Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48648.t1 | XP_013455235.1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 3.20E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48648.t1 | Q9SMS0 | 59.4 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 1.4e-69 | 264.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48648.t1 | A0A072UIK1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 2.3e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene48648 | 0.84075 | 7.21E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene48648 | 0.878973 | 1.82E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene48648 | 0.895589 | 8.30E-76 | -1.69E-46 |
| MS.gene049285 | MS.gene48648 | 0.848517 | 5.83E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene48648 | 0.852452 | 4.57E-61 | -1.69E-46 |
| MS.gene049356 | MS.gene48648 | 0.806567 | 7.73E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene48648 | 0.831319 | 1.79E-55 | -1.69E-46 |
| MS.gene049396 | MS.gene48648 | 0.90779 | 3.46E-81 | -1.69E-46 |
| MS.gene049552 | MS.gene48648 | 0.82684 | 2.17E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene48648 | 0.8905 | 9.31E-74 | -1.69E-46 |
| MS.gene049633 | MS.gene48648 | 0.852339 | 4.93E-61 | -1.69E-46 |
| MS.gene049656 | MS.gene48648 | 0.838167 | 3.38E-57 | -1.69E-46 |
| MS.gene049794 | MS.gene48648 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene48648 | 0.826909 | 2.09E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene48648 | 0.815207 | 1.04E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene48648 | 0.867885 | 9.84E-66 | -1.69E-46 |
| MS.gene050170 | MS.gene48648 | 0.891315 | 4.44E-74 | -1.69E-46 |
| MS.gene050216 | MS.gene48648 | 0.830645 | 2.61E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene48648 | 0.89402 | 3.65E-75 | -1.69E-46 |
| MS.gene050380 | MS.gene48648 | -0.802557 | 5.30E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene48648 | -0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene48648 | 0.874808 | 5.06E-68 | -1.69E-46 |
| MS.gene050499 | MS.gene48648 | 0.849134 | 3.93E-60 | -1.69E-46 |
| MS.gene050502 | MS.gene48648 | 0.915933 | 3.26E-85 | -1.69E-46 |
| MS.gene050504 | MS.gene48648 | 0.848126 | 7.47E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene48648 | 0.835454 | 1.66E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene48648 | 0.840791 | 7.03E-58 | -1.69E-46 |
| MS.gene050538 | MS.gene48648 | 0.851583 | 8.07E-61 | -1.69E-46 |
| MS.gene050577 | MS.gene48648 | 0.843291 | 1.53E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene48648 | 0.860972 | 1.42E-63 | -1.69E-46 |
| MS.gene050612 | MS.gene48648 | 0.839135 | 1.90E-57 | -1.69E-46 |
| MS.gene050662 | MS.gene48648 | 0.817988 | 2.48E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene48648 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene48648 | 0.841294 | 5.19E-58 | -1.69E-46 |
| MS.gene050686 | MS.gene48648 | 0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene050697 | MS.gene48648 | 0.844641 | 6.66E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene48648 | 0.822439 | 2.37E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene48648 | 0.904204 | 1.57E-79 | -1.69E-46 |
| MS.gene050772 | MS.gene48648 | 0.896448 | 3.65E-76 | -1.69E-46 |
| MS.gene05080 | MS.gene48648 | 0.890665 | 8.02E-74 | -1.69E-46 |
| MS.gene05081 | MS.gene48648 | 0.835038 | 2.12E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene48648 | 0.895686 | 7.57E-76 | -1.69E-46 |
| MS.gene050871 | MS.gene48648 | 0.897814 | 9.75E-77 | -1.69E-46 |
| MS.gene050904 | MS.gene48648 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene48648 | 0.899647 | 1.61E-77 | -1.69E-46 |
| MS.gene050986 | MS.gene48648 | 0.847551 | 1.08E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene48648 | 0.832821 | 7.60E-56 | -1.69E-46 |
| MS.gene05118 | MS.gene48648 | 0.803841 | 2.87E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene48648 | 0.84437 | 7.88E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene48648 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene051509 | MS.gene48648 | 0.875224 | 3.65E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene48648 | 0.836917 | 7.06E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene48648 | 0.817234 | 3.66E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene48648 | 0.852504 | 4.42E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene48648 | 0.867763 | 1.08E-65 | -1.69E-46 |
| MS.gene051874 | MS.gene48648 | 0.830457 | 2.91E-55 | -1.69E-46 |
| MS.gene051941 | MS.gene48648 | 0.860182 | 2.47E-63 | -1.69E-46 |
| MS.gene052066 | MS.gene48648 | 0.849477 | 3.15E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene48648 | 0.887537 | 1.31E-72 | -1.69E-46 |
| MS.gene052346 | MS.gene48648 | 0.883978 | 2.84E-71 | -1.69E-46 |
| MS.gene052414 | MS.gene48648 | 0.862394 | 5.23E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene48648 | 0.822782 | 1.97E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene48648 | 0.866734 | 2.30E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene48648 | 0.86927 | 3.51E-66 | -1.69E-46 |
| MS.gene052501 | MS.gene48648 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene48648 | 0.868509 | 6.20E-66 | -1.69E-46 |
| MS.gene052504 | MS.gene48648 | 0.835974 | 1.23E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene48648 | 0.82963 | 4.62E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene48648 | 0.852772 | 3.71E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene48648 | 0.840148 | 1.04E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene48648 | 0.855659 | 5.44E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene48648 | 0.866321 | 3.11E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene48648 | 0.857626 | 1.44E-62 | -1.69E-46 |
| MS.gene052872 | MS.gene48648 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene48648 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene48648 | 0.881594 | 2.11E-70 | -1.69E-46 |
| MS.gene052982 | MS.gene48648 | 0.84252 | 2.46E-58 | -1.69E-46 |
| MS.gene052987 | MS.gene48648 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene052999 | MS.gene48648 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene053018 | MS.gene48648 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene48648 | 0.80478 | 1.83E-49 | -1.69E-46 |
| MS.gene053117 | MS.gene48648 | 0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene48648 | 0.880046 | 7.57E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene48648 | 0.851758 | 7.20E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene48648 | 0.87318 | 1.80E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene48648 | 0.873849 | 1.07E-67 | -1.69E-46 |
| MS.gene053318 | MS.gene48648 | 0.845953 | 2.94E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene48648 | -0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene48648 | 0.9008 | 5.10E-78 | -1.69E-46 |
| MS.gene053449 | MS.gene48648 | 0.832171 | 1.10E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene48648 | 0.857128 | 2.02E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene48648 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene053505 | MS.gene48648 | 0.824471 | 7.93E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene48648 | 0.93633 | 2.07E-97 | -1.69E-46 |
| MS.gene053626 | MS.gene48648 | 0.909585 | 4.84E-82 | -1.69E-46 |
| MS.gene053632 | MS.gene48648 | 0.806193 | 9.26E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene48648 | 0.833936 | 4.00E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene48648 | 0.872682 | 2.64E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene48648 | 0.827768 | 1.30E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene48648 | 0.848042 | 7.89E-60 | -1.69E-46 |
| MS.gene054003 | MS.gene48648 | 0.867869 | 9.96E-66 | -1.69E-46 |
| MS.gene054408 | MS.gene48648 | 0.86666 | 2.42E-65 | -1.69E-46 |
| MS.gene054595 | MS.gene48648 | 0.883622 | 3.84E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene48648 | 0.853201 | 2.79E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene48648 | 0.840516 | 8.30E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene48648 | -0.819232 | 1.29E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene48648 | 0.832987 | 6.91E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene48648 | 0.863077 | 3.22E-64 | -1.69E-46 |
| MS.gene05494 | MS.gene48648 | 0.854906 | 9.01E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene48648 | 0.852795 | 3.65E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene48648 | 0.850351 | 1.80E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene48648 | 0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene48648 | 0.885863 | 5.63E-72 | -1.69E-46 |
| MS.gene055289 | MS.gene48648 | 0.82803 | 1.13E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene48648 | 0.846689 | 1.86E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene48648 | 0.849757 | 2.64E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene48648 | 0.877604 | 5.50E-69 | -1.69E-46 |
| MS.gene055629 | MS.gene48648 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene48648 | 0.866902 | 2.03E-65 | -1.69E-46 |
| MS.gene055741 | MS.gene48648 | 0.867831 | 1.02E-65 | -1.69E-46 |
| MS.gene055744 | MS.gene48648 | 0.859732 | 3.37E-63 | -1.69E-46 |
| MS.gene055748 | MS.gene48648 | 0.84047 | 8.53E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene48648 | 0.869385 | 3.22E-66 | -1.69E-46 |
| MS.gene055751 | MS.gene48648 | 0.839288 | 1.73E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene48648 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene48648 | 0.883182 | 5.57E-71 | -1.69E-46 |
| MS.gene055909 | MS.gene48648 | 0.863435 | 2.49E-64 | -1.69E-46 |
| MS.gene055911 | MS.gene48648 | 0.861136 | 1.27E-63 | -1.69E-46 |
| MS.gene05592 | MS.gene48648 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene48648 | 0.840518 | 8.29E-58 | -1.69E-46 |
| MS.gene05601 | MS.gene48648 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene48648 | 0.876045 | 1.91E-68 | -1.69E-46 |
| MS.gene056046 | MS.gene48648 | 0.841599 | 4.31E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene48648 | 0.923353 | 2.97E-89 | -1.69E-46 |
| MS.gene056374 | MS.gene48648 | 0.817334 | 3.48E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene48648 | 0.839371 | 1.65E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene48648 | 0.890031 | 1.42E-73 | -1.69E-46 |
| MS.gene056446 | MS.gene48648 | 0.881044 | 3.33E-70 | -1.69E-46 |
| MS.gene056448 | MS.gene48648 | 0.860003 | 2.79E-63 | -1.69E-46 |
| MS.gene056504 | MS.gene48648 | 0.896109 | 5.06E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene48648 | 0.864514 | 1.15E-64 | -1.69E-46 |
| MS.gene056511 | MS.gene48648 | 0.84054 | 8.18E-58 | -1.69E-46 |
| MS.gene05664 | MS.gene48648 | 0.819004 | 1.46E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene48648 | 0.857529 | 1.53E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene48648 | 0.840733 | 7.28E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene48648 | 0.815972 | 7.03E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene48648 | 0.844793 | 6.07E-59 | -1.69E-46 |
| MS.gene056947 | MS.gene48648 | 0.820426 | 6.90E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene48648 | 0.859412 | 4.21E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene48648 | 0.879671 | 1.03E-69 | -1.69E-46 |
| MS.gene057086 | MS.gene48648 | 0.883124 | 5.85E-71 | -1.69E-46 |
| MS.gene057331 | MS.gene48648 | 0.859998 | 2.81E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene48648 | 0.84076 | 7.16E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene48648 | 0.819333 | 1.23E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene48648 | 0.879635 | 1.06E-69 | -1.69E-46 |
| MS.gene057831 | MS.gene48648 | 0.837039 | 6.58E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene48648 | 0.817561 | 3.09E-52 | -1.69E-46 |
| MS.gene057872 | MS.gene48648 | 0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene057876 | MS.gene48648 | 0.834306 | 3.24E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene48648 | 0.908122 | 2.41E-81 | -1.69E-46 |
| MS.gene058019 | MS.gene48648 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene48648 | 0.852031 | 6.03E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene48648 | 0.876595 | 1.23E-68 | -1.69E-46 |
| MS.gene058157 | MS.gene48648 | 0.852607 | 4.13E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene48648 | 0.841812 | 3.79E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene48648 | 0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene48648 | 0.906921 | 8.84E-81 | -1.69E-46 |
| MS.gene058419 | MS.gene48648 | 0.849741 | 2.66E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene48648 | 0.842895 | 1.96E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene48648 | 0.828473 | 8.82E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene48648 | 0.847406 | 1.18E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene48648 | 0.856109 | 4.02E-62 | -1.69E-46 |
| MS.gene05883 | MS.gene48648 | 0.806193 | 9.26E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene48648 | 0.844604 | 6.82E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene48648 | 0.838855 | 2.24E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene48648 | 0.864576 | 1.10E-64 | -1.69E-46 |
| MS.gene059129 | MS.gene48648 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene48648 | 0.857988 | 1.12E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene48648 | 0.851616 | 7.90E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene48648 | 0.821629 | 3.65E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene48648 | 0.889958 | 1.52E-73 | -1.69E-46 |
| MS.gene059368 | MS.gene48648 | 0.866322 | 3.10E-65 | -1.69E-46 |
| MS.gene059455 | MS.gene48648 | 0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene48648 | 0.84859 | 5.56E-60 | -1.69E-46 |
| MS.gene059667 | MS.gene48648 | 0.911575 | 5.21E-83 | -1.69E-46 |
| MS.gene059677 | MS.gene48648 | 0.815626 | 8.39E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene48648 | 0.86393 | 1.75E-64 | -1.69E-46 |
| MS.gene059711 | MS.gene48648 | 0.81513 | 1.08E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene48648 | 0.864216 | 1.43E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene48648 | 0.830954 | 2.19E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene48648 | 0.840977 | 6.28E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene48648 | 0.888145 | 7.65E-73 | -1.69E-46 |
| MS.gene05995 | MS.gene48648 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene48648 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene48648 | 0.88425 | 2.25E-71 | -1.69E-46 |
| MS.gene06027 | MS.gene48648 | 0.809866 | 1.53E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene48648 | 0.878901 | 1.93E-69 | -1.69E-46 |
| MS.gene060482 | MS.gene48648 | 0.874686 | 5.56E-68 | -1.69E-46 |
| MS.gene060593 | MS.gene48648 | -0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene48648 | -0.81451 | 1.49E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene48648 | 0.817712 | 2.86E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene48648 | 0.838367 | 3.00E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene48648 | 0.895993 | 5.65E-76 | -1.69E-46 |
| MS.gene06077 | MS.gene48648 | 0.871578 | 6.14E-67 | -1.69E-46 |
| MS.gene060804 | MS.gene48648 | 0.820408 | 6.97E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene48648 | 0.891094 | 5.44E-74 | -1.69E-46 |
| MS.gene060837 | MS.gene48648 | 0.874571 | 6.09E-68 | -1.69E-46 |
| MS.gene06092 | MS.gene48648 | 0.863519 | 2.35E-64 | -1.69E-46 |
| MS.gene06097 | MS.gene48648 | 0.901319 | 3.02E-78 | -1.69E-46 |
| MS.gene060982 | MS.gene48648 | 0.896277 | 4.30E-76 | -1.69E-46 |
| MS.gene061150 | MS.gene48648 | 0.808562 | 2.91E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48648.t1 | MTR_4g032805 | 96.371 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 0.0 | 498 |
| MS.gene48648.t1 | MTR_2g097690 | 50.000 | 62 | 29 | 1 | 109 | 170 | 77 | 136 | 3.52e-12 | 63.9 |
| MS.gene48648.t1 | MTR_5g022180 | 36.264 | 91 | 55 | 2 | 87 | 176 | 53 | 141 | 7.03e-12 | 62.4 |
| MS.gene48648.t1 | MTR_2g097690 | 50.000 | 64 | 30 | 1 | 107 | 170 | 75 | 136 | 1.34e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48648.t1 | AT4G09350 | 59.389 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 8.25e-96 | 281 |
| MS.gene48648.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 2.68e-11 | 62.4 |
| MS.gene48648.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene48648.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene48648.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
| MS.gene48648.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
Find 39 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCCAAAAGCTTCTT+AGG | 0.196506 | 4.2:-72188591 | None:intergenic |
| CTACTATTCAATCCAATCTT+AGG | 0.223430 | 4.2:+72188357 | MS.gene48648:CDS |
| GAATATTTGTGCAGATTCTT+AGG | 0.256272 | 4.2:+72189318 | MS.gene48648:intron |
| TCTTATTCTTCTTATTGTTT+TGG | 0.269689 | 4.2:-72188385 | None:intergenic |
| GGAGAAACCTAAGAAGCTTT+TGG | 0.298843 | 4.2:+72188584 | MS.gene48648:CDS |
| TGCATTTGTTTGTTGCTGTT+TGG | 0.332246 | 4.2:-72188559 | None:intergenic |
| ATTGCTTCTACATCAGCTTC+TGG | 0.336747 | 4.2:-72189348 | None:intergenic |
| GCAAGTTCATGCTTCTACTA+AGG | 0.365942 | 4.2:+72188449 | MS.gene48648:CDS |
| GAAACTGAAAATAAAATTAG+AGG | 0.366458 | 4.2:+72189551 | MS.gene48648:CDS |
| AGAGGGAGTGAAGTTGTGTC+TGG | 0.393350 | 4.2:-72189408 | None:intergenic |
| AAGCAATCAAAGTAGCATTC+AGG | 0.395851 | 4.2:+72189364 | MS.gene48648:CDS |
| AAAGTAGAAGATTCTATGAT+TGG | 0.404469 | 4.2:+72189493 | MS.gene48648:CDS |
| TTCTTCAAGGCTACCTCATA+AGG | 0.409509 | 4.2:-72189576 | None:intergenic |
| CAAACTGTAGTGAGAGTTTG+AGG | 0.431351 | 4.2:-72188427 | None:intergenic |
| GGATTGAATAGTAGAATTTG+TGG | 0.442017 | 4.2:-72188348 | None:intergenic |
| AACAGGTTCATAATTCTTCA+AGG | 0.442631 | 4.2:-72189589 | None:intergenic |
| CCAAGACGATCAACCATGTC+TGG | 0.451377 | 4.2:-72189612 | None:intergenic |
| CGATCAACCATGTCTGGAAC+AGG | 0.460674 | 4.2:-72189606 | None:intergenic |
| GATGATGAAGGTTGGATTGG+AGG | 0.480496 | 4.2:+72188531 | MS.gene48648:CDS |
| AATAGTAGAATTTGTGGAGA+AGG | 0.498829 | 4.2:-72188342 | None:intergenic |
| AAAATTAGAGGATCCTTATG+AGG | 0.498846 | 4.2:+72189563 | MS.gene48648:CDS |
| TACATGAGTGATACAGCATA+TGG | 0.500284 | 4.2:-72189706 | None:intergenic |
| AATGATGATGAAGGTTGGAT+TGG | 0.510553 | 4.2:+72188528 | MS.gene48648:CDS |
| TGGATTCTTGTGTCAACTCC+AGG | 0.515932 | 4.2:-72188498 | None:intergenic |
| GGGAGAATGATGATGAAGGT+TGG | 0.524754 | 4.2:+72188523 | MS.gene48648:CDS |
| CTTCATCATCATTCTCCCAA+TGG | 0.525735 | 4.2:-72188518 | None:intergenic |
| GACTTGCAACTTCTTGAGCA+AGG | 0.527830 | 4.2:-72189518 | None:intergenic |
| GACATGGTTGATCGTCTTGG+TGG | 0.530101 | 4.2:+72189615 | MS.gene48648:CDS |
| CCAGACATGGTTGATCGTCT+TGG | 0.532935 | 4.2:+72189612 | MS.gene48648:CDS |
| AGTTGACACAAGAATCCATT+GGG | 0.545872 | 4.2:+72188503 | MS.gene48648:CDS |
| TTATGAACCTGTTCCAGACA+TGG | 0.570153 | 4.2:+72189599 | MS.gene48648:CDS |
| ACTTGCAACTTCTTGAGCAA+GGG | 0.574767 | 4.2:-72189517 | None:intergenic |
| AGCATTCAGGAAACTTTCAA+AGG | 0.585269 | 4.2:+72189377 | MS.gene48648:CDS |
| ACATGGTTGATCGTCTTGGT+GGG | 0.606623 | 4.2:+72189616 | MS.gene48648:CDS |
| CATTGGGAGAATGATGATGA+AGG | 0.623650 | 4.2:+72188519 | MS.gene48648:CDS |
| GAGTTGACACAAGAATCCAT+TGG | 0.644255 | 4.2:+72188502 | MS.gene48648:CDS |
| ACAGCAACAAACAAATGCAG+AGG | 0.656916 | 4.2:+72188563 | MS.gene48648:CDS |
| GCTTCTACTAAGGACACTCA+AGG | 0.674014 | 4.2:+72188459 | MS.gene48648:CDS |
| ATTCTTGTGTCAACTCCAGG+TGG | 0.739348 | 4.2:-72188495 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAGAATAAGATTTTTT+AGG | + | chr4.2:72188394-72188413 | MS.gene48648:CDS | 15.0% |
| !!! | TAGTTTAAAATTGAATTTCA+AGG | - | chr4.2:72188748-72188767 | None:intergenic | 15.0% |
| !! | GAAACTGAAAATAAAATTAG+AGG | + | chr4.2:72189551-72189570 | MS.gene48648:CDS | 20.0% |
| !!! | ATTAAATTCTGTTTTTCTTC+AGG | + | chr4.2:72189166-72189185 | MS.gene48648:intron | 20.0% |
| !!! | CGTTTTAAAAAAAGAAAAAC+TGG | + | chr4.2:72189209-72189228 | MS.gene48648:intron | 20.0% |
| !!! | TAATTTCATGAATTTTTCTG+AGG | - | chr4.2:72189442-72189461 | None:intergenic | 20.0% |
| !!! | TCTTATTCTTCTTATTGTTT+TGG | - | chr4.2:72188388-72188407 | None:intergenic | 20.0% |
| !!! | TTTATACTTTTTGTAGGAAA+CGG | - | chr4.2:72188672-72188691 | None:intergenic | 20.0% |
| ! | AAAGTAGAAGATTCTATGAT+TGG | + | chr4.2:72189493-72189512 | MS.gene48648:CDS | 25.0% |
| ! | AGACTAAAACAACTATTAGT+CGG | + | chr4.2:72189001-72189020 | MS.gene48648:intron | 25.0% |
| !! | TTATTTTCAGTTTCTCTTGT+TGG | - | chr4.2:72189545-72189564 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTATACTTTTTGT+AGG | - | chr4.2:72188678-72188697 | None:intergenic | 25.0% |
| AAAATTAGAGGATCCTTATG+AGG | + | chr4.2:72189563-72189582 | MS.gene48648:CDS | 30.0% | |
| AACAGGTTCATAATTCTTCA+AGG | - | chr4.2:72189592-72189611 | None:intergenic | 30.0% | |
| AATAGTAGAATTTGTGGAGA+AGG | - | chr4.2:72188345-72188364 | None:intergenic | 30.0% | |
| AGTTCGTATAAGTATGTGTT+TGG | + | chr4.2:72188769-72188788 | MS.gene48648:intron | 30.0% | |
| ATGTCAGAGTTTGATCAAAA+AGG | - | chr4.2:72189036-72189055 | None:intergenic | 30.0% | |
| CTACTATTCAATCCAATCTT+AGG | + | chr4.2:72188357-72188376 | MS.gene48648:CDS | 30.0% | |
| GAATATTTGTGCAGATTCTT+AGG | + | chr4.2:72189318-72189337 | MS.gene48648:intron | 30.0% | |
| GGATTGAATAGTAGAATTTG+TGG | - | chr4.2:72188351-72188370 | None:intergenic | 30.0% | |
| GGCAAAATTCAGTTTACAAT+CGG | - | chr4.2:72188727-72188746 | None:intergenic | 30.0% | |
| TCAGCTAATGTTGAATAGTT+TGG | + | chr4.2:72188949-72188968 | MS.gene48648:intron | 30.0% | |
| TGACAAGAGTTACTGAATAA+TGG | + | chr4.2:72189296-72189315 | MS.gene48648:intron | 30.0% | |
| TGATCAAACTCTGACATAAT+CGG | + | chr4.2:72189039-72189058 | MS.gene48648:intron | 30.0% | |
| TTTCTCATGATACAAATCTC+TGG | - | chr4.2:72189261-72189280 | None:intergenic | 30.0% | |
| ! | AACCACTTCGATTTTCTATT+AGG | + | chr4.2:72188700-72188719 | MS.gene48648:intron | 30.0% |
| ! | ACATAATCGGTACATGTTTT+GGG | + | chr4.2:72189052-72189071 | MS.gene48648:intron | 30.0% |
| ! | AGTTATACTTAGTGCTCTTT+TGG | - | chr4.2:72188921-72188940 | None:intergenic | 30.0% |
| ! | CGGTGGTTTTTATAAAATCA+CGG | - | chr4.2:72188892-72188911 | None:intergenic | 30.0% |
| ! | CGTGATTTTATAAAAACCAC+CGG | + | chr4.2:72188890-72188909 | MS.gene48648:intron | 30.0% |
| ! | TAGAAAATCGAAGTGGTTTT+TGG | - | chr4.2:72188698-72188717 | None:intergenic | 30.0% |
| AAGCAATCAAAGTAGCATTC+AGG | + | chr4.2:72189364-72189383 | MS.gene48648:CDS | 35.0% | |
| AGCATTCAGGAAACTTTCAA+AGG | + | chr4.2:72189377-72189396 | MS.gene48648:CDS | 35.0% | |
| AGTTGACACAAGAATCCATT+GGG | + | chr4.2:72188503-72188522 | MS.gene48648:CDS | 35.0% | |
| ATCTCTGGTAACTAGTAAGT+TGG | - | chr4.2:72189246-72189265 | None:intergenic | 35.0% | |
| GACCTAATAGAAAATCGAAG+TGG | - | chr4.2:72188705-72188724 | None:intergenic | 35.0% | |
| TACATGAGTGATACAGCATA+TGG | - | chr4.2:72189709-72189728 | None:intergenic | 35.0% | |
| TACGACTTGAGTTCAATTGT+TGG | + | chr4.2:72188973-72188992 | MS.gene48648:intron | 35.0% | |
| ! | AATGATGATGAAGGTTGGAT+TGG | + | chr4.2:72188528-72188547 | MS.gene48648:CDS | 35.0% |
| ! | GACATAATCGGTACATGTTT+TGG | + | chr4.2:72189051-72189070 | MS.gene48648:intron | 35.0% |
| ! | GAGAAACCTAAGAAGCTTTT+GGG | + | chr4.2:72188585-72188604 | MS.gene48648:CDS | 35.0% |
| ! | TGCATTTGTTTGTTGCTGTT+TGG | - | chr4.2:72188562-72188581 | None:intergenic | 35.0% |
| !! | AAAGCTTGCTTTTGTAGCTT+CGG | - | chr4.2:72188849-72188868 | None:intergenic | 35.0% |
| !!! | GCTGATTTGCTCAATTTTCA+AGG | + | chr4.2:72188618-72188637 | MS.gene48648:CDS | 35.0% |
| !!! | GTTTTGGTGTTTCCTAAGAT+TGG | - | chr4.2:72188372-72188391 | None:intergenic | 35.0% |
| !!! | TGTTTGGACTAGCTTTTACA+AGG | + | chr4.2:72188785-72188804 | MS.gene48648:intron | 35.0% |
| !!! | TTTCTGAGGCTGTTTTTAGA+GGG | - | chr4.2:72189428-72189447 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGGCTGTTTTTAG+AGG | - | chr4.2:72189429-72189448 | None:intergenic | 35.0% |
| ACAGCAACAAACAAATGCAG+AGG | + | chr4.2:72188563-72188582 | MS.gene48648:CDS | 40.0% | |
| ACTTGCAACTTCTTGAGCAA+GGG | - | chr4.2:72189520-72189539 | None:intergenic | 40.0% | |
| ATTGCTTCTACATCAGCTTC+TGG | - | chr4.2:72189351-72189370 | None:intergenic | 40.0% | |
| CAAACTGTAGTGAGAGTTTG+AGG | - | chr4.2:72188430-72188449 | None:intergenic | 40.0% | |
| CTTCATCATCATTCTCCCAA+TGG | - | chr4.2:72188521-72188540 | None:intergenic | 40.0% | |
| GAGTTGACACAAGAATCCAT+TGG | + | chr4.2:72188502-72188521 | MS.gene48648:CDS | 40.0% | |
| GCAAGTTCATGCTTCTACTA+AGG | + | chr4.2:72188449-72188468 | MS.gene48648:CDS | 40.0% | |
| TCTTCACCCAAAAGCTTCTT+AGG | - | chr4.2:72188594-72188613 | None:intergenic | 40.0% | |
| TTATGAACCTGTTCCAGACA+TGG | + | chr4.2:72189599-72189618 | MS.gene48648:CDS | 40.0% | |
| TTCTTCAAGGCTACCTCATA+AGG | - | chr4.2:72189579-72189598 | None:intergenic | 40.0% | |
| ! | CATTGGGAGAATGATGATGA+AGG | + | chr4.2:72188519-72188538 | MS.gene48648:CDS | 40.0% |
| ! | GGAGAAACCTAAGAAGCTTT+TGG | + | chr4.2:72188584-72188603 | MS.gene48648:CDS | 40.0% |
| !! | AAGCTTGCTTTTGTAGCTTC+GGG | - | chr4.2:72188848-72188867 | None:intergenic | 40.0% |
| !! | TTTTCACGTATAGCTTGCCT+CGG | - | chr4.2:72188824-72188843 | None:intergenic | 40.0% |
| !!! | TAGTGCTCTTTTGGTTTAGC+CGG | - | chr4.2:72188912-72188931 | None:intergenic | 40.0% |
| ACATGGTTGATCGTCTTGGT+GGG | + | chr4.2:72189616-72189635 | MS.gene48648:CDS | 45.0% | |
| ATTCTTGTGTCAACTCCAGG+TGG | - | chr4.2:72188498-72188517 | None:intergenic | 45.0% | |
| GACTTGCAACTTCTTGAGCA+AGG | - | chr4.2:72189521-72189540 | None:intergenic | 45.0% | |
| GCTTCTACTAAGGACACTCA+AGG | + | chr4.2:72188459-72188478 | MS.gene48648:CDS | 45.0% | |
| TGGATTCTTGTGTCAACTCC+AGG | - | chr4.2:72188501-72188520 | None:intergenic | 45.0% | |
| ! | GATGATGAAGGTTGGATTGG+AGG | + | chr4.2:72188531-72188550 | MS.gene48648:CDS | 45.0% |
| ! | GGGAGAATGATGATGAAGGT+TGG | + | chr4.2:72188523-72188542 | MS.gene48648:CDS | 45.0% |
| ! | TTTCACGTATAGCTTGCCTC+GGG | - | chr4.2:72188823-72188842 | None:intergenic | 45.0% |
| AAGGCAAATATCACGTCCCG+AGG | + | chr4.2:72188804-72188823 | MS.gene48648:intron | 50.0% | |
| AGAGGGAGTGAAGTTGTGTC+TGG | - | chr4.2:72189411-72189430 | None:intergenic | 50.0% | |
| CCAAGACGATCAACCATGTC+TGG | - | chr4.2:72189615-72189634 | None:intergenic | 50.0% | |
| CCAGACATGGTTGATCGTCT+TGG | + | chr4.2:72189612-72189631 | MS.gene48648:CDS | 50.0% | |
| GACATGGTTGATCGTCTTGG+TGG | + | chr4.2:72189615-72189634 | MS.gene48648:CDS | 50.0% | |
| ! | CGATCAACCATGTCTGGAAC+AGG | - | chr4.2:72189609-72189628 | None:intergenic | 50.0% |
| !! | ACTCCAGGTGGTGCTTTTTG+TGG | - | chr4.2:72188486-72188505 | None:intergenic | 50.0% |
| !!! | TGCTCTTTTGGTTTAGCCGG+TGG | - | chr4.2:72188909-72188928 | None:intergenic | 50.0% |
| !! | GGACCACAAAAAGCACCACC+TGG | + | chr4.2:72188480-72188499 | MS.gene48648:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 72188324 | 72189749 | 72188324 | ID=MS.gene48648 |
| chr4.2 | mRNA | 72188324 | 72189749 | 72188324 | ID=MS.gene48648.t1;Parent=MS.gene48648 |
| chr4.2 | exon | 72188324 | 72188652 | 72188324 | ID=MS.gene48648.t1.exon1;Parent=MS.gene48648.t1 |
| chr4.2 | CDS | 72188324 | 72188652 | 72188324 | ID=cds.MS.gene48648.t1;Parent=MS.gene48648.t1 |
| chr4.2 | exon | 72189332 | 72189749 | 72189332 | ID=MS.gene48648.t1.exon2;Parent=MS.gene48648.t1 |
| chr4.2 | CDS | 72189332 | 72189749 | 72189332 | ID=cds.MS.gene48648.t1;Parent=MS.gene48648.t1 |
| Gene Sequence |
| Protein sequence |
