Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073176.t1 | XP_003596703.1 | 90.7 | 356 | 33 | 0 | 1 | 356 | 102 | 457 | 2.00E-180 | 641.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073176.t1 | Q8H1R7 | 31.0 | 348 | 213 | 12 | 18 | 356 | 90 | 419 | 7.7e-24 | 112.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073176.t1 | G7IM68 | 90.7 | 356 | 33 | 0 | 1 | 356 | 102 | 457 | 1.4e-180 | 641.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073176.t1 | MTR_2g083840 | 90.730 | 356 | 33 | 0 | 1 | 356 | 102 | 457 | 0.0 | 636 |
MS.gene073176.t1 | MTR_8g468810 | 57.025 | 363 | 143 | 8 | 1 | 356 | 107 | 463 | 1.55e-128 | 376 |
MS.gene073176.t1 | MTR_8g058970 | 56.430 | 381 | 137 | 9 | 1 | 356 | 101 | 477 | 3.46e-122 | 360 |
MS.gene073176.t1 | MTR_8g062270 | 53.186 | 361 | 152 | 5 | 2 | 355 | 103 | 453 | 3.10e-117 | 347 |
MS.gene073176.t1 | MTR_8g467800 | 52.055 | 365 | 154 | 7 | 3 | 356 | 99 | 453 | 2.14e-106 | 320 |
MS.gene073176.t1 | MTR_5g092960 | 54.247 | 365 | 147 | 6 | 3 | 355 | 105 | 461 | 5.21e-104 | 313 |
MS.gene073176.t1 | MTR_8g468840 | 52.368 | 359 | 157 | 7 | 2 | 354 | 98 | 448 | 8.82e-104 | 313 |
MS.gene073176.t1 | MTR_4g032730 | 48.549 | 379 | 157 | 9 | 2 | 355 | 101 | 466 | 2.71e-96 | 294 |
MS.gene073176.t1 | MTR_8g468810 | 57.778 | 270 | 102 | 7 | 1 | 263 | 107 | 371 | 1.97e-90 | 276 |
MS.gene073176.t1 | MTR_8g014260 | 46.429 | 364 | 179 | 11 | 1 | 356 | 96 | 451 | 5.20e-89 | 275 |
MS.gene073176.t1 | MTR_8g468760 | 48.468 | 359 | 144 | 6 | 2 | 355 | 96 | 418 | 8.89e-87 | 268 |
MS.gene073176.t1 | MTR_8g445780 | 48.710 | 310 | 149 | 7 | 1 | 306 | 86 | 389 | 1.95e-82 | 256 |
MS.gene073176.t1 | MTR_8g468810 | 60.194 | 206 | 78 | 3 | 1 | 206 | 107 | 308 | 1.81e-73 | 231 |
MS.gene073176.t1 | MTR_8g468810 | 60.194 | 206 | 78 | 3 | 1 | 206 | 107 | 308 | 2.57e-73 | 231 |
MS.gene073176.t1 | MTR_8g468810 | 60.194 | 206 | 78 | 3 | 1 | 206 | 107 | 308 | 3.31e-73 | 231 |
MS.gene073176.t1 | MTR_5g092960 | 56.296 | 270 | 106 | 4 | 3 | 263 | 105 | 371 | 4.94e-72 | 229 |
MS.gene073176.t1 | MTR_4g024710 | 45.118 | 297 | 153 | 7 | 63 | 356 | 58 | 347 | 6.48e-70 | 222 |
MS.gene073176.t1 | MTR_8g469020 | 41.351 | 370 | 195 | 9 | 2 | 356 | 89 | 451 | 8.86e-70 | 225 |
MS.gene073176.t1 | MTR_8g014210 | 49.160 | 238 | 113 | 4 | 120 | 356 | 1 | 231 | 7.16e-65 | 206 |
MS.gene073176.t1 | MTR_8g062080 | 39.031 | 351 | 183 | 10 | 15 | 356 | 117 | 445 | 2.24e-61 | 203 |
MS.gene073176.t1 | MTR_8g058965 | 39.946 | 373 | 195 | 9 | 2 | 356 | 95 | 456 | 6.41e-61 | 202 |
MS.gene073176.t1 | MTR_4g050250 | 39.809 | 314 | 170 | 5 | 2 | 298 | 107 | 418 | 6.42e-57 | 191 |
MS.gene073176.t1 | MTR_4g024745 | 43.478 | 276 | 149 | 6 | 61 | 333 | 10 | 281 | 9.14e-57 | 186 |
MS.gene073176.t1 | MTR_8g070950 | 38.567 | 363 | 190 | 12 | 2 | 356 | 97 | 434 | 3.46e-56 | 189 |
MS.gene073176.t1 | MTR_8g062010 | 39.368 | 348 | 187 | 9 | 13 | 356 | 103 | 430 | 1.02e-55 | 188 |
MS.gene073176.t1 | MTR_8g014160 | 39.058 | 361 | 154 | 10 | 1 | 356 | 126 | 425 | 1.70e-55 | 187 |
MS.gene073176.t1 | MTR_8g062310 | 38.123 | 341 | 183 | 9 | 18 | 356 | 114 | 428 | 3.58e-52 | 179 |
MS.gene073176.t1 | MTR_8g467800 | 50.926 | 216 | 96 | 5 | 3 | 213 | 99 | 309 | 1.27e-46 | 162 |
MS.gene073176.t1 | MTR_8g062300 | 34.667 | 375 | 195 | 8 | 14 | 356 | 121 | 477 | 4.54e-45 | 161 |
MS.gene073176.t1 | MTR_8g077460 | 32.782 | 363 | 154 | 16 | 3 | 356 | 94 | 375 | 1.18e-36 | 136 |
MS.gene073176.t1 | MTR_2g086020 | 44.643 | 168 | 85 | 4 | 193 | 356 | 152 | 315 | 1.04e-27 | 111 |
MS.gene073176.t1 | MTR_8g467790 | 31.579 | 304 | 157 | 10 | 2 | 298 | 234 | 493 | 3.86e-27 | 112 |
MS.gene073176.t1 | MTR_4g113810 | 40.805 | 174 | 90 | 6 | 1 | 167 | 1 | 168 | 4.25e-24 | 97.4 |
MS.gene073176.t1 | MTR_5g084070 | 30.499 | 341 | 210 | 14 | 18 | 350 | 100 | 421 | 1.45e-18 | 86.7 |
MS.gene073176.t1 | MTR_4g056040 | 29.651 | 344 | 206 | 12 | 16 | 336 | 125 | 455 | 1.82e-17 | 84.0 |
MS.gene073176.t1 | MTR_4g056070 | 31.975 | 319 | 168 | 15 | 18 | 306 | 137 | 436 | 1.97e-17 | 83.6 |
MS.gene073176.t1 | MTR_5g008950 | 30.043 | 233 | 134 | 9 | 146 | 356 | 140 | 365 | 2.79e-17 | 82.4 |
MS.gene073176.t1 | MTR_4g055990 | 29.178 | 353 | 203 | 13 | 15 | 336 | 131 | 467 | 2.87e-17 | 83.2 |
MS.gene073176.t1 | MTR_4g055990 | 29.178 | 353 | 203 | 13 | 15 | 336 | 131 | 467 | 3.60e-17 | 82.8 |
MS.gene073176.t1 | MTR_3g087260 | 29.483 | 329 | 165 | 11 | 80 | 355 | 142 | 456 | 2.43e-16 | 80.1 |
MS.gene073176.t1 | MTR_5g080710 | 30.571 | 350 | 212 | 15 | 18 | 355 | 123 | 453 | 2.00e-15 | 77.4 |
MS.gene073176.t1 | MTR_8g014230 | 52.727 | 55 | 26 | 0 | 279 | 333 | 31 | 85 | 1.60e-13 | 66.6 |
MS.gene073176.t1 | MTR_7g098510 | 26.923 | 286 | 141 | 12 | 80 | 356 | 165 | 391 | 1.01e-12 | 68.9 |
MS.gene073176.t1 | MTR_4g056020 | 26.836 | 354 | 203 | 14 | 16 | 336 | 95 | 425 | 2.65e-12 | 68.2 |
MS.gene073176.t1 | MTR_7g034120 | 23.513 | 353 | 188 | 13 | 16 | 356 | 26 | 308 | 3.83e-12 | 66.6 |
MS.gene073176.t1 | MTR_0543s0010 | 28.571 | 252 | 139 | 8 | 129 | 355 | 214 | 449 | 5.36e-12 | 67.0 |
MS.gene073176.t1 | MTR_7g033915 | 33.562 | 146 | 71 | 6 | 222 | 355 | 233 | 364 | 1.20e-11 | 65.5 |
MS.gene073176.t1 | MTR_8g014220 | 42.342 | 111 | 48 | 5 | 3 | 107 | 60 | 160 | 5.56e-11 | 60.8 |
MS.gene073176.t1 | MTR_2g036470 | 25.989 | 354 | 192 | 13 | 8 | 354 | 104 | 394 | 6.31e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073176.t1 | AT4G26340 | 31.214 | 346 | 209 | 13 | 21 | 356 | 93 | 419 | 9.55e-28 | 113 |
MS.gene073176.t1 | AT1G32375 | 28.767 | 365 | 225 | 14 | 2 | 356 | 83 | 422 | 2.20e-21 | 95.1 |
MS.gene073176.t1 | AT1G32375 | 28.767 | 365 | 225 | 14 | 2 | 356 | 83 | 422 | 2.20e-21 | 95.1 |
MS.gene073176.t1 | AT1G13780 | 28.882 | 322 | 197 | 12 | 53 | 353 | 142 | 452 | 6.07e-21 | 94.0 |
MS.gene073176.t1 | AT5G56370 | 27.493 | 371 | 210 | 13 | 8 | 355 | 86 | 420 | 9.42e-21 | 93.2 |
MS.gene073176.t1 | AT5G56370 | 27.493 | 371 | 210 | 13 | 8 | 355 | 86 | 420 | 9.42e-21 | 93.2 |
MS.gene073176.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 1.16e-20 | 92.8 |
MS.gene073176.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 1.16e-20 | 92.8 |
MS.gene073176.t1 | AT5G56420 | 28.125 | 352 | 219 | 16 | 16 | 356 | 94 | 422 | 1.16e-20 | 92.8 |
MS.gene073176.t1 | AT5G62970 | 29.305 | 331 | 207 | 13 | 13 | 331 | 112 | 427 | 1.19e-20 | 93.2 |
MS.gene073176.t1 | AT4G10420 | 27.168 | 346 | 215 | 16 | 21 | 355 | 2 | 321 | 1.87e-18 | 85.5 |
MS.gene073176.t1 | AT5G27750 | 28.783 | 337 | 191 | 13 | 53 | 356 | 137 | 457 | 3.61e-18 | 85.9 |
MS.gene073176.t1 | AT5G56410 | 28.775 | 351 | 221 | 14 | 13 | 350 | 105 | 439 | 6.28e-18 | 85.1 |
MS.gene073176.t1 | AT5G44950 | 29.846 | 325 | 191 | 18 | 21 | 322 | 96 | 406 | 1.23e-17 | 84.0 |
MS.gene073176.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.37e-17 | 84.0 |
MS.gene073176.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.37e-17 | 84.0 |
MS.gene073176.t1 | AT4G10400 | 25.915 | 355 | 220 | 13 | 12 | 355 | 86 | 408 | 1.37e-17 | 84.0 |
MS.gene073176.t1 | AT3G54910 | 28.242 | 347 | 218 | 14 | 17 | 356 | 51 | 373 | 1.48e-17 | 83.6 |
MS.gene073176.t1 | AT3G54910 | 28.242 | 347 | 218 | 14 | 17 | 356 | 51 | 373 | 1.48e-17 | 83.6 |
MS.gene073176.t1 | AT3G54910 | 28.242 | 347 | 218 | 14 | 17 | 356 | 51 | 373 | 1.48e-17 | 83.6 |
MS.gene073176.t1 | AT5G56380 | 31.165 | 369 | 201 | 18 | 16 | 356 | 96 | 439 | 1.64e-17 | 84.0 |
MS.gene073176.t1 | AT5G56380 | 31.165 | 369 | 201 | 18 | 16 | 356 | 96 | 439 | 1.64e-17 | 84.0 |
MS.gene073176.t1 | AT3G49030 | 30.033 | 303 | 176 | 13 | 69 | 355 | 158 | 440 | 1.83e-17 | 83.6 |
MS.gene073176.t1 | AT5G53635 | 26.197 | 355 | 221 | 15 | 20 | 355 | 93 | 425 | 2.99e-17 | 82.8 |
MS.gene073176.t1 | AT5G38590 | 27.964 | 329 | 197 | 15 | 7 | 321 | 81 | 383 | 5.67e-17 | 82.0 |
MS.gene073176.t1 | AT5G38570 | 28.727 | 275 | 175 | 9 | 85 | 355 | 118 | 375 | 6.80e-17 | 81.6 |
MS.gene073176.t1 | AT3G50710 | 29.167 | 360 | 216 | 14 | 15 | 356 | 89 | 427 | 1.02e-16 | 81.3 |
MS.gene073176.t1 | AT5G56390 | 26.730 | 318 | 197 | 11 | 59 | 355 | 122 | 424 | 1.07e-16 | 81.3 |
MS.gene073176.t1 | AT5G56400 | 28.094 | 299 | 172 | 11 | 79 | 356 | 179 | 455 | 1.93e-16 | 80.5 |
MS.gene073176.t1 | AT5G56820 | 30.599 | 317 | 179 | 15 | 53 | 353 | 132 | 423 | 3.38e-16 | 79.7 |
MS.gene073176.t1 | AT4G00160 | 29.330 | 358 | 215 | 17 | 18 | 356 | 106 | 444 | 1.51e-15 | 77.8 |
MS.gene073176.t1 | AT3G52690 | 30.479 | 292 | 177 | 12 | 76 | 355 | 20 | 297 | 3.03e-15 | 75.9 |
MS.gene073176.t1 | AT1G51370 | 28.184 | 369 | 216 | 19 | 1 | 351 | 93 | 430 | 3.12e-15 | 77.0 |
MS.gene073176.t1 | AT5G56800 | 26.667 | 285 | 179 | 11 | 82 | 355 | 78 | 343 | 2.02e-14 | 73.9 |
MS.gene073176.t1 | AT1G69630 | 27.385 | 325 | 190 | 12 | 55 | 353 | 144 | 448 | 2.76e-14 | 73.9 |
MS.gene073176.t1 | AT5G56560 | 25.556 | 360 | 234 | 12 | 7 | 356 | 83 | 418 | 3.05e-14 | 73.9 |
MS.gene073176.t1 | AT5G50270 | 26.586 | 331 | 219 | 11 | 15 | 333 | 88 | 406 | 3.41e-14 | 73.6 |
MS.gene073176.t1 | AT5G56810 | 30.595 | 353 | 211 | 13 | 15 | 353 | 99 | 431 | 4.41e-14 | 73.6 |
MS.gene073176.t1 | AT1G78750 | 27.273 | 330 | 188 | 11 | 53 | 353 | 149 | 455 | 4.56e-14 | 73.6 |
MS.gene073176.t1 | AT1G78750 | 27.273 | 330 | 188 | 11 | 53 | 353 | 149 | 455 | 4.56e-14 | 73.6 |
MS.gene073176.t1 | AT5G22670 | 26.287 | 369 | 205 | 15 | 21 | 353 | 102 | 439 | 2.69e-13 | 71.2 |
MS.gene073176.t1 | AT5G56325 | 28.571 | 266 | 168 | 10 | 99 | 355 | 11 | 263 | 4.20e-13 | 68.9 |
MS.gene073176.t1 | AT1G05080 | 28.349 | 321 | 194 | 14 | 53 | 355 | 136 | 438 | 5.77e-13 | 70.1 |
MS.gene073176.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 8.20e-13 | 69.7 |
MS.gene073176.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 8.20e-13 | 69.7 |
MS.gene073176.t1 | AT1G16930 | 24.668 | 377 | 234 | 14 | 9 | 356 | 94 | 449 | 8.20e-13 | 69.7 |
MS.gene073176.t1 | AT5G56370 | 28.244 | 262 | 142 | 9 | 8 | 257 | 86 | 313 | 1.10e-12 | 68.6 |
MS.gene073176.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 20 | 365 | 1.44e-12 | 68.6 |
MS.gene073176.t1 | AT1G66300 | 25.496 | 353 | 219 | 15 | 21 | 353 | 125 | 453 | 2.20e-12 | 68.2 |
MS.gene073176.t1 | AT2G26030 | 27.049 | 366 | 220 | 19 | 20 | 353 | 93 | 443 | 2.23e-12 | 68.2 |
MS.gene073176.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 93 | 438 | 2.67e-12 | 68.2 |
MS.gene073176.t1 | AT2G26030 | 27.273 | 363 | 218 | 19 | 20 | 353 | 93 | 438 | 2.67e-12 | 68.2 |
MS.gene073176.t1 | AT3G26930 | 27.616 | 344 | 211 | 15 | 34 | 356 | 72 | 398 | 4.74e-12 | 67.0 |
MS.gene073176.t1 | AT3G26930 | 27.616 | 344 | 211 | 15 | 34 | 356 | 117 | 443 | 5.81e-12 | 67.0 |
MS.gene073176.t1 | AT5G22700 | 25.429 | 350 | 212 | 16 | 2 | 323 | 81 | 409 | 6.41e-12 | 67.0 |
MS.gene073176.t1 | AT5G22700 | 25.429 | 350 | 212 | 16 | 2 | 323 | 81 | 409 | 6.41e-12 | 67.0 |
MS.gene073176.t1 | AT5G22700 | 25.429 | 350 | 212 | 16 | 2 | 323 | 81 | 409 | 6.41e-12 | 67.0 |
MS.gene073176.t1 | AT5G22700 | 25.429 | 350 | 212 | 16 | 2 | 323 | 81 | 409 | 6.41e-12 | 67.0 |
MS.gene073176.t1 | AT4G00315 | 27.914 | 326 | 198 | 15 | 53 | 355 | 129 | 440 | 6.53e-12 | 67.0 |
MS.gene073176.t1 | AT5G22700 | 25.779 | 353 | 207 | 17 | 2 | 323 | 118 | 446 | 6.80e-12 | 67.0 |
MS.gene073176.t1 | AT1G55030 | 27.796 | 313 | 192 | 15 | 56 | 355 | 130 | 421 | 7.07e-12 | 66.6 |
MS.gene073176.t1 | AT1G55030 | 27.796 | 313 | 192 | 15 | 56 | 355 | 140 | 431 | 7.94e-12 | 66.6 |
MS.gene073176.t1 | AT2G04230 | 27.966 | 354 | 220 | 15 | 21 | 356 | 110 | 446 | 1.26e-11 | 65.9 |
MS.gene073176.t1 | AT1G80470 | 25.466 | 322 | 195 | 16 | 53 | 353 | 137 | 434 | 2.36e-11 | 65.1 |
MS.gene073176.t1 | AT4G14096 | 29.831 | 295 | 175 | 15 | 11 | 286 | 95 | 376 | 3.87e-11 | 64.7 |
MS.gene073176.t1 | AT4G14096 | 29.831 | 295 | 175 | 15 | 11 | 286 | 95 | 376 | 3.87e-11 | 64.7 |
MS.gene073176.t1 | AT1G66290 | 26.220 | 328 | 191 | 15 | 53 | 353 | 147 | 450 | 4.30e-11 | 64.3 |
MS.gene073176.t1 | AT5G27750 | 30.603 | 232 | 132 | 9 | 53 | 259 | 137 | 364 | 4.60e-11 | 63.9 |
MS.gene073176.t1 | AT5G56440 | 28.783 | 337 | 175 | 15 | 53 | 355 | 124 | 429 | 4.69e-11 | 64.3 |
MS.gene073176.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 6.44e-11 | 63.5 |
MS.gene073176.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 6.44e-11 | 63.5 |
MS.gene073176.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 6.44e-11 | 63.5 |
MS.gene073176.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 95 | 353 | 6.44e-11 | 63.5 |
MS.gene073176.t1 | AT5G44960 | 27.273 | 264 | 144 | 11 | 80 | 326 | 153 | 385 | 7.64e-11 | 63.5 |
MS.gene073176.t1 | AT1G06630 | 27.798 | 277 | 166 | 10 | 1 | 261 | 104 | 362 | 7.77e-11 | 63.5 |
Find 76 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTGGATCCGCAGCGCAAC+TGG | 0.164566 | 2.3:+14109189 | MS.gene073176:CDS |
TTGAAGACGATGCTTATTTC+TGG | 0.241668 | 2.3:+14111678 | MS.gene073176:CDS |
TGGTTTATCGTTGGACAAAA+AGG | 0.335804 | 2.3:+14111698 | MS.gene073176:CDS |
CTAGCTGCACTACCTTTCTA+TGG | 0.340754 | 2.3:+14111525 | MS.gene073176:CDS |
TTCCATTGCTCCCGATCGTT+TGG | 0.356798 | 2.3:+14110898 | MS.gene073176:CDS |
TGGGTCTTGTCTTGAGGAAC+TGG | 0.374715 | 2.3:+14109209 | MS.gene073176:CDS |
TCACCGTTGAGAACAACTTT+GGG | 0.377628 | 2.3:+14110960 | MS.gene073176:CDS |
GGAAGGTGGCACACGAAGTC+TGG | 0.379436 | 2.3:-14110921 | None:intergenic |
TCTCCAACTCTATTGACTCC+TGG | 0.398291 | 2.3:+14109172 | MS.gene073176:CDS |
CCCAGTTGCGCTGCGGATCC+AGG | 0.399652 | 2.3:-14109190 | None:intergenic |
TGCTGCCACAGTTGGAAACT+TGG | 0.400230 | 2.3:+14111048 | MS.gene073176:CDS |
AAGTGGGATACGAGACAATT+AGG | 0.402899 | 2.3:-14111573 | None:intergenic |
TTCACCGTTGAGAACAACTT+TGG | 0.408660 | 2.3:+14110959 | MS.gene073176:CDS |
GCTCGGAGGAGATTGAATAA+AGG | 0.413700 | 2.3:-14111130 | None:intergenic |
GGTGAATTTAAACCTCTTCA+AGG | 0.429011 | 2.3:-14110942 | None:intergenic |
TGGCAGTTGGCAGAGCCCTT+TGG | 0.430626 | 2.3:-14111765 | None:intergenic |
AATTCCGAGACATCTATAAC+AGG | 0.431212 | 2.3:-14111298 | None:intergenic |
TGCACTACCTTTCTATGGAT+TGG | 0.434939 | 2.3:+14111530 | MS.gene073176:CDS |
AGCATCGCTGAATGTGATAT+TGG | 0.440141 | 2.3:-14111029 | None:intergenic |
CTCGGAGGAGATTGAATAAA+GGG | 0.442168 | 2.3:-14111129 | None:intergenic |
GCTTATTTCTGGTTTATCGT+TGG | 0.442528 | 2.3:+14111689 | MS.gene073176:CDS |
CAATAGAGTTGGAGAAGAAA+TGG | 0.444606 | 2.3:-14109164 | None:intergenic |
TTGCATGAGATGGAGTTTGC+TGG | 0.461366 | 2.3:+14111630 | MS.gene073176:CDS |
CAAGTCAATCAAACTTAAGT+TGG | 0.478129 | 2.3:-14111785 | None:intergenic |
AGTTGCAGCTTCTTCAATGA+TGG | 0.480179 | 2.3:-14110800 | None:intergenic |
AGGCTAAGATATTTGAGATC+TGG | 0.480834 | 2.3:-14111004 | None:intergenic |
CCTGGATCCGCAGCGCAACT+GGG | 0.481956 | 2.3:+14109190 | MS.gene073176:CDS |
CCATCTCATGCAAACATGCT+TGG | 0.493909 | 2.3:-14111620 | None:intergenic |
CGAAGTCTGGCCAAACGATC+GGG | 0.496458 | 2.3:-14110908 | None:intergenic |
GTTTAATTCTAGAGAGAGCT+CGG | 0.499374 | 2.3:-14111147 | None:intergenic |
CGCAACTGGGTCTTGTCTTG+AGG | 0.500143 | 2.3:+14109203 | MS.gene073176:CDS |
TTGAACTTTATTCACTTCAA+AGG | 0.504563 | 2.3:+14111594 | MS.gene073176:CDS |
CCAAGCATGTTTGCATGAGA+TGG | 0.506332 | 2.3:+14111620 | MS.gene073176:CDS |
GTGTGCCACCTTCCTTGAAG+AGG | 0.506971 | 2.3:+14110930 | MS.gene073176:CDS |
TCACTATTTGCTTCATCTAG+AGG | 0.509315 | 2.3:+14111321 | MS.gene073176:CDS |
TGCCCCTGTTATAGATGTCT+CGG | 0.516230 | 2.3:+14111294 | MS.gene073176:CDS |
AAGTTCTAGTGTCTCGAGGA+TGG | 0.521504 | 2.3:-14110876 | None:intergenic |
GAGAAAACTCAAGCTGAATG+AGG | 0.523281 | 2.3:-14111353 | None:intergenic |
TTCAGCGATGCTGCCACAGT+TGG | 0.523439 | 2.3:+14111040 | MS.gene073176:CDS |
CGAAAGATGCGTCTTTCTTG+TGG | 0.526529 | 2.3:+14109126 | None:intergenic |
GGCCAAACGATCGGGAGCAA+TGG | 0.533751 | 2.3:-14110900 | None:intergenic |
ATCAAACTTAAGTTGGCAGT+TGG | 0.534229 | 2.3:-14111778 | None:intergenic |
TGGTGATATCTACTTGGTGT+TGG | 0.535782 | 2.3:+14110754 | MS.gene073176:CDS |
TTATGTCGAAATGAATTCCA+TGG | 0.542665 | 2.3:+14110832 | MS.gene073176:CDS |
ACGAAGTCTGGCCAAACGAT+CGG | 0.544291 | 2.3:-14110909 | None:intergenic |
TGAAGTGAATAAAGTTCAAG+TGG | 0.545443 | 2.3:-14111590 | None:intergenic |
GCACTAACCTCGTCTCCCTC+AGG | 0.545675 | 2.3:+14109298 | MS.gene073176:CDS |
CACCGTTGAGAACAACTTTG+GGG | 0.549956 | 2.3:+14110961 | MS.gene073176:CDS |
TCTCTGTGGTGATATCTACT+TGG | 0.550066 | 2.3:+14110748 | MS.gene073176:CDS |
ATTATGAGATCTTGAAGCAT+AGG | 0.552931 | 2.3:-14111397 | None:intergenic |
GATCCAGGAGTCAATAGAGT+TGG | 0.557350 | 2.3:-14109175 | None:intergenic |
GCTTGAGAGTAGGTTATCCA+TGG | 0.563182 | 2.3:-14110849 | None:intergenic |
AGTTGGAAACTTGGACAAAG+TGG | 0.563962 | 2.3:+14111057 | MS.gene073176:CDS |
AGTTCTAGTGTCTCGAGGAT+GGG | 0.564338 | 2.3:-14110875 | None:intergenic |
GGCTTTACCTGAGGGAGACG+AGG | 0.571913 | 2.3:-14109305 | None:intergenic |
GAATTCTCAGATATACCAAA+GGG | 0.574326 | 2.3:+14111750 | MS.gene073176:CDS |
AGAAAACTCAAGCTGAATGA+GGG | 0.575669 | 2.3:-14111352 | None:intergenic |
TTAAACCTCTTCAAGGAAGG+TGG | 0.578917 | 2.3:-14110935 | None:intergenic |
AAGAAGCTGCAACTAGACAT+TGG | 0.580979 | 2.3:+14110809 | MS.gene073176:CDS |
TTCCGAGACATCTATAACAG+GGG | 0.581383 | 2.3:-14111296 | None:intergenic |
AGATAGAGAAGACATATTCA+CGG | 0.581627 | 2.3:-14109254 | None:intergenic |
AATTTAAACCTCTTCAAGGA+AGG | 0.584451 | 2.3:-14110938 | None:intergenic |
AGAATTCTCAGATATACCAA+AGG | 0.599686 | 2.3:+14111749 | MS.gene073176:CDS |
AGCCCCAAAGTTGTTCTCAA+CGG | 0.604919 | 2.3:-14110963 | None:intergenic |
AGAAATGGTCAACTTCAGAA+TGG | 0.610128 | 2.3:-14109149 | None:intergenic |
GAAGTGAATAAAGTTCAAGT+GGG | 0.615435 | 2.3:-14111589 | None:intergenic |
ATTCCGAGACATCTATAACA+GGG | 0.634060 | 2.3:-14111297 | None:intergenic |
GTTGTGTTTATCAACAACCA+AGG | 0.637608 | 2.3:+14111177 | MS.gene073176:CDS |
CCTATGTATCCCAGTCTCTG+TGG | 0.640791 | 2.3:+14110734 | MS.gene073176:intron |
CGCTGAATGTGATATTGGTG+AGG | 0.643173 | 2.3:-14111024 | None:intergenic |
GGATGGGACAGCTTGAGAGT+AGG | 0.646261 | 2.3:-14110859 | None:intergenic |
TTTGTCCAAGTTTCCAACTG+TGG | 0.646363 | 2.3:-14111053 | None:intergenic |
TGGAAAGTTCTAGTGTCTCG+AGG | 0.655753 | 2.3:-14110880 | None:intergenic |
GACAAGACCCAGTTGCGCTG+CGG | 0.671718 | 2.3:-14109197 | None:intergenic |
TCTCATAATTCAGAACGACA+AGG | 0.693913 | 2.3:+14111411 | MS.gene073176:CDS |
TAATTCTAGAGAGAGCTCGG+AGG | 0.699846 | 2.3:-14111144 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAATAAAAATAGC+TGG | + | chr2.3:14109433-14109452 | MS.gene073176:intron | 10.0% |
!! | AAAATTTCAATTAATATTTC+AGG | + | chr2.3:14109586-14109605 | MS.gene073176:intron | 10.0% |
!! | AAATTTCAATTAATATTTCA+GGG | + | chr2.3:14109587-14109606 | MS.gene073176:intron | 10.0% |
!! | ATAAAAATAAACTTTATCTT+GGG | - | chr2.3:14110594-14110613 | None:intergenic | 10.0% |
!! | TAATGTCTTTAAATTAAAAA+AGG | + | chr2.3:14110102-14110121 | MS.gene073176:intron | 10.0% |
!! | TTGTAGTAAAATTTATTAAA+TGG | + | chr2.3:14110339-14110358 | MS.gene073176:intron | 10.0% |
!! | AATCAATTTATAAAGTTTCA+AGG | + | chr2.3:14110552-14110571 | MS.gene073176:intron | 15.0% |
!! | AATTTCAATTAATATTTCAG+GGG | + | chr2.3:14109588-14109607 | MS.gene073176:intron | 15.0% |
!! | GATAAAAATAAACTTTATCT+TGG | - | chr2.3:14110595-14110614 | None:intergenic | 15.0% |
!!! | TCCATTTTTTTTAACTAAAT+GGG | + | chr2.3:14110270-14110289 | MS.gene073176:intron | 15.0% |
!! | ACCCATTTAGTTAAAAAAAA+TGG | - | chr2.3:14110274-14110293 | None:intergenic | 20.0% |
!! | ACTTCTTAAGAAGTTAAAAA+AGG | + | chr2.3:14110501-14110520 | MS.gene073176:intron | 20.0% |
!! | CATAATTGTTATGTTATGTT+AGG | - | chr2.3:14110707-14110726 | None:intergenic | 20.0% |
!! | CATTTAGTTAAAAAAAATGG+AGG | - | chr2.3:14110271-14110290 | None:intergenic | 20.0% |
!!! | CTCCATTTTTTTTAACTAAA+TGG | + | chr2.3:14110269-14110288 | MS.gene073176:intron | 20.0% |
!!! | TTTTTTAACTTCTTAAGAAG+TGG | - | chr2.3:14110502-14110521 | None:intergenic | 20.0% |
! | AATATTTCCATTTCACAGTA+AGG | + | chr2.3:14110413-14110432 | MS.gene073176:intron | 25.0% |
! | ATCTTCTTAACTAGTGTATT+AGG | + | chr2.3:14110612-14110631 | MS.gene073176:intron | 25.0% |
! | CATATCACATGTAACTTAAA+GGG | - | chr2.3:14110665-14110684 | None:intergenic | 25.0% |
! | GATAACTATTCACACATTTA+GGG | + | chr2.3:14109915-14109934 | MS.gene073176:intron | 25.0% |
! | GTGTTAATTTCCATACATTT+AGG | + | chr2.3:14109394-14109413 | MS.gene073176:intron | 25.0% |
! | TACTGTGAAATGGAAATATT+GGG | - | chr2.3:14110413-14110432 | None:intergenic | 25.0% |
! | TCATATCACATGTAACTTAA+AGG | - | chr2.3:14110666-14110685 | None:intergenic | 25.0% |
! | TTACTGTGAAATGGAAATAT+TGG | - | chr2.3:14110414-14110433 | None:intergenic | 25.0% |
! | TTGAACTTTATTCACTTCAA+AGG | + | chr2.3:14111594-14111613 | MS.gene073176:CDS | 25.0% |
!! | AATTTCCATACATTTAGGTT+AGG | + | chr2.3:14109399-14109418 | MS.gene073176:intron | 25.0% |
!! | CTAATTTTATCAAACACAAC+AGG | - | chr2.3:14109517-14109536 | None:intergenic | 25.0% |
!!! | AAGTTGATGTATGATGTATT+TGG | + | chr2.3:14109813-14109832 | MS.gene073176:intron | 25.0% |
!!! | CTGAGAATTCTTTTAGAATA+AGG | - | chr2.3:14111740-14111759 | None:intergenic | 25.0% |
AATGAAAACTTAACTCACCT+TGG | - | chr2.3:14111197-14111216 | None:intergenic | 30.0% | |
AATTTAAACCTCTTCAAGGA+AGG | - | chr2.3:14110941-14110960 | None:intergenic | 30.0% | |
AGAATTCTCAGATATACCAA+AGG | + | chr2.3:14111749-14111768 | MS.gene073176:CDS | 30.0% | |
AGATAGAGAAGACATATTCA+CGG | - | chr2.3:14109257-14109276 | None:intergenic | 30.0% | |
AGTGTATTAGGACGTATTTA+GGG | + | chr2.3:14110624-14110643 | MS.gene073176:intron | 30.0% | |
ATTATGAGATCTTGAAGCAT+AGG | - | chr2.3:14111400-14111419 | None:intergenic | 30.0% | |
CATACAATTACTAGTCACTT+GGG | + | chr2.3:14109369-14109388 | MS.gene073176:intron | 30.0% | |
GAAGTGAATAAAGTTCAAGT+GGG | - | chr2.3:14111592-14111611 | None:intergenic | 30.0% | |
GAATTCTCAGATATACCAAA+GGG | + | chr2.3:14111750-14111769 | MS.gene073176:CDS | 30.0% | |
GGATAACTATTCACACATTT+AGG | + | chr2.3:14109914-14109933 | MS.gene073176:intron | 30.0% | |
GTTATGTTAGGTTATCATCA+TGG | - | chr2.3:14110695-14110714 | None:intergenic | 30.0% | |
TAGTGTATTAGGACGTATTT+AGG | + | chr2.3:14110623-14110642 | MS.gene073176:intron | 30.0% | |
TGAAGTGAATAAAGTTCAAG+TGG | - | chr2.3:14111593-14111612 | None:intergenic | 30.0% | |
TTATGTCGAAATGAATTCCA+TGG | + | chr2.3:14110832-14110851 | MS.gene073176:CDS | 30.0% | |
! | AGGAACATTTTTGCTCTTTT+TGG | - | chr2.3:14111556-14111575 | None:intergenic | 30.0% |
! | GTTAAAAAAAATGGAGGTGT+TGG | - | chr2.3:14110265-14110284 | None:intergenic | 30.0% |
!! | TGACAAGAGAGAGTATTATA+AGG | + | chr2.3:14109893-14109912 | MS.gene073176:intron | 30.0% |
AAACATCTGCTACGAAAGAT+TGG | - | chr2.3:14109329-14109348 | None:intergenic | 35.0% | |
AATTCCGAGACATCTATAAC+AGG | - | chr2.3:14111301-14111320 | None:intergenic | 35.0% | |
AGAAAACTCAAGCTGAATGA+GGG | - | chr2.3:14111355-14111374 | None:intergenic | 35.0% | |
AGAAATGGTCAACTTCAGAA+TGG | - | chr2.3:14109152-14109171 | None:intergenic | 35.0% | |
ATTCCGAGACATCTATAACA+GGG | - | chr2.3:14111300-14111319 | None:intergenic | 35.0% | |
CAATAGAGTTGGAGAAGAAA+TGG | - | chr2.3:14109167-14109186 | None:intergenic | 35.0% | |
CCAAGTGACTAGTAATTGTA+TGG | - | chr2.3:14109371-14109390 | None:intergenic | 35.0% | |
CCATACAATTACTAGTCACT+TGG | + | chr2.3:14109368-14109387 | MS.gene073176:intron | 35.0% | |
GGTGAATTTAAACCTCTTCA+AGG | - | chr2.3:14110945-14110964 | None:intergenic | 35.0% | |
GTTGTGTTTATCAACAACCA+AGG | + | chr2.3:14111177-14111196 | MS.gene073176:CDS | 35.0% | |
TCACTATTTGCTTCATCTAG+AGG | + | chr2.3:14111321-14111340 | MS.gene073176:CDS | 35.0% | |
TCTCATAATTCAGAACGACA+AGG | + | chr2.3:14111411-14111430 | MS.gene073176:CDS | 35.0% | |
TGGTTTATCGTTGGACAAAA+AGG | + | chr2.3:14111698-14111717 | MS.gene073176:CDS | 35.0% | |
TTGAAGACGATGCTTATTTC+TGG | + | chr2.3:14111678-14111697 | MS.gene073176:CDS | 35.0% | |
! | AGGCTAAGATATTTGAGATC+TGG | - | chr2.3:14111007-14111026 | None:intergenic | 35.0% |
! | GTTTAATTCTAGAGAGAGCT+CGG | - | chr2.3:14111150-14111169 | None:intergenic | 35.0% |
!! | AAAAAAATGGAGGTGTTGGT+TGG | - | chr2.3:14110261-14110280 | None:intergenic | 35.0% |
!! | AACAGATTCATTTTCAGGAG+TGG | - | chr2.3:14111107-14111126 | None:intergenic | 35.0% |
!! | ATCAAACTTAAGTTGGCAGT+TGG | - | chr2.3:14111781-14111800 | None:intergenic | 35.0% |
!! | GCTTATTTCTGGTTTATCGT+TGG | + | chr2.3:14111689-14111708 | MS.gene073176:CDS | 35.0% |
!! | TTTTTGGCCAATCCATAGAA+AGG | - | chr2.3:14111540-14111559 | None:intergenic | 35.0% |
AAGAAGCTGCAACTAGACAT+TGG | + | chr2.3:14110809-14110828 | MS.gene073176:CDS | 40.0% | |
AAGTGGGATACGAGACAATT+AGG | - | chr2.3:14111576-14111595 | None:intergenic | 40.0% | |
ACCACCATTATGGATGCTTT+AGG | + | chr2.3:14110470-14110489 | MS.gene073176:intron | 40.0% | |
AGCATCGCTGAATGTGATAT+TGG | - | chr2.3:14111032-14111051 | None:intergenic | 40.0% | |
AGCTATAAGCTAGCAGATAG+CGG | + | chr2.3:14109473-14109492 | MS.gene073176:intron | 40.0% | |
AGGTGAAACAACCACCATTA+TGG | + | chr2.3:14110460-14110479 | MS.gene073176:intron | 40.0% | |
AGTAAGGTCCCTATTTAGCT+CGG | + | chr2.3:14110429-14110448 | MS.gene073176:intron | 40.0% | |
AGTTGCAGCTTCTTCAATGA+TGG | - | chr2.3:14110803-14110822 | None:intergenic | 40.0% | |
AGTTGGAAACTTGGACAAAG+TGG | + | chr2.3:14111057-14111076 | MS.gene073176:CDS | 40.0% | |
ATAGGGACCTTACTGTGAAA+TGG | - | chr2.3:14110423-14110442 | None:intergenic | 40.0% | |
CAACATGAGACGACTTAACA+AGG | - | chr2.3:14111495-14111514 | None:intergenic | 40.0% | |
CAGAGCCTAACCTAAATGTA+TGG | - | chr2.3:14109407-14109426 | None:intergenic | 40.0% | |
CCACCATTATGGATGCTTTA+GGG | + | chr2.3:14110471-14110490 | MS.gene073176:intron | 40.0% | |
CTCGGAGGAGATTGAATAAA+GGG | - | chr2.3:14111132-14111151 | None:intergenic | 40.0% | |
GAGAAAACTCAAGCTGAATG+AGG | - | chr2.3:14111356-14111375 | None:intergenic | 40.0% | |
GATGCCATAAGTAACCCTAA+GGG | - | chr2.3:14110178-14110197 | None:intergenic | 40.0% | |
GGAGGAATGTGGTACTTATT+AGG | - | chr2.3:14110240-14110259 | None:intergenic | 40.0% | |
GTTACTTATGGCATCCACAA+TGG | + | chr2.3:14110183-14110202 | MS.gene073176:intron | 40.0% | |
GTTGGACAAAAAGGAGAAGT+GGG | + | chr2.3:14111707-14111726 | MS.gene073176:CDS | 40.0% | |
TAGATATCACCACAGAGACT+GGG | - | chr2.3:14110746-14110765 | None:intergenic | 40.0% | |
TCACCGTTGAGAACAACTTT+GGG | + | chr2.3:14110960-14110979 | MS.gene073176:CDS | 40.0% | |
TCTCTGTGGTGATATCTACT+TGG | + | chr2.3:14110748-14110767 | MS.gene073176:CDS | 40.0% | |
TGCACTACCTTTCTATGGAT+TGG | + | chr2.3:14111530-14111549 | MS.gene073176:CDS | 40.0% | |
TTAAACCTCTTCAAGGAAGG+TGG | - | chr2.3:14110938-14110957 | None:intergenic | 40.0% | |
TTCACCGTTGAGAACAACTT+TGG | + | chr2.3:14110959-14110978 | MS.gene073176:CDS | 40.0% | |
TTCCGAGACATCTATAACAG+GGG | - | chr2.3:14111299-14111318 | None:intergenic | 40.0% | |
TTTGTCCAAGTTTCCAACTG+TGG | - | chr2.3:14111056-14111075 | None:intergenic | 40.0% | |
! | ACTTAGCACCGAGCTAAATA+GGG | - | chr2.3:14110440-14110459 | None:intergenic | 40.0% |
! | CACACATTTAGGGTGTGTTT+GGG | + | chr2.3:14109925-14109944 | MS.gene073176:intron | 40.0% |
! | GCTGGCTATGTTTTACGAAA+TGG | + | chr2.3:14111648-14111667 | MS.gene073176:CDS | 40.0% |
! | GGGTCAACAGATTCATTTTC+AGG | - | chr2.3:14111112-14111131 | None:intergenic | 40.0% |
! | TACTTAGCACCGAGCTAAAT+AGG | - | chr2.3:14110441-14110460 | None:intergenic | 40.0% |
! | TCACACATTTAGGGTGTGTT+TGG | + | chr2.3:14109924-14109943 | MS.gene073176:intron | 40.0% |
! | TGACCCTAAAGCATCCATAA+TGG | - | chr2.3:14110477-14110496 | None:intergenic | 40.0% |
!! | GAAAGATTGGCTTTACCTGA+GGG | - | chr2.3:14109316-14109335 | None:intergenic | 40.0% |
!! | TATTTAGCTCGGTGCTAAGT+AGG | + | chr2.3:14110440-14110459 | MS.gene073176:intron | 40.0% |
!! | TGGTGATATCTACTTGGTGT+TGG | + | chr2.3:14110754-14110773 | MS.gene073176:CDS | 40.0% |
AATATTGGGTGTGTTGCCCA+TGG | - | chr2.3:14110399-14110418 | None:intergenic | 45.0% | |
AGCCCCAAAGTTGTTCTCAA+CGG | - | chr2.3:14110966-14110985 | None:intergenic | 45.0% | |
CACACCCTTAGGGTTACTTA+TGG | + | chr2.3:14110171-14110190 | MS.gene073176:intron | 45.0% | |
CACCGTTGAGAACAACTTTG+GGG | + | chr2.3:14110961-14110980 | MS.gene073176:CDS | 45.0% | |
CCAAGCATGTTTGCATGAGA+TGG | + | chr2.3:14111620-14111639 | MS.gene073176:CDS | 45.0% | |
CCATCTCATGCAAACATGCT+TGG | - | chr2.3:14111623-14111642 | None:intergenic | 45.0% | |
CGCTGAATGTGATATTGGTG+AGG | - | chr2.3:14111027-14111046 | None:intergenic | 45.0% | |
CGTTGGACAAAAAGGAGAAG+TGG | + | chr2.3:14111706-14111725 | MS.gene073176:CDS | 45.0% | |
CTAGCTGCACTACCTTTCTA+TGG | + | chr2.3:14111525-14111544 | MS.gene073176:CDS | 45.0% | |
GATCCAGGAGTCAATAGAGT+TGG | - | chr2.3:14109178-14109197 | None:intergenic | 45.0% | |
GCTCGGAGGAGATTGAATAA+AGG | - | chr2.3:14111133-14111152 | None:intergenic | 45.0% | |
GCTTGAGAGTAGGTTATCCA+TGG | - | chr2.3:14110852-14110871 | None:intergenic | 45.0% | |
GGATGCCATAAGTAACCCTA+AGG | - | chr2.3:14110179-14110198 | None:intergenic | 45.0% | |
GTAGATATCACCACAGAGAC+TGG | - | chr2.3:14110747-14110766 | None:intergenic | 45.0% | |
TCTTCCCAAACACACCCTTA+GGG | + | chr2.3:14110161-14110180 | MS.gene073176:intron | 45.0% | |
TGCCCCTGTTATAGATGTCT+CGG | + | chr2.3:14111294-14111313 | MS.gene073176:CDS | 45.0% | |
TGTGAGATCCATTTAGCCAC+TGG | - | chr2.3:14110213-14110232 | None:intergenic | 45.0% | |
TGTGTTTGGGAAGAGGGTTT+AGG | + | chr2.3:14109938-14109957 | MS.gene073176:intron | 45.0% | |
TGTGTTTGGGAAGAGGGTTT+AGG | - | chr2.3:14109957-14109938 | None:intergenic | 45.0% | |
TGTTGTCTGTGTACAAGCAG+TGG | + | chr2.3:14111263-14111282 | MS.gene073176:intron | 45.0% | |
TTAGGGTGTGTTTGGGAAGA+GGG | + | chr2.3:14109932-14109951 | MS.gene073176:intron | 45.0% | |
TTGCATGAGATGGAGTTTGC+TGG | + | chr2.3:14111630-14111649 | MS.gene073176:CDS | 45.0% | |
TTTGGGAAGAGGGTTTAGGA+GGG | + | chr2.3:14109942-14109961 | MS.gene073176:intron | 45.0% | |
TTTGGGAAGAGGGTTTAGGA+GGG | - | chr2.3:14109961-14109942 | None:intergenic | 45.0% | |
! | AAGTTCTAGTGTCTCGAGGA+TGG | - | chr2.3:14110879-14110898 | None:intergenic | 45.0% |
! | AGAGTGTCCTTCCATTCCAT+GGG | + | chr2.3:14110380-14110399 | MS.gene073176:intron | 45.0% |
! | AGTAACCCTAAGGGTGTGTT+TGG | - | chr2.3:14110169-14110188 | None:intergenic | 45.0% |
! | AGTTCTAGTGTCTCGAGGAT+GGG | - | chr2.3:14110878-14110897 | None:intergenic | 45.0% |
! | CCCTAAAGCATCCATAATGG+TGG | - | chr2.3:14110474-14110493 | None:intergenic | 45.0% |
! | GCTTTAAGCTCGTGAGAGAA+TGG | + | chr2.3:14109697-14109716 | MS.gene073176:intron | 45.0% |
! | GTAACCCTAAGGGTGTGTTT+GGG | - | chr2.3:14110168-14110187 | None:intergenic | 45.0% |
! | TAAGGGTGTGTTTGGGAAGA+GGG | - | chr2.3:14110161-14110180 | None:intergenic | 45.0% |
! | TAATTCTAGAGAGAGCTCGG+AGG | - | chr2.3:14111147-14111166 | None:intergenic | 45.0% |
! | TGGAAAGTTCTAGTGTCTCG+AGG | - | chr2.3:14110883-14110902 | None:intergenic | 45.0% |
! | TTTAGGGTGTGTTTGGGAAG+AGG | + | chr2.3:14109931-14109950 | MS.gene073176:intron | 45.0% |
!! | AAAATGGAGGTGTTGGTTGG+AGG | - | chr2.3:14110258-14110277 | None:intergenic | 45.0% |
!! | CGAAAGATTGGCTTTACCTG+AGG | - | chr2.3:14109317-14109336 | None:intergenic | 45.0% |
!! | TCTCCAACTCTATTGACTCC+TGG | + | chr2.3:14109172-14109191 | MS.gene073176:CDS | 45.0% |
AAGAGGGTTTAGGAGGGGAA+GGG | + | chr2.3:14109948-14109967 | MS.gene073176:intron | 50.0% | |
AAGAGGGTTTAGGAGGGGAA+GGG | - | chr2.3:14109967-14109948 | None:intergenic | 50.0% | |
ACGAAGTCTGGCCAAACGAT+CGG | - | chr2.3:14110912-14110931 | None:intergenic | 50.0% | |
ATGGAGCTCCAGTGGCTAAA+TGG | + | chr2.3:14110202-14110221 | MS.gene073176:intron | 50.0% | |
CCACAGAGACTGGGATACAT+AGG | - | chr2.3:14110737-14110756 | None:intergenic | 50.0% | |
CCTATGTATCCCAGTCTCTG+TGG | + | chr2.3:14110734-14110753 | MS.gene073176:intron | 50.0% | |
CTCTTCCCAAACACACCCTT+AGG | + | chr2.3:14110160-14110179 | MS.gene073176:intron | 50.0% | |
GTTTGGGAAGAGGGTTTAGG+AGG | + | chr2.3:14109941-14109960 | MS.gene073176:intron | 50.0% | |
GTTTGGGAAGAGGGTTTAGG+AGG | - | chr2.3:14109960-14109941 | None:intergenic | 50.0% | |
TGCTGCCACAGTTGGAAACT+TGG | + | chr2.3:14111048-14111067 | MS.gene073176:CDS | 50.0% | |
TGTGTTGCCCATGGAATGGA+AGG | - | chr2.3:14110390-14110409 | None:intergenic | 50.0% | |
TTCCATTGCTCCCGATCGTT+TGG | + | chr2.3:14110898-14110917 | MS.gene073176:CDS | 50.0% | |
TTGGGAAGAGGGTTTAGGAG+GGG | + | chr2.3:14109943-14109962 | MS.gene073176:intron | 50.0% | |
TTGGGAAGAGGGTTTAGGAG+GGG | - | chr2.3:14109962-14109943 | None:intergenic | 50.0% | |
! | CTAAGGGTGTGTTTGGGAAG+AGG | - | chr2.3:14110162-14110181 | None:intergenic | 50.0% |
! | TGGGTCTTGTCTTGAGGAAC+TGG | + | chr2.3:14109209-14109228 | MS.gene073176:CDS | 50.0% |
!! | AGGTGTTGGTTGGAGGAATG+TGG | - | chr2.3:14110251-14110270 | None:intergenic | 50.0% |
!! | GAGAGTGTCCTTCCATTCCA+TGG | + | chr2.3:14110379-14110398 | MS.gene073176:intron | 50.0% |
CATCCACAATGGAGCTCCAG+TGG | + | chr2.3:14110194-14110213 | MS.gene073176:intron | 55.0% | |
CGAAGTCTGGCCAAACGATC+GGG | - | chr2.3:14110911-14110930 | None:intergenic | 55.0% | |
GAAGAGGGTTTAGGAGGGGA+AGG | + | chr2.3:14109947-14109966 | MS.gene073176:intron | 55.0% | |
GAAGAGGGTTTAGGAGGGGA+AGG | - | chr2.3:14109966-14109947 | None:intergenic | 55.0% | |
GGATGGGACAGCTTGAGAGT+AGG | - | chr2.3:14110862-14110881 | None:intergenic | 55.0% | |
GTAGTGCAGCTAGACGCTGT+AGG | - | chr2.3:14111518-14111537 | None:intergenic | 55.0% | |
GTGTGCCACCTTCCTTGAAG+AGG | + | chr2.3:14110930-14110949 | MS.gene073176:CDS | 55.0% | |
TAGCCACTGGAGCTCCATTG+TGG | - | chr2.3:14110200-14110219 | None:intergenic | 55.0% | |
TGGGTGTGTTGCCCATGGAA+TGG | - | chr2.3:14110394-14110413 | None:intergenic | 55.0% | |
TTCAGCGATGCTGCCACAGT+TGG | + | chr2.3:14111040-14111059 | MS.gene073176:CDS | 55.0% | |
! | CGCAACTGGGTCTTGTCTTG+AGG | + | chr2.3:14109203-14109222 | MS.gene073176:CDS | 55.0% |
!! | CTAGCAGATAGCGGACAAGC+TGG | + | chr2.3:14109482-14109501 | MS.gene073176:intron | 55.0% |
AGGGTTTAGGAGGGGAAGGG+AGG | + | chr2.3:14109951-14109970 | MS.gene073176:intron | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | - | chr2.3:14109970-14109951 | None:intergenic | 60.0% | |
GACAAGACCCAGTTGCGCTG+CGG | - | chr2.3:14109200-14109219 | None:intergenic | 60.0% | |
GCACTAACCTCGTCTCCCTC+AGG | + | chr2.3:14109298-14109317 | MS.gene073176:CDS | 60.0% | |
GGAAGGTGGCACACGAAGTC+TGG | - | chr2.3:14110924-14110943 | None:intergenic | 60.0% | |
GGCCAAACGATCGGGAGCAA+TGG | - | chr2.3:14110903-14110922 | None:intergenic | 60.0% | |
GGCTTTACCTGAGGGAGACG+AGG | - | chr2.3:14109308-14109327 | None:intergenic | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | + | chr2.3:14109952-14109971 | MS.gene073176:intron | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | - | chr2.3:14109971-14109952 | None:intergenic | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | + | chr2.3:14109953-14109972 | MS.gene073176:intron | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | - | chr2.3:14109972-14109953 | None:intergenic | 60.0% | |
TGGCAGTTGGCAGAGCCCTT+TGG | - | chr2.3:14111768-14111787 | None:intergenic | 60.0% | |
CCTGGATCCGCAGCGCAACT+GGG | + | chr2.3:14109190-14109209 | MS.gene073176:CDS | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | + | chr2.3:14109957-14109976 | MS.gene073176:intron | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | - | chr2.3:14109976-14109957 | None:intergenic | 65.0% | |
TCCTGGATCCGCAGCGCAAC+TGG | + | chr2.3:14109189-14109208 | MS.gene073176:CDS | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | + | chr2.3:14109956-14109975 | MS.gene073176:intron | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | - | chr2.3:14109975-14109956 | None:intergenic | 65.0% | |
CCCAGTTGCGCTGCGGATCC+AGG | - | chr2.3:14109193-14109212 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 14109132 | 14111803 | 14109132 | ID=MS.gene073176 |
chr2.3 | mRNA | 14109132 | 14111803 | 14109132 | ID=MS.gene073176.t1;Parent=MS.gene073176 |
chr2.3 | exon | 14109132 | 14109319 | 14109132 | ID=MS.gene073176.t1.exon1;Parent=MS.gene073176.t1 |
chr2.3 | CDS | 14109132 | 14109319 | 14109132 | ID=cds.MS.gene073176.t1;Parent=MS.gene073176.t1 |
chr2.3 | exon | 14110748 | 14111198 | 14110748 | ID=MS.gene073176.t1.exon2;Parent=MS.gene073176.t1 |
chr2.3 | CDS | 14110748 | 14111198 | 14110748 | ID=cds.MS.gene073176.t1;Parent=MS.gene073176.t1 |
chr2.3 | exon | 14111283 | 14111432 | 14111283 | ID=MS.gene073176.t1.exon3;Parent=MS.gene073176.t1 |
chr2.3 | CDS | 14111283 | 14111432 | 14111283 | ID=cds.MS.gene073176.t1;Parent=MS.gene073176.t1 |
chr2.3 | exon | 14111522 | 14111803 | 14111522 | ID=MS.gene073176.t1.exon4;Parent=MS.gene073176.t1 |
chr2.3 | CDS | 14111522 | 14111803 | 14111522 | ID=cds.MS.gene073176.t1;Parent=MS.gene073176.t1 |
Gene Sequence |
Protein sequence |