.gene95710:intron 40.0%
! GAAATTAGGTTAGTACCGGA+GGG + chr8.4:32484243-32484262 None:intergenic 40.0%
! GGAGAGTATATGGCATAGAA+TGG + chr8.4:32483859-32483878 None:intergenic 40.0%
! TGAAATTAGGTTAGTACCGG+AGG + chr8.4:32484244-32484263 None:intergenic 40.0%
! TTGAGAGGAAGGAGAGTATA+TGG + chr8.4:32483869-32483888 None:intergenic 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr8.4:32485285-32485304 None:intergenic 40.0%
!! GTTGTTGCAGTTGATGAAGA+GGG + chr8.4:32484213-32484232 None:intergenic 40.0%
!! TCAGAAACTGTTGTTGACTC+CGG + chr8.4:32485523-32485542 None:intergenic 40.0%
AAAGTTGCCAACGATTCCCA+TGG + chr8.4:32484963-32484982 None:intergenic 45.0%
AACCACAGCTCAAACTTGTC+TGG + chr8.4:32484110-32484129 None:intergenic 45.0%
AACCATCACCGTTGAGAACT+TGG - chr8.4:32485494-32485513 MS.gene95710:CDS 45.0%
ACCATCACCGTTGAGAACTT+GGG - chr8.4:32485495-32485514 MS.gene95710:CDS 45.0%
AGAGAGAGTTCTTGAAGGTG+GGG + chr8.4:32484149-32484168 None:intergenic 45.0%
AGCTCAAACTTGTCTGGATC+CGG + chr8.4:32484104-32484123 None:intergenic 45.0%
ATCCAGACAAGTTTGAGCTG+TGG - chr8.4:32484105-32484124 MS.gene95710:intron 45.0%
CCAAGTGAAATTGTCACTGG+TGG + chr8.4:32484909-32484928 None:intergenic 45.0%
CCACCAGTGACAATTTCACT+TGG - chr8.4:32484906-32484925 MS.gene95710:intron 45.0%
CGAAGTCGAAGTCAAAGATC+TGG + chr8.4:32483956-32483975 None:intergenic 45.0%
CTGCTTCAACTCGAATCTTC+TGG - chr8.4:32485284-32485303 MS.gene95710:intron 45.0%
GAGAGAGAGTTCTTGAAGGT+GGG + chr8.4:32484150-32484169 None:intergenic 45.0%
GCAGAGAGAAAAGCAACTAC+CGG + chr8.4:32484785-32484804 None:intergenic 45.0%
GGACCGATTGAGTAGTTTAC+CGG - chr8.4:32483830-32483849 MS.gene95710:CDS 45.0%
GTTCCTCCTACAAGCAACAA+TGG + chr8.4:32485477-32485496 None:intergenic 45.0%
TATCCATAGTTTCCAGCACC+GGG + chr8.4:32484811-32484830 None:intergenic 45.0%
TGACTCTTGTCTCTCACAAG+TGG - chr8.4:32483910-32483929 MS.gene95710:CDS 45.0%
TGAGAGAGAGTTCTTGAAGG+TGG + chr8.4:32484151-32484170 None:intergenic 45.0%
TGGCGGAGTCAAGTTTGAAA+CGG - chr8.4:32483790-32483809 MS.gene95710:CDS 45.0%
TGGTGTAGAGACTGTGTATC+CGG - chr8.4:32484763-32484782 MS.gene95710:CDS 45.0%
TGTATGCTAGGACTAGGACT+AGG - chr8.4:32484301-32484320 MS.gene95710:CDS 45.0%
TTTCAAGCTCTTGGAGCTGA+AGG + chr8.4:32484885-32484904 None:intergenic 45.0%
! TGTCCATTGTTGCTTGTAGG+AGG - chr8.4:32485471-32485490 MS.gene95710:CDS 45.0%
! TTTAGAACAGGGGCATGAAG+TGG + chr8.4:32485219-32485238 None:intergenic 45.0%
!! ACTGGTGGATTTCAAGCTCT+TGG + chr8.4:32484894-32484913 None:intergenic 45.0%
!! AGTTGATGAAGAGGGAAGGA+GGG + chr8.4:32484205-32484224 None:intergenic 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr8.4:32485286-32485305 None:intergenic 45.0%
!! GGTTGTTGCAGTTGATGAAG+AGG + chr8.4:32484214-32484233 None:intergenic 45.0%
!! TTGCAGTTGATGAAGAGGGA+AGG + chr8.4:32484209-32484228 None:intergenic 45.0%
AAGCTCTTGGAGCTGAAGGA+AGG + chr8.4:32484881-32484900 None:intergenic 50.0%
AATGTTGCGGGATCTACGGA+GGG + chr8.4:32484054-32484073 None:intergenic 50.0%
ACGGAACTTCCGAATGTTGC+GGG + chr8.4:32484066-32484085 None:intergenic 50.0%
CCGGGTAATCACAGTTGAGA+CGG + chr8.4:32484085-32484104 None:intergenic 50.0%
CCGTCTCAACTGTGATTACC+CGG - chr8.4:32484082-32484101 MS.gene95710:intron 50.0%
CGGTGAGAGAGAGTTCTTGA+AGG + chr8.4:32484154-32484173 None:intergenic 50.0%
GACGGAACTTCCGAATGTTG+CGG + chr8.4:32484067-32484086 None:intergenic 50.0%
GAGCTGAAGGAAGGTGGAAT+GGG + chr8.4:32484872-32484891 None:intergenic 50.0%
GCTCAAACTTGTCTGGATCC+GGG + chr8.4:32484103-32484122 None:intergenic 50.0%
TCCCAAGTTCTCAACGGTGA+TGG + chr8.4:32485499-32485518 None:intergenic 50.0%
TCCGAATGTTGCGGGATCTA+CGG + chr8.4:32484058-32484077 None:intergenic 50.0%
TCCGTAGATCCCGCAACATT+CGG - chr8.4:32484054-32484073 MS.gene95710:CDS 50.0%
TCGCATGACACAGAACCCTT+TGG + chr8.4:32485727-32485746 None:intergenic 50.0%
! AGATCTGGAGTTGCTCCCAT+AGG + chr8.4:32483941-32483960 None:intergenic 50.0%
! CGGAGTCAAGTTTGAAACGG+CGG - chr8.4:32483793-32483812 MS.gene95710:CDS 50.0%
! CGGTGTCCATTGTTGCTTGT+AGG - chr8.4:32485468-32485487 MS.gene95710:CDS 50.0%
!! CAGTTGATGAAGAGGGAAGG+AGG + chr8.4:32484206-32484225 None:intergenic 50.0%
ACCGTTGAGAACTTGGGAGC+CGG - chr8.4:32485501-32485520 MS.gene95710:CDS 55.0%
ACGGCGGAAAGCAGAAGAAG+AGG - chr8.4:32483809-32483828 MS.gene95710:CDS 55.0%
CCAACGATTCCCATGGCATG+GGG + chr8.4:32484956-32484975 None:intergenic 55.0%
CTCTTGGAGCTGAAGGAAGG+TGG + chr8.4:32484878-32484897 None:intergenic 55.0%
GAATGTTGCGGGATCTACGG+AGG + chr8.4:32484055-32484074 None:intergenic 55.0%
GACAAGAGTCATCGTCGCGA+CGG + chr8.4:32483901-32483920 None:intergenic 55.0%
GCAACAACCTCGTTTCCCTC+CGG - chr8.4:32484225-32484244 MS.gene95710:CDS 55.0%
GCCAACGATTCCCATGGCAT+GGG + chr8.4:32484957-32484976 None:intergenic 55.0%
GGAGCTGAAGGAAGGTGGAA+TGG + chr8.4:32484873-32484892 None:intergenic 55.0%
TCACAAGTGGCGCCACCTAT+GGG - chr8.4:32483923-32483942 MS.gene95710:CDS 55.0%
TCCGGCTCCCAAGTTCTCAA+CGG + chr8.4:32485505-32485524 None:intergenic 55.0%
TGCCAACGATTCCCATGGCA+TGG + chr8.4:32484958-32484977 None:intergenic 55.0%
! GTTAGTACCGGAGGGAAACG+AGG + chr8.4:32484235-32484254 None:intergenic 55.0%
! TCTGGAGTTGCTCCCATAGG+TGG + chr8.4:32483938-32483957 None:intergenic 55.0%
! TGCTTTTCTCTCTGCCTGCC+CGG - chr8.4:32484790-32484809 MS.gene95710:CDS 55.0%
!! GGAGGTTCGAGTTGAGAGGA+AGG + chr8.4:32483880-32483899 None:intergenic 55.0%
!! GGTGAGCACAGCATTGACGA+AGG + chr8.4:32484033-32484052 None:intergenic 55.0%
AAGAGTCATCGTCGCGACGG+AGG + chr8.4:32483898-32483917 None:intergenic 60.0%
CCCCATGCCATGGGAATCGT+TGG - chr8.4:32484953-32484972 MS.gene95710:intron 60.0%
CTCACAAGTGGCGCCACCTA+TGG - chr8.4:32483922-32483941 MS.gene95710:CDS 60.0%
TGTGGTTCCGTGCTGCCACT+GGG - chr8.4:32484123-32484142 MS.gene95710:intron 60.0%
TTCTTGAAGGTGGGGCCCAG+TGG + chr8.4:32484141-32484160 None:intergenic 60.0%
! CATAGTTTCCAGCACCGGGC+AGG + chr8.4:32484807-32484826 None:intergenic 60.0%
! CTGCCCGGTGCTGGAAACTA+TGG - chr8.4:32484805-32484824 MS.gene95710:CDS 60.0%
!! CGACGGAGGTTCGAGTTGAG+AGG + chr8.4:32483884-32483903 None:intergenic 60.0%
CTGTGGTTCCGTGCTGCCAC+TGG - chr8.4:32484122-32484141 MS.gene95710:intron 65.0%
TCTCTCTGCCTGCCCGGTGC+TGG - chr8.4:32484796-32484815 MS.gene95710:CDS 70.0%
GGTGGGGCCCAGTGGCAGCA+CGG + chr8.4:32484133-32484152 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 32483789 32485780 32483789 ID=MS.gene95710
chr8.4 mRNA 32483789 32485780 32483789 ID=MS.gene95710.t1;Parent=MS.gene95710
chr8.4 exon 32485323 32485780 32485323 ID=MS.gene95710.t1.exon1;Parent=MS.gene95710.t1
chr8.4 CDS 32485323 32485780 32485323 ID=cds.MS.gene95710.t1;Parent=MS.gene95710.t1
chr8.4 exon 32484452 32484881 32484452 ID=MS.gene95710.t1.exon2;Parent=MS.gene95710.t1
chr8.4 CDS 32484452 32484881 32484452 ID=cds.MS.gene95710.t1;Parent=MS.gene95710.t1
chr8.4 exon 32484207 32484356 32484207 ID=MS.gene95710.t1.exon3;Parent=MS.gene95710.t1
chr8.4 CDS 32484207 32484356 32484207 ID=cds.MS.gene95710.t1;Parent=MS.gene95710.t1
chr8.4 exon 32483789 32484079 32483789 ID=MS.gene95710.t1.exon4;Parent=MS.gene95710.t1
chr8.4 CDS 32483789 32484079 32483789 ID=cds.MS.gene95710.t1;Parent=MS.gene95710.t1
Gene Sequence

>MS.gene95710

ATGGCGGAGTCAAGTTTGAAACGGCGGAAAGCAGAAGAAGAGGACCGATTGAGTAGTTTACCGGACTCCATTCTATGCCATATACTCTCCTTCCTCTCAACTCGAACCTCCGTCGCGACGATGACTCTTGTCTCTCACAAGTGGCGCCACCTATGGGAGCAACTCCAGATCTTTGACTTCGACTTCGACATCGACGACTGCGAACCTCACTTTTACGACGAAAGTTTCAAAAAATTTGTATCCTTCGTCAATGCTGTGCTCACCCTCCGTAGATCCCGCAACATTCGGAAGTTCCGTCTCAACTGTGATTACCCGGATCCAGACAAGTTTGAGCTGTGGTTCCGTGCTGCCACTGGGCCCCACCTTCAAGAACTCTCTCTCACCGTTCTAAACGCCGATGATTTCGTTAAACTCCCTCCTTCCCTCTTCATCAACTGCAACAACCTCGTTTCCCTCCGGTACTAACCTAATTTCAATCTCTCCATTTTTTTTATTCTTAGTCCTTCAGATAGTGTATGCTAGGACTAGGACTAGGACTAAATTCATAGTAACTGTATAAACTTAGGGGTGCAAGACCATTTTGCTTGCTTCTGCATGTTAGACAAAACCCTAATTTGGTAGTTTCCTCATTTTTAGATTTTGTTTTCCCTATTTTCATTCACAAACCTATAAATAAGGTAGAGTTAGCCTCACATTTGTTTCAAATTTGTTTTTATTCCTATGAAATTGTCAAAATACTCTTGTTTTAATGGTGGAAATGAAATTTGGTATCGATTTTACATATTATTATATCGATGCTCACTTCCATAATTTCATCTCTTGTTCTCTTTCTATTTCCATCATTGAAACAAAACAAATAAAGAATGTTATATATAACCTGTCTTTTGTTAATACTGCAGTCTGCATGGTGTAGAAATCCATATCAAAGTTCAACATTCTCCACTTCATTTTCCATCACTCAAGAGACTCAAACTTGGTGTAGAGACTGTGTATCCGGTAGTTGCTTTTCTCTCTGCCTGCCCGGTGCTGGAAACTATGGATATTAACTTTTTCCTTGAAGACATATCTTTGAACGAAGTTCCCATTCCACCTTCCTTCAGCTCCAAGAGCTTGAAATCCACCAGTGACAATTTCACTTGGACTCACTTTAAGTTTGATATATATCCCCATGCCATGGGAATCGTTGGCAACTTTCATAGTATGGTGGAAGCATTTCTCGATGTCTTTTCCTCACGTGAAAGTGAATTTGTCGACCCTATTCTCAACAACCTCTTCCAAGATAACAAAAACAATGAAATAAACCTACTTTCGCGTCATTTGACATCAAAGGTGAAGTTTTATTTTTATGGTTTGTATTTTTTTATATATTTATATATGTAGTTGGTACTAATACTGCGCCATCACTTGTTATCGTGTACATGCAGTCACCACTTCATGCCCCTGTTCTAAATTATCCAGAATTTCGCAATTTGTTTCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGGTCGACGTGCTTGAAAAATGTCATATGCTTCAAGTTCTCATAATTAAGAGCAGCAAGGTTTGTTGACTTCTCAAGTTTAATTTAATCAATATATGGTATGTCTATATGTGCATGAATGTATGAATCTATTTGTACATACAAATATATTTTTGAGTTGTGGCACGGTGTCCATTGTTGCTTGTAGGAGGAACCATCACCGTTGAGAACTTGGGAGCCGGAGTCAACAACAGTTTCTGAATGTCTCAAATCCCACCTGACTTATATTCACATTGAAGGATATCAAGGATTTGAAGATGAGCTGACATTTGCTGAATATATTTTGCGGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACAAAACAAACAAGTATTTTTCTCTCAAAAGATTGACTGACATACCAAAGGGTTCTGTGTCATGCGAACTTAAATTTGACCCAGCCCCGTCTCCAAATTAA

Protein sequence

>MS.gene95710.t1

MAESSLKRRKAEEEDRLSSLPDSILCHILSFLSTRTSVATMTLVSHKWRHLWEQLQIFDFDFDIDDCEPHFYDESFKKFVSFVNAVLTLRRSRNIRKFRLNCDYPDPDKFELWFRAATGPHLQELSLTVLNADDFVKLPPSLFINCNNLVSLRLHGVEIHIKVQHSPLHFPSLKRLKLGVETVYPVVAFLSACPVLETMDINFFLEDISLNEVPIPPSFSSKSLKSTSDNFTWTHFKFDIYPHAMGIVGNFHSMVEAFLDVFSSRESEFVDPILNNLFQDNKNNEINLLSRHLTSKSPLHAPVLNYPEFRNLFHLKFILPCFNSNLLVDVLEKCHMLQVLIIKSSKEEPSPLRTWEPESTTVSECLKSHLTYIHIEGYQGFEDELTFAEYILRNGLVLKTMLIFVDISMDKTNKYFSLKRLTDIPKGSVSCELKFDPAPSPN