AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017193


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017193.t1 MTR_5g092960 84.774 486 43 2 1 479 1 462 0.0 776
MS.gene017193.t1 MTR_5g092960 84.091 396 32 2 1 389 1 372 0.0 610
MS.gene017193.t1 MTR_8g062270 60.341 469 152 6 16 478 13 453 0.0 535
MS.gene017193.t1 MTR_8g468840 62.069 464 146 8 19 479 14 450 0.0 514
MS.gene017193.t1 MTR_8g468760 56.751 474 137 11 14 478 4 418 2.73e-162 466
MS.gene017193.t1 MTR_8g467800 54.184 478 177 9 9 478 9 452 1.29e-159 460
MS.gene017193.t1 MTR_4g032730 50.000 502 189 9 5 479 1 467 3.78e-151 439
MS.gene017193.t1 MTR_2g083840 50.531 471 191 9 17 478 19 456 2.43e-134 395
MS.gene017193.t1 MTR_8g468810 46.748 492 206 14 4 478 10 462 3.93e-130 385
MS.gene017193.t1 MTR_8g058970 48.193 498 190 14 14 478 14 476 6.64e-130 385
MS.gene017193.t1 MTR_8g468810 46.734 398 167 11 4 390 10 373 7.83e-103 312
MS.gene017193.t1 MTR_8g014260 43.004 486 224 17 9 478 2 450 2.71e-99 306
MS.gene017193.t1 MTR_8g467800 51.343 335 124 8 9 338 9 309 8.92e-94 288
MS.gene017193.t1 MTR_8g468810 48.036 331 135 8 4 330 10 307 2.58e-90 278
MS.gene017193.t1 MTR_8g468810 48.036 331 135 8 4 330 10 307 2.59e-90 278
MS.gene017193.t1 MTR_8g469020 39.666 479 235 11 19 478 7 450 4.12e-90 282
MS.gene017193.t1 MTR_8g468810 48.036 331 135 8 4 330 10 307 5.50e-90 278
MS.gene017193.t1 MTR_8g445780 42.494 433 196 14 8 433 2 388 3.03e-86 270
MS.gene017193.t1 MTR_8g058965 40.162 493 238 14 5 478 1 455 7.79e-85 269
MS.gene017193.t1 MTR_8g070950 38.351 485 236 15 5 478 1 433 1.61e-79 254
MS.gene017193.t1 MTR_8g062310 35.729 473 237 12 11 478 17 427 1.09e-71 234
MS.gene017193.t1 MTR_4g050250 38.356 438 218 11 10 426 12 418 8.54e-71 231
MS.gene017193.t1 MTR_8g062010 36.093 471 240 13 19 478 9 429 1.49e-70 231
MS.gene017193.t1 MTR_8g062080 35.699 479 232 15 19 478 23 444 2.34e-69 228
MS.gene017193.t1 MTR_8g062300 33.066 499 273 13 6 478 13 476 6.26e-61 207
MS.gene017193.t1 MTR_8g014210 50.218 229 104 5 253 478 9 230 3.44e-58 192
MS.gene017193.t1 MTR_4g024710 43.243 296 148 11 191 478 63 346 1.53e-56 191
MS.gene017193.t1 MTR_8g014160 40.290 345 160 14 2 338 32 338 1.80e-46 167
MS.gene017193.t1 MTR_8g014160 44.595 74 39 1 407 478 351 424 1.25e-11 67.0
MS.gene017193.t1 MTR_4g024745 42.294 279 141 11 189 460 15 280 6.94e-46 161
MS.gene017193.t1 MTR_8g467790 32.452 416 201 15 18 424 147 491 1.48e-42 158
MS.gene017193.t1 MTR_8g077460 37.165 261 124 10 9 262 2 229 7.70e-34 131
MS.gene017193.t1 MTR_8g077460 37.963 216 117 8 270 478 169 374 8.99e-28 114
MS.gene017193.t1 MTR_5g021550 46.452 155 74 6 12 161 12 162 4.43e-33 123
MS.gene017193.t1 MTR_5g084070 29.399 466 265 18 15 471 9 419 3.65e-30 122
MS.gene017193.t1 MTR_5g080710 29.211 469 269 20 15 471 29 446 4.52e-30 122
MS.gene017193.t1 MTR_8g014290 43.421 152 75 6 19 161 10 159 9.55e-29 111
MS.gene017193.t1 MTR_2g007450 26.141 482 266 14 12 476 9 417 4.17e-28 116
MS.gene017193.t1 MTR_6g022500 26.004 473 245 15 14 476 96 473 6.53e-27 113
MS.gene017193.t1 MTR_1089s0010 26.514 479 237 15 14 479 3 379 1.32e-26 111
MS.gene017193.t1 MTR_4g024720 39.267 191 88 8 6 172 4 190 2.71e-26 106
MS.gene017193.t1 MTR_3g107100 26.708 483 247 15 11 476 3 395 3.72e-26 110
MS.gene017193.t1 MTR_7g026500 25.261 479 241 18 19 478 14 394 6.67e-24 103
MS.gene017193.t1 MTR_1g041245 25.160 469 250 17 18 478 10 385 2.88e-23 101
MS.gene017193.t1 MTR_2g008320 25.050 499 241 21 2 476 35 424 3.01e-23 102
MS.gene017193.t1 MTR_7g098510 24.843 479 237 19 18 478 17 390 2.93e-22 99.0
MS.gene017193.t1 MTR_2g008310 24.580 476 234 18 18 476 1 368 4.67e-22 98.2
MS.gene017193.t1 MTR_4g039440 24.899 494 251 18 4 478 19 411 4.70e-22 98.6
MS.gene017193.t1 MTR_3g108560 25.212 472 244 18 16 478 17 388 4.82e-22 98.2
MS.gene017193.t1 MTR_3g107120 25.105 474 249 16 17 476 7 388 1.00e-21 97.4
MS.gene017193.t1 MTR_4g056040 27.071 495 259 20 15 457 5 449 1.65e-21 97.8
MS.gene017193.t1 MTR_0543s0010 25.957 470 232 16 19 478 86 449 1.78e-21 97.1
MS.gene017193.t1 MTR_3g107160 25.207 484 239 17 11 476 2 380 2.42e-21 96.3
MS.gene017193.t1 MTR_2g036470 24.740 481 266 17 7 478 2 395 2.90e-21 95.9
MS.gene017193.t1 MTR_2g086020 39.597 149 83 3 333 478 170 314 2.93e-21 94.7
MS.gene017193.t1 MTR_2g086020 39.344 122 57 4 47 162 3 113 4.82e-13 70.5
MS.gene017193.t1 MTR_3g071850 25.758 462 252 18 18 471 23 401 3.37e-21 97.4
MS.gene017193.t1 MTR_5g039950 27.009 448 240 18 16 453 20 390 4.26e-21 95.9
MS.gene017193.t1 MTR_3g108150 26.050 476 234 16 19 478 13 386 4.36e-21 95.5
MS.gene017193.t1 MTR_7g032380 25.107 466 224 17 18 478 10 355 4.51e-21 94.7
MS.gene017193.t1 MTR_6g040270 26.392 485 226 20 14 476 3 378 8.35e-21 94.4
MS.gene017193.t1 MTR_1g108820 26.834 477 231 22 18 476 7 383 1.01e-20 94.4
MS.gene017193.t1 MTR_2g007400 25.458 491 233 20 18 476 11 400 3.23e-20 92.8
MS.gene017193.t1 MTR_1g085120 25.532 470 249 16 19 478 92 470 3.37e-20 93.6
MS.gene017193.t1 MTR_4g098590 26.712 438 226 15 23 450 3 355 3.66e-20 92.4
MS.gene017193.t1 MTR_6g011460 24.696 494 245 19 6 478 33 420 5.42e-20 92.4
MS.gene017193.t1 MTR_1g085120 25.793 473 244 18 19 478 167 545 5.55e-20 93.2
MS.gene017193.t1 MTR_8g014220 31.602 231 82 8 2 231 5 160 8.20e-20 86.7
MS.gene017193.t1 MTR_4g056070 27.101 476 247 21 15 434 5 436 8.60e-20 92.0
MS.gene017193.t1 MTR_6g045333 23.467 473 263 17 18 478 60 445 1.41e-19 91.3
MS.gene017193.t1 MTR_4g056020 27.455 448 255 19 15 441 5 403 3.43e-19 90.5
MS.gene017193.t1 MTR_1g066830 26.151 478 238 21 18 478 7 386 4.53e-19 89.4
MS.gene017193.t1 MTR_5g007410 24.733 469 249 19 21 476 28 405 7.46e-19 89.4
MS.gene017193.t1 MTR_7g055943 25.364 481 246 20 15 478 36 420 1.04e-18 88.6
MS.gene017193.t1 MTR_3g087260 25.838 507 267 15 19 478 12 456 1.27e-18 88.6
MS.gene017193.t1 MTR_0009s0080 25.546 458 242 14 21 469 20 387 1.33e-18 88.2
MS.gene017193.t1 MTR_5g058000 26.160 474 231 17 18 478 7 374 1.44e-18 87.8
MS.gene017193.t1 MTR_4g056030 27.489 462 259 19 12 449 2 411 2.48e-18 87.8
MS.gene017193.t1 MTR_5g008920 23.859 482 250 19 10 478 3 380 6.89e-18 85.9
MS.gene017193.t1 MTR_1g038710 27.033 455 266 16 17 449 17 427 1.06e-17 85.9
MS.gene017193.t1 MTR_4g055990 24.291 494 286 16 15 457 5 461 2.98e-17 84.7
MS.gene017193.t1 MTR_4g055990 24.089 494 287 17 15 457 5 461 2.99e-17 84.7
MS.gene017193.t1 MTR_5g073370 24.661 442 229 16 16 449 2 347 7.61e-17 82.4
MS.gene017193.t1 MTR_1g107385 25.572 481 243 18 19 476 32 420 1.27e-16 82.4
MS.gene017193.t1 MTR_3g048290 26.008 496 285 17 15 478 19 464 1.98e-16 82.0
MS.gene017193.t1 MTR_5g058100 28.986 276 150 12 231 478 126 383 2.39e-16 81.3
MS.gene017193.t1 MTR_4g113810 35.567 194 93 9 104 292 2 168 8.57e-16 75.5
MS.gene017193.t1 MTR_3g109982 25.620 484 257 17 19 451 13 444 1.35e-15 80.1
MS.gene017193.t1 MTR_8g085430 27.562 283 149 10 18 294 10 242 1.38e-15 78.2
MS.gene017193.t1 MTR_7g034115 26.411 443 218 17 18 451 10 353 5.43e-15 77.0
MS.gene017193.t1 MTR_7g115270 25.159 473 254 21 19 476 12 399 1.25e-14 75.9
MS.gene017193.t1 MTR_2g072720 25.828 453 269 18 14 447 36 440 3.72e-14 75.1
MS.gene017193.t1 MTR_7g056433 31.064 235 122 10 9 240 2 199 4.92e-14 73.9
MS.gene017193.t1 MTR_7g033990 30.870 230 108 10 18 238 10 197 5.98e-14 73.9
MS.gene017193.t1 MTR_1g108820 29.278 263 125 11 18 262 7 226 8.14e-14 73.2
MS.gene017193.t1 MTR_6g018660 26.667 360 206 16 1 341 1 321 1.59e-13 72.4
MS.gene017193.t1 MTR_4g080787 26.263 297 187 10 201 478 180 463 2.53e-13 72.4
MS.gene017193.t1 MTR_7g056447 30.275 218 108 9 19 233 9 185 4.81e-13 70.1
MS.gene017193.t1 MTR_2g005990 28.139 231 124 7 18 238 5 203 5.14e-13 70.9
MS.gene017193.t1 MTR_2g007500 29.333 225 106 6 18 238 13 188 5.17e-13 70.5
MS.gene017193.t1 MTR_7g039630 32.487 197 118 5 201 382 140 336 5.57e-13 70.5
MS.gene017193.t1 MTR_1g108800 24.894 470 205 16 18 476 7 339 7.63e-13 70.1
MS.gene017193.t1 MTR_4g055580 27.088 491 254 24 15 449 96 538 2.23e-12 69.7
MS.gene017193.t1 MTR_3g040700 22.664 428 222 14 19 441 43 366 2.67e-12 68.9
MS.gene017193.t1 MTR_4g024770 45.588 68 34 2 3 68 6 72 5.53e-12 61.6
MS.gene017193.t1 MTR_8g014230 44.444 81 42 2 389 467 14 93 1.08e-11 62.0
MS.gene017193.t1 MTR_6g044560 30.043 233 129 9 18 237 177 388 1.39e-11 67.0
MS.gene017193.t1 MTR_4g080590 26.621 293 193 11 201 479 168 452 1.57e-11 66.6
MS.gene017193.t1 MTR_4g045900 22.385 478 303 17 18 449 25 480 1.58e-11 66.6
MS.gene017193.t1 MTR_7g083740 32.394 142 81 3 344 478 233 366 2.62e-11 65.5
MS.gene017193.t1 MTR_7g034120 34.351 131 76 6 351 478 184 307 2.62e-11 65.1
MS.gene017193.t1 MTR_5g087940 27.055 292 170 11 14 305 21 269 3.52e-11 65.5
MS.gene017193.t1 MTR_6g044572 30.043 233 129 9 18 237 1 212 3.53e-11 65.5
MS.gene017193.t1 MTR_7g056280 32.278 158 92 4 330 476 417 570 4.89e-11 65.5
MS.gene017193.t1 MTR_5g008950 26.255 259 160 10 239 478 118 364 5.74e-11 64.7
MS.gene017193.t1 MTR_2g082880 23.555 467 278 15 11 457 2 409 6.14e-11 64.7
MS.gene017193.t1 MTR_2g007090 26.582 237 127 8 266 479 82 294 6.99e-11 63.5
MS.gene017193.t1 MTR_1377s0010 34.862 109 63 3 343 449 25 127 8.41e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017193.t1 AT1G16930 27.869 488 266 20 19 476 15 446 3.67e-31 125
MS.gene017193.t1 AT1G16930 27.869 488 266 20 19 476 15 446 3.67e-31 125
MS.gene017193.t1 AT1G16930 27.869 488 266 20 19 476 15 446 3.67e-31 125
MS.gene017193.t1 AT5G53840 26.186 485 294 19 8 479 7 440 3.20e-30 122
MS.gene017193.t1 AT4G26340 27.883 477 269 20 18 478 1 418 3.82e-30 122
MS.gene017193.t1 AT5G53635 26.105 475 283 14 21 478 2 425 6.02e-30 121
MS.gene017193.t1 AT5G56420 25.420 476 279 17 19 478 6 421 1.22e-28 117
MS.gene017193.t1 AT5G56420 25.420 476 279 17 19 478 6 421 1.22e-28 117
MS.gene017193.t1 AT5G56420 25.420 476 279 17 19 478 6 421 1.22e-28 117
MS.gene017193.t1 AT5G56440 27.593 482 264 19 18 474 1 422 1.70e-28 117
MS.gene017193.t1 AT4G00160 29.079 478 269 23 19 478 16 441 3.72e-28 117
MS.gene017193.t1 AT5G60610 27.865 445 249 17 18 449 1 386 1.73e-27 114
MS.gene017193.t1 AT5G60610 27.865 445 249 17 18 449 1 386 1.73e-27 114
MS.gene017193.t1 AT4G13965 30.361 471 259 20 17 476 8 420 8.38e-27 112
MS.gene017193.t1 AT4G00315 25.833 480 299 16 18 479 1 441 1.27e-26 112
MS.gene017193.t1 AT1G51370 26.383 470 278 17 19 476 19 432 1.38e-26 112
MS.gene017193.t1 AT5G44950 27.347 490 266 22 19 476 4 435 1.42e-26 112
MS.gene017193.t1 AT1G66310 25.866 491 297 16 1 476 1 439 1.81e-26 112
MS.gene017193.t1 AT2G04230 27.601 471 273 17 13 469 7 423 1.95e-26 112
MS.gene017193.t1 AT1G13780 25.918 490 284 16 19 476 10 452 1.95e-26 112
MS.gene017193.t1 AT1G78750 26.955 486 283 17 17 476 16 455 2.62e-26 111
MS.gene017193.t1 AT1G78750 26.955 486 283 17 17 476 16 455 2.62e-26 111
MS.gene017193.t1 AT4G13985 25.200 500 306 21 1 476 1 456 3.42e-26 111
MS.gene017193.t1 AT5G22700 25.806 465 265 15 19 457 6 416 1.05e-25 109
MS.gene017193.t1 AT5G22700 25.806 465 265 15 19 457 6 416 1.05e-25 109
MS.gene017193.t1 AT5G22700 25.806 465 265 15 19 457 6 416 1.05e-25 109
MS.gene017193.t1 AT5G22700 25.806 465 265 15 19 457 6 416 1.05e-25 109
MS.gene017193.t1 AT5G22610 25.657 495 284 18 19 477 18 464 1.29e-25 110
MS.gene017193.t1 AT5G22700 25.806 465 265 15 19 457 43 453 1.76e-25 109
MS.gene017193.t1 AT5G22730 26.719 509 285 23 1 476 10 463 1.79e-25 109
MS.gene017193.t1 AT5G22730 26.719 509 285 23 1 476 10 463 1.79e-25 109
MS.gene017193.t1 AT5G56560 26.471 476 269 16 20 478 6 417 1.94e-25 108
MS.gene017193.t1 AT2G26030 26.531 490 273 22 19 476 4 438 2.79e-25 108
MS.gene017193.t1 AT2G26030 26.531 490 273 22 19 476 4 438 2.79e-25 108
MS.gene017193.t1 AT5G56820 28.903 474 256 20 19 476 15 423 3.99e-25 107
MS.gene017193.t1 AT2G26030 25.971 489 282 20 19 476 4 443 5.62e-25 107
MS.gene017193.t1 AT5G22670 24.845 483 284 13 19 476 11 439 8.60e-25 107
MS.gene017193.t1 AT1G55660 25.208 480 302 15 18 479 52 492 1.11e-24 107
MS.gene017193.t1 AT1G69630 25.866 491 277 19 16 476 15 448 1.29e-24 106
MS.gene017193.t1 AT5G22660 25.000 492 274 17 19 476 13 443 1.30e-24 106
MS.gene017193.t1 AT3G49030 28.423 482 263 23 19 479 21 441 2.59e-24 105
MS.gene017193.t1 AT5G44980 27.273 484 278 21 17 478 2 433 3.04e-24 105
MS.gene017193.t1 AT5G44980 27.273 484 278 21 17 478 2 433 3.04e-24 105
MS.gene017193.t1 AT5G22610 25.519 482 271 18 19 477 18 434 3.89e-24 105
MS.gene017193.t1 AT5G38570 25.957 470 244 17 18 478 1 375 1.28e-23 102
MS.gene017193.t1 AT1G66300 26.033 484 277 21 17 476 27 453 1.65e-23 103
MS.gene017193.t1 AT5G27750 25.610 492 290 17 19 476 5 454 3.90e-23 102
MS.gene017193.t1 AT5G56380 26.061 495 277 22 18 479 1 439 4.79e-23 101
MS.gene017193.t1 AT5G56380 26.061 495 277 22 18 479 1 439 4.79e-23 101
MS.gene017193.t1 AT1G22000 25.767 489 262 18 20 476 30 449 1.03e-22 100
MS.gene017193.t1 AT5G56400 26.834 477 281 15 17 478 31 454 1.03e-22 100
MS.gene017193.t1 AT1G32375 24.947 473 291 15 18 478 1 421 2.83e-22 99.4
MS.gene017193.t1 AT1G32375 24.947 473 291 15 18 478 1 421 2.83e-22 99.4
MS.gene017193.t1 AT5G44960 24.319 477 284 17 16 478 2 415 4.79e-22 98.6
MS.gene017193.t1 AT2G26860 25.607 453 267 18 18 453 1 400 5.36e-22 98.2
MS.gene017193.t1 AT2G26860 25.607 453 267 18 18 453 1 400 5.36e-22 98.2
MS.gene017193.t1 AT3G52680 28.306 484 265 20 19 479 21 445 6.35e-22 98.6
MS.gene017193.t1 AT1G78760 23.742 497 301 19 1 476 1 440 6.65e-22 98.6
MS.gene017193.t1 AT1G80470 25.000 492 291 21 5 476 1 434 7.42e-22 98.6
MS.gene017193.t1 AT5G22720 25.755 497 277 21 19 478 23 464 1.08e-21 98.2
MS.gene017193.t1 AT1G51370 25.000 468 265 16 19 476 19 410 4.57e-21 95.5
MS.gene017193.t1 AT3G58980 27.530 494 274 21 18 479 1 442 8.11e-21 95.9
MS.gene017193.t1 AT5G22700 24.229 454 245 14 19 457 43 412 1.27e-20 94.4
MS.gene017193.t1 AT3G44810 30.347 346 201 10 21 357 9 323 1.84e-20 94.4
MS.gene017193.t1 AT3G58900 25.536 466 270 17 18 449 1 423 1.91e-20 94.4
MS.gene017193.t1 AT3G59200 28.499 393 216 14 19 383 7 362 2.82e-20 92.8
MS.gene017193.t1 AT5G56810 27.879 495 273 21 7 478 2 435 3.65e-20 93.2
MS.gene017193.t1 AT5G56370 25.207 484 275 17 18 478 1 420 4.85e-20 92.8
MS.gene017193.t1 AT5G56370 25.207 484 275 17 18 478 1 420 4.85e-20 92.8
MS.gene017193.t1 AT3G59200 28.499 393 216 14 19 383 7 362 1.03e-19 92.4
MS.gene017193.t1 AT1G78730 24.510 510 258 21 1 476 1 417 1.19e-19 91.7
MS.gene017193.t1 AT5G38590 24.831 443 276 15 18 456 1 390 1.52e-19 90.9
MS.gene017193.t1 AT4G10420 28.622 283 181 10 201 478 55 321 6.51e-19 88.2
MS.gene017193.t1 AT1G66290 24.949 493 287 23 7 476 18 450 9.82e-19 89.0
MS.gene017193.t1 AT3G49020 26.415 477 282 18 19 479 22 445 1.34e-18 88.6
MS.gene017193.t1 AT3G26920 30.241 291 173 12 201 478 66 339 1.53e-18 87.0
MS.gene017193.t1 AT3G26920 30.241 291 173 12 201 478 66 339 1.53e-18 87.0
MS.gene017193.t1 AT5G56700 25.258 388 238 12 73 451 8 352 2.63e-18 86.7
MS.gene017193.t1 AT1G05080 24.948 477 292 17 19 479 13 439 2.76e-18 87.4
MS.gene017193.t1 AT5G18780 24.895 478 289 17 19 476 11 438 3.90e-18 87.0
MS.gene017193.t1 AT5G18780 24.895 478 289 17 19 476 11 438 3.90e-18 87.0
MS.gene017193.t1 AT3G42770 24.947 473 289 15 21 477 1 423 5.24e-18 87.0
MS.gene017193.t1 AT3G58860 25.106 470 293 17 14 466 2 429 6.62e-18 86.7
MS.gene017193.t1 AT3G59240 26.946 501 280 26 16 477 2 455 9.51e-18 86.3
MS.gene017193.t1 AT5G62970 25.251 499 286 21 18 479 1 449 1.35e-17 85.5
MS.gene017193.t1 AT3G51530 26.096 456 267 17 4 445 12 411 2.28e-17 84.7
MS.gene017193.t1 AT1G16940 24.520 469 272 18 21 476 13 412 2.72e-17 84.3
MS.gene017193.t1 AT3G60040 25.907 386 229 12 19 383 13 362 3.11e-17 85.1
MS.gene017193.t1 AT1G66320 23.742 497 292 17 7 476 18 454 3.65e-17 84.3
MS.gene017193.t1 AT3G60040 25.907 386 229 12 19 383 230 579 3.83e-17 84.7
MS.gene017193.t1 AT3G60040 25.907 386 229 12 19 383 232 581 4.55e-17 84.7
MS.gene017193.t1 AT3G60040 25.907 386 229 12 19 383 232 581 5.23e-17 84.7
MS.gene017193.t1 AT3G60040 25.907 386 229 12 19 383 233 582 5.28e-17 84.7
MS.gene017193.t1 AT5G41840 25.935 401 230 14 19 383 14 383 6.66e-17 83.6
MS.gene017193.t1 AT4G15060 25.721 451 252 20 4 434 11 398 8.61e-17 82.8
MS.gene017193.t1 AT5G56410 25.546 458 267 20 18 449 1 410 9.07e-17 83.2
MS.gene017193.t1 AT5G56390 24.894 470 298 15 18 478 1 424 9.11e-17 82.8
MS.gene017193.t1 AT5G18770 25.726 482 286 20 19 475 24 458 1.12e-16 82.8
MS.gene017193.t1 AT5G25850 25.781 512 270 19 18 475 19 474 1.55e-16 82.4
MS.gene017193.t1 AT3G58920 25.098 510 292 21 18 479 1 468 1.66e-16 82.4
MS.gene017193.t1 AT1G55030 27.101 476 268 22 19 478 19 431 3.04e-16 81.3
MS.gene017193.t1 AT1G55030 27.101 476 268 21 19 478 9 421 3.40e-16 80.9
MS.gene017193.t1 AT5G56560 29.010 293 167 10 203 478 338 606 6.94e-16 80.9
MS.gene017193.t1 AT3G58900 27.632 304 167 11 18 308 1 264 1.61e-15 78.2
MS.gene017193.t1 AT3G58900 27.632 304 167 11 18 308 1 264 1.61e-15 78.2
MS.gene017193.t1 AT3G58900 27.632 304 167 11 18 308 1 264 2.05e-15 77.4
MS.gene017193.t1 AT4G14103 30.508 295 159 14 19 305 8 264 3.15e-15 77.8
MS.gene017193.t1 AT4G14103 30.508 295 159 14 19 305 8 264 3.15e-15 77.8
MS.gene017193.t1 AT1G55660 27.407 270 158 9 18 283 52 287 3.34e-15 77.4
MS.gene017193.t1 AT4G14103 30.508 295 159 14 19 305 8 264 4.67e-15 77.8
MS.gene017193.t1 AT3G26922 28.527 319 177 12 19 332 14 286 5.94e-15 75.9
MS.gene017193.t1 AT3G26922 28.527 319 177 12 19 332 14 286 5.94e-15 75.9
MS.gene017193.t1 AT3G26930 27.423 485 266 21 19 479 21 443 8.12e-15 77.0
MS.gene017193.t1 AT3G58930 23.353 501 312 16 18 478 1 469 8.68e-15 77.0
MS.gene017193.t1 AT3G58930 23.353 501 312 16 18 478 1 469 8.68e-15 77.0
MS.gene017193.t1 AT3G58930 23.353 501 312 16 18 478 1 469 8.68e-15 77.0
MS.gene017193.t1 AT5G22730 26.570 414 224 20 1 383 10 374 8.78e-15 76.3
MS.gene017193.t1 AT3G56780 23.619 525 269 20 21 476 9 470 1.37e-14 76.3
MS.gene017193.t1 AT3G49480 23.769 467 276 17 19 459 12 424 1.74e-14 75.9
MS.gene017193.t1 AT5G38590 24.922 321 191 12 18 334 1 275 4.02e-14 73.2
MS.gene017193.t1 AT5G22660 25.145 346 183 10 19 338 13 308 5.37e-14 73.2
MS.gene017193.t1 AT5G41830 26.582 395 232 14 15 383 9 371 6.05e-14 74.3
MS.gene017193.t1 AT4G14096 26.382 398 210 17 19 405 8 333 1.20e-13 73.2
MS.gene017193.t1 AT4G14096 26.382 398 210 17 19 405 8 333 1.20e-13 73.2
MS.gene017193.t1 AT5G56325 25.940 266 174 9 223 478 11 263 1.31e-13 71.2
MS.gene017193.t1 AT2G42730 24.375 480 307 18 19 477 5 449 1.51e-13 73.2
MS.gene017193.t1 AT3G26920 28.269 283 150 12 201 478 66 300 4.07e-13 70.5
MS.gene017193.t1 AT5G56810 28.472 288 150 11 7 281 2 246 4.25e-13 70.5
MS.gene017193.t1 AT4G22280 24.790 476 279 21 18 478 1 412 4.50e-13 71.2
MS.gene017193.t1 AT2G26030 27.899 276 165 13 225 476 18 283 6.47e-13 69.7
MS.gene017193.t1 AT4G00320 27.068 399 225 18 15 383 9 371 7.04e-13 71.2
MS.gene017193.t1 AT5G44850 23.358 411 219 17 73 476 7 328 7.56e-13 70.1
MS.gene017193.t1 AT5G38390 25.214 468 256 17 18 449 1 410 1.09e-12 70.5
MS.gene017193.t1 AT5G44980 26.807 332 184 15 17 330 2 292 1.09e-12 69.3
MS.gene017193.t1 AT5G44980 26.807 332 184 15 17 330 2 292 1.09e-12 69.3
MS.gene017193.t1 AT3G54910 24.938 401 248 14 84 478 19 372 1.21e-12 69.7
MS.gene017193.t1 AT3G54910 24.938 401 248 14 84 478 19 372 1.21e-12 69.7
MS.gene017193.t1 AT3G54910 24.938 401 248 14 84 478 19 372 1.21e-12 69.7
MS.gene017193.t1 AT5G18770 26.247 381 220 15 19 380 24 362 1.90e-12 69.3
MS.gene017193.t1 AT4G13960 26.166 386 228 14 18 383 1 349 2.69e-12 69.3
MS.gene017193.t1 AT4G13960 26.166 386 228 14 18 383 1 349 2.69e-12 69.3
MS.gene017193.t1 AT5G35995 23.984 492 300 20 19 478 5 454 2.86e-12 68.9
MS.gene017193.t1 AT5G35995 23.984 492 300 20 19 478 5 454 2.86e-12 68.9
MS.gene017193.t1 AT5G18780 25.126 398 233 15 19 400 11 359 3.57e-12 68.2
MS.gene017193.t1 AT5G18780 25.126 398 233 15 19 400 11 359 3.57e-12 68.2
MS.gene017193.t1 AT3G59190 24.594 431 258 17 14 427 7 387 7.74e-12 67.4
MS.gene017193.t1 AT3G59190 26.974 304 183 10 14 310 7 278 1.03e-11 67.4
MS.gene017193.t1 AT1G56610 28.346 254 142 6 24 275 15 230 1.37e-11 67.0
MS.gene017193.t1 AT5G22600 25.414 362 196 13 148 477 1 320 1.53e-11 65.9
MS.gene017193.t1 AT5G22600 25.414 362 196 13 148 477 1 320 1.53e-11 65.9
MS.gene017193.t1 AT4G27050 22.421 504 296 20 17 478 2 452 1.72e-11 66.6
MS.gene017193.t1 AT4G27050 22.421 504 296 20 17 478 2 452 1.72e-11 66.6
MS.gene017193.t1 AT4G27050 22.421 504 296 20 17 478 2 452 1.72e-11 66.6
MS.gene017193.t1 AT4G27050 22.421 504 296 20 17 478 2 452 1.72e-11 66.6
MS.gene017193.t1 AT4G27050 22.421 504 296 20 17 478 2 452 1.72e-11 66.6
MS.gene017193.t1 AT3G26930 25.821 457 254 20 47 479 3 398 1.94e-11 66.2
MS.gene017193.t1 AT3G52690 28.041 296 179 13 199 478 20 297 2.03e-11 65.5
MS.gene017193.t1 AT1G56610 29.134 254 140 7 24 275 78 293 2.61e-11 66.2
MS.gene017193.t1 AT5G53640 26.786 224 112 7 19 237 22 198 3.07e-11 63.5
MS.gene017193.t1 AT5G56700 27.511 229 130 8 87 310 22 219 4.98e-11 63.9
MS.gene017193.t1 AT5G41630 26.786 224 127 7 19 235 12 205 9.70e-11 64.3

Find 104 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTACTAGACATGTATAATT+TGG 0.197938 5.3:+74466945 MS.gene017193:CDS
GGTTCAACAGATTCACTTTC+AGG 0.208119 5.3:-74467240 None:intergenic
CTCGCAAATGGCGCAATATT+TGG 0.238835 5.3:+74466109 MS.gene017193:CDS
TTACCGCCGCCGGCTTCAAC+AGG 0.285165 5.3:+74466382 MS.gene017193:CDS
CGAAGTGTGGCCAAAGATTC+AGG 0.291932 5.3:-74467036 None:intergenic
TAAAGCAAGTGGCGAAATTC+AGG 0.293563 5.3:-74467459 None:intergenic
TGAATCTTTGGCCACACTTC+GGG 0.320102 5.3:+74467038 MS.gene017193:CDS
AAATGGGATACAAGACATTT+AGG 0.331229 5.3:-74467712 None:intergenic
CTGTCCTGTTCTCGAAAATC+TGG 0.345977 5.3:+74466999 MS.gene017193:CDS
ATTCATCACCTTCATATGAA+TGG 0.356856 5.3:+74467668 MS.gene017193:CDS
TGTGGTACGAATGCAGGTTT+TGG 0.357467 5.3:-74466076 None:intergenic
GTCAATCGAGTGGTTATAGA+AGG 0.357684 5.3:-74466304 None:intergenic
GATGAAACTCCTCGAGGTTT+GGG 0.377236 5.3:-74466350 None:intergenic
AGATGAAACTCCTCGAGGTT+TGG 0.379740 5.3:-74466351 None:intergenic
GAAGGTCAATAAAGGTCAAA+TGG 0.381046 5.3:-74467729 None:intergenic
GTTATCGAATTCATAAATTA+CGG 0.385345 5.3:-74466172 None:intergenic
GGAGAGGATGTGATGTAGTA+AGG 0.386148 5.3:-74466043 None:intergenic
GGGCAAGAGAAGAGGGAAAC+AGG 0.388572 5.3:-74466408 None:intergenic
ATGTGATGTAGTAAGGAGTT+TGG 0.398364 5.3:-74466036 None:intergenic
TCCGCAAATCTCGCATTGTT+CGG 0.399549 5.3:+74466244 MS.gene017193:CDS
GACTCTGCCGCCTCCGCCAT+CGG 0.401729 5.3:-74465973 None:intergenic
TCCGAACAATGCGAGATTTG+CGG 0.403727 5.3:-74466245 None:intergenic
ATCGTCAAATTCTCTATCAT+AGG 0.406822 5.3:+74466484 MS.gene017193:CDS
AGCATCACGAAACGTGATAT+TGG 0.407324 5.3:-74467160 None:intergenic
CTCCTCGAGGTTTGGGCCAA+TGG 0.421806 5.3:-74466343 None:intergenic
AGTCTTCTCCGAGCTCTCTC+TGG 0.426037 5.3:+74467270 MS.gene017193:CDS
CACCCCTCGTTTCTCGCAAA+TGG 0.426304 5.3:+74466097 MS.gene017193:CDS
TTTCGTGATGCTGCTTCTGT+TGG 0.427729 5.3:+74467171 MS.gene017193:CDS
ACTTGCTTTATATAGAGCTT+TGG 0.428633 5.3:+74467472 MS.gene017193:CDS
TTGGAAGAATCTCGAAGCCT+TGG 0.433104 5.3:+74466128 MS.gene017193:CDS
TGACACGTGGCAGATGCCTT+TGG 0.439487 5.3:-74467889 None:intergenic
AATTTCCGAGATATTCTTGA+AGG 0.442176 5.3:-74467747 None:intergenic
TTCATCACCTTCATATGAAT+GGG 0.445404 5.3:+74467669 MS.gene017193:CDS
TTATCGAATTCATAAATTAC+GGG 0.447046 5.3:-74466171 None:intergenic
GGATACTCCGATGGCGGAGG+CGG 0.450270 5.3:+74465966 MS.gene017193:CDS
TGCCTGAGAGAGACAAGGTT+AGG 0.451617 5.3:-74466429 None:intergenic
TCTGCAATTGCAAGACGATT+CGG 0.452828 5.3:+74466891 MS.gene017193:CDS
TTCACTTCCCATTCATATGA+AGG 0.453446 5.3:-74467676 None:intergenic
GTAGTAAGGAGTTTGGTAGT+TGG 0.454541 5.3:-74466029 None:intergenic
ATATTCTTGAAGGTCAATAA+AGG 0.454998 5.3:-74467737 None:intergenic
GCCCTAACCTTGTCTCTCTC+AGG 0.455076 5.3:+74466427 MS.gene017193:CDS
CTGAATCTTTGGCCACACTT+CGG 0.455360 5.3:+74467037 MS.gene017193:CDS
GATCAGGCGCGTCTATTTCA+AGG 0.461395 5.3:-74467119 None:intergenic
ATCAATGTTGAGAATGAGGT+TGG 0.461553 5.3:+74467090 MS.gene017193:CDS
TCTCGGAAATTTAAATGAGC+TGG 0.464659 5.3:+74467759 MS.gene017193:CDS
TTCGTGATGCTGCTTCTGTT+GGG 0.465190 5.3:+74467172 MS.gene017193:CDS
GTTTAATTCCAGAGAGAGCT+CGG 0.466178 5.3:-74467278 None:intergenic
TCAATGTTGAGAATGAGGTT+GGG 0.476409 5.3:+74467091 MS.gene017193:CDS
ATTGACCTTCAAGAATATCT+CGG 0.477906 5.3:+74467742 MS.gene017193:CDS
GGCAGATGCCTTTGGTAGAT+CGG 0.483284 5.3:-74467881 None:intergenic
TCTGTGAATGTCCTTCTCTC+TGG 0.486132 5.3:+74466976 MS.gene017193:CDS
AAGGTCAATAAAGGTCAAAT+GGG 0.501175 5.3:-74467728 None:intergenic
CACCCTGTTGAAGCCGGCGG+CGG 0.502744 5.3:-74466385 None:intergenic
CAATGTTGAGAATGAGGTTG+GGG 0.505466 5.3:+74467092 MS.gene017193:CDS
AACAGGCACCCTGTTGAAGC+CGG 0.507985 5.3:-74466391 None:intergenic
GTTATGAGAGTTTGTAGCAC+AGG 0.517195 5.3:-74467543 None:intergenic
ACGTGATATTGGTGAGACTA+AGG 0.517984 5.3:-74467149 None:intergenic
AGACTAAGGTACTTGAGATC+AGG 0.518799 5.3:-74467135 None:intergenic
TCGTCAAATTCTCTATCATA+GGG 0.520873 5.3:+74466485 MS.gene017193:CDS
ACGTGGATCAATGCCGCCAT+TGG 0.525825 5.3:+74466327 MS.gene017193:CDS
AATTCAGGAAAATCTAAGAC+AGG 0.526097 5.3:-74467444 None:intergenic
GCTCGGAGAAGACTGAGTAC+AGG 0.526432 5.3:-74467261 None:intergenic
GAATTCATAAATTACGGGGC+TGG 0.526816 5.3:-74466166 None:intergenic
GAGGGGTGTGGTACGAATGC+AGG 0.527172 5.3:-74466082 None:intergenic
TCTGTCAATGTCGTCATCGT+CGG 0.528078 5.3:-74466001 None:intergenic
CTCACTCTGCTTACCGCCGC+CGG 0.531519 5.3:+74466372 MS.gene017193:CDS
AACAGATTCACTTTCAGGAG+TGG 0.531982 5.3:-74467235 None:intergenic
GTCAATGTCGTCATCGTCGG+AGG 0.548656 5.3:-74465998 None:intergenic
GCCTGAGAGAGACAAGGTTA+GGG 0.552761 5.3:-74466428 None:intergenic
GCGCCATTTGCGAGAAACGA+GGG 0.554555 5.3:-74466100 None:intergenic
GAACAGGACAGCCAGAGAGA+AGG 0.554699 5.3:-74466987 None:intergenic
AAGGTTAGGGCAAGAGAAGA+GGG 0.555833 5.3:-74466415 None:intergenic
GAGGACAGTGTTGACGAAAA+CGG 0.556678 5.3:-74466217 None:intergenic
CAAGGTTAGGGCAAGAGAAG+AGG 0.557826 5.3:-74466416 None:intergenic
TACCGCCGCCGGCTTCAACA+GGG 0.559701 5.3:+74466383 MS.gene017193:CDS
CTCGAGGTTTGGGCCAATGG+CGG 0.559983 5.3:-74466340 None:intergenic
GAAGGTGATGAATCAAATGA+TGG 0.561486 5.3:-74467658 None:intergenic
TGCGAGATTTGCGGAGAGTG+AGG 0.565813 5.3:-74466236 None:intergenic
TCTCATAACATTCAACTACA+AGG 0.568167 5.3:+74467557 MS.gene017193:CDS
GCTGCTTAGTTTAACTACAA+AGG 0.572115 5.3:+74467308 MS.gene017193:CDS
GATGGATACTCCGATGGCGG+AGG 0.578378 5.3:+74465963 None:intergenic
TTTGCGAGAAACGAGGGGTG+TGG 0.589736 5.3:-74466094 None:intergenic
GGAACTGTCGCAGAAATCCA+AGG 0.603410 5.3:-74466145 None:intergenic
AAAGCTCTATATAAAGCAAG+TGG 0.607124 5.3:-74467470 None:intergenic
TGAAGATGACACCCGAAGTG+TGG 0.610539 5.3:-74467049 None:intergenic
TTCAGGAAAATCTAAGACAG+GGG 0.611075 5.3:-74467442 None:intergenic
TGTCATCTTCAACCTTGAAG+AGG 0.618499 5.3:+74467061 MS.gene017193:CDS
TGTTGGGAACTTGCACAATG+TGG 0.624137 5.3:+74467188 MS.gene017193:CDS
GGAGGCGATGGATACTCCGA+TGG 0.633912 5.3:+74465957 None:intergenic
TGCGCCATTTGCGAGAAACG+AGG 0.635364 5.3:-74466101 None:intergenic
CGCCATTTGCGAGAAACGAG+GGG 0.635930 5.3:-74466099 None:intergenic
CGCCATTGGCCCAAACCTCG+AGG 0.640548 5.3:+74466341 MS.gene017193:CDS
TCAATCGAGTGGTTATAGAA+GGG 0.641238 5.3:-74466303 None:intergenic
ATTCAGGAAAATCTAAGACA+GGG 0.645585 5.3:-74467443 None:intergenic
GAACGTGATAGCATGAGAGA+CGG 0.645881 5.3:-74466272 None:intergenic
GGCGATGGATACTCCGATGG+CGG 0.659130 5.3:+74465960 None:intergenic
AGGCACCCTGTTGAAGCCGG+CGG 0.664495 5.3:-74466388 None:intergenic
TGATCCACGTGTCAATCGAG+TGG 0.668936 5.3:-74466314 None:intergenic
AGTTGCAGCAACTTCAGTGA+CGG 0.673174 5.3:-74466925 None:intergenic
TATCGAATTCATAAATTACG+GGG 0.674759 5.3:-74466170 None:intergenic
GTGAAATTTAACTTGACACG+TGG 0.694107 5.3:-74467902 None:intergenic
ATTGTTGCCTGAGAGAGACA+AGG 0.696101 5.3:-74466434 None:intergenic
ATAACCACTCGATTGACACG+TGG 0.713847 5.3:+74466310 MS.gene017193:CDS
GAGTGAGATGAAACTCCTCG+AGG 0.759501 5.3:-74466356 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACGATAAAAAACAAAAAGAA+AGG - chr5.3:74466469-74466488 None:intergenic 20.0%
!! ATTAACAGCTTATTTCAATA+GGG + chr5.3:74466717-74466736 MS.gene017193:intron 20.0%
!! GTTATCGAATTCATAAATTA+CGG - chr5.3:74466175-74466194 None:intergenic 20.0%
!! TTATCGAATTCATAAATTAC+GGG - chr5.3:74466174-74466193 None:intergenic 20.0%
! AAAAATCAATGTTGAGAATG+AGG + chr5.3:74467086-74467105 MS.gene017193:CDS 25.0%
! AAACAAAAAGAAAGGATGAA+AGG - chr5.3:74466461-74466480 None:intergenic 25.0%
! ACTACTAGACATGTATAATT+TGG + chr5.3:74466945-74466964 MS.gene017193:CDS 25.0%
! ATATTCTTGAAGGTCAATAA+AGG - chr5.3:74467740-74467759 None:intergenic 25.0%
! CATTAACAGCTTATTTCAAT+AGG + chr5.3:74466716-74466735 MS.gene017193:intron 25.0%
! TATCGAATTCATAAATTACG+GGG - chr5.3:74466173-74466192 None:intergenic 25.0%
! TTCAAATTATTATCCCTGTT+GGG - chr5.3:74466589-74466608 None:intergenic 25.0%
! TTTCAAATTATTATCCCTGT+TGG - chr5.3:74466590-74466609 None:intergenic 25.0%
!!! ATTGATTTTTAACCTCTTCA+AGG - chr5.3:74467076-74467095 None:intergenic 25.0%
AAAGCTCTATATAAAGCAAG+TGG - chr5.3:74467473-74467492 None:intergenic 30.0%
AAATGGGATACAAGACATTT+AGG - chr5.3:74467715-74467734 None:intergenic 30.0%
AAGGTCAATAAAGGTCAAAT+GGG - chr5.3:74467731-74467750 None:intergenic 30.0%
AATTTCCGAGATATTCTTGA+AGG - chr5.3:74467750-74467769 None:intergenic 30.0%
ACTTGCTTTATATAGAGCTT+TGG + chr5.3:74467472-74467491 MS.gene017193:CDS 30.0%
AGTCTATTCAAACATACAAC+TGG + chr5.3:74466536-74466555 MS.gene017193:intron 30.0%
ATCGTCAAATTCTCTATCAT+AGG + chr5.3:74466484-74466503 MS.gene017193:CDS 30.0%
ATTCATCACCTTCATATGAA+TGG + chr5.3:74467668-74467687 MS.gene017193:CDS 30.0%
ATTGACCTTCAAGAATATCT+CGG + chr5.3:74467742-74467761 MS.gene017193:CDS 30.0%
GTCTATTCAAACATACAACT+GGG + chr5.3:74466537-74466556 MS.gene017193:intron 30.0%
TCAAATTATTATCCCTGTTG+GGG - chr5.3:74466588-74466607 None:intergenic 30.0%
TCGTCAAATTCTCTATCATA+GGG + chr5.3:74466485-74466504 MS.gene017193:CDS 30.0%
TCTCATAACATTCAACTACA+AGG + chr5.3:74467557-74467576 MS.gene017193:CDS 30.0%
TTCATCACCTTCATATGAAT+GGG + chr5.3:74467669-74467688 MS.gene017193:CDS 30.0%
TTCATGACAACTTACTAATC+CGG - chr5.3:74466681-74466700 None:intergenic 30.0%
! AATTCAGGAAAATCTAAGAC+AGG - chr5.3:74467447-74467466 None:intergenic 30.0%
! ACAAGCTATGTTTTGCAAAA+TGG + chr5.3:74467787-74467806 MS.gene017193:CDS 30.0%
! AGACATTTAGGAACACTTTT+CGG - chr5.3:74467703-74467722 None:intergenic 30.0%
! ATTCAGGAAAATCTAAGACA+GGG - chr5.3:74467446-74467465 None:intergenic 30.0%
AAAAATCTCCGATCTACCAA+AGG + chr5.3:74467873-74467892 MS.gene017193:CDS 35.0%
ATCAATGTTGAGAATGAGGT+TGG + chr5.3:74467090-74467109 MS.gene017193:CDS 35.0%
ATGTGATGTAGTAAGGAGTT+TGG - chr5.3:74466039-74466058 None:intergenic 35.0%
GAAGGTCAATAAAGGTCAAA+TGG - chr5.3:74467732-74467751 None:intergenic 35.0%
GAAGGTGATGAATCAAATGA+TGG - chr5.3:74467661-74467680 None:intergenic 35.0%
GCTGCTTAGTTTAACTACAA+AGG + chr5.3:74467308-74467327 MS.gene017193:CDS 35.0%
TCAATCGAGTGGTTATAGAA+GGG - chr5.3:74466306-74466325 None:intergenic 35.0%
TCAATGTTGAGAATGAGGTT+GGG + chr5.3:74467091-74467110 MS.gene017193:CDS 35.0%
TCTCGGAAATTTAAATGAGC+TGG + chr5.3:74467759-74467778 MS.gene017193:CDS 35.0%
TTCACTTCCCATTCATATGA+AGG - chr5.3:74467679-74467698 None:intergenic 35.0%
! AGTTTTTCGCTAGAACAACA+GGG + chr5.3:74467838-74467857 MS.gene017193:CDS 35.0%
! TTCAGGAAAATCTAAGACAG+GGG - chr5.3:74467445-74467464 None:intergenic 35.0%
! TTCTTTTGCTCCTGAATCTT+TGG + chr5.3:74467026-74467045 MS.gene017193:CDS 35.0%
!! AATCAAATGATGGATGCATC+TGG - chr5.3:74467651-74467670 None:intergenic 35.0%
!! ATTTCCAGATTTTCGAGAAC+AGG - chr5.3:74467006-74467025 None:intergenic 35.0%
!! GTGAAATTTAACTTGACACG+TGG - chr5.3:74467905-74467924 None:intergenic 35.0%
!!! GTGTGCGTGTATTTTTTGTT+TGG + chr5.3:74467598-74467617 MS.gene017193:intron 35.0%
AACAGATTCACTTTCAGGAG+TGG - chr5.3:74467238-74467257 None:intergenic 40.0%
ACGTGATATTGGTGAGACTA+AGG - chr5.3:74467152-74467171 None:intergenic 40.0%
AGCATCACGAAACGTGATAT+TGG - chr5.3:74467163-74467182 None:intergenic 40.0%
CAATGTTGAGAATGAGGTTG+GGG + chr5.3:74467092-74467111 MS.gene017193:CDS 40.0%
GAATTCATAAATTACGGGGC+TGG - chr5.3:74466169-74466188 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG - chr5.3:74467243-74467262 None:intergenic 40.0%
GTCAATCGAGTGGTTATAGA+AGG - chr5.3:74466307-74466326 None:intergenic 40.0%
GTTATGAGAGTTTGTAGCAC+AGG - chr5.3:74467546-74467565 None:intergenic 40.0%
GTTTAATTCCAGAGAGAGCT+CGG - chr5.3:74467281-74467300 None:intergenic 40.0%
TAAAGCAAGTGGCGAAATTC+AGG - chr5.3:74467462-74467481 None:intergenic 40.0%
TCTGCAATTGCAAGACGATT+CGG + chr5.3:74466891-74466910 MS.gene017193:CDS 40.0%
TGTCATCTTCAACCTTGAAG+AGG + chr5.3:74467061-74467080 MS.gene017193:CDS 40.0%
TTGTGTCGTGTTTGTGACAT+GGG + chr5.3:74466641-74466660 MS.gene017193:intron 40.0%
! AGACTAAGGTACTTGAGATC+AGG - chr5.3:74467138-74467157 None:intergenic 40.0%
! CAGTTTTTCGCTAGAACAAC+AGG + chr5.3:74467837-74467856 MS.gene017193:CDS 40.0%
! CTTTTGTCTTGTACAAGCAG+TGG + chr5.3:74467409-74467428 MS.gene017193:intron 40.0%
! GTAGTAAGGAGTTTGGTAGT+TGG - chr5.3:74466032-74466051 None:intergenic 40.0%
! GTTTTTCGCTAGAACAACAG+GGG + chr5.3:74467839-74467858 MS.gene017193:CDS 40.0%
! TTTTTCGCTAGAACAACAGG+GGG + chr5.3:74467840-74467859 MS.gene017193:CDS 40.0%
!! TACGAATGCAGGTTTTGGTA+GGG - chr5.3:74466074-74466093 None:intergenic 40.0%
AAGGTTAGGGCAAGAGAAGA+GGG - chr5.3:74466418-74466437 None:intergenic 45.0%
ACAACTGGGTCTATGAAGCA+CGG + chr5.3:74466551-74466570 MS.gene017193:intron 45.0%
AGATGAAACTCCTCGAGGTT+TGG - chr5.3:74466354-74466373 None:intergenic 45.0%
AGTTGCAGCAACTTCAGTGA+CGG - chr5.3:74466928-74466947 None:intergenic 45.0%
ATAACCACTCGATTGACACG+TGG + chr5.3:74466310-74466329 MS.gene017193:CDS 45.0%
ATGGATGCATCTGGCAACAA+TGG - chr5.3:74467642-74467661 None:intergenic 45.0%
ATTGTTGCCTGAGAGAGACA+AGG - chr5.3:74466437-74466456 None:intergenic 45.0%
CTCGCAAATGGCGCAATATT+TGG + chr5.3:74466109-74466128 MS.gene017193:CDS 45.0%
CTGAATCTTTGGCCACACTT+CGG + chr5.3:74467037-74467056 MS.gene017193:CDS 45.0%
CTGTCCTGTTCTCGAAAATC+TGG + chr5.3:74466999-74467018 MS.gene017193:CDS 45.0%
CTTGTGTCGTGTTTGTGACA+TGG + chr5.3:74466640-74466659 MS.gene017193:intron 45.0%
GAACGTGATAGCATGAGAGA+CGG - chr5.3:74466275-74466294 None:intergenic 45.0%
GATGAAACTCCTCGAGGTTT+GGG - chr5.3:74466353-74466372 None:intergenic 45.0%
GGAGAGGATGTGATGTAGTA+AGG - chr5.3:74466046-74466065 None:intergenic 45.0%
TCCGAACAATGCGAGATTTG+CGG - chr5.3:74466248-74466267 None:intergenic 45.0%
TCCGCAAATCTCGCATTGTT+CGG + chr5.3:74466244-74466263 MS.gene017193:CDS 45.0%
TCTGTCAATGTCGTCATCGT+CGG - chr5.3:74466004-74466023 None:intergenic 45.0%
TCTGTGAATGTCCTTCTCTC+TGG + chr5.3:74466976-74466995 MS.gene017193:CDS 45.0%
TGAATCTTTGGCCACACTTC+GGG + chr5.3:74467038-74467057 MS.gene017193:CDS 45.0%
TGTGTCGTGTTTGTGACATG+GGG + chr5.3:74466642-74466661 MS.gene017193:intron 45.0%
TGTTGGGAACTTGCACAATG+TGG + chr5.3:74467188-74467207 MS.gene017193:CDS 45.0%
TTACTAATCCGGACACTCCT+CGG - chr5.3:74466670-74466689 None:intergenic 45.0%
TTGGAAGAATCTCGAAGCCT+TGG + chr5.3:74466128-74466147 MS.gene017193:CDS 45.0%
! TGTGGTACGAATGCAGGTTT+TGG - chr5.3:74466079-74466098 None:intergenic 45.0%
! TTCGTGATGCTGCTTCTGTT+GGG + chr5.3:74467172-74467191 MS.gene017193:CDS 45.0%
! TTTCGTGATGCTGCTTCTGT+TGG + chr5.3:74467171-74467190 MS.gene017193:CDS 45.0%
!! GAGGACAGTGTTGACGAAAA+CGG - chr5.3:74466220-74466239 None:intergenic 45.0%
!! GTACGAATGCAGGTTTTGGT+AGG - chr5.3:74466075-74466094 None:intergenic 45.0%
CAAGGTTAGGGCAAGAGAAG+AGG - chr5.3:74466419-74466438 None:intergenic 50.0%
CGAAGTGTGGCCAAAGATTC+AGG - chr5.3:74467039-74467058 None:intergenic 50.0%
GAGTGAGATGAAACTCCTCG+AGG - chr5.3:74466359-74466378 None:intergenic 50.0%
GATCAGGCGCGTCTATTTCA+AGG - chr5.3:74467122-74467141 None:intergenic 50.0%
GCCTGAGAGAGACAAGGTTA+GGG - chr5.3:74466431-74466450 None:intergenic 50.0%
GGAACTGTCGCAGAAATCCA+AGG - chr5.3:74466148-74466167 None:intergenic 50.0%
GGCAGATGCCTTTGGTAGAT+CGG - chr5.3:74467884-74467903 None:intergenic 50.0%
TGAAGATGACACCCGAAGTG+TGG - chr5.3:74467052-74467071 None:intergenic 50.0%
TGATCCACGTGTCAATCGAG+TGG - chr5.3:74466317-74466336 None:intergenic 50.0%
TGCCTGAGAGAGACAAGGTT+AGG - chr5.3:74466432-74466451 None:intergenic 50.0%
! TTTTGGTAGGGAGGAAGGAG+AGG - chr5.3:74466062-74466081 None:intergenic 50.0%
!! GAATGCAGGTTTTGGTAGGG+AGG - chr5.3:74466071-74466090 None:intergenic 50.0%
AACAGGCACCCTGTTGAAGC+CGG - chr5.3:74466394-74466413 None:intergenic 55.0%
ACGTGGATCAATGCCGCCAT+TGG + chr5.3:74466327-74466346 MS.gene017193:CDS 55.0%
AGTCTTCTCCGAGCTCTCTC+TGG + chr5.3:74467270-74467289 MS.gene017193:CDS 55.0%
CACCCCTCGTTTCTCGCAAA+TGG + chr5.3:74466097-74466116 MS.gene017193:CDS 55.0%
CGCCATTTGCGAGAAACGAG+GGG - chr5.3:74466102-74466121 None:intergenic 55.0%
CGCTAGAACAACAGGGGGAA+TGG + chr5.3:74467845-74467864 MS.gene017193:CDS 55.0%
GAACAGGACAGCCAGAGAGA+AGG - chr5.3:74466990-74467009 None:intergenic 55.0%
GCCCTAACCTTGTCTCTCTC+AGG + chr5.3:74466427-74466446 MS.gene017193:CDS 55.0%
GCGCCATTTGCGAGAAACGA+GGG - chr5.3:74466103-74466122 None:intergenic 55.0%
GCTCGGAGAAGACTGAGTAC+AGG - chr5.3:74467264-74467283 None:intergenic 55.0%
GGGCAAGAGAAGAGGGAAAC+AGG - chr5.3:74466411-74466430 None:intergenic 55.0%
GTCAATGTCGTCATCGTCGG+AGG - chr5.3:74466001-74466020 None:intergenic 55.0%
GTTTGTGACATGGGGATCCG+AGG + chr5.3:74466650-74466669 MS.gene017193:intron 55.0%
TGACACGTGGCAGATGCCTT+TGG - chr5.3:74467892-74467911 None:intergenic 55.0%
TGCGAGATTTGCGGAGAGTG+AGG - chr5.3:74466239-74466258 None:intergenic 55.0%
TGCGCCATTTGCGAGAAACG+AGG - chr5.3:74466104-74466123 None:intergenic 55.0%
TTATCCCTGTTGGGGCGTGT+AGG - chr5.3:74466580-74466599 None:intergenic 55.0%
TTTGCGAGAAACGAGGGGTG+TGG - chr5.3:74466097-74466116 None:intergenic 55.0%
!! GCAGGTTTTGGTAGGGAGGA+AGG - chr5.3:74466067-74466086 None:intergenic 55.0%
CTCCTCGAGGTTTGGGCCAA+TGG - chr5.3:74466346-74466365 None:intergenic 60.0%
CTCGAGGTTTGGGCCAATGG+CGG - chr5.3:74466343-74466362 None:intergenic 60.0%
GACACCTACACGCCCCAACA+GGG + chr5.3:74466573-74466592 MS.gene017193:intron 60.0%
! GAGGGGTGTGGTACGAATGC+AGG - chr5.3:74466085-74466104 None:intergenic 60.0%
!! ATGGGGATCCGAGGAGTGTC+CGG + chr5.3:74466659-74466678 MS.gene017193:intron 60.0%
AGGCACCCTGTTGAAGCCGG+CGG - chr5.3:74466391-74466410 None:intergenic 65.0%
CGCCATTGGCCCAAACCTCG+AGG + chr5.3:74466341-74466360 MS.gene017193:CDS 65.0%
CTCACTCTGCTTACCGCCGC+CGG + chr5.3:74466372-74466391 MS.gene017193:CDS 65.0%
GGACACCTACACGCCCCAAC+AGG + chr5.3:74466572-74466591 MS.gene017193:intron 65.0%
!! GGATACTCCGATGGCGGAGG+CGG + chr5.3:74465966-74465985 MS.gene017193:CDS 65.0%
!! TACCGCCGCCGGCTTCAACA+GGG + chr5.3:74466383-74466402 MS.gene017193:CDS 65.0%
!! TTACCGCCGCCGGCTTCAAC+AGG + chr5.3:74466382-74466401 MS.gene017193:CDS 65.0%
CACCCTGTTGAAGCCGGCGG+CGG - chr5.3:74466388-74466407 None:intergenic 70.0%
GACTCTGCCGCCTCCGCCAT+CGG - chr5.3:74465976-74465995 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 74465964 74467927 74465964 ID=MS.gene017193
chr5.3 mRNA 74465964 74467927 74465964 ID=MS.gene017193.t1;Parent=MS.gene017193
chr5.3 exon 74465964 74466520 74465964 ID=MS.gene017193.t1.exon1;Parent=MS.gene017193.t1
chr5.3 CDS 74465964 74466520 74465964 ID=cds.MS.gene017193.t1;Parent=MS.gene017193.t1
chr5.3 exon 74466873 74467329 74466873 ID=MS.gene017193.t1.exon2;Parent=MS.gene017193.t1
chr5.3 CDS 74466873 74467329 74466873 ID=cds.MS.gene017193.t1;Parent=MS.gene017193.t1
chr5.3 exon 74467429 74467578 74467429 ID=MS.gene017193.t1.exon3;Parent=MS.gene017193.t1
chr5.3 CDS 74467429 74467578 74467429 ID=cds.MS.gene017193.t1;Parent=MS.gene017193.t1
chr5.3 exon 74467652 74467927 74467652 ID=MS.gene017193.t1.exon4;Parent=MS.gene017193.t1
chr5.3 CDS 74467652 74467927 74467652 ID=cds.MS.gene017193.t1;Parent=MS.gene017193.t1
Gene Sequence

>MS.gene017193

ATGGATACTCCGATGGCGGAGGCGGCAGAGTCAACCTCCGACGATGACGACATTGACAGAATAAACCAACTACCAAACTCCTTACTACATCACATCCTCTCCTTCCTCCCTACCAAAACCTGCATTCGTACCACACCCCTCGTTTCTCGCAAATGGCGCAATATTTGGAAGAATCTCGAAGCCTTGGATTTCTGCGACAGTTCCAGCCCCGTAATTTATGAATTCGATAACGACGAACAGTTCTTGATCTTCTCCGTTTTCGTCAACACTGTCCTCACTCTCCGCAAATCTCGCATTGTTCGGAAGTTCCGTCTCTCATGCTATCACGTTCAACTCGATCCCTTCTATAACCACTCGATTGACACGTGGATCAATGCCGCCATTGGCCCAAACCTCGAGGAGTTTCATCTCACTCTGCTTACCGCCGCCGGCTTCAACAGGGTGCCTGTTTCCCTCTTCTCTTGCCCTAACCTTGTCTCTCTCAGGCAACAATTCCTTTCATCCTTTCTTTTTGTTTTTTATCGTCAAATTCTCTATCATAGGGTAGTTAGTTTAATGTATGTAAGTTTATTAGTCTATTCAAACATACAACTGGGTCTATGAAGCACGGACACCTACACGCCCCAACAGGGATAATAATTTGAAAAAAAAGACACAATTCAGTGTAATCATAGATCTTGTGTCGTGTTTGTGACATGGGGATCCGAGGAGTGTCCGGATTAGTAAGTTGTCATGAAATAGACTCTTTTAAACATTAACAGCTTATTTCAATAGGGACTACAAATATATTTGCTTTTTTTATTTTTTATTTTTTTTATATTTGCACAGTTCAGCTGTTCTCTGATTTAGTTTAAATGAGATATGATACGTGATGATAACTTGACGTAACATTCATGTAATGTACTTCAGTTTCAATGACTATATCATTCTGCAATTGCAAGACGATTCGGAGATTTGTTTACCGTCACTGAAGTTGCTGCAACTACTAGACATGTATAATTTGGATTTAAATTCTGTGAATGTCCTTCTCTCTGGCTGTCCTGTTCTCGAAAATCTGGAAATTTCTTTTGCTCCTGAATCTTTGGCCACACTTCGGGTGTCATCTTCAACCTTGAAGAGGTTAAAAATCAATGTTGAGAATGAGGTTGGGGCTTACCTTGAAATAGACGCGCCTGATCTCAAGTACCTTAGTCTCACCAATATCACGTTTCGTGATGCTGCTTCTGTTGGGAACTTGCACAATGTGGAAGAAGCACATCTAGATGTATTTTCCACTCCTGAAAGTGAATCTGTTGAACCTGTACTCAGTCTTCTCCGAGCTCTCTCTGGAATTAAACATCTAGAGCTGCTTAGTTTAACTACAAAGGTGAGTGATTAAAGTTTTTATTATTTGTATTATATGTTGTTTTGTGCTAATTATTATTAAATAATCACTTAATCACTTGCTTTTGTCTTGTACAAGCAGTGGCTATTTGCTGCCCCTGTCTTAGATTTTCCTGAATTTCGCCACTTGCTTTATATAGAGCTTTGGTTTCTCTCTGTCAACATAAGTTTTCTGATCGACATGCTTCAAAAATGTCCTGTGCTACAAACTCTCATAACATTCAACTACAAGGTTTGTCTAGAGCTTTGTTGTGTGCGTGTATTTTTTGTTTGGATCTTACATGTGAGTTGTCCATTGTTGCCAGATGCATCCATCATTTGATTCATCACCTTCATATGAATGGGAAGTGAAGCCGAAAAGTGTTCCTAAATGTCTTGTATCCCATTTGACCTTTATTGACCTTCAAGAATATCTCGGAAATTTAAATGAGCTGGAATTTACAAGCTATGTTTTGCAAAATGGACTTGTTTTGAAGACAATGCATATTCGCAGTTTTTCGCTAGAACAACAGGGGGAATGGTTGAAAAAAATCTCCGATCTACCAAAGGCATCTGCCACGTGTCAAGTTAAATTTCACTGA

Protein sequence

>MS.gene017193.t1

MDTPMAEAAESTSDDDDIDRINQLPNSLLHHILSFLPTKTCIRTTPLVSRKWRNIWKNLEALDFCDSSSPVIYEFDNDEQFLIFSVFVNTVLTLRKSRIVRKFRLSCYHVQLDPFYNHSIDTWINAAIGPNLEEFHLTLLTAAGFNRVPVSLFSCPNLVSLRQQFLSSFLFVFYRQILYHRVVSLIFNDYIILQLQDDSEICLPSLKLLQLLDMYNLDLNSVNVLLSGCPVLENLEISFAPESLATLRVSSSTLKRLKINVENEVGAYLEIDAPDLKYLSLTNITFRDAASVGNLHNVEEAHLDVFSTPESESVEPVLSLLRALSGIKHLELLSLTTKWLFAAPVLDFPEFRHLLYIELWFLSVNISFLIDMLQKCPVLQTLITFNYKMHPSFDSSPSYEWEVKPKSVPKCLVSHLTFIDLQEYLGNLNELEFTSYVLQNGLVLKTMHIRSFSLEQQGEWLKKISDLPKASATCQVKFH