AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062526

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062526.t1 MTR_8g469020 92.105 456 36 0 1 456 1 456 0.0 853
MS.gene062526.t1 MTR_8g058965 65.778 450 151 2 7 455 13 460 0.0 571
MS.gene062526.t1 MTR_4g050250 63.366 404 135 7 5 397 19 420 3.16e-166 475
MS.gene062526.t1 MTR_8g070950 55.889 467 147 10 7 456 15 439 3.43e-160 460
MS.gene062526.t1 MTR_8g062010 54.148 458 169 7 7 455 9 434 1.72e-153 443
MS.gene062526.t1 MTR_8g062080 52.239 469 172 13 2 455 18 449 2.37e-145 422
MS.gene062526.t1 MTR_8g062310 52.423 454 167 11 7 456 25 433 1.71e-140 410
MS.gene062526.t1 MTR_8g062300 47.746 488 184 11 7 455 26 481 4.14e-128 380
MS.gene062526.t1 MTR_2g083840 44.469 452 231 7 6 451 20 457 1.95e-102 313
MS.gene062526.t1 MTR_8g467790 46.766 402 145 13 7 395 148 493 1.53e-100 310
MS.gene062526.t1 MTR_8g468810 42.275 466 221 17 7 451 25 463 7.57e-94 291
MS.gene062526.t1 MTR_4g032730 40.295 474 231 12 7 450 15 466 6.98e-93 289
MS.gene062526.t1 MTR_8g058970 41.719 477 228 17 7 451 19 477 1.35e-92 288
MS.gene062526.t1 MTR_8g062270 40.523 459 237 11 7 450 16 453 1.34e-90 283
MS.gene062526.t1 MTR_8g468840 40.929 452 241 9 7 449 14 448 5.95e-87 273
MS.gene062526.t1 MTR_8g467800 42.489 466 225 12 7 456 20 458 6.08e-87 273
MS.gene062526.t1 MTR_5g092960 38.913 460 248 8 7 450 19 461 2.77e-83 264
MS.gene062526.t1 MTR_8g014260 39.427 454 248 14 7 451 16 451 7.95e-78 249
MS.gene062526.t1 MTR_8g468760 38.780 459 217 13 7 450 9 418 1.91e-71 232
MS.gene062526.t1 MTR_8g468810 41.509 371 177 13 7 361 25 371 2.86e-68 222
MS.gene062526.t1 MTR_8g014160 37.662 462 206 19 1 451 35 425 4.35e-64 213
MS.gene062526.t1 MTR_8g445780 39.163 406 211 13 7 404 13 390 1.82e-63 210
MS.gene062526.t1 MTR_2g086020 69.863 146 44 0 311 456 175 320 3.08e-63 207
MS.gene062526.t1 MTR_2g086020 48.026 152 63 4 33 178 1 142 2.35e-32 125
MS.gene062526.t1 MTR_8g468810 42.671 307 145 9 7 305 25 308 1.44e-58 195
MS.gene062526.t1 MTR_8g468810 42.671 307 145 9 7 305 25 308 2.12e-58 195
MS.gene062526.t1 MTR_8g468810 42.671 307 145 9 7 305 25 308 3.17e-58 195
MS.gene062526.t1 MTR_5g092960 38.147 367 201 6 7 361 19 371 2.00e-56 192
MS.gene062526.t1 MTR_8g467800 41.479 311 155 8 7 311 20 309 4.20e-43 155
MS.gene062526.t1 MTR_4g024710 37.742 310 166 13 149 451 58 347 5.35e-41 149
MS.gene062526.t1 MTR_8g014210 39.574 235 130 8 222 451 4 231 7.65e-37 135
MS.gene062526.t1 MTR_5g021550 51.370 146 65 6 7 148 19 162 3.09e-33 123
MS.gene062526.t1 MTR_4g024745 36.806 288 159 11 147 429 10 279 3.69e-33 127
MS.gene062526.t1 MTR_1g041245 29.130 460 233 19 4 451 8 386 6.08e-33 129
MS.gene062526.t1 MTR_8g077460 38.462 234 122 7 7 234 10 227 6.53e-31 122
MS.gene062526.t1 MTR_8g077460 45.833 144 74 4 309 451 235 375 1.29e-29 119
MS.gene062526.t1 MTR_5g080710 29.464 448 271 17 7 443 33 446 2.38e-30 122
MS.gene062526.t1 MTR_5g084070 26.398 447 281 15 6 443 12 419 9.81e-30 120
MS.gene062526.t1 MTR_3g099800 58.621 87 35 1 363 448 19 105 6.76e-28 107
MS.gene062526.t1 MTR_3g108150 26.638 458 250 16 1 450 7 386 3.88e-26 109
MS.gene062526.t1 MTR_6g022500 29.103 457 231 16 7 451 101 476 3.60e-25 108
MS.gene062526.t1 MTR_4g024720 49.123 114 52 4 7 116 17 128 1.73e-24 100
MS.gene062526.t1 MTR_7g056433 25.991 454 255 15 5 451 10 389 1.51e-23 102
MS.gene062526.t1 MTR_8g014290 42.208 154 75 5 7 149 10 160 3.33e-23 95.9
MS.gene062526.t1 MTR_7g115270 25.877 456 262 17 4 448 9 399 4.86e-23 100
MS.gene062526.t1 MTR_7g026500 27.233 459 253 17 3 452 10 396 3.65e-21 95.5
MS.gene062526.t1 MTR_2g036470 26.316 456 254 18 5 450 12 395 5.11e-20 92.0
MS.gene062526.t1 MTR_7g032370 24.598 435 242 16 19 451 2 352 1.64e-19 90.1
MS.gene062526.t1 MTR_3g023630 25.390 449 245 18 6 448 7 371 3.51e-19 89.4
MS.gene062526.t1 MTR_7g034115 25.169 445 251 18 4 443 8 375 3.32e-18 86.7
MS.gene062526.t1 MTR_7g056447 32.381 210 109 8 4 209 6 186 5.17e-18 84.7
MS.gene062526.t1 MTR_7g033990 26.786 448 240 16 5 444 9 376 1.22e-17 85.1
MS.gene062526.t1 MTR_3g087260 26.283 487 274 16 7 450 12 456 1.56e-17 85.1
MS.gene062526.t1 MTR_1g038710 26.667 435 272 16 7 419 19 428 3.30e-17 84.0
MS.gene062526.t1 MTR_1g108820 27.434 452 248 20 4 448 5 383 5.29e-17 82.8
MS.gene062526.t1 MTR_7g032380 31.905 210 116 8 4 211 8 192 7.68e-17 82.0
MS.gene062526.t1 MTR_7g032380 30.573 157 95 4 301 451 208 356 1.78e-11 65.9
MS.gene062526.t1 MTR_2g007500 29.577 213 112 6 2 211 9 186 1.55e-16 80.9
MS.gene062526.t1 MTR_6g011460 26.293 464 235 19 7 451 46 421 4.46e-16 80.5
MS.gene062526.t1 MTR_8g014230 44.048 84 45 2 361 444 17 98 1.24e-15 72.8
MS.gene062526.t1 MTR_4g098590 24.823 423 236 15 9 418 1 354 3.70e-15 77.0
MS.gene062526.t1 MTR_7g088260 24.777 448 258 17 7 451 91 462 5.34e-15 77.4
MS.gene062526.t1 MTR_5g008920 33.014 209 109 8 7 211 9 190 7.47e-15 76.3
MS.gene062526.t1 MTR_5g073420 30.516 213 119 9 3 210 7 195 1.50e-14 75.5
MS.gene062526.t1 MTR_1g053025 25.764 458 251 20 7 448 2 386 2.22e-14 75.1
MS.gene062526.t1 MTR_4g056030 33.010 206 117 8 7 211 9 194 2.57e-14 75.1
MS.gene062526.t1 MTR_8g085430 29.358 218 118 9 4 211 8 199 2.73e-14 74.3
MS.gene062526.t1 MTR_3g107120 25.758 462 249 17 7 452 9 392 3.55e-14 74.3
MS.gene062526.t1 MTR_4g055990 27.463 477 251 21 7 419 9 454 4.45e-14 74.7
MS.gene062526.t1 MTR_7g021630 27.139 339 200 12 7 331 17 322 5.00e-14 73.6
MS.gene062526.t1 MTR_7g021630 27.139 339 200 12 7 331 17 322 5.25e-14 73.6
MS.gene062526.t1 MTR_4g039440 26.383 470 232 20 6 451 33 412 7.26e-14 73.6
MS.gene062526.t1 MTR_4g055990 27.463 477 251 21 7 419 9 454 8.41e-14 73.6
MS.gene062526.t1 MTR_2g007400 24.686 478 259 19 1 454 6 406 9.64e-14 73.2
MS.gene062526.t1 MTR_7g055943 32.381 210 112 10 5 210 38 221 9.66e-14 73.2
MS.gene062526.t1 MTR_4g080590 24.824 427 278 14 7 419 23 420 1.27e-13 73.2
MS.gene062526.t1 MTR_7g034110 30.137 219 114 9 4 213 8 196 1.66e-13 72.0
MS.gene062526.t1 MTR_7g098570 29.911 224 120 9 7 222 20 214 2.98e-13 72.0
MS.gene062526.t1 MTR_3g099830 25.322 466 222 21 5 448 10 371 6.95e-13 70.1
MS.gene062526.t1 MTR_5g008950 29.148 223 120 9 9 226 1 190 6.98e-13 70.5
MS.gene062526.t1 MTR_3g023270 26.190 336 206 15 7 333 12 314 1.26e-12 69.3
MS.gene062526.t1 MTR_2g007450 29.954 217 123 7 7 210 16 216 1.82e-12 69.3
MS.gene062526.t1 MTR_3g105060 26.126 222 133 6 4 223 11 203 2.14e-12 68.9
MS.gene062526.t1 MTR_5g087940 33.032 221 116 10 7 220 26 221 2.56e-12 68.6
MS.gene062526.t1 MTR_3g107100 32.524 206 115 8 7 211 11 193 3.56e-12 68.2
MS.gene062526.t1 MTR_5g058100 29.032 217 123 7 2 214 4 193 6.02e-12 67.4
MS.gene062526.t1 MTR_3g115430 36.937 111 64 3 342 451 20 125 6.45e-12 63.2
MS.gene062526.t1 MTR_7g075820 28.440 218 129 6 4 208 3 206 9.41e-12 67.0
MS.gene062526.t1 MTR_0543s0010 29.717 212 116 10 1 211 80 259 1.43e-11 66.6
MS.gene062526.t1 MTR_0492s0020 29.717 212 116 10 1 211 80 259 1.44e-11 66.6
MS.gene062526.t1 MTR_5g058000 30.732 205 110 9 7 207 8 184 3.60e-11 65.1
MS.gene062526.t1 MTR_2g082850 27.315 216 141 7 1 214 16 217 3.75e-11 65.1
MS.gene062526.t1 MTR_1g107385 24.622 463 258 18 5 448 30 420 4.47e-11 65.1
MS.gene062526.t1 MTR_3g040700 28.302 212 119 9 6 211 42 226 4.69e-11 65.1
MS.gene062526.t1 MTR_7g033945 31.638 177 107 7 4 176 8 174 6.29e-11 61.6
MS.gene062526.t1 MTR_5g045170 31.905 210 105 13 9 210 16 195 6.48e-11 64.3
MS.gene062526.t1 MTR_6g022360 29.952 207 106 7 6 210 42 211 7.74e-11 64.3
MS.gene062526.t1 MTR_6g022390 34.043 141 80 5 7 141 5 138 7.94e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062526.t1 AT4G10400 29.540 457 259 20 7 450 2 408 1.83e-25 108
MS.gene062526.t1 AT4G10400 29.540 457 259 20 7 450 2 408 1.83e-25 108
MS.gene062526.t1 AT4G10400 29.540 457 259 20 7 450 2 408 1.83e-25 108
MS.gene062526.t1 AT5G56420 27.056 462 275 17 7 451 6 422 2.07e-24 105
MS.gene062526.t1 AT5G56420 27.056 462 275 17 7 451 6 422 2.07e-24 105
MS.gene062526.t1 AT5G56420 27.056 462 275 17 7 451 6 422 2.07e-24 105
MS.gene062526.t1 AT1G16930 27.651 481 270 18 5 451 13 449 3.43e-24 105
MS.gene062526.t1 AT1G16930 27.651 481 270 18 5 451 13 449 3.43e-24 105
MS.gene062526.t1 AT1G16930 27.651 481 270 18 5 451 13 449 3.43e-24 105
MS.gene062526.t1 AT4G26340 27.489 462 274 16 7 451 2 419 4.67e-23 101
MS.gene062526.t1 AT5G53840 27.837 467 273 18 7 452 18 441 1.60e-22 100
MS.gene062526.t1 AT4G09920 33.624 229 127 8 7 233 2 207 4.52e-22 96.3
MS.gene062526.t1 AT4G09920 33.624 229 127 8 7 233 2 207 4.52e-22 96.3
MS.gene062526.t1 AT4G09920 33.624 229 127 8 7 233 2 207 4.52e-22 96.3
MS.gene062526.t1 AT4G09920 34.348 230 124 9 7 233 2 207 5.89e-22 96.7
MS.gene062526.t1 AT4G09920 34.348 230 124 9 7 233 2 207 5.89e-22 96.7
MS.gene062526.t1 AT5G56440 27.234 470 274 17 7 450 2 429 1.43e-19 91.3
MS.gene062526.t1 AT1G69630 25.482 467 289 17 6 448 17 448 6.50e-19 89.4
MS.gene062526.t1 AT3G50710 25.478 471 280 17 7 451 2 427 9.88e-19 88.6
MS.gene062526.t1 AT3G42770 27.373 453 287 13 9 449 1 423 1.17e-18 89.0
MS.gene062526.t1 AT5G22730 25.263 475 283 19 7 448 28 463 1.76e-18 88.2
MS.gene062526.t1 AT5G22730 25.263 475 283 19 7 448 28 463 1.76e-18 88.2
MS.gene062526.t1 AT2G26860 29.040 427 240 16 7 410 2 388 1.88e-18 87.4
MS.gene062526.t1 AT2G26860 29.040 427 240 16 7 410 2 388 1.88e-18 87.4
MS.gene062526.t1 AT3G59200 33.649 211 109 8 7 210 7 193 2.69e-18 86.7
MS.gene062526.t1 AT5G60610 26.603 421 258 15 7 415 2 383 4.43e-18 86.3
MS.gene062526.t1 AT5G60610 26.603 421 258 15 7 415 2 383 4.43e-18 86.3
MS.gene062526.t1 AT1G06630 26.902 368 232 11 7 361 12 355 4.97e-18 85.9
MS.gene062526.t1 AT1G06630 26.902 368 232 11 7 361 12 355 4.97e-18 85.9
MS.gene062526.t1 AT3G59200 32.547 212 114 7 5 210 5 193 4.98e-18 87.0
MS.gene062526.t1 AT5G22720 25.413 484 279 18 7 450 23 464 7.45e-18 86.3
MS.gene062526.t1 AT1G06630 29.565 230 143 6 7 233 12 225 7.68e-18 84.3
MS.gene062526.t1 AT4G13985 24.792 480 283 19 6 448 18 456 9.15e-18 85.9
MS.gene062526.t1 AT1G06630 26.260 377 229 13 7 364 21 367 1.32e-17 85.1
MS.gene062526.t1 AT1G06630 26.415 371 224 13 7 358 12 352 1.70e-17 84.7
MS.gene062526.t1 AT1G06630 26.415 371 224 13 7 358 12 352 1.70e-17 84.7
MS.gene062526.t1 AT1G06630 26.415 371 224 13 7 358 12 352 1.70e-17 84.7
MS.gene062526.t1 AT1G06630 26.415 371 224 13 7 358 12 352 1.70e-17 84.7
MS.gene062526.t1 AT1G06630 26.849 365 230 11 7 358 12 352 2.35e-17 84.7
MS.gene062526.t1 AT5G22610 24.894 470 285 18 7 455 18 440 2.62e-17 84.3
MS.gene062526.t1 AT3G44060 30.693 202 121 5 9 210 1 183 1.22e-16 82.0
MS.gene062526.t1 AT5G44950 25.974 462 281 21 7 442 4 430 1.41e-16 82.0
MS.gene062526.t1 AT5G56690 28.469 418 230 19 9 399 4 379 2.35e-16 81.3
MS.gene062526.t1 AT1G13780 24.160 476 300 17 4 448 7 452 3.69e-16 80.9
MS.gene062526.t1 AT3G44810 33.333 252 138 13 1 242 1 232 5.45e-16 80.5
MS.gene062526.t1 AT5G56400 24.731 465 292 17 5 451 31 455 8.34e-16 79.7
MS.gene062526.t1 AT5G56560 25.714 455 285 16 8 451 6 418 1.20e-15 79.0
MS.gene062526.t1 AT1G32375 24.625 467 284 20 7 451 2 422 1.34e-15 79.0
MS.gene062526.t1 AT1G32375 24.625 467 284 20 7 451 2 422 1.34e-15 79.0
MS.gene062526.t1 AT4G00160 27.426 474 274 21 7 453 16 446 1.68e-15 79.0
MS.gene062526.t1 AT4G00315 26.471 476 281 17 7 450 2 440 1.90e-15 78.6
MS.gene062526.t1 AT5G22610 25.051 487 293 20 7 455 18 470 2.55e-15 78.6
MS.gene062526.t1 AT5G53635 24.788 472 277 19 9 450 2 425 1.27e-14 75.9
MS.gene062526.t1 AT3G59190 32.778 180 108 5 1 175 6 177 2.15e-14 75.1
MS.gene062526.t1 AT3G59190 32.778 180 108 5 1 175 6 177 2.65e-14 75.5
MS.gene062526.t1 AT1G66310 26.383 470 271 20 6 448 18 439 2.69e-14 75.1
MS.gene062526.t1 AT4G13965 26.797 459 273 20 6 448 9 420 3.67e-14 74.7
MS.gene062526.t1 AT1G05080 25.214 468 284 17 7 450 13 438 5.96e-14 73.9
MS.gene062526.t1 AT3G60040 26.995 426 240 19 5 400 11 395 6.13e-14 74.3
MS.gene062526.t1 AT3G60040 27.123 424 238 19 7 400 233 615 6.30e-14 74.7
MS.gene062526.t1 AT3G60040 27.123 424 238 19 7 400 230 612 6.94e-14 74.3
MS.gene062526.t1 AT3G60040 27.123 424 238 19 7 400 232 614 7.46e-14 74.3
MS.gene062526.t1 AT3G60040 27.123 424 238 19 7 400 232 614 7.84e-14 74.3
MS.gene062526.t1 AT5G56410 26.498 434 257 15 14 418 10 410 8.20e-14 73.9
MS.gene062526.t1 AT5G50270 27.506 429 258 17 7 418 2 394 8.59e-14 73.2
MS.gene062526.t1 AT5G22670 25.336 446 247 17 5 413 9 405 1.05e-13 73.2
MS.gene062526.t1 AT5G44940 25.870 460 239 23 7 451 5 377 1.51e-13 72.4
MS.gene062526.t1 AT4G14103 29.707 239 136 9 7 240 8 219 3.88e-13 71.6
MS.gene062526.t1 AT4G14103 29.707 239 136 9 7 240 8 219 5.13e-13 70.9
MS.gene062526.t1 AT4G14103 29.707 239 136 9 7 240 8 219 5.13e-13 70.9
MS.gene062526.t1 AT5G22660 24.274 482 274 18 7 448 13 443 1.07e-12 70.1
MS.gene062526.t1 AT3G52680 27.479 484 259 19 7 453 21 449 1.28e-12 70.1
MS.gene062526.t1 AT1G80470 24.894 470 277 22 6 448 14 434 1.38e-12 69.7
MS.gene062526.t1 AT5G38590 24.891 458 258 19 7 436 2 401 1.43e-12 69.7
MS.gene062526.t1 AT4G15060 32.039 206 116 8 7 210 26 209 1.46e-12 69.7
MS.gene062526.t1 AT4G15060 32.524 206 115 8 7 210 172 355 1.91e-12 69.7
MS.gene062526.t1 AT5G56370 24.307 469 280 17 7 450 2 420 2.52e-12 68.9
MS.gene062526.t1 AT5G56370 24.307 469 280 17 7 450 2 420 2.52e-12 68.9
MS.gene062526.t1 AT1G64540 28.780 205 106 6 9 210 7 174 3.31e-12 68.6
MS.gene062526.t1 AT1G64540 28.780 205 106 6 9 210 7 174 3.31e-12 68.6
MS.gene062526.t1 AT5G38392 32.743 226 117 11 7 219 2 205 7.57e-12 65.1
MS.gene062526.t1 AT3G58920 24.346 497 294 20 7 451 2 468 1.10e-11 67.0
MS.gene062526.t1 AT3G58860 28.837 215 126 7 1 210 1 193 1.29e-11 67.0
MS.gene062526.t1 AT2G42720 32.547 212 112 8 7 210 2 190 1.32e-11 66.6
MS.gene062526.t1 AT3G52680 33.495 206 110 9 7 210 21 201 1.43e-11 66.2
MS.gene062526.t1 AT5G38590 27.551 294 150 13 7 279 2 253 1.99e-11 65.1
MS.gene062526.t1 AT5G18780 24.784 464 291 17 7 448 11 438 2.03e-11 66.2
MS.gene062526.t1 AT5G18780 24.784 464 291 17 7 448 11 438 2.03e-11 66.2
MS.gene062526.t1 AT4G26350 30.244 205 117 7 7 210 2 181 3.05e-11 65.5
MS.gene062526.t1 AT5G62970 23.789 454 272 16 14 429 10 427 4.22e-11 65.1
MS.gene062526.t1 AT5G22730 25.459 381 221 16 7 357 28 375 4.92e-11 64.7
MS.gene062526.t1 AT3G26922 29.808 208 113 8 7 210 14 192 5.56e-11 63.9
MS.gene062526.t1 AT3G26922 29.808 208 113 8 7 210 14 192 5.56e-11 63.9
MS.gene062526.t1 AT5G41630 28.241 216 121 9 7 210 12 205 6.98e-11 64.7
MS.gene062526.t1 AT5G41840 28.571 217 126 10 5 210 12 210 7.56e-11 64.7
MS.gene062526.t1 AT3G58880 30.328 244 135 10 6 239 2 220 7.95e-11 64.3
MS.gene062526.t1 AT1G13780 29.224 219 118 10 4 210 7 200 8.33e-11 63.5

Find 116 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTCCCATGTTCTTAA+AGG 0.198525 8.1:-44637518 None:intergenic
TGATGTAAATTGCAAAATTC+TGG 0.267891 8.1:-44637278 None:intergenic
AAACGAGATGGGTGCAATTA+AGG 0.284744 8.1:-44635838 None:intergenic
AGGTGGGATTTGAAACATTT+AGG 0.290253 8.1:-44637554 None:intergenic
TAGAACAGTTCTTGTTAGTT+AGG 0.297797 8.1:-44637697 None:intergenic
TTGGGAGGAAGGAGAGTATA+TGG 0.316717 8.1:-44635475 None:intergenic
CATCGTCGCCACGGAGGTTC+TGG 0.318754 8.1:-44635498 None:intergenic
TCATTACTTGTCTTTCTCTC+TGG 0.347561 8.1:+44636811 MS.gene062526:CDS
CTCAGCTACCTCCGAGATAA+TGG 0.363017 8.1:+44637099 MS.gene062526:CDS
TTCAAGAGGTTGAAATTAAC+CGG 0.370371 8.1:+44636907 MS.gene062526:CDS
CTGACCTTTATTCACATAGA+AGG 0.373907 8.1:+44637575 MS.gene062526:CDS
TAACCGGCGTAAATTTCTCT+TGG 0.385560 8.1:+44636923 MS.gene062526:CDS
GTAGCGATTGCTTCGAGGTA+TGG 0.388778 8.1:+44635723 MS.gene062526:CDS
AATTCTGGATAATTTAGAAC+AGG 0.399159 8.1:-44637263 None:intergenic
ATATCCTTCTATGTGAATAA+AGG 0.410094 8.1:-44637579 None:intergenic
GTATGGGTTCGTGCTGCCAT+TGG 0.410202 8.1:+44635740 MS.gene062526:CDS
CCGCCGTGAAAGTGAATTTG+TGG 0.411438 8.1:+44637068 MS.gene062526:CDS
TTAGGAACTGTTGTTGACTT+TGG 0.424286 8.1:-44637536 None:intergenic
AAAACCACATTGGGCATCAT+TGG 0.426834 8.1:+44637003 MS.gene062526:CDS
TATGGGTTCGTGCTGCCATT+GGG 0.427675 8.1:+44635741 MS.gene062526:CDS
TAGCGATTGCTTCGAGGTAT+GGG 0.432366 8.1:+44635724 MS.gene062526:CDS
GATTCAGCTGTGTCTCCATA+AGG 0.432456 8.1:+44637773 MS.gene062526:CDS
GCAAACCTTCTGAACAATCT+TGG 0.441940 8.1:-44635608 None:intergenic
ATTCACATAGAAGGATATCA+AGG 0.454447 8.1:+44637584 MS.gene062526:CDS
CAGAAGACTCATGTTGAAGC+TGG 0.456434 8.1:-44637318 None:intergenic
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8.1:-44637512 None:intergenic
ACTCACACGAAGACGGCAAA+CGG 0.461618 8.1:+44635585 MS.gene062526:CDS
TTGAATACTGCGATCAAGAC+TGG 0.461632 8.1:+44635792 MS.gene062526:CDS
CAGCTGAATCAAATTTAAGT+TGG 0.465585 8.1:-44637760 None:intergenic
AATTTCAACCTCTTGAAGAA+AGG 0.468007 8.1:-44636901 None:intergenic
AGTTTCAACATCTTCAATGA+TGG 0.468079 8.1:-44636721 None:intergenic
CTCGCAGGTGGCGAAATCTC+TGG 0.470853 8.1:+44635531 MS.gene062526:CDS
GTTTCGTAGCGATTGCTTCG+AGG 0.472167 8.1:+44635718 MS.gene062526:CDS
CCGTGTCACCTTTCTTCAAG+AGG 0.472204 8.1:+44636893 MS.gene062526:CDS
CACAAATTCACTTTCACGGC+GGG 0.472683 8.1:-44637067 None:intergenic
AGCACGGGCAAAACCACATT+GGG 0.482216 8.1:+44636994 MS.gene062526:CDS
GGAAGGAGAGTATATGGAAG+AGG 0.484769 8.1:-44635469 None:intergenic
GAAACCAGTCATCATTCAAC+AGG 0.490993 8.1:-44635700 None:intergenic
GGAGGTTCTGGTTGGGAGGA+AGG 0.491388 8.1:-44635486 None:intergenic
CTTCTATGTGAATAAAGGTC+AGG 0.500493 8.1:-44637574 None:intergenic
GTCTTGATCGCAGTATTCAA+TGG 0.501413 8.1:-44635789 None:intergenic
GTCGCCACGGAGGTTCTGGT+TGG 0.506264 8.1:-44635494 None:intergenic
GCACCCATCTCGTTTCCCTC+AGG 0.507292 8.1:+44635846 MS.gene062526:CDS
GGTCCACAAATTCACTTTCA+CGG 0.507858 8.1:-44637071 None:intergenic
TCATTGAAGATGTTGAAACT+TGG 0.513074 8.1:+44636724 MS.gene062526:CDS
AACGGCCAAGATTGTTCAGA+AGG 0.517202 8.1:+44635603 MS.gene062526:CDS
GCCGTCTTCGTGTGAGTCGT+CGG 0.517366 8.1:-44635579 None:intergenic
TCGCCACGGAGGTTCTGGTT+GGG 0.527663 8.1:-44635493 None:intergenic
GAAAGGTGACACGGGAACAT+TGG 0.528334 8.1:-44636884 None:intergenic
TCTCGGAGGTAGCTGAGCAC+AGG 0.529483 8.1:-44637093 None:intergenic
ATATGGAAGAGGAGTGGGTC+CGG 0.532379 8.1:-44635458 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8.1:+44637601 MS.gene062526:CDS
AGAGTATATGGAAGAGGAGT+GGG 0.533258 8.1:-44635463 None:intergenic
CAATCTAGAGTTTCGAGTAC+GGG 0.535175 8.1:-44636838 None:intergenic
GTTGTATATCACCATTATCT+CGG 0.540702 8.1:-44637110 None:intergenic
CGGTAGAGTGCTTAATCTGT+CGG 0.544699 8.1:-44635438 None:intergenic
ACAATCTAGAGTTTCGAGTA+CGG 0.545191 8.1:-44636839 None:intergenic
TTCTTCAAGTTGAGGCCCAA+TGG 0.546289 8.1:-44635756 None:intergenic
TATGCATCATTTCACATCAA+AGG 0.548174 8.1:+44637137 MS.gene062526:CDS
GTCATCATTCAACAGGCCGC+TGG 0.548538 8.1:-44635693 None:intergenic
GTCTTCAAATAGATTCTGAC+TGG 0.552656 8.1:+44636950 MS.gene062526:CDS
GAGAGTATATGGAAGAGGAG+TGG 0.553915 8.1:-44635464 None:intergenic
AACCATCACCTTTAAGAACA+TGG 0.553947 8.1:+44637510 MS.gene062526:CDS
CGACAGATTAAGCACTCTAC+CGG 0.566165 8.1:+44635439 MS.gene062526:CDS
CATTGGAAACTTGCAGAGTG+TGG 0.571216 8.1:+44637020 MS.gene062526:CDS
GTTACCTGAGGGAAACGAGA+TGG 0.571676 8.1:-44635850 None:intergenic
CTTAATCTGTCGGTGGTCGG+TGG 0.574102 8.1:-44635428 None:intergenic
GATGGAAGATGAATTGAAGA+AGG 0.577459 8.1:-44636703 None:intergenic
AGAAGACTCATGTTGAAGCT+GGG 0.577975 8.1:-44637317 None:intergenic
TTACCTGAGGGAAACGAGAT+GGG 0.580084 8.1:-44635849 None:intergenic
CGATGAGCCTCATCTCTCGC+AGG 0.581942 8.1:+44635516 MS.gene062526:CDS
TAATGTCGCGGGATCGACGG+AGG 0.582154 8.1:-44635655 None:intergenic
ACAAACAGTTCTTCAAGTTG+AGG 0.586776 8.1:-44635764 None:intergenic
CTCGGAGGTAGCTGAGCACA+GGG 0.592614 8.1:-44637092 None:intergenic
GTGCTTAATCTGTCGGTGGT+CGG 0.592921 8.1:-44635431 None:intergenic
CCACGGAGGTTCTGGTTGGG+AGG 0.593707 8.1:-44635490 None:intergenic
CTATGTGAATAAAGGTCAGG+TGG 0.594985 8.1:-44637571 None:intergenic
GCGGCCTGTTGAATGATGAC+TGG 0.596567 8.1:+44635696 MS.gene062526:CDS
ACCATCACCTTTAAGAACAT+GGG 0.597069 8.1:+44637511 MS.gene062526:CDS
CCTCTTGAAGAAAGGTGACA+CGG 0.598686 8.1:-44636893 None:intergenic
TGGCATCTGACAGAGCCCCT+TGG 0.599355 8.1:-44637740 None:intergenic
TCTCTTAATTCAGAGTAGCA+AGG 0.599848 8.1:+44637376 MS.gene062526:CDS
AAGATTAACTGATATACCAA+GGG 0.602286 8.1:+44637724 MS.gene062526:CDS
GAAACTTGGCGCAGGCGTTG+TGG 0.603091 8.1:+44636738 MS.gene062526:CDS
GTGCAATTAAGGAGAGAAGA+AGG 0.603494 8.1:-44635827 None:intergenic
GTAGACGACAGTCGTAGCAC+GGG 0.604782 8.1:+44636979 MS.gene062526:CDS
TGTAGACGACAGTCGTAGCA+CGG 0.604863 8.1:+44636978 MS.gene062526:CDS
TAGCACGGGCAAAACCACAT+TGG 0.607098 8.1:+44636993 MS.gene062526:CDS
AAGATGTTGAAACTTGGCGC+AGG 0.609787 8.1:+44636730 MS.gene062526:CDS
CTCTTGAAGAAAGGTGACAC+GGG 0.612206 8.1:-44636892 None:intergenic
GAAGATTAACTGATATACCA+AGG 0.613068 8.1:+44637723 MS.gene062526:CDS
AATGTCGCGGGATCGACGGA+GGG 0.613106 8.1:-44635654 None:intergenic
GGATCGACGGAGGGAGAGCA+CGG 0.617495 8.1:-44635645 None:intergenic
TTCTGGATAATTTAGAACAG+GGG 0.624941 8.1:-44637261 None:intergenic
ATTCTGGATAATTTAGAACA+GGG 0.628560 8.1:-44637262 None:intergenic
TTCGCCACCTGCGAGAGATG+AGG 0.637648 8.1:-44635523 None:intergenic
GGCGTTGTGGAATTCGACAT+AGG 0.638702 8.1:+44636751 MS.gene062526:CDS
GATGAGGCTCATCGTCGCCA+CGG 0.639596 8.1:-44635507 None:intergenic
TATGTGAATAAAGGTCAGGT+GGG 0.640734 8.1:-44637570 None:intergenic
TTTAGAACAGGGGTGCGAAG+TGG 0.642724 8.1:-44637251 None:intergenic
TGGAAACTTGCAGAGTGTGG+AGG 0.645099 8.1:+44637023 MS.gene062526:CDS
TGAGCCTCATCTCTCGCAGG+TGG 0.650631 8.1:+44635519 MS.gene062526:CDS
TGAGTCGTCGGAGAAATCGA+AGG 0.651273 8.1:-44635567 None:intergenic
GTTTCCAATGATGCCCAATG+TGG 0.653602 8.1:-44637007 None:intergenic
TTAAGAGAACTTGAAGCACA+TGG 0.655061 8.1:-44637361 None:intergenic
TCCGACGACTCACACGAAGA+CGG 0.655154 8.1:+44635578 MS.gene062526:CDS
AATCTAGAGTTTCGAGTACG+GGG 0.656709 8.1:-44636837 None:intergenic
TAGAGTGCTTAATCTGTCGG+TGG 0.661153 8.1:-44635435 None:intergenic
CCTCCCAACCAGAACCTCCG+TGG 0.670176 8.1:+44635490 MS.gene062526:CDS
GTATATCACCATTATCTCGG+AGG 0.699336 8.1:-44637107 None:intergenic
AGTCCAAGAGAAATTTACGC+CGG 0.700247 8.1:-44636926 None:intergenic
CCACAAATTCACTTTCACGG+CGG 0.708942 8.1:-44637068 None:intergenic
AGATTAACTGATATACCAAG+GGG 0.721766 8.1:+44637725 MS.gene062526:CDS
ATTCGACAACATAGACACTG+TGG 0.735102 8.1:+44636786 MS.gene062526:CDS
GAGGCTCATCGTCGCCACGG+AGG 0.755198 8.1:-44635504 None:intergenic
ATTCGACATAGGCAACACTG+TGG 0.759166 8.1:+44636762 MS.gene062526:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTTATATGCAAAATT+AGG + chr8.1:44636052-44636071 MS.gene062526:intron 10.0%
!!! GCTTTATTTAAATTAATTTT+TGG + chr8.1:44637402-44637421 MS.gene062526:intron 10.0%
!!! TTTTAATAATATCCAAAATA+TGG + chr8.1:44636567-44636586 MS.gene062526:intron 10.0%
!! TATTTACCAACATAAAAAAT+AGG - chr8.1:44636339-44636358 None:intergenic 15.0%
!! TGAAACTAAAAAAAACTAAA+AGG + chr8.1:44636264-44636283 MS.gene062526:intron 15.0%
!! TTTATAGTTTATAATGTTGT+AGG + chr8.1:44636027-44636046 MS.gene062526:intron 15.0%
!!! AGTTTTTTTTAGTTTCAAAT+TGG - chr8.1:44636261-44636280 None:intergenic 15.0%
!!! TTTATGTTGGTAAATAAAAA+TGG + chr8.1:44636343-44636362 MS.gene062526:intron 15.0%
! AAAAACTAAAAGGACTAATC+TGG + chr8.1:44636274-44636293 MS.gene062526:intron 25.0%
! AAGATTAACTGATATACCAA+GGG + chr8.1:44637724-44637743 MS.gene062526:CDS 25.0%
! ATATCCTTCTATGTGAATAA+AGG - chr8.1:44637582-44637601 None:intergenic 25.0%
! ATGCAAAATTAGGATTGAAT+TGG + chr8.1:44636062-44636081 MS.gene062526:intron 25.0%
! GAAAATGTATGTAAGTAATC+AGG + chr8.1:44636098-44636117 MS.gene062526:intron 25.0%
! TGATGTAAATTGCAAAATTC+TGG - chr8.1:44637281-44637300 None:intergenic 25.0%
! TGCAAAATTAGGATTGAATT+GGG + chr8.1:44636063-44636082 MS.gene062526:intron 25.0%
! TTGATTTAGAAACTGATCAT+GGG - chr8.1:44636463-44636482 None:intergenic 25.0%
!! AATTCTGGATAATTTAGAAC+AGG - chr8.1:44637266-44637285 None:intergenic 25.0%
!! ATTCTGGATAATTTAGAACA+GGG - chr8.1:44637265-44637284 None:intergenic 25.0%
!!! AAGGTGAAGTTTTATCATTA+TGG + chr8.1:44637156-44637175 MS.gene062526:intron 25.0%
!!! ACATTTGATTTGCCATATTT+TGG - chr8.1:44636582-44636601 None:intergenic 25.0%
!!! ATTTCGCCTATTTTTTATGT+TGG + chr8.1:44636330-44636349 MS.gene062526:intron 25.0%
!!! TTGCTATTTTTGAAAGTATG+TGG + chr8.1:44636370-44636389 MS.gene062526:intron 25.0%
AATTTCAACCTCTTGAAGAA+AGG - chr8.1:44636904-44636923 None:intergenic 30.0%
AGAATCTTGCCAAATTCTTA+AGG - chr8.1:44636543-44636562 None:intergenic 30.0%
AGATTAACTGATATACCAAG+GGG + chr8.1:44637725-44637744 MS.gene062526:CDS 30.0%
AGTTTCAACATCTTCAATGA+TGG - chr8.1:44636724-44636743 None:intergenic 30.0%
ATTCACATAGAAGGATATCA+AGG + chr8.1:44637584-44637603 MS.gene062526:CDS 30.0%
CAGCTGAATCAAATTTAAGT+TGG - chr8.1:44637763-44637782 None:intergenic 30.0%
GAAGATTAACTGATATACCA+AGG + chr8.1:44637723-44637742 MS.gene062526:CDS 30.0%
GATCAGTTTCTAAATCAACA+GGG + chr8.1:44636465-44636484 MS.gene062526:intron 30.0%
GTTGTATATCACCATTATCT+CGG - chr8.1:44637113-44637132 None:intergenic 30.0%
TAGAACAGTTCTTGTTAGTT+AGG - chr8.1:44637700-44637719 None:intergenic 30.0%
TATGCATCATTTCACATCAA+AGG + chr8.1:44637137-44637156 MS.gene062526:CDS 30.0%
TCAAATGCACCTTAAGAATT+TGG + chr8.1:44636531-44636550 MS.gene062526:intron 30.0%
TCATTGAAGATGTTGAAACT+TGG + chr8.1:44636724-44636743 MS.gene062526:CDS 30.0%
TGATCAGTTTCTAAATCAAC+AGG + chr8.1:44636464-44636483 MS.gene062526:intron 30.0%
TGTATGTAAGTAATCAGGTT+TGG + chr8.1:44636103-44636122 MS.gene062526:intron 30.0%
TTCAAGAGGTTGAAATTAAC+CGG + chr8.1:44636907-44636926 MS.gene062526:CDS 30.0%
! CGTTCTAAGTCAACTTTAAA+AGG + chr8.1:44636146-44636165 MS.gene062526:intron 30.0%
! GTTGATTTAGAAACTGATCA+TGG - chr8.1:44636464-44636483 None:intergenic 30.0%
! TTCTGGATAATTTAGAACAG+GGG - chr8.1:44637264-44637283 None:intergenic 30.0%
! TTGTAGGTTTGAAACAAACT+CGG + chr8.1:44635884-44635903 MS.gene062526:intron 30.0%
!! CATTTGCTGAATATGTTTTG+CGG + chr8.1:44637624-44637643 MS.gene062526:CDS 30.0%
!! CGGTTAAAAAGTGTTTATGT+GGG + chr8.1:44635904-44635923 MS.gene062526:intron 30.0%
!! TATTTTTGAAAGTATGTGGC+AGG + chr8.1:44636374-44636393 MS.gene062526:intron 30.0%
!! TCGGTTAAAAAGTGTTTATG+TGG + chr8.1:44635903-44635922 MS.gene062526:intron 30.0%
!!! AAACTCTCTAAGATGCATTT+TGG + chr8.1:44636307-44636326 MS.gene062526:intron 30.0%
!!! CGTTTTTTTCGATACATCAA+TGG + chr8.1:44637673-44637692 MS.gene062526:CDS 30.0%
AATTCACCGCTCTCAATAAT+AGG + chr8.1:44635953-44635972 MS.gene062526:intron 35.0%
AGAGAGAGATATACATACAC+AGG - chr8.1:44637436-44637455 None:intergenic 35.0%
ATCAACCCTATTATTGAGAG+CGG - chr8.1:44635962-44635981 None:intergenic 35.0%
ATTCACCGCTCTCAATAATA+GGG + chr8.1:44635954-44635973 MS.gene062526:intron 35.0%
CTGACCTTTATTCACATAGA+AGG + chr8.1:44637575-44637594 MS.gene062526:CDS 35.0%
CTTCTATGTGAATAAAGGTC+AGG - chr8.1:44637577-44637596 None:intergenic 35.0%
GATGGAAGATGAATTGAAGA+AGG - chr8.1:44636706-44636725 None:intergenic 35.0%
GTCTTCAAATAGATTCTGAC+TGG + chr8.1:44636950-44636969 MS.gene062526:CDS 35.0%
TATGTGAATAAAGGTCAGGT+GGG - chr8.1:44637573-44637592 None:intergenic 35.0%
TCATTACTTGTCTTTCTCTC+TGG + chr8.1:44636811-44636830 MS.gene062526:CDS 35.0%
TCTCTTAATTCAGAGTAGCA+AGG + chr8.1:44637376-44637395 MS.gene062526:CDS 35.0%
TTAAGAGAACTTGAAGCACA+TGG - chr8.1:44637364-44637383 None:intergenic 35.0%
! AACCATCACCTTTAAGAACA+TGG + chr8.1:44637510-44637529 MS.gene062526:CDS 35.0%
! ACAATCTAGAGTTTCGAGTA+CGG - chr8.1:44636842-44636861 None:intergenic 35.0%
! ACCATCACCTTTAAGAACAT+GGG + chr8.1:44637511-44637530 MS.gene062526:CDS 35.0%
! ACGAAACTTTTTAATGTCGC+GGG - chr8.1:44635669-44635688 None:intergenic 35.0%
! AGGTGGGATTTGAAACATTT+AGG - chr8.1:44637557-44637576 None:intergenic 35.0%
! CTCTCAATAATAGGGTTGAT+AGG + chr8.1:44635962-44635981 MS.gene062526:intron 35.0%
! GACGAAACTTTTTAATGTCG+CGG - chr8.1:44635670-44635689 None:intergenic 35.0%
! TGAAAAAACTGCAGTCTTGT+TGG + chr8.1:44636658-44636677 MS.gene062526:intron 35.0%
!! ACAAACAGTTCTTCAAGTTG+AGG - chr8.1:44635767-44635786 None:intergenic 35.0%
!! TGTCTTTTGTGCTAGTTTCT+TGG + chr8.1:44636861-44636880 MS.gene062526:CDS 35.0%
!! TTAGGAACTGTTGTTGACTT+TGG - chr8.1:44637539-44637558 None:intergenic 35.0%
AAAAAGTTTCGTCTCACCAG+CGG + chr8.1:44635677-44635696 MS.gene062526:CDS 40.0%
AAAACCACATTGGGCATCAT+TGG + chr8.1:44637003-44637022 MS.gene062526:CDS 40.0%
AAACGAGATGGGTGCAATTA+AGG - chr8.1:44635841-44635860 None:intergenic 40.0%
AGAAGACTCATGTTGAAGCT+GGG - chr8.1:44637320-44637339 None:intergenic 40.0%
AGAGTATATGGAAGAGGAGT+GGG - chr8.1:44635466-44635485 None:intergenic 40.0%
AGTCCAAGAGAAATTTACGC+CGG - chr8.1:44636929-44636948 None:intergenic 40.0%
ATTCGACAACATAGACACTG+TGG + chr8.1:44636786-44636805 MS.gene062526:CDS 40.0%
CAAACCTACAACAACGAGTA+GGG - chr8.1:44635875-44635894 None:intergenic 40.0%
CTATGTGAATAAAGGTCAGG+TGG - chr8.1:44637574-44637593 None:intergenic 40.0%
GAAACCAGTCATCATTCAAC+AGG - chr8.1:44635703-44635722 None:intergenic 40.0%
GCAAACCTTCTGAACAATCT+TGG - chr8.1:44635611-44635630 None:intergenic 40.0%
GCGCTTATCGATAAGTTTGT+AGG + chr8.1:44635926-44635945 MS.gene062526:intron 40.0%
GGTCCACAAATTCACTTTCA+CGG - chr8.1:44637074-44637093 None:intergenic 40.0%
GTACGCATAATCACAAGTGA+TGG - chr8.1:44637222-44637241 None:intergenic 40.0%
GTATATCACCATTATCTCGG+AGG - chr8.1:44637110-44637129 None:intergenic 40.0%
GTCTTGATCGCAGTATTCAA+TGG - chr8.1:44635792-44635811 None:intergenic 40.0%
GTGCAATTAAGGAGAGAAGA+AGG - chr8.1:44635830-44635849 None:intergenic 40.0%
TAACCGGCGTAAATTTCTCT+TGG + chr8.1:44636923-44636942 MS.gene062526:CDS 40.0%
TCAAACCTACAACAACGAGT+AGG - chr8.1:44635876-44635895 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG + chr8.1:44637601-44637620 MS.gene062526:CDS 40.0%
TCCCATGTTCTTAAAGGTGA+TGG - chr8.1:44637515-44637534 None:intergenic 40.0%
TTAGAAACTGATCATGGGAC+TGG - chr8.1:44636458-44636477 None:intergenic 40.0%
TTGAATACTGCGATCAAGAC+TGG + chr8.1:44635792-44635811 MS.gene062526:CDS 40.0%
! AATCTAGAGTTTCGAGTACG+GGG - chr8.1:44636840-44636859 None:intergenic 40.0%
! CAATCTAGAGTTTCGAGTAC+GGG - chr8.1:44636841-44636860 None:intergenic 40.0%
! GCTGAATATGTTTTGCGGAA+CGG + chr8.1:44637629-44637648 MS.gene062526:CDS 40.0%
! TTTGGCTCCCATGTTCTTAA+AGG - chr8.1:44637521-44637540 None:intergenic 40.0%
!! TTGGTGTCATAGACACTTTC+TGG + chr8.1:44636122-44636141 MS.gene062526:intron 40.0%
AACGGCCAAGATTGTTCAGA+AGG + chr8.1:44635603-44635622 MS.gene062526:CDS 45.0%
AAGATGTTGAAACTTGGCGC+AGG + chr8.1:44636730-44636749 MS.gene062526:CDS 45.0%
ATTCGACATAGGCAACACTG+TGG + chr8.1:44636762-44636781 MS.gene062526:CDS 45.0%
CACAAATTCACTTTCACGGC+GGG - chr8.1:44637070-44637089 None:intergenic 45.0%
CAGAAGACTCATGTTGAAGC+TGG - chr8.1:44637321-44637340 None:intergenic 45.0%
CAGGTACTCTGATCAAAACG+TGG + chr8.1:44636393-44636412 MS.gene062526:intron 45.0%
CATTGGAAACTTGCAGAGTG+TGG + chr8.1:44637020-44637039 MS.gene062526:CDS 45.0%
CCACAAATTCACTTTCACGG+CGG - chr8.1:44637071-44637090 None:intergenic 45.0%
CCTCTTGAAGAAAGGTGACA+CGG - chr8.1:44636896-44636915 None:intergenic 45.0%
CGACAGATTAAGCACTCTAC+CGG + chr8.1:44635439-44635458 MS.gene062526:CDS 45.0%
CTCTTGAAGAAAGGTGACAC+GGG - chr8.1:44636895-44636914 None:intergenic 45.0%
CTGATCAAAACGTGGTCACT+TGG + chr8.1:44636401-44636420 MS.gene062526:intron 45.0%
GTAACCCTACTCGTTGTTGT+AGG + chr8.1:44635868-44635887 MS.gene062526:intron 45.0%
GTGATTATGCGTACAAGCAG+TGG + chr8.1:44637228-44637247 MS.gene062526:intron 45.0%
GTTTCCAATGATGCCCAATG+TGG - chr8.1:44637010-44637029 None:intergenic 45.0%
TAGCGATTGCTTCGAGGTAT+GGG + chr8.1:44635724-44635743 MS.gene062526:CDS 45.0%
TTACCTGAGGGAAACGAGAT+GGG - chr8.1:44635852-44635871 None:intergenic 45.0%
! CGGTAGAGTGCTTAATCTGT+CGG - chr8.1:44635441-44635460 None:intergenic 45.0%
! GAGAGTATATGGAAGAGGAG+TGG - chr8.1:44635467-44635486 None:intergenic 45.0%
! GGAAGGAGAGTATATGGAAG+AGG - chr8.1:44635472-44635491 None:intergenic 45.0%
! TAGAGTGCTTAATCTGTCGG+TGG - chr8.1:44635438-44635457 None:intergenic 45.0%
! TTGGGAGGAAGGAGAGTATA+TGG - chr8.1:44635478-44635497 None:intergenic 45.0%
! TTTTAATGTCGCGGGATCGA+CGG - chr8.1:44635661-44635680 None:intergenic 45.0%
!! GGGTTGATAGGTGTATCAGT+CGG + chr8.1:44635974-44635993 MS.gene062526:intron 45.0%
!! TTCTTCAAGTTGAGGCCCAA+TGG - chr8.1:44635759-44635778 None:intergenic 45.0%
ACAACGAGTAGGGTTACCTG+AGG - chr8.1:44635865-44635884 None:intergenic 50.0%
ACTCACACGAAGACGGCAAA+CGG + chr8.1:44635585-44635604 MS.gene062526:CDS 50.0%
AGCACGGGCAAAACCACATT+GGG + chr8.1:44636994-44637013 MS.gene062526:CDS 50.0%
ATATGGAAGAGGAGTGGGTC+CGG - chr8.1:44635461-44635480 None:intergenic 50.0%
CAACGAGTAGGGTTACCTGA+GGG - chr8.1:44635864-44635883 None:intergenic 50.0%
CCGCCGTGAAAGTGAATTTG+TGG + chr8.1:44637068-44637087 MS.gene062526:CDS 50.0%
CCGTGTCACCTTTCTTCAAG+AGG + chr8.1:44636893-44636912 MS.gene062526:CDS 50.0%
CTCAGCTACCTCCGAGATAA+TGG + chr8.1:44637099-44637118 MS.gene062526:CDS 50.0%
GAAAGGTGACACGGGAACAT+TGG - chr8.1:44636887-44636906 None:intergenic 50.0%
GGCGTTGTGGAATTCGACAT+AGG + chr8.1:44636751-44636770 MS.gene062526:CDS 50.0%
GTAGCGATTGCTTCGAGGTA+TGG + chr8.1:44635723-44635742 MS.gene062526:CDS 50.0%
GTGCTTAATCTGTCGGTGGT+CGG - chr8.1:44635434-44635453 None:intergenic 50.0%
GTTACCTGAGGGAAACGAGA+TGG - chr8.1:44635853-44635872 None:intergenic 50.0%
GTTCCTCCTAGCAGCAACAA+GGG - chr8.1:44637493-44637512 None:intergenic 50.0%
GTTTCGTAGCGATTGCTTCG+AGG + chr8.1:44635718-44635737 MS.gene062526:CDS 50.0%
TAGCACGGGCAAAACCACAT+TGG + chr8.1:44636993-44637012 MS.gene062526:CDS 50.0%
TATGGGTTCGTGCTGCCATT+GGG + chr8.1:44635741-44635760 MS.gene062526:CDS 50.0%
TGAGTCGTCGGAGAAATCGA+AGG - chr8.1:44635570-44635589 None:intergenic 50.0%
TGGAAACTTGCAGAGTGTGG+AGG + chr8.1:44637023-44637042 MS.gene062526:CDS 50.0%
TGTAGACGACAGTCGTAGCA+CGG + chr8.1:44636978-44636997 MS.gene062526:CDS 50.0%
TTGTGTCCCTTGTTGCTGCT+AGG + chr8.1:44637484-44637503 MS.gene062526:intron 50.0%
! TTTAGAACAGGGGTGCGAAG+TGG - chr8.1:44637254-44637273 None:intergenic 50.0%
CTTAATCTGTCGGTGGTCGG+TGG - chr8.1:44635431-44635450 None:intergenic 55.0%
GCGGCCTGTTGAATGATGAC+TGG + chr8.1:44635696-44635715 MS.gene062526:CDS 55.0%
GGTTCCTCCTAGCAGCAACA+AGG - chr8.1:44637494-44637513 None:intergenic 55.0%
GTAGACGACAGTCGTAGCAC+GGG + chr8.1:44636979-44636998 MS.gene062526:CDS 55.0%
GTATGGGTTCGTGCTGCCAT+TGG + chr8.1:44635740-44635759 MS.gene062526:CDS 55.0%
GTCATCATTCAACAGGCCGC+TGG - chr8.1:44635696-44635715 None:intergenic 55.0%
TCCGACGACTCACACGAAGA+CGG + chr8.1:44635578-44635597 MS.gene062526:CDS 55.0%
TGTCCCTTGTTGCTGCTAGG+AGG + chr8.1:44637487-44637506 MS.gene062526:intron 55.0%
AATGTCGCGGGATCGACGGA+GGG - chr8.1:44635657-44635676 None:intergenic 60.0%
CGATGAGCCTCATCTCTCGC+AGG + chr8.1:44635516-44635535 MS.gene062526:CDS 60.0%
CTCGCAGGTGGCGAAATCTC+TGG + chr8.1:44635531-44635550 MS.gene062526:CDS 60.0%
CTCGGAGGTAGCTGAGCACA+GGG - chr8.1:44637095-44637114 None:intergenic 60.0%
GATGAGGCTCATCGTCGCCA+CGG - chr8.1:44635510-44635529 None:intergenic 60.0%
GCACCCATCTCGTTTCCCTC+AGG + chr8.1:44635846-44635865 MS.gene062526:CDS 60.0%
GCCGTCTTCGTGTGAGTCGT+CGG - chr8.1:44635582-44635601 None:intergenic 60.0%
TAATGTCGCGGGATCGACGG+AGG - chr8.1:44635658-44635677 None:intergenic 60.0%
TCTCGGAGGTAGCTGAGCAC+AGG - chr8.1:44637096-44637115 None:intergenic 60.0%
TGAGCCTCATCTCTCGCAGG+TGG + chr8.1:44635519-44635538 MS.gene062526:CDS 60.0%
TGGCATCTGACAGAGCCCCT+TGG - chr8.1:44637743-44637762 None:intergenic 60.0%
TTCGCCACCTGCGAGAGATG+AGG - chr8.1:44635526-44635545 None:intergenic 60.0%
! GAAACTTGGCGCAGGCGTTG+TGG + chr8.1:44636738-44636757 MS.gene062526:CDS 60.0%
! GGAGGTTCTGGTTGGGAGGA+AGG - chr8.1:44635489-44635508 None:intergenic 60.0%
! TCGCCACGGAGGTTCTGGTT+GGG - chr8.1:44635496-44635515 None:intergenic 60.0%
CATCGTCGCCACGGAGGTTC+TGG - chr8.1:44635501-44635520 None:intergenic 65.0%
CCTCCCAACCAGAACCTCCG+TGG + chr8.1:44635490-44635509 MS.gene062526:CDS 65.0%
GGATCGACGGAGGGAGAGCA+CGG - chr8.1:44635648-44635667 None:intergenic 65.0%
! CCACGGAGGTTCTGGTTGGG+AGG - chr8.1:44635493-44635512 None:intergenic 65.0%
! GTCGCCACGGAGGTTCTGGT+TGG - chr8.1:44635497-44635516 None:intergenic 65.0%
GAGGCTCATCGTCGCCACGG+AGG - chr8.1:44635507-44635526 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 44635422 44637793 44635422 ID=MS.gene062526
chr8.1 mRNA 44635422 44637793 44635422 ID=MS.gene062526.t1;Parent=MS.gene062526
chr8.1 exon 44635422 44635867 44635422 ID=MS.gene062526.t1.exon1;Parent=MS.gene062526.t1
chr8.1 CDS 44635422 44635867 44635422 ID=cds.MS.gene062526.t1;Parent=MS.gene062526.t1
chr8.1 exon 44636672 44637158 44636672 ID=MS.gene062526.t1.exon2;Parent=MS.gene062526.t1
chr8.1 CDS 44636672 44637158 44636672 ID=cds.MS.gene062526.t1;Parent=MS.gene062526.t1
chr8.1 exon 44637248 44637397 44637248 ID=MS.gene062526.t1.exon3;Parent=MS.gene062526.t1
chr8.1 CDS 44637248 44637397 44637248 ID=cds.MS.gene062526.t1;Parent=MS.gene062526.t1
chr8.1 exon 44637506 44637793 44637506 ID=MS.gene062526.t1.exon4;Parent=MS.gene062526.t1
chr8.1 CDS 44637506 44637793 44637506 ID=cds.MS.gene062526.t1;Parent=MS.gene062526.t1
Gene Sequence

>MS.gene062526

ATGGCGCCACCGACCACCGACAGATTAAGCACTCTACCGGACCCACTCCTCTTCCATATACTCTCCTTCCTCCCAACCAGAACCTCCGTGGCGACGATGAGCCTCATCTCTCGCAGGTGGCGAAATCTCTGGCAGAATCTACAAGCCTTCGATTTCTCCGACGACTCACACGAAGACGGCAAACGGCCAAGATTGTTCAGAAGGTTTGCATTCTTCGTCAACGCCGTGCTCTCCCTCCGTCGATCCCGCGACATTAAAAAGTTTCGTCTCACCAGCGGCCTGTTGAATGATGACTGGTTTCGTAGCGATTGCTTCGAGGTATGGGTTCGTGCTGCCATTGGGCCTCAACTTGAAGAACTGTTTGTTTCCATTGAATACTGCGATCAAGACTGGCAAGTGCTCGTTCCTTCTTCTCTCCTTAATTGCACCCATCTCGTTTCCCTCAGGTAACCCTACTCGTTGTTGTAGGTTTGAAACAAACTCGGTTAAAAAGTGTTTATGTGGGCGCTTATCGATAAGTTTGTAGGTCTAAATTCACCGCTCTCAATAATAGGGTTGATAGGTGTATCAGTCGGTTTTAGTTTGAAACAAAATTGATTACTTGATTTATAGTTTATAATGTTGTAGGTGAAAAATTTATATGCAAAATTAGGATTGAATTGGGAAACAATGAGAAGAAAATGTATGTAAGTAATCAGGTTTGGTGTCATAGACACTTTCTGGACGTTCTAAGTCAACTTTAAAAGGTTATGCAAGCACTTTTTAACAAAGTTTGATGAAAAAATGATCAATATGTTACAAAAAAGAAAATTAAATGTCTAAGTTGTTCAATTTTACCAATTTGAAACTAAAAAAAACTAAAAGGACTAATCTGGCAAAAACGTTAAACTCTCTAAGATGCATTTTGGATTTCGCCTATTTTTTATGTTGGTAAATAAAAATGGTATTTTGCTATTTTTGAAAGTATGTGGCAGGTACTCTGATCAAAACGTGGTCACTTGGTTTAGCGAGTGACAAGAGTTCTTGTTTTTGTCCAGTCCCATGATCAGTTTCTAAATCAACAGGGTACAGAAAAAGTTGTACAGTTCAGTTCTCTGTATTTTAGCAAATCAAATGCACCTTAAGAATTTGGCAAGATTCTCACGTTTTAATAATATCCAAAATATGGCAAATCAAATGTTCAGTTCTCTCTCTGTTTTTAATATGTATATATAGAATGTTATGTAACATGTGTTTTGAAAAAACTGCAGTCTTGTTGGTGCAATTCATATAATGTTTCAACCTTCTTCAATTCATCTTCCATCATTGAAGATGTTGAAACTTGGCGCAGGCGTTGTGGAATTCGACATAGGCAACACTGTGGAATTCGACAACATAGACACTGTGGATTCATTACTTGTCTTTCTCTCTGGCTGCCCCGTACTCGAAACTCTAGATTGTGTCTTTTGTGCTAGTTTCTTGGCCAATGTTCCCGTGTCACCTTTCTTCAAGAGGTTGAAATTAACCGGCGTAAATTTCTCTTGGACTCGTCTTCAAATAGATTCTGACTGGCTCTGTGTAGACGACAGTCGTAGCACGGGCAAAACCACATTGGGCATCATTGGAAACTTGCAGAGTGTGGAGGAAGCATATTTTGATGTCTTTTCCCGCCGTGAAAGTGAATTTGTGGACCCTGTGCTCAGCTACCTCCGAGATAATGGTGATATACAACTACTTATGCATCATTTCACATCAAAGGTGAAGTTTTATCATTATGGTTTATATGTATTATATATGTACTTCTGTACTAATGTTGTGCCATCACTTGTGATTATGCGTACAAGCAGTGGCCACTTCGCACCCCTGTTCTAAATTATCCAGAATTTTGCAATTTACATCATCTAAAGTTCATTCTTCCCAGCTTCAACATGAGTCTTCTGCTCAACGTGCTTGAGAAATGCCATGTGCTTCAAGTTCTCTTAATTCAGAGTAGCAAGGTTTGCTTTATTTAAATTAATTTTTGGTCTATCTACCTGTGTATGTATATCTCTCTCTCTATATACACACAAATATAATTGAGTCATTGTGTCCCTTGTTGCTGCTAGGAGGAACCATCACCTTTAAGAACATGGGAGCCAAAGTCAACAACAGTTCCTAAATGTTTCAAATCCCACCTGACCTTTATTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGCTGAATATGTTTTGCGGAACGGACTTGTTTTACACACAATGCTCGTTTTTTTCGATACATCAATGGACCTAACTAACAAGAACTGTTCTATCAGAAGATTAACTGATATACCAAGGGGCTCTGTCAGATGCCAACTTAAATTTGATTCAGCTGTGTCTCCATAA
Protein sequence

>MS.gene062526.t1

MAPPTTDRLSTLPDPLLFHILSFLPTRTSVATMSLISRRWRNLWQNLQAFDFSDDSHEDGKRPRLFRRFAFFVNAVLSLRRSRDIKKFRLTSGLLNDDWFRSDCFEVWVRAAIGPQLEELFVSIEYCDQDWQVLVPSSLLNCTHLVSLSLVGAIHIMFQPSSIHLPSLKMLKLGAGVVEFDIGNTVEFDNIDTVDSLLVFLSGCPVLETLDCVFCASFLANVPVSPFFKRLKLTGVNFSWTRLQIDSDWLCVDDSRSTGKTTLGIIGNLQSVEEAYFDVFSRRESEFVDPVLSYLRDNGDIQLLMHHFTSKWPLRTPVLNYPEFCNLHHLKFILPSFNMSLLLNVLEKCHVLQVLLIQSSKEEPSPLRTWEPKSTTVPKCFKSHLTFIHIEGYQGFEDELAFAEYVLRNGLVLHTMLVFFDTSMDLTNKNCSIRRLTDIPRGSVRCQLKFDSAVSP